BLASTX nr result
ID: Sinomenium22_contig00052851
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium22_contig00052851
(548 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006446878.1| hypothetical protein CICLE_v10015161mg [Citr... 232 5e-59
ref|XP_006468938.1| PREDICTED: DNA cross-link repair protein SNM... 231 7e-59
ref|XP_006468937.1| PREDICTED: DNA cross-link repair protein SNM... 231 7e-59
ref|XP_006395534.1| hypothetical protein EUTSA_v10004102mg [Eutr... 223 2e-56
ref|XP_004493110.1| PREDICTED: DNA cross-link repair protein SNM... 223 3e-56
ref|XP_004493109.1| PREDICTED: DNA cross-link repair protein SNM... 223 3e-56
ref|XP_007032072.1| DNA repair metallo-beta-lactamase family pro... 221 9e-56
ref|XP_007032071.1| DNA repair metallo-beta-lactamase family pro... 221 9e-56
ref|XP_006844683.1| hypothetical protein AMTR_s00016p00244350 [A... 221 1e-55
ref|XP_007161798.1| hypothetical protein PHAVU_001G099000g [Phas... 220 2e-55
ref|XP_006292214.1| hypothetical protein CARUB_v10018420mg [Caps... 219 3e-55
ref|XP_002512800.1| DNA cross-link repair protein pso2/snm1, put... 219 3e-55
ref|XP_006598990.1| PREDICTED: DNA cross-link repair protein SNM... 218 1e-54
ref|XP_006598989.1| PREDICTED: DNA cross-link repair protein SNM... 218 1e-54
ref|XP_006598988.1| PREDICTED: DNA cross-link repair protein SNM... 218 1e-54
ref|XP_003548485.1| PREDICTED: DNA cross-link repair protein SNM... 218 1e-54
ref|XP_002875331.1| hypothetical protein ARALYDRAFT_484438 [Arab... 218 1e-54
ref|XP_003624539.1| DNA cross-link repair protein SNM1 [Medicago... 217 2e-54
ref|NP_189302.1| DNA cross-link repair protein SNM1 [Arabidopsis... 216 2e-54
emb|CAA66406.1| orf12 [Arabidopsis thaliana] 216 2e-54
>ref|XP_006446878.1| hypothetical protein CICLE_v10015161mg [Citrus clementina]
gi|557549489|gb|ESR60118.1| hypothetical protein
CICLE_v10015161mg [Citrus clementina]
Length = 464
Score = 232 bits (591), Expect = 5e-59
Identities = 113/182 (62%), Positives = 124/182 (68%)
Frame = +1
Query: 1 LFHIWGFKKPDVSSVRSACSSLTPNEDHKKKKMKTQPMLGSFTHSDKVNQKTPRLATKSP 180
LF +WG K S S KK+K TH K+
Sbjct: 75 LFDMWGLKSNSESEANCLFSP-------PMKKLKASNGKSKATHLKKI------------ 115
Query: 181 RTGGRACPFYKKIPGTPFTVDAFRYGLIEGCSAYFLSHFHRDHYGGLSKGWSHGPIYCSP 360
R+CPFYKKIPGTPFTVDAFRYG I+GCSAYFL+HFH DHYGGL K WSHGPIYCSP
Sbjct: 116 --ADRSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSP 173
Query: 361 LTARLVRMCLLVNPSFIHPFELDIEYAIDGIKVTFLEANHCPGATLIHFRLADGRCYLHT 540
LTARLVRMCLLVNPS+IHP EL+ E+ IDG+KVT LEANHCPGA LIHFRL DG+CYLHT
Sbjct: 174 LTARLVRMCLLVNPSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHT 233
Query: 541 GD 546
GD
Sbjct: 234 GD 235
>ref|XP_006468938.1| PREDICTED: DNA cross-link repair protein SNM1-like isoform X2
[Citrus sinensis]
Length = 439
Score = 231 bits (590), Expect = 7e-59
Identities = 113/182 (62%), Positives = 125/182 (68%)
Frame = +1
Query: 1 LFHIWGFKKPDVSSVRSACSSLTPNEDHKKKKMKTQPMLGSFTHSDKVNQKTPRLATKSP 180
LF +WG K S S KK+K + TH K+
Sbjct: 75 LFDMWGLKSNSESEANCLFSP-------PMKKLKASNGKSTATHLKKIVD---------- 117
Query: 181 RTGGRACPFYKKIPGTPFTVDAFRYGLIEGCSAYFLSHFHRDHYGGLSKGWSHGPIYCSP 360
R+CPFYKKIPGTPFTVDAFRYG I+GCSAYFL+HFH DHYGGL K WSHGPIYCSP
Sbjct: 118 ----RSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSP 173
Query: 361 LTARLVRMCLLVNPSFIHPFELDIEYAIDGIKVTFLEANHCPGATLIHFRLADGRCYLHT 540
LTARLVRMCLLVNPS+IHP EL+ E+ IDG+KVT LEANHCPGA LIHFRL DG+CYLHT
Sbjct: 174 LTARLVRMCLLVNPSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHT 233
Query: 541 GD 546
GD
Sbjct: 234 GD 235
>ref|XP_006468937.1| PREDICTED: DNA cross-link repair protein SNM1-like isoform X1
[Citrus sinensis]
Length = 464
Score = 231 bits (590), Expect = 7e-59
Identities = 113/182 (62%), Positives = 125/182 (68%)
Frame = +1
Query: 1 LFHIWGFKKPDVSSVRSACSSLTPNEDHKKKKMKTQPMLGSFTHSDKVNQKTPRLATKSP 180
LF +WG K S S KK+K + TH K+
Sbjct: 75 LFDMWGLKSNSESEANCLFSP-------PMKKLKASNGKSTATHLKKIVD---------- 117
Query: 181 RTGGRACPFYKKIPGTPFTVDAFRYGLIEGCSAYFLSHFHRDHYGGLSKGWSHGPIYCSP 360
R+CPFYKKIPGTPFTVDAFRYG I+GCSAYFL+HFH DHYGGL K WSHGPIYCSP
Sbjct: 118 ----RSCPFYKKIPGTPFTVDAFRYGSIKGCSAYFLTHFHYDHYGGLGKRWSHGPIYCSP 173
Query: 361 LTARLVRMCLLVNPSFIHPFELDIEYAIDGIKVTFLEANHCPGATLIHFRLADGRCYLHT 540
LTARLVRMCLLVNPS+IHP EL+ E+ IDG+KVT LEANHCPGA LIHFRL DG+CYLHT
Sbjct: 174 LTARLVRMCLLVNPSYIHPLELNTEHVIDGVKVTLLEANHCPGAALIHFRLQDGQCYLHT 233
Query: 541 GD 546
GD
Sbjct: 234 GD 235
>ref|XP_006395534.1| hypothetical protein EUTSA_v10004102mg [Eutrema salsugineum]
gi|557092173|gb|ESQ32820.1| hypothetical protein
EUTSA_v10004102mg [Eutrema salsugineum]
Length = 483
Score = 223 bits (569), Expect = 2e-56
Identities = 106/182 (58%), Positives = 126/182 (69%)
Frame = +1
Query: 1 LFHIWGFKKPDVSSVRSACSSLTPNEDHKKKKMKTQPMLGSFTHSDKVNQKTPRLATKSP 180
LF IWG +KP S+ ++ S+ KT +LG + + +PR
Sbjct: 100 LFQIWGLQKPSPSTSPASSSA-----------KKTSNVLGKRLRNSPLTNDSPR------ 142
Query: 181 RTGGRACPFYKKIPGTPFTVDAFRYGLIEGCSAYFLSHFHRDHYGGLSKGWSHGPIYCSP 360
CPFYKK+PGTPFTVDAFRYG ++GCSAYFL+HFH DHY GL+K WSHGPIYCS
Sbjct: 143 -----QCPFYKKLPGTPFTVDAFRYGCVQGCSAYFLTHFHADHYIGLTKAWSHGPIYCSS 197
Query: 361 LTARLVRMCLLVNPSFIHPFELDIEYAIDGIKVTFLEANHCPGATLIHFRLADGRCYLHT 540
LT+RL+R+ L VNPSFIHP ELD+EY I G+KVT +EANHCPGA LIHFRL DG CYLHT
Sbjct: 198 LTSRLLRLSLSVNPSFIHPLELDVEYTIYGVKVTLIEANHCPGAALIHFRLLDGTCYLHT 257
Query: 541 GD 546
GD
Sbjct: 258 GD 259
>ref|XP_004493110.1| PREDICTED: DNA cross-link repair protein SNM1-like isoform X2
[Cicer arietinum]
Length = 491
Score = 223 bits (567), Expect = 3e-56
Identities = 110/194 (56%), Positives = 128/194 (65%), Gaps = 12/194 (6%)
Frame = +1
Query: 1 LFHIWGFKKP-DVSSVR------SACSSLTPNEDHKKKKMKTQPMLGSFTHSDKVNQKTP 159
LF IWGFK+ DV SV C + ++K+ GS + P
Sbjct: 103 LFQIWGFKRNVDVGSVEVEPNQGGYCDEVGEGSVSSERKIVKPGNWGSILRDKGKVVENP 162
Query: 160 RLATKSPRTGG-----RACPFYKKIPGTPFTVDAFRYGLIEGCSAYFLSHFHRDHYGGLS 324
+ +TK G R+CPFYKK+PGT FTVDAFRYG +E CSAYFLSHFH DHYGGLS
Sbjct: 163 KSSTKRKSFSGENRVTRSCPFYKKMPGTNFTVDAFRYGCVEECSAYFLSHFHADHYGGLS 222
Query: 325 KGWSHGPIYCSPLTARLVRMCLLVNPSFIHPFELDIEYAIDGIKVTFLEANHCPGATLIH 504
K WSHGPIYCSPLT RLV+MCL VNPS+I P E D EY I+G KVT ++ANHCPGA LIH
Sbjct: 223 KKWSHGPIYCSPLTGRLVQMCLYVNPSYIFPLEFDTEYVIEGTKVTLIDANHCPGAALIH 282
Query: 505 FRLADGRCYLHTGD 546
F L +G+CYLHTGD
Sbjct: 283 FELPNGQCYLHTGD 296
>ref|XP_004493109.1| PREDICTED: DNA cross-link repair protein SNM1-like isoform X1
[Cicer arietinum]
Length = 520
Score = 223 bits (567), Expect = 3e-56
Identities = 110/194 (56%), Positives = 128/194 (65%), Gaps = 12/194 (6%)
Frame = +1
Query: 1 LFHIWGFKKP-DVSSVR------SACSSLTPNEDHKKKKMKTQPMLGSFTHSDKVNQKTP 159
LF IWGFK+ DV SV C + ++K+ GS + P
Sbjct: 103 LFQIWGFKRNVDVGSVEVEPNQGGYCDEVGEGSVSSERKIVKPGNWGSILRDKGKVVENP 162
Query: 160 RLATKSPRTGG-----RACPFYKKIPGTPFTVDAFRYGLIEGCSAYFLSHFHRDHYGGLS 324
+ +TK G R+CPFYKK+PGT FTVDAFRYG +E CSAYFLSHFH DHYGGLS
Sbjct: 163 KSSTKRKSFSGENRVTRSCPFYKKMPGTNFTVDAFRYGCVEECSAYFLSHFHADHYGGLS 222
Query: 325 KGWSHGPIYCSPLTARLVRMCLLVNPSFIHPFELDIEYAIDGIKVTFLEANHCPGATLIH 504
K WSHGPIYCSPLT RLV+MCL VNPS+I P E D EY I+G KVT ++ANHCPGA LIH
Sbjct: 223 KKWSHGPIYCSPLTGRLVQMCLYVNPSYIFPLEFDTEYVIEGTKVTLIDANHCPGAALIH 282
Query: 505 FRLADGRCYLHTGD 546
F L +G+CYLHTGD
Sbjct: 283 FELPNGQCYLHTGD 296
>ref|XP_007032072.1| DNA repair metallo-beta-lactamase family protein isoform 2
[Theobroma cacao] gi|508711101|gb|EOY02998.1| DNA repair
metallo-beta-lactamase family protein isoform 2
[Theobroma cacao]
Length = 431
Score = 221 bits (563), Expect = 9e-56
Identities = 107/182 (58%), Positives = 124/182 (68%)
Frame = +1
Query: 1 LFHIWGFKKPDVSSVRSACSSLTPNEDHKKKKMKTQPMLGSFTHSDKVNQKTPRLATKSP 180
LF +WG KKP + S TPN + N P+ ++
Sbjct: 80 LFQMWGLKKP---RLLQDASFPTPN---------------------RTNIPNPKPSSTII 115
Query: 181 RTGGRACPFYKKIPGTPFTVDAFRYGLIEGCSAYFLSHFHRDHYGGLSKGWSHGPIYCSP 360
R CPFYKKIPGTPFTVDAFRYG ++GCSAYFL+HFH DHYGGL+KGWSHGPIYC+P
Sbjct: 116 SNRPRVCPFYKKIPGTPFTVDAFRYGCVQGCSAYFLTHFHCDHYGGLTKGWSHGPIYCTP 175
Query: 361 LTARLVRMCLLVNPSFIHPFELDIEYAIDGIKVTFLEANHCPGATLIHFRLADGRCYLHT 540
LTA L+ +CL VNP FI+P ELD E++I GIKVT LEANHCPGA LIHFRL DG+CYLHT
Sbjct: 176 LTAGLLTLCLSVNPLFINPLELDKEHSIQGIKVTLLEANHCPGAALIHFRLPDGKCYLHT 235
Query: 541 GD 546
GD
Sbjct: 236 GD 237
>ref|XP_007032071.1| DNA repair metallo-beta-lactamase family protein isoform 1
[Theobroma cacao] gi|508711100|gb|EOY02997.1| DNA repair
metallo-beta-lactamase family protein isoform 1
[Theobroma cacao]
Length = 461
Score = 221 bits (563), Expect = 9e-56
Identities = 107/182 (58%), Positives = 124/182 (68%)
Frame = +1
Query: 1 LFHIWGFKKPDVSSVRSACSSLTPNEDHKKKKMKTQPMLGSFTHSDKVNQKTPRLATKSP 180
LF +WG KKP + S TPN + N P+ ++
Sbjct: 80 LFQMWGLKKP---RLLQDASFPTPN---------------------RTNIPNPKPSSTII 115
Query: 181 RTGGRACPFYKKIPGTPFTVDAFRYGLIEGCSAYFLSHFHRDHYGGLSKGWSHGPIYCSP 360
R CPFYKKIPGTPFTVDAFRYG ++GCSAYFL+HFH DHYGGL+KGWSHGPIYC+P
Sbjct: 116 SNRPRVCPFYKKIPGTPFTVDAFRYGCVQGCSAYFLTHFHCDHYGGLTKGWSHGPIYCTP 175
Query: 361 LTARLVRMCLLVNPSFIHPFELDIEYAIDGIKVTFLEANHCPGATLIHFRLADGRCYLHT 540
LTA L+ +CL VNP FI+P ELD E++I GIKVT LEANHCPGA LIHFRL DG+CYLHT
Sbjct: 176 LTAGLLTLCLSVNPLFINPLELDKEHSIQGIKVTLLEANHCPGAALIHFRLPDGKCYLHT 235
Query: 541 GD 546
GD
Sbjct: 236 GD 237
>ref|XP_006844683.1| hypothetical protein AMTR_s00016p00244350 [Amborella trichopoda]
gi|548847154|gb|ERN06358.1| hypothetical protein
AMTR_s00016p00244350 [Amborella trichopoda]
Length = 479
Score = 221 bits (562), Expect = 1e-55
Identities = 111/189 (58%), Positives = 127/189 (67%), Gaps = 7/189 (3%)
Frame = +1
Query: 1 LFHIWGFKKP-------DVSSVRSACSSLTPNEDHKKKKMKTQPMLGSFTHSDKVNQKTP 159
LF +WG KKP ++ R L +D +K+ SD++N +
Sbjct: 84 LFKLWGLKKPVQSKNETKLAPSRKRTVDLESIDDQSGRKL--------LRSSDEINPNSN 135
Query: 160 RLATKSPRTGGRACPFYKKIPGTPFTVDAFRYGLIEGCSAYFLSHFHRDHYGGLSKGWSH 339
+ R CPFYKKI GTPFTVDAFRYGLIEGC+AYFLSHFH DHYGGLSK WSH
Sbjct: 136 QQ---------RTCPFYKKIHGTPFTVDAFRYGLIEGCAAYFLSHFHYDHYGGLSKKWSH 186
Query: 340 GPIYCSPLTARLVRMCLLVNPSFIHPFELDIEYAIDGIKVTFLEANHCPGATLIHFRLAD 519
GPIYC+ LTARLV++ L VNP FI P ELD EY I+G+KVT LEANHCPGA LIHFRL D
Sbjct: 187 GPIYCTHLTARLVKLSLSVNPRFICPMELDTEYIIEGVKVTMLEANHCPGAALIHFRLKD 246
Query: 520 GRCYLHTGD 546
GRCYLHTGD
Sbjct: 247 GRCYLHTGD 255
>ref|XP_007161798.1| hypothetical protein PHAVU_001G099000g [Phaseolus vulgaris]
gi|561035262|gb|ESW33792.1| hypothetical protein
PHAVU_001G099000g [Phaseolus vulgaris]
Length = 410
Score = 220 bits (561), Expect = 2e-55
Identities = 112/191 (58%), Positives = 132/191 (69%), Gaps = 9/191 (4%)
Frame = +1
Query: 1 LFHIWGFKKPD-VSSVRSACSSLTPNED---HKKKKMKTQPMLGSFTHS-DKVNQKTPRL 165
LF IWGFK+ D V SV S S +++ + K+ GS K ++ T L
Sbjct: 100 LFQIWGFKRNDAVGSVESGPSLSVYSDEGGSSSENKIVKPGNWGSILRDRGKESENTKSL 159
Query: 166 ATKSPRTGG----RACPFYKKIPGTPFTVDAFRYGLIEGCSAYFLSHFHRDHYGGLSKGW 333
+ +G R+CPFYKKIPGT FTVDAFRYG +EGCSAYFLSHFH DHYGGLSK W
Sbjct: 160 RKRKGFSGENRVTRSCPFYKKIPGTTFTVDAFRYGCVEGCSAYFLSHFHYDHYGGLSKKW 219
Query: 334 SHGPIYCSPLTARLVRMCLLVNPSFIHPFELDIEYAIDGIKVTFLEANHCPGATLIHFRL 513
SHGPIYCSPLT RLV+MCL VNP +I+P E + E+ IDG+KVT LEANHCPGA LIHF L
Sbjct: 220 SHGPIYCSPLTGRLVQMCLSVNPLYIYPLEFNTEHLIDGVKVTLLEANHCPGAALIHFSL 279
Query: 514 ADGRCYLHTGD 546
+ +CYLHTGD
Sbjct: 280 PNDQCYLHTGD 290
>ref|XP_006292214.1| hypothetical protein CARUB_v10018420mg [Capsella rubella]
gi|482560921|gb|EOA25112.1| hypothetical protein
CARUB_v10018420mg [Capsella rubella]
Length = 483
Score = 219 bits (559), Expect = 3e-55
Identities = 109/182 (59%), Positives = 123/182 (67%)
Frame = +1
Query: 1 LFHIWGFKKPDVSSVRSACSSLTPNEDHKKKKMKTQPMLGSFTHSDKVNQKTPRLATKSP 180
LF IWG +KP S S S+ N T LG + +PR
Sbjct: 100 LFQIWGLQKP--SPFTSPASTSAKN---------TATGLGKRRRDSLFSNDSPR------ 142
Query: 181 RTGGRACPFYKKIPGTPFTVDAFRYGLIEGCSAYFLSHFHRDHYGGLSKGWSHGPIYCSP 360
CPFYKK+PGTPFTVDAFRYG ++GCSAYFL+HFH DHY GL+K WSHGPIYCS
Sbjct: 143 -----PCPFYKKLPGTPFTVDAFRYGCVQGCSAYFLTHFHADHYIGLTKDWSHGPIYCSS 197
Query: 361 LTARLVRMCLLVNPSFIHPFELDIEYAIDGIKVTFLEANHCPGATLIHFRLADGRCYLHT 540
LT+RL+R+ L VNPSFIHP ELDIEY I+GIKVT +EANHCPGA LIHFRL DG CYLHT
Sbjct: 198 LTSRLLRLSLSVNPSFIHPLELDIEYTINGIKVTLIEANHCPGAALIHFRLLDGTCYLHT 257
Query: 541 GD 546
GD
Sbjct: 258 GD 259
>ref|XP_002512800.1| DNA cross-link repair protein pso2/snm1, putative [Ricinus
communis] gi|223547811|gb|EEF49303.1| DNA cross-link
repair protein pso2/snm1, putative [Ricinus communis]
Length = 493
Score = 219 bits (559), Expect = 3e-55
Identities = 106/182 (58%), Positives = 131/182 (71%)
Frame = +1
Query: 1 LFHIWGFKKPDVSSVRSACSSLTPNEDHKKKKMKTQPMLGSFTHSDKVNQKTPRLATKSP 180
L +WG K ++ + LT + KK+K +GS + S + L KS
Sbjct: 98 LLDVWGLKN---NNPKPKALPLTSSSPSPFKKLK----IGS-SSSSSIKPNYKNLIPKSI 149
Query: 181 RTGGRACPFYKKIPGTPFTVDAFRYGLIEGCSAYFLSHFHRDHYGGLSKGWSHGPIYCSP 360
+ R CPFYKKIPGTPFTVDAFRYG I+ CSAYFL+HFH DHYGGL+KGWSHGPIYC+
Sbjct: 150 KP--RVCPFYKKIPGTPFTVDAFRYGPIQNCSAYFLTHFHADHYGGLTKGWSHGPIYCTQ 207
Query: 361 LTARLVRMCLLVNPSFIHPFELDIEYAIDGIKVTFLEANHCPGATLIHFRLADGRCYLHT 540
LTARL+++CL VN SFIHP +L+ EYAI+G++VT LEANHCPGA L+HFRL++G CYLHT
Sbjct: 208 LTARLLKLCLYVNSSFIHPLDLNTEYAIEGVRVTLLEANHCPGAALLHFRLSNGLCYLHT 267
Query: 541 GD 546
GD
Sbjct: 268 GD 269
>ref|XP_006598990.1| PREDICTED: DNA cross-link repair protein SNM1-like isoform X4
[Glycine max]
Length = 459
Score = 218 bits (554), Expect = 1e-54
Identities = 109/191 (57%), Positives = 130/191 (68%), Gaps = 9/191 (4%)
Frame = +1
Query: 1 LFHIWGFKKPD-VSSVRSACSSLTPNED----HKKKKMKTQPMLGSFTHSDKVNQKTPRL 165
LF IWGFK+ D + SV S S +D ++K +K + F + K +
Sbjct: 91 LFQIWGFKRNDAIGSVESGPSKSGCCDDGGGSSERKIVKPENRCSIFPDTGKEFENAKSS 150
Query: 166 ATKSPRTGG----RACPFYKKIPGTPFTVDAFRYGLIEGCSAYFLSHFHRDHYGGLSKGW 333
+ G R+CPFYKK+PGT FTVDAFRYG +EGCSAYFL+HFH DHYGGLSK W
Sbjct: 151 RKRKGSCGENRVTRSCPFYKKMPGTMFTVDAFRYGCVEGCSAYFLTHFHCDHYGGLSKKW 210
Query: 334 SHGPIYCSPLTARLVRMCLLVNPSFIHPFELDIEYAIDGIKVTFLEANHCPGATLIHFRL 513
SHGPIYCSPLT RLV+MCL VNP +IHP E + E+ IDG+KVT LEANHCPGA LIHF L
Sbjct: 211 SHGPIYCSPLTGRLVQMCLSVNPLYIHPLEFNEEHVIDGVKVTLLEANHCPGAALIHFNL 270
Query: 514 ADGRCYLHTGD 546
+G+ YLHTGD
Sbjct: 271 PNGQRYLHTGD 281
>ref|XP_006598989.1| PREDICTED: DNA cross-link repair protein SNM1-like isoform X3
[Glycine max]
Length = 479
Score = 218 bits (554), Expect = 1e-54
Identities = 109/191 (57%), Positives = 130/191 (68%), Gaps = 9/191 (4%)
Frame = +1
Query: 1 LFHIWGFKKPD-VSSVRSACSSLTPNED----HKKKKMKTQPMLGSFTHSDKVNQKTPRL 165
LF IWGFK+ D + SV S S +D ++K +K + F + K +
Sbjct: 91 LFQIWGFKRNDAIGSVESGPSKSGCCDDGGGSSERKIVKPENRCSIFPDTGKEFENAKSS 150
Query: 166 ATKSPRTGG----RACPFYKKIPGTPFTVDAFRYGLIEGCSAYFLSHFHRDHYGGLSKGW 333
+ G R+CPFYKK+PGT FTVDAFRYG +EGCSAYFL+HFH DHYGGLSK W
Sbjct: 151 RKRKGSCGENRVTRSCPFYKKMPGTMFTVDAFRYGCVEGCSAYFLTHFHCDHYGGLSKKW 210
Query: 334 SHGPIYCSPLTARLVRMCLLVNPSFIHPFELDIEYAIDGIKVTFLEANHCPGATLIHFRL 513
SHGPIYCSPLT RLV+MCL VNP +IHP E + E+ IDG+KVT LEANHCPGA LIHF L
Sbjct: 211 SHGPIYCSPLTGRLVQMCLSVNPLYIHPLEFNEEHVIDGVKVTLLEANHCPGAALIHFNL 270
Query: 514 ADGRCYLHTGD 546
+G+ YLHTGD
Sbjct: 271 PNGQRYLHTGD 281
>ref|XP_006598988.1| PREDICTED: DNA cross-link repair protein SNM1-like isoform X2
[Glycine max]
Length = 503
Score = 218 bits (554), Expect = 1e-54
Identities = 109/191 (57%), Positives = 130/191 (68%), Gaps = 9/191 (4%)
Frame = +1
Query: 1 LFHIWGFKKPD-VSSVRSACSSLTPNED----HKKKKMKTQPMLGSFTHSDKVNQKTPRL 165
LF IWGFK+ D + SV S S +D ++K +K + F + K +
Sbjct: 91 LFQIWGFKRNDAIGSVESGPSKSGCCDDGGGSSERKIVKPENRCSIFPDTGKEFENAKSS 150
Query: 166 ATKSPRTGG----RACPFYKKIPGTPFTVDAFRYGLIEGCSAYFLSHFHRDHYGGLSKGW 333
+ G R+CPFYKK+PGT FTVDAFRYG +EGCSAYFL+HFH DHYGGLSK W
Sbjct: 151 RKRKGSCGENRVTRSCPFYKKMPGTMFTVDAFRYGCVEGCSAYFLTHFHCDHYGGLSKKW 210
Query: 334 SHGPIYCSPLTARLVRMCLLVNPSFIHPFELDIEYAIDGIKVTFLEANHCPGATLIHFRL 513
SHGPIYCSPLT RLV+MCL VNP +IHP E + E+ IDG+KVT LEANHCPGA LIHF L
Sbjct: 211 SHGPIYCSPLTGRLVQMCLSVNPLYIHPLEFNEEHVIDGVKVTLLEANHCPGAALIHFNL 270
Query: 514 ADGRCYLHTGD 546
+G+ YLHTGD
Sbjct: 271 PNGQRYLHTGD 281
>ref|XP_003548485.1| PREDICTED: DNA cross-link repair protein SNM1-like isoform X1
[Glycine max]
Length = 505
Score = 218 bits (554), Expect = 1e-54
Identities = 109/191 (57%), Positives = 130/191 (68%), Gaps = 9/191 (4%)
Frame = +1
Query: 1 LFHIWGFKKPD-VSSVRSACSSLTPNED----HKKKKMKTQPMLGSFTHSDKVNQKTPRL 165
LF IWGFK+ D + SV S S +D ++K +K + F + K +
Sbjct: 91 LFQIWGFKRNDAIGSVESGPSKSGCCDDGGGSSERKIVKPENRCSIFPDTGKEFENAKSS 150
Query: 166 ATKSPRTGG----RACPFYKKIPGTPFTVDAFRYGLIEGCSAYFLSHFHRDHYGGLSKGW 333
+ G R+CPFYKK+PGT FTVDAFRYG +EGCSAYFL+HFH DHYGGLSK W
Sbjct: 151 RKRKGSCGENRVTRSCPFYKKMPGTMFTVDAFRYGCVEGCSAYFLTHFHCDHYGGLSKKW 210
Query: 334 SHGPIYCSPLTARLVRMCLLVNPSFIHPFELDIEYAIDGIKVTFLEANHCPGATLIHFRL 513
SHGPIYCSPLT RLV+MCL VNP +IHP E + E+ IDG+KVT LEANHCPGA LIHF L
Sbjct: 211 SHGPIYCSPLTGRLVQMCLSVNPLYIHPLEFNEEHVIDGVKVTLLEANHCPGAALIHFNL 270
Query: 514 ADGRCYLHTGD 546
+G+ YLHTGD
Sbjct: 271 PNGQRYLHTGD 281
>ref|XP_002875331.1| hypothetical protein ARALYDRAFT_484438 [Arabidopsis lyrata subsp.
lyrata] gi|297321169|gb|EFH51590.1| hypothetical protein
ARALYDRAFT_484438 [Arabidopsis lyrata subsp. lyrata]
Length = 483
Score = 218 bits (554), Expect = 1e-54
Identities = 105/182 (57%), Positives = 122/182 (67%)
Frame = +1
Query: 1 LFHIWGFKKPDVSSVRSACSSLTPNEDHKKKKMKTQPMLGSFTHSDKVNQKTPRLATKSP 180
LF WG +KP + ++ SS KT LG +PR
Sbjct: 100 LFQSWGLQKPSPFTSPASNSS-----------KKTTSALGKRRRDSSFGNDSPR------ 142
Query: 181 RTGGRACPFYKKIPGTPFTVDAFRYGLIEGCSAYFLSHFHRDHYGGLSKGWSHGPIYCSP 360
CPFYKK+PGTPFTVDAFRYG ++GCSAYFL+HFH DHY GL+K WSHGPIYCS
Sbjct: 143 -----PCPFYKKLPGTPFTVDAFRYGCVQGCSAYFLTHFHADHYIGLTKAWSHGPIYCSS 197
Query: 361 LTARLVRMCLLVNPSFIHPFELDIEYAIDGIKVTFLEANHCPGATLIHFRLADGRCYLHT 540
LT+RL+R+ L V+PSFIHP ELD+EY I+GIKVT +EANHCPGA LIHFRL DG CYLHT
Sbjct: 198 LTSRLLRLSLSVDPSFIHPLELDVEYTINGIKVTLIEANHCPGAALIHFRLLDGTCYLHT 257
Query: 541 GD 546
GD
Sbjct: 258 GD 259
>ref|XP_003624539.1| DNA cross-link repair protein SNM1 [Medicago truncatula]
gi|87241310|gb|ABD33168.1| DNA repair
metallo-beta-lactamase [Medicago truncatula]
gi|355499554|gb|AES80757.1| DNA cross-link repair
protein SNM1 [Medicago truncatula]
Length = 511
Score = 217 bits (552), Expect = 2e-54
Identities = 108/190 (56%), Positives = 127/190 (66%), Gaps = 8/190 (4%)
Frame = +1
Query: 1 LFHIWGFKKP---DVSSVRSACSSLTPNEDHKKKKMKTQPMLGSFTH-SDKVNQKTPRLA 168
LF IWGFK+ + + C + +KK + GS + KV + +
Sbjct: 98 LFQIWGFKRNVEFESPNQGGYCDVVGEGSVSSEKKSVKRGNWGSILRDTGKVVENSKSTG 157
Query: 169 TKSPRTGG----RACPFYKKIPGTPFTVDAFRYGLIEGCSAYFLSHFHRDHYGGLSKGWS 336
+ G R+CPFYKK+PGT FTVDAFRYG +E CSAYFLSHFH DHYGGLSK WS
Sbjct: 158 KRKSFHGEKRVTRSCPFYKKMPGTNFTVDAFRYGCVEECSAYFLSHFHADHYGGLSKKWS 217
Query: 337 HGPIYCSPLTARLVRMCLLVNPSFIHPFELDIEYAIDGIKVTFLEANHCPGATLIHFRLA 516
HGPIYCSPLT RLV+MCL VNPS+I P E D EY IDGIKVT ++ANHCPGA LIHF L
Sbjct: 218 HGPIYCSPLTGRLVQMCLYVNPSYICPLEFDTEYVIDGIKVTLIDANHCPGAALIHFELP 277
Query: 517 DGRCYLHTGD 546
+G+CYLHTGD
Sbjct: 278 NGQCYLHTGD 287
>ref|NP_189302.1| DNA cross-link repair protein SNM1 [Arabidopsis thaliana]
gi|30688447|ref|NP_850635.1| DNA cross-link repair
protein SNM1 [Arabidopsis thaliana]
gi|79313637|ref|NP_001030773.1| DNA cross-link repair
protein SNM1 [Arabidopsis thaliana]
gi|73621911|sp|Q38961.1|SNM1_ARATH RecName: Full=DNA
cross-link repair protein SNM1; Short=AtSNM1
gi|1402886|emb|CAA66817.1| hypothetical protein
[Arabidopsis thaliana] gi|11994302|dbj|BAB01732.1|
unnamed protein product [Arabidopsis thaliana]
gi|26449933|dbj|BAC42087.1| unknown protein [Arabidopsis
thaliana] gi|28827378|gb|AAO50533.1| unknown protein
[Arabidopsis thaliana] gi|332643675|gb|AEE77196.1| DNA
cross-link repair protein SNM1 [Arabidopsis thaliana]
gi|332643676|gb|AEE77197.1| DNA cross-link repair
protein SNM1 [Arabidopsis thaliana]
gi|332643677|gb|AEE77198.1| DNA cross-link repair
protein SNM1 [Arabidopsis thaliana]
Length = 484
Score = 216 bits (551), Expect = 2e-54
Identities = 106/182 (58%), Positives = 121/182 (66%)
Frame = +1
Query: 1 LFHIWGFKKPDVSSVRSACSSLTPNEDHKKKKMKTQPMLGSFTHSDKVNQKTPRLATKSP 180
LF WG +KP S T + KK T LG + +PR
Sbjct: 101 LFQSWGLQKP---------SPFTSPASNSAKK--TTSALGKRRRDSSFSNDSPR------ 143
Query: 181 RTGGRACPFYKKIPGTPFTVDAFRYGLIEGCSAYFLSHFHRDHYGGLSKGWSHGPIYCSP 360
CPFYKK+PGTPFTVDAFRYG ++GCSAYFL+HFH DHY GL+K WSHGPIYCS
Sbjct: 144 -----PCPFYKKLPGTPFTVDAFRYGCVQGCSAYFLTHFHADHYIGLTKAWSHGPIYCSS 198
Query: 361 LTARLVRMCLLVNPSFIHPFELDIEYAIDGIKVTFLEANHCPGATLIHFRLADGRCYLHT 540
LT+RL+R+ L VNPS IHP ELD+EY I+GIKVT +EANHCPGA LIHFRL DG CYLHT
Sbjct: 199 LTSRLLRLSLSVNPSSIHPLELDVEYTINGIKVTLIEANHCPGAALIHFRLLDGTCYLHT 258
Query: 541 GD 546
GD
Sbjct: 259 GD 260
>emb|CAA66406.1| orf12 [Arabidopsis thaliana]
Length = 484
Score = 216 bits (551), Expect = 2e-54
Identities = 106/182 (58%), Positives = 121/182 (66%)
Frame = +1
Query: 1 LFHIWGFKKPDVSSVRSACSSLTPNEDHKKKKMKTQPMLGSFTHSDKVNQKTPRLATKSP 180
LF WG +KP S T + KK T LG + +PR
Sbjct: 101 LFQSWGLQKP---------SPFTSPASNSAKK--TTSALGKRRRDSSFSNDSPR------ 143
Query: 181 RTGGRACPFYKKIPGTPFTVDAFRYGLIEGCSAYFLSHFHRDHYGGLSKGWSHGPIYCSP 360
CPFYKK+PGTPFTVDAFRYG ++GCSAYFL+HFH DHY GL+K WSHGPIYCS
Sbjct: 144 -----PCPFYKKLPGTPFTVDAFRYGCVQGCSAYFLTHFHADHYIGLTKAWSHGPIYCSS 198
Query: 361 LTARLVRMCLLVNPSFIHPFELDIEYAIDGIKVTFLEANHCPGATLIHFRLADGRCYLHT 540
LT+RL+R+ L VNPS IHP ELD+EY I+GIKVT +EANHCPGA LIHFRL DG CYLHT
Sbjct: 199 LTSRLLRLSLSVNPSSIHPLELDVEYTINGIKVTLIEANHCPGAALIHFRLLDGTCYLHT 258
Query: 541 GD 546
GD
Sbjct: 259 GD 260