BLASTX nr result
ID: Sinomenium22_contig00052863
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium22_contig00052863
(307 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002279821.1| PREDICTED: pentatricopeptide repeat-containi... 46 6e-08
emb|CBI36158.3| unnamed protein product [Vitis vinifera] 46 6e-08
ref|XP_007024106.1| Pentatricopeptide repeat (PPR-like) superfam... 46 8e-08
ref|XP_007216985.1| hypothetical protein PRUPE_ppa002680mg [Prun... 46 1e-07
ref|XP_003542104.1| PREDICTED: pentatricopeptide repeat-containi... 42 2e-06
ref|XP_006478024.1| PREDICTED: pentatricopeptide repeat-containi... 41 2e-06
ref|XP_004157025.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 40 2e-06
ref|XP_004151539.1| PREDICTED: pentatricopeptide repeat-containi... 40 2e-06
ref|XP_002299640.2| hypothetical protein POPTR_0001s18030g [Popu... 40 3e-06
gb|EYU21550.1| hypothetical protein MIMGU_mgv1a002764mg [Mimulus... 43 4e-06
ref|XP_003597780.1| Beta-D-galactosidase [Medicago truncatula] g... 43 4e-06
ref|XP_006441042.1| hypothetical protein CICLE_v10023415mg [Citr... 40 4e-06
ref|XP_006346579.1| PREDICTED: pentatricopeptide repeat-containi... 41 5e-06
ref|XP_004486725.1| PREDICTED: pentatricopeptide repeat-containi... 42 8e-06
ref|XP_007150666.1| hypothetical protein PHAVU_005G171500g [Phas... 43 8e-06
>ref|XP_002279821.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g16010-like [Vitis vinifera]
Length = 725
Score = 46.2 bits (108), Expect(2) = 6e-08
Identities = 20/32 (62%), Positives = 26/32 (81%)
Frame = -2
Query: 147 DIGVKIQFWKTIQDMVHSNCVIGPAELSEIVR 52
+ G+ + WKTIQ+MV S CVIGPA+LSEIV+
Sbjct: 136 EAGMLGEMWKTIQEMVRSTCVIGPADLSEIVK 167
Score = 36.2 bits (82), Expect(2) = 6e-08
Identities = 16/17 (94%), Positives = 17/17 (100%)
Frame = -1
Query: 52 GKAKMVNKALSVFYQIK 2
GKAKMVNKALS+FYQIK
Sbjct: 170 GKAKMVNKALSIFYQIK 186
>emb|CBI36158.3| unnamed protein product [Vitis vinifera]
Length = 638
Score = 46.2 bits (108), Expect(2) = 6e-08
Identities = 20/32 (62%), Positives = 26/32 (81%)
Frame = -2
Query: 147 DIGVKIQFWKTIQDMVHSNCVIGPAELSEIVR 52
+ G+ + WKTIQ+MV S CVIGPA+LSEIV+
Sbjct: 136 EAGMLGEMWKTIQEMVRSTCVIGPADLSEIVK 167
Score = 36.2 bits (82), Expect(2) = 6e-08
Identities = 16/17 (94%), Positives = 17/17 (100%)
Frame = -1
Query: 52 GKAKMVNKALSVFYQIK 2
GKAKMVNKALS+FYQIK
Sbjct: 170 GKAKMVNKALSIFYQIK 186
>ref|XP_007024106.1| Pentatricopeptide repeat (PPR-like) superfamily protein isoform 1
[Theobroma cacao] gi|590618658|ref|XP_007024107.1|
Pentatricopeptide repeat (PPR-like) superfamily protein
isoform 1 [Theobroma cacao]
gi|590618661|ref|XP_007024108.1| Pentatricopeptide
repeat (PPR-like) superfamily protein isoform 1
[Theobroma cacao] gi|590618664|ref|XP_007024109.1|
Pentatricopeptide repeat (PPR-like) superfamily protein
isoform 1 [Theobroma cacao]
gi|590618669|ref|XP_007024110.1| Pentatricopeptide
repeat (PPR-like) superfamily protein isoform 1
[Theobroma cacao] gi|590618672|ref|XP_007024111.1|
Pentatricopeptide repeat (PPR-like) superfamily protein
isoform 1 [Theobroma cacao] gi|508779472|gb|EOY26728.1|
Pentatricopeptide repeat (PPR-like) superfamily protein
isoform 1 [Theobroma cacao] gi|508779473|gb|EOY26729.1|
Pentatricopeptide repeat (PPR-like) superfamily protein
isoform 1 [Theobroma cacao] gi|508779474|gb|EOY26730.1|
Pentatricopeptide repeat (PPR-like) superfamily protein
isoform 1 [Theobroma cacao] gi|508779475|gb|EOY26731.1|
Pentatricopeptide repeat (PPR-like) superfamily protein
isoform 1 [Theobroma cacao] gi|508779476|gb|EOY26732.1|
Pentatricopeptide repeat (PPR-like) superfamily protein
isoform 1 [Theobroma cacao] gi|508779477|gb|EOY26733.1|
Pentatricopeptide repeat (PPR-like) superfamily protein
isoform 1 [Theobroma cacao]
Length = 636
Score = 45.8 bits (107), Expect(2) = 8e-08
Identities = 20/32 (62%), Positives = 25/32 (78%)
Frame = -2
Query: 147 DIGVKIQFWKTIQDMVHSNCVIGPAELSEIVR 52
+ G+ + WKTIQ+M+ S C IGPAELSEIVR
Sbjct: 134 EAGLVGEMWKTIQEMLRSTCAIGPAELSEIVR 165
Score = 36.2 bits (82), Expect(2) = 8e-08
Identities = 16/17 (94%), Positives = 17/17 (100%)
Frame = -1
Query: 52 GKAKMVNKALSVFYQIK 2
GKAKMVNKALS+FYQIK
Sbjct: 168 GKAKMVNKALSIFYQIK 184
>ref|XP_007216985.1| hypothetical protein PRUPE_ppa002680mg [Prunus persica]
gi|462413135|gb|EMJ18184.1| hypothetical protein
PRUPE_ppa002680mg [Prunus persica]
Length = 645
Score = 45.8 bits (107), Expect(2) = 1e-07
Identities = 20/32 (62%), Positives = 25/32 (78%)
Frame = -2
Query: 147 DIGVKIQFWKTIQDMVHSNCVIGPAELSEIVR 52
+ GV + WKTIQ+M+ S CVI PAELSEI+R
Sbjct: 136 EAGVVGEMWKTIQEMIRSTCVIEPAELSEIIR 167
Score = 35.4 bits (80), Expect(2) = 1e-07
Identities = 16/17 (94%), Positives = 17/17 (100%)
Frame = -1
Query: 52 GKAKMVNKALSVFYQIK 2
G+AKMVNKALSVFYQIK
Sbjct: 170 GRAKMVNKALSVFYQIK 186
>ref|XP_003542104.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g16010-like isoform X1 [Glycine max]
Length = 631
Score = 42.4 bits (98), Expect(2) = 2e-06
Identities = 18/26 (69%), Positives = 21/26 (80%)
Frame = -2
Query: 129 QFWKTIQDMVHSNCVIGPAELSEIVR 52
+ WKTIQDMV +C + PAELSEIVR
Sbjct: 136 EVWKTIQDMVKGSCAMAPAELSEIVR 161
Score = 35.0 bits (79), Expect(2) = 2e-06
Identities = 15/17 (88%), Positives = 17/17 (100%)
Frame = -1
Query: 52 GKAKMVNKALSVFYQIK 2
GKAKMVN+ALSVFYQ+K
Sbjct: 164 GKAKMVNRALSVFYQVK 180
>ref|XP_006478024.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g16010-like isoform X1 [Citrus sinensis]
gi|568848458|ref|XP_006478025.1| PREDICTED:
pentatricopeptide repeat-containing protein
At3g16010-like isoform X2 [Citrus sinensis]
gi|568848460|ref|XP_006478026.1| PREDICTED:
pentatricopeptide repeat-containing protein
At3g16010-like isoform X3 [Citrus sinensis]
gi|568848462|ref|XP_006478027.1| PREDICTED:
pentatricopeptide repeat-containing protein
At3g16010-like isoform X4 [Citrus sinensis]
gi|568848464|ref|XP_006478028.1| PREDICTED:
pentatricopeptide repeat-containing protein
At3g16010-like isoform X5 [Citrus sinensis]
gi|568848466|ref|XP_006478029.1| PREDICTED:
pentatricopeptide repeat-containing protein
At3g16010-like isoform X6 [Citrus sinensis]
gi|568848468|ref|XP_006478030.1| PREDICTED:
pentatricopeptide repeat-containing protein
At3g16010-like isoform X7 [Citrus sinensis]
gi|568848470|ref|XP_006478031.1| PREDICTED:
pentatricopeptide repeat-containing protein
At3g16010-like isoform X8 [Citrus sinensis]
gi|568848472|ref|XP_006478032.1| PREDICTED:
pentatricopeptide repeat-containing protein
At3g16010-like isoform X9 [Citrus sinensis]
Length = 638
Score = 40.8 bits (94), Expect(2) = 2e-06
Identities = 17/25 (68%), Positives = 21/25 (84%)
Frame = -2
Query: 129 QFWKTIQDMVHSNCVIGPAELSEIV 55
+ WK+IQDMV S CV+GP+ LSEIV
Sbjct: 143 EMWKSIQDMVRSTCVMGPSVLSEIV 167
Score = 36.2 bits (82), Expect(2) = 2e-06
Identities = 16/17 (94%), Positives = 17/17 (100%)
Frame = -1
Query: 52 GKAKMVNKALSVFYQIK 2
GKAKMVNKALS+FYQIK
Sbjct: 171 GKAKMVNKALSIFYQIK 187
>ref|XP_004157025.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g16010-like [Cucumis sativus]
Length = 637
Score = 40.4 bits (93), Expect(2) = 2e-06
Identities = 16/30 (53%), Positives = 23/30 (76%)
Frame = -2
Query: 141 GVKIQFWKTIQDMVHSNCVIGPAELSEIVR 52
G+ + W+TIQDM+ S C +GPAE SEI++
Sbjct: 138 GLVDEMWRTIQDMIRSPCSVGPAEWSEILK 167
Score = 36.6 bits (83), Expect(2) = 2e-06
Identities = 17/17 (100%), Positives = 17/17 (100%)
Frame = -1
Query: 52 GKAKMVNKALSVFYQIK 2
GKAKMVNKALSVFYQIK
Sbjct: 170 GKAKMVNKALSVFYQIK 186
>ref|XP_004151539.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g16010-like [Cucumis sativus]
Length = 637
Score = 40.4 bits (93), Expect(2) = 2e-06
Identities = 16/30 (53%), Positives = 23/30 (76%)
Frame = -2
Query: 141 GVKIQFWKTIQDMVHSNCVIGPAELSEIVR 52
G+ + W+TIQDM+ S C +GPAE SEI++
Sbjct: 138 GLVDEMWRTIQDMIRSPCSVGPAEWSEILK 167
Score = 36.6 bits (83), Expect(2) = 2e-06
Identities = 17/17 (100%), Positives = 17/17 (100%)
Frame = -1
Query: 52 GKAKMVNKALSVFYQIK 2
GKAKMVNKALSVFYQIK
Sbjct: 170 GKAKMVNKALSVFYQIK 186
>ref|XP_002299640.2| hypothetical protein POPTR_0001s18030g [Populus trichocarpa]
gi|550347580|gb|EEE84445.2| hypothetical protein
POPTR_0001s18030g [Populus trichocarpa]
Length = 641
Score = 40.0 bits (92), Expect(2) = 3e-06
Identities = 19/33 (57%), Positives = 25/33 (75%), Gaps = 1/33 (3%)
Frame = -2
Query: 147 DIGVKIQFWKTIQDMVHS-NCVIGPAELSEIVR 52
D G+ + WK IQ+MV S CVIGPA+LSE+V+
Sbjct: 139 DCGLFGEMWKMIQEMVRSPTCVIGPADLSEVVK 171
Score = 36.6 bits (83), Expect(2) = 3e-06
Identities = 17/17 (100%), Positives = 17/17 (100%)
Frame = -1
Query: 52 GKAKMVNKALSVFYQIK 2
GKAKMVNKALSVFYQIK
Sbjct: 174 GKAKMVNKALSVFYQIK 190
>gb|EYU21550.1| hypothetical protein MIMGU_mgv1a002764mg [Mimulus guttatus]
Length = 640
Score = 43.1 bits (100), Expect(2) = 4e-06
Identities = 19/28 (67%), Positives = 22/28 (78%)
Frame = -2
Query: 123 WKTIQDMVHSNCVIGPAELSEIVRARRR 40
WKTIQ+MV S C +GPA+LSEIVR R
Sbjct: 143 WKTIQEMVKSPCAVGPADLSEIVRVLGR 170
Score = 33.1 bits (74), Expect(2) = 4e-06
Identities = 14/17 (82%), Positives = 16/17 (94%)
Frame = -1
Query: 52 GKAKMVNKALSVFYQIK 2
G+AKMVNKALS+FY IK
Sbjct: 169 GRAKMVNKALSIFYHIK 185
>ref|XP_003597780.1| Beta-D-galactosidase [Medicago truncatula]
gi|357455013|ref|XP_003597787.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
gi|355486828|gb|AES68031.1| Beta-D-galactosidase
[Medicago truncatula] gi|355486835|gb|AES68038.1|
Pentatricopeptide repeat-containing protein [Medicago
truncatula]
Length = 639
Score = 43.1 bits (100), Expect(2) = 4e-06
Identities = 18/26 (69%), Positives = 22/26 (84%)
Frame = -2
Query: 129 QFWKTIQDMVHSNCVIGPAELSEIVR 52
+ W+TIQDMV S C IGP+ELSEIV+
Sbjct: 143 ELWRTIQDMVKSPCAIGPSELSEIVK 168
Score = 33.1 bits (74), Expect(2) = 4e-06
Identities = 13/17 (76%), Positives = 16/17 (94%)
Frame = -1
Query: 52 GKAKMVNKALSVFYQIK 2
G+ KMVNKALS+FYQ+K
Sbjct: 171 GRVKMVNKALSIFYQVK 187
>ref|XP_006441042.1| hypothetical protein CICLE_v10023415mg [Citrus clementina]
gi|557543304|gb|ESR54282.1| hypothetical protein
CICLE_v10023415mg [Citrus clementina]
Length = 638
Score = 40.0 bits (92), Expect(2) = 4e-06
Identities = 17/23 (73%), Positives = 20/23 (86%)
Frame = -2
Query: 123 WKTIQDMVHSNCVIGPAELSEIV 55
WK+IQDMV S CV+GP+ LSEIV
Sbjct: 145 WKSIQDMVRSTCVMGPSVLSEIV 167
Score = 36.2 bits (82), Expect(2) = 4e-06
Identities = 16/17 (94%), Positives = 17/17 (100%)
Frame = -1
Query: 52 GKAKMVNKALSVFYQIK 2
GKAKMVNKALS+FYQIK
Sbjct: 171 GKAKMVNKALSIFYQIK 187
>ref|XP_006346579.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g16010-like isoform X1 [Solanum tuberosum]
Length = 637
Score = 40.8 bits (94), Expect(2) = 5e-06
Identities = 17/32 (53%), Positives = 23/32 (71%)
Frame = -2
Query: 147 DIGVKIQFWKTIQDMVHSNCVIGPAELSEIVR 52
+ G+ + WKT+Q+M S CVI PA+LSE VR
Sbjct: 135 EAGLTGEMWKTVQEMARSTCVITPADLSETVR 166
Score = 35.0 bits (79), Expect(2) = 5e-06
Identities = 15/17 (88%), Positives = 17/17 (100%)
Frame = -1
Query: 52 GKAKMVNKALSVFYQIK 2
G+AKMVNKALS+FYQIK
Sbjct: 169 GRAKMVNKALSIFYQIK 185
>ref|XP_004486725.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g16010-like isoform X1 [Cicer arietinum]
Length = 638
Score = 41.6 bits (96), Expect(2) = 8e-06
Identities = 17/26 (65%), Positives = 21/26 (80%)
Frame = -2
Query: 129 QFWKTIQDMVHSNCVIGPAELSEIVR 52
+ W+TIQDMV S C GP+ELSEIV+
Sbjct: 143 ELWRTIQDMVKSPCAFGPSELSEIVK 168
Score = 33.5 bits (75), Expect(2) = 8e-06
Identities = 14/17 (82%), Positives = 16/17 (94%)
Frame = -1
Query: 52 GKAKMVNKALSVFYQIK 2
G+ KMVNKALSVFYQ+K
Sbjct: 171 GRVKMVNKALSVFYQVK 187
>ref|XP_007150666.1| hypothetical protein PHAVU_005G171500g [Phaseolus vulgaris]
gi|561023930|gb|ESW22660.1| hypothetical protein
PHAVU_005G171500g [Phaseolus vulgaris]
Length = 632
Score = 43.1 bits (100), Expect(2) = 8e-06
Identities = 18/24 (75%), Positives = 21/24 (87%)
Frame = -2
Query: 123 WKTIQDMVHSNCVIGPAELSEIVR 52
WKTIQDMV +C +GPAELSEIV+
Sbjct: 139 WKTIQDMVKGSCAMGPAELSEIVK 162
Score = 32.0 bits (71), Expect(2) = 8e-06
Identities = 13/17 (76%), Positives = 16/17 (94%)
Frame = -1
Query: 52 GKAKMVNKALSVFYQIK 2
G+ KMVN+ALSVFYQ+K
Sbjct: 165 GRIKMVNRALSVFYQVK 181