BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium22_contig00052949
         (314 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004306008.1| PREDICTED: pentatricopeptide repeat-containi...    96   7e-18
ref|XP_007216136.1| hypothetical protein PRUPE_ppa019108mg, part...    93   3e-17
ref|XP_002272819.1| PREDICTED: pentatricopeptide repeat-containi...    93   3e-17
ref|XP_006491628.1| PREDICTED: pentatricopeptide repeat-containi...    91   2e-16
ref|XP_006447316.1| hypothetical protein CICLE_v10014508mg [Citr...    91   2e-16
gb|EXB62282.1| hypothetical protein L484_022170 [Morus notabilis]      88   1e-15
ref|XP_002517972.1| pentatricopeptide repeat-containing protein,...    85   1e-14
emb|CAN75707.1| hypothetical protein VITISV_031420 [Vitis vinifera]    82   8e-14
ref|XP_006404782.1| hypothetical protein EUTSA_v10000094mg [Eutr...    81   1e-13
ref|XP_006366001.1| PREDICTED: pentatricopeptide repeat-containi...    81   2e-13
ref|XP_002319916.2| pentatricopeptide repeat-containing family p...    79   5e-13
ref|XP_006305995.1| hypothetical protein CARUB_v10011274mg [Caps...    77   2e-12
ref|XP_004248468.1| PREDICTED: pentatricopeptide repeat-containi...    76   4e-12
ref|NP_171853.1| pentatricopeptide repeat-containing protein [Ar...    74   2e-11
ref|XP_002889462.1| pentatricopeptide repeat-containing protein ...    73   4e-11
ref|XP_007043513.1| Pentatricopeptide repeat (PPR-like) superfam...    71   1e-10
ref|XP_003595526.1| Pentatricopeptide repeat-containing protein ...    69   9e-10
ref|XP_004488287.1| PREDICTED: pentatricopeptide repeat-containi...    66   6e-09
ref|XP_004137012.1| PREDICTED: pentatricopeptide repeat-containi...    66   6e-09
ref|XP_006841755.1| hypothetical protein AMTR_s00003p00263110 [A...    65   7e-09

>ref|XP_004306008.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g03540-like [Fragaria vesca subsp. vesca]
          Length = 658

 Score = 95.5 bits (236), Expect = 7e-18
 Identities = 47/84 (55%), Positives = 62/84 (73%)
 Frame = +1

Query: 61  FYKRHYSSLPPSFLKET*QNSSTESKILHLCMSGNLSEALQLLNSTNSKKLFIKPVIFAS 240
           F+KR+Y+SL PS L +       +S+IL LC SG L +A+ LLNSTN  KL +KP+++AS
Sbjct: 6   FFKRYYTSLLPSNLPKPQNPPPKQSQILRLCKSGLLLDAIHLLNSTNPSKLTLKPLLYAS 65

Query: 241 LLHTCLKALSFNHGLQIHSHMIKS 312
           LL TC KA+S  HGLQIHSH+IK+
Sbjct: 66  LLQTCTKAVSLTHGLQIHSHVIKT 89


>ref|XP_007216136.1| hypothetical protein PRUPE_ppa019108mg, partial [Prunus persica]
           gi|462412286|gb|EMJ17335.1| hypothetical protein
           PRUPE_ppa019108mg, partial [Prunus persica]
          Length = 608

 Score = 93.2 bits (230), Expect = 3e-17
 Identities = 46/87 (52%), Positives = 65/87 (74%)
 Frame = +1

Query: 52  MRLFYKRHYSSLPPSFLKET*QNSSTESKILHLCMSGNLSEALQLLNSTNSKKLFIKPVI 231
           M+L  KRH SSL    L+ T   S  +S+IL LC  G LS+A+++LNS +S ++ +KP++
Sbjct: 1   MKLVLKRHCSSLTSLNLQSTKIPSPKQSQILRLCKLGLLSDAIRVLNSIDSGEITLKPIL 60

Query: 232 FASLLHTCLKALSFNHGLQIHSHMIKS 312
           +ASLL TC KA+SFNHGLQIH+H++KS
Sbjct: 61  YASLLQTCTKAVSFNHGLQIHAHVVKS 87


>ref|XP_002272819.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g03540-like [Vitis vinifera]
          Length = 633

 Score = 93.2 bits (230), Expect = 3e-17
 Identities = 49/88 (55%), Positives = 63/88 (71%)
 Frame = +1

Query: 49  LMRLFYKRHYSSLPPSFLKET*QNSSTESKILHLCMSGNLSEALQLLNSTNSKKLFIKPV 228
           LM+  +KR+YS L P  L +   N++  SKIL LC SG LS ALQLL S +  ++  KPV
Sbjct: 4   LMKPLFKRYYSLLTPLNLSD---NTNPFSKILQLCKSGELSGALQLLKSIDPGEISAKPV 60

Query: 229 IFASLLHTCLKALSFNHGLQIHSHMIKS 312
           ++ASLL TC K L+FNHGLQIH+H+IKS
Sbjct: 61  LYASLLQTCTKVLAFNHGLQIHAHVIKS 88


>ref|XP_006491628.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g03540-like [Citrus sinensis]
          Length = 612

 Score = 90.9 bits (224), Expect = 2e-16
 Identities = 52/89 (58%), Positives = 66/89 (74%), Gaps = 2/89 (2%)
 Frame = +1

Query: 52  MRLFYKRHYSSLPPSFLKET*QNSSTE-SKILHLCMSGNLSEALQLLNSTNSKKLFIK-P 225
           M+LF+KRH SSL      +T QNSSTE ++IL+ C SG L +A+ LLNST+    FIK P
Sbjct: 1   MKLFFKRHCSSLTTL---KTLQNSSTEVAQILNYCKSGALCDAICLLNSTDLSTAFIKKP 57

Query: 226 VIFASLLHTCLKALSFNHGLQIHSHMIKS 312
           V++ASLL TC+K  SF+ GLQIHSH+IKS
Sbjct: 58  VVYASLLQTCIKVFSFSQGLQIHSHVIKS 86


>ref|XP_006447316.1| hypothetical protein CICLE_v10014508mg [Citrus clementina]
           gi|557549927|gb|ESR60556.1| hypothetical protein
           CICLE_v10014508mg [Citrus clementina]
          Length = 668

 Score = 90.9 bits (224), Expect = 2e-16
 Identities = 52/89 (58%), Positives = 66/89 (74%), Gaps = 2/89 (2%)
 Frame = +1

Query: 52  MRLFYKRHYSSLPPSFLKET*QNSSTE-SKILHLCMSGNLSEALQLLNSTNSKKLFIK-P 225
           M+LF+KRH SSL      +T QNSSTE ++IL+ C SG L +A+ LLNST+    FIK P
Sbjct: 1   MKLFFKRHCSSLTTL---KTLQNSSTEVAQILNYCKSGALCDAICLLNSTDLSTAFIKKP 57

Query: 226 VIFASLLHTCLKALSFNHGLQIHSHMIKS 312
           V++ASLL TC+K  SF+ GLQIHSH+IKS
Sbjct: 58  VVYASLLQTCIKVFSFSQGLQIHSHVIKS 86


>gb|EXB62282.1| hypothetical protein L484_022170 [Morus notabilis]
          Length = 633

 Score = 87.8 bits (216), Expect = 1e-15
 Identities = 45/88 (51%), Positives = 62/88 (70%), Gaps = 1/88 (1%)
 Frame = +1

Query: 52  MRLFYKRHY-SSLPPSFLKET*QNSSTESKILHLCMSGNLSEALQLLNSTNSKKLFIKPV 228
           M+LF+KRH+ SSL  S L  T   S  ES+I  LC  G LS+A  +LNS +  ++ +KP 
Sbjct: 1   MKLFFKRHHCSSLSSSNLHNTKNQSHKESQIRQLCKFGALSDAFSVLNSIDPGEITVKPT 60

Query: 229 IFASLLHTCLKALSFNHGLQIHSHMIKS 312
           ++ASLL TC+KA+SF  GLQIH+H++KS
Sbjct: 61  LYASLLQTCVKAVSFKPGLQIHAHVVKS 88


>ref|XP_002517972.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223542954|gb|EEF44490.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 483

 Score = 84.7 bits (208), Expect = 1e-14
 Identities = 44/83 (53%), Positives = 57/83 (68%)
 Frame = +1

Query: 64  YKRHYSSLPPSFLKET*QNSSTESKILHLCMSGNLSEALQLLNSTNSKKLFIKPVIFASL 243
           +KRH SSLP   LK      + E KI+  C SG L  AL +LNS +S+++  KP I+ASL
Sbjct: 4   FKRHCSSLPSFNLK------NKEIKIIGFCKSGALLHALDILNSIDSREISNKPFIYASL 57

Query: 244 LHTCLKALSFNHGLQIHSHMIKS 312
           L TC K +SFNHGLQIH+H++KS
Sbjct: 58  LQTCTKVVSFNHGLQIHAHVVKS 80


>emb|CAN75707.1| hypothetical protein VITISV_031420 [Vitis vinifera]
          Length = 708

 Score = 82.0 bits (201), Expect = 8e-14
 Identities = 40/65 (61%), Positives = 50/65 (76%)
 Frame = +1

Query: 118 NSSTESKILHLCMSGNLSEALQLLNSTNSKKLFIKPVIFASLLHTCLKALSFNHGLQIHS 297
           N++  SKIL LC SG LS ALQLL S +  ++  KPV++ASLL TC K L+FNHGLQIH+
Sbjct: 83  NTNPFSKILQLCKSGELSGALQLLKSIDPGEISAKPVLYASLLQTCTKVLAFNHGLQIHA 142

Query: 298 HMIKS 312
           H+IKS
Sbjct: 143 HVIKS 147


>ref|XP_006404782.1| hypothetical protein EUTSA_v10000094mg [Eutrema salsugineum]
           gi|557105910|gb|ESQ46235.1| hypothetical protein
           EUTSA_v10000094mg [Eutrema salsugineum]
          Length = 611

 Score = 81.3 bits (199), Expect = 1e-13
 Identities = 43/89 (48%), Positives = 59/89 (66%), Gaps = 2/89 (2%)
 Frame = +1

Query: 52  MRLFYKRHYSSLPPSFLKET*QNSST--ESKILHLCMSGNLSEALQLLNSTNSKKLFIKP 225
           M L +KRH+S      L  +  +SS+  +S+IL LC SG L +A+Q+LNST S ++  KP
Sbjct: 4   MTLSWKRHFSQHSSHQLALSISSSSSTKQSRILELCKSGQLMDAIQILNSTESCEIAAKP 63

Query: 226 VIFASLLHTCLKALSFNHGLQIHSHMIKS 312
            ++ASLL TC K  SF HGLQ H H++KS
Sbjct: 64  NLYASLLQTCTKVRSFIHGLQFHGHVVKS 92


>ref|XP_006366001.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g03540-like [Solanum tuberosum]
          Length = 597

 Score = 80.9 bits (198), Expect = 2e-13
 Identities = 41/87 (47%), Positives = 63/87 (72%)
 Frame = +1

Query: 52  MRLFYKRHYSSLPPSFLKET*QNSSTESKILHLCMSGNLSEALQLLNSTNSKKLFIKPVI 231
           ++LF  RHYSS+  +F        S ES+I+HLC SG LS+A++LL +T  +K+  KP++
Sbjct: 3   LKLFVHRHYSSV--TFFTNP---PSKESEIIHLCRSGLLSQAIKLLKTT--EKISSKPIV 55

Query: 232 FASLLHTCLKALSFNHGLQIHSHMIKS 312
           +A+L+ TC K+ SFNHG+Q H+H+IK+
Sbjct: 56  YATLIQTCTKSHSFNHGVQFHTHVIKT 82


>ref|XP_002319916.2| pentatricopeptide repeat-containing family protein [Populus
           trichocarpa] gi|550325822|gb|EEE95839.2|
           pentatricopeptide repeat-containing family protein
           [Populus trichocarpa]
          Length = 606

 Score = 79.3 bits (194), Expect = 5e-13
 Identities = 41/82 (50%), Positives = 52/82 (63%)
 Frame = +1

Query: 67  KRHYSSLPPSFLKET*QNSSTESKILHLCMSGNLSEALQLLNSTNSKKLFIKPVIFASLL 246
           +RHYS+L    LK      S   KI+  C SG+L EA+ +LNS +  +L  KP  +ASLL
Sbjct: 8   QRHYSTLASLNLKTLENPQSKAYKIIQYCKSGSLFEAIHVLNSIDWTRLSNKPFFYASLL 67

Query: 247 HTCLKALSFNHGLQIHSHMIKS 312
            TC KA+SF HG+Q HSH IKS
Sbjct: 68  QTCTKAVSFTHGIQFHSHAIKS 89


>ref|XP_006305995.1| hypothetical protein CARUB_v10011274mg [Capsella rubella]
           gi|482574706|gb|EOA38893.1| hypothetical protein
           CARUB_v10011274mg [Capsella rubella]
          Length = 608

 Score = 77.0 bits (188), Expect = 2e-12
 Identities = 33/63 (52%), Positives = 48/63 (76%)
 Frame = +1

Query: 121 SSTESKILHLCMSGNLSEALQLLNSTNSKKLFIKPVIFASLLHTCLKALSFNHGLQIHSH 300
           +ST+S+IL LC SG L++A+++LNST S  +  KP ++A+LL TC K  SF HGLQ H+H
Sbjct: 26  ASTQSRILELCKSGRLTDAIRILNSTESSGISAKPNLYAALLQTCTKVFSFTHGLQFHAH 85

Query: 301 MIK 309
           ++K
Sbjct: 86  VVK 88


>ref|XP_004248468.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g03540-like [Solanum lycopersicum]
          Length = 597

 Score = 76.3 bits (186), Expect = 4e-12
 Identities = 40/87 (45%), Positives = 61/87 (70%)
 Frame = +1

Query: 52  MRLFYKRHYSSLPPSFLKET*QNSSTESKILHLCMSGNLSEALQLLNSTNSKKLFIKPVI 231
           ++L   RHYSS+  +F        S ES+I+HLC S  LS+A++LL ST  +K+  KP++
Sbjct: 3   LKLLGHRHYSSV--TFFTNP---PSKESEIIHLCRSDLLSQAIKLLKST--EKISSKPIV 55

Query: 232 FASLLHTCLKALSFNHGLQIHSHMIKS 312
           +A+L+ TC K+ SFNHG+Q H+H+IK+
Sbjct: 56  YATLIQTCTKSHSFNHGVQFHTHVIKT 82


>ref|NP_171853.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75180299|sp|Q9LR69.1|PPR8_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At1g03540 gi|9280645|gb|AAF86514.1|AC002560_7 F21B7.16
           [Arabidopsis thaliana] gi|91805735|gb|ABE65596.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana] gi|332189463|gb|AEE27584.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 609

 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 37/87 (42%), Positives = 57/87 (65%), Gaps = 2/87 (2%)
 Frame = +1

Query: 58  LFYKRHYSSLPPSFLKET*QNSST--ESKILHLCMSGNLSEALQLLNSTNSKKLFIKPVI 231
           +  KRH+S      L  +  +S+   +S+IL LC  G L+EA+++LNST+S ++   P +
Sbjct: 4   IILKRHFSQHASLCLTPSISSSAPTKQSRILELCKLGQLTEAIRILNSTHSSEIPATPKL 63

Query: 232 FASLLHTCLKALSFNHGLQIHSHMIKS 312
           +ASLL TC K  SF HG+Q H+H++KS
Sbjct: 64  YASLLQTCNKVFSFIHGIQFHAHVVKS 90


>ref|XP_002889462.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297335304|gb|EFH65721.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 608

 Score = 73.2 bits (178), Expect = 4e-11
 Identities = 41/91 (45%), Positives = 58/91 (63%), Gaps = 4/91 (4%)
 Frame = +1

Query: 52  MRLFYKRHYSSLPPSFLKET*QNSST----ESKILHLCMSGNLSEALQLLNSTNSKKLFI 219
           M L  KR +S      L  T  NSS+    +S+IL LC  G L++A+++LNST+S ++  
Sbjct: 1   MNLILKRQFSRHASLCL--TPSNSSSAPTKQSRILELCKLGQLTDAIRILNSTHSSEISA 58

Query: 220 KPVIFASLLHTCLKALSFNHGLQIHSHMIKS 312
           K  ++ASLL TC K  SF HGLQ H+H++KS
Sbjct: 59  KSNLYASLLQTCRKVFSFIHGLQFHAHVVKS 89


>ref|XP_007043513.1| Pentatricopeptide repeat (PPR-like) superfamily protein [Theobroma
           cacao] gi|508707448|gb|EOX99344.1| Pentatricopeptide
           repeat (PPR-like) superfamily protein [Theobroma cacao]
          Length = 638

 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 43/97 (44%), Positives = 57/97 (58%), Gaps = 9/97 (9%)
 Frame = +1

Query: 49  LMRLFYKRH---YSSLPPSFLKET*QNSSTESKILHLCMSGNLSEALQLLNS------TN 201
           L   F+KRH   ++S  P+F  +T   S   S+ILH C S  L  A+ LLN+      T 
Sbjct: 3   LFFFFFKRHRCSFASFNPTFPSKT--PSDKHSQILHFCKSAQLFPAIHLLNTLHFPSETT 60

Query: 202 SKKLFIKPVIFASLLHTCLKALSFNHGLQIHSHMIKS 312
           S K   KP+++ASLL TC    SF+HGLQ H+H+IKS
Sbjct: 61  SSK---KPLLYASLLQTCTNVQSFSHGLQFHAHVIKS 94


>ref|XP_003595526.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355484574|gb|AES65777.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 229

 Score = 68.6 bits (166), Expect = 9e-10
 Identities = 38/82 (46%), Positives = 56/82 (68%)
 Frame = +1

Query: 67  KRHYSSLPPSFLKET*QNSSTESKILHLCMSGNLSEALQLLNSTNSKKLFIKPVIFASLL 246
           K+ +  LP   +K+T    ST+S+ILH   +G+LS A+ LLN T+   L +KPVI+ASLL
Sbjct: 2   KKLHHHLP---VKQTHSFISTDSEILHHLKTGSLSHAIHLLN-TSQPTLSLKPVIYASLL 57

Query: 247 HTCLKALSFNHGLQIHSHMIKS 312
            T +K  SF+HG  +H+H++KS
Sbjct: 58  QTSVKTNSFHHGASVHAHVLKS 79


>ref|XP_004488287.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g03540-like isoform X1 [Cicer arietinum]
           gi|502086668|ref|XP_004488288.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At1g03540-like isoform X2 [Cicer arietinum]
           gi|502086671|ref|XP_004488289.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At1g03540-like isoform X3 [Cicer arietinum]
          Length = 612

 Score = 65.9 bits (159), Expect = 6e-09
 Identities = 33/60 (55%), Positives = 44/60 (73%)
 Frame = +1

Query: 133 SKILHLCMSGNLSEALQLLNSTNSKKLFIKPVIFASLLHTCLKALSFNHGLQIHSHMIKS 312
           S+IL L  +G LSE++ LLN T+   L +KPVI+ASLL TC+K  SF HG  +H+H+IKS
Sbjct: 23  SQILQLLKNGELSESIHLLN-TSQPPLSLKPVIYASLLQTCVKTSSFLHGTSVHAHVIKS 81


>ref|XP_004137012.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g03540-like [Cucumis sativus]
           gi|449493172|ref|XP_004159212.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At1g03540-like [Cucumis sativus]
          Length = 605

 Score = 65.9 bits (159), Expect = 6e-09
 Identities = 42/92 (45%), Positives = 56/92 (60%), Gaps = 5/92 (5%)
 Frame = +1

Query: 52  MRLFYKRHYSSLPPSFLKET*QNSSTES----KILHLCMSGNLSEALQLLNSTNSKKLFI 219
           M LF KRH SS   SF  +  + S+  S    +IL  C SG L++AL LLNS +     I
Sbjct: 1   MMLFLKRHCSS---SFTSQNFKYSTHPSIKLSQILQFCKSGLLNDALHLLNSIDLYDSRI 57

Query: 220 -KPVIFASLLHTCLKALSFNHGLQIHSHMIKS 312
            KP+++ASLL TC+K  SF  G Q H+H++KS
Sbjct: 58  NKPLLYASLLQTCIKVDSFTRGRQFHAHVVKS 89


>ref|XP_006841755.1| hypothetical protein AMTR_s00003p00263110 [Amborella trichopoda]
           gi|548843776|gb|ERN03430.1| hypothetical protein
           AMTR_s00003p00263110 [Amborella trichopoda]
          Length = 656

 Score = 65.5 bits (158), Expect = 7e-09
 Identities = 37/86 (43%), Positives = 51/86 (59%)
 Frame = +1

Query: 52  MRLFYKRHYSSLPPSFLKET*QNSSTESKILHLCMSGNLSEALQLLNSTNSKKLFIKPVI 231
           MR  + RHY++        T   +S   +I+ LC SG LS++L+LL S N  K+  KP+I
Sbjct: 1   MRSLFHRHYTTSI-----NTSDPNSLVLEIIDLCKSGFLSQSLKLLRSLNPLKIAKKPII 55

Query: 232 FASLLHTCLKALSFNHGLQIHSHMIK 309
           +ASLL  C K LS   G  +HSH+IK
Sbjct: 56  YASLLQACAKNLSLRQGNALHSHIIK 81