BLASTX nr result
ID: Sinomenium22_contig00052805
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium22_contig00052805
(360 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN61340.1| hypothetical protein VITISV_007301 [Vitis vinifera] 93 2e-26
emb|CAN63563.1| hypothetical protein VITISV_003097 [Vitis vinifera] 93 3e-25
emb|CAN71427.1| hypothetical protein VITISV_027864 [Vitis vinifera] 91 6e-25
emb|CAN75363.1| hypothetical protein VITISV_026292 [Vitis vinifera] 79 1e-20
emb|CAN73532.1| hypothetical protein VITISV_012827 [Vitis vinifera] 70 6e-17
ref|XP_007036479.1| Cysteine-rich RLK (RECEPTOR-like protein kin... 59 2e-13
emb|CBI35129.3| unnamed protein product [Vitis vinifera] 65 1e-12
ref|XP_004250670.1| PREDICTED: uncharacterized mitochondrial pro... 59 2e-12
ref|XP_007009906.1| Cysteine-rich RLK (RECEPTOR-like protein kin... 62 3e-12
emb|CAN74303.1| hypothetical protein VITISV_032980 [Vitis vinifera] 64 4e-12
emb|CAN76439.1| hypothetical protein VITISV_001759 [Vitis vinifera] 61 9e-11
emb|CAN81839.1| hypothetical protein VITISV_033739 [Vitis vinifera] 57 1e-10
emb|CAN81156.1| hypothetical protein VITISV_016610 [Vitis vinifera] 62 2e-10
ref|XP_001882498.1| retrovirus-related pol polyprotein [Laccaria... 60 2e-10
emb|CAN74283.1| hypothetical protein VITISV_032452 [Vitis vinifera] 55 4e-10
gb|AFP55578.1| copia-type polyprotein [Rosa rugosa] 59 4e-10
gb|ABG22121.1| polyprotein [Solanum melongena] 57 9e-10
gb|AAK70406.1|AF369930_1 pol polyprotein [Citrus x paradisi] 54 1e-09
gb|ABA95797.1| retrotransposon protein, putative, unclassified [... 59 1e-09
dbj|BAB11200.1| copia-type polyprotein [Arabidopsis thaliana] gi... 58 1e-09
>emb|CAN61340.1| hypothetical protein VITISV_007301 [Vitis vinifera]
Length = 973
Score = 92.8 bits (229), Expect(2) = 2e-26
Identities = 48/85 (56%), Positives = 61/85 (71%), Gaps = 2/85 (2%)
Frame = +1
Query: 91 DEDTLQSTVDYVFSITSGAVSWCSKRQLTVSLSTTKAEYRTAAVTAQESTWL--M**KIH 264
D DT +ST YVF + SGA+SWCSKRQ TVSL TT+AEYR AA+ AQESTWL + +H
Sbjct: 821 DHDTRRSTTGYVFMLGSGAISWCSKRQPTVSLLTTEAEYRAAAMAAQESTWLIRLMNDLH 880
Query: 265 ININGTLMLHCGNQLAI*LEDNPVF 339
++ + L+C NQ A+ L +NPVF
Sbjct: 881 QLVDYAVPLYCDNQSAVRLAENPVF 905
Score = 52.0 bits (123), Expect(2) = 2e-26
Identities = 23/34 (67%), Positives = 26/34 (76%)
Frame = +2
Query: 2 VKGTIDISLLYKKGENC*VIGYCDVDYAPATKTR 103
VKGTID LLYKKGE+C ++GYCD DYA TR
Sbjct: 792 VKGTIDYGLLYKKGEDCKLVGYCDADYAGDHDTR 825
>emb|CAN63563.1| hypothetical protein VITISV_003097 [Vitis vinifera]
Length = 1052
Score = 92.8 bits (229), Expect(2) = 3e-25
Identities = 48/85 (56%), Positives = 61/85 (71%), Gaps = 2/85 (2%)
Frame = +1
Query: 91 DEDTLQSTVDYVFSITSGAVSWCSKRQLTVSLSTTKAEYRTAAVTAQESTWL--M**KIH 264
D DT +ST YVF + S A+SWCSKRQ TVSLSTT+AEYR AA+ QESTWL + +H
Sbjct: 900 DHDTRRSTTGYVFMLGSRAISWCSKRQPTVSLSTTEAEYRAAAMATQESTWLIXLMNDLH 959
Query: 265 ININGTLMLHCGNQLAI*LEDNPVF 339
++ + L+C NQLA+ L +NPVF
Sbjct: 960 QLVDYAVPLYCDNQLAVHLAENPVF 984
Score = 48.1 bits (113), Expect(2) = 3e-25
Identities = 21/34 (61%), Positives = 24/34 (70%)
Frame = +2
Query: 2 VKGTIDISLLYKKGENC*VIGYCDVDYAPATKTR 103
VK TID LLYKKGE+C ++GYCD DY TR
Sbjct: 871 VKSTIDYGLLYKKGEDCKLVGYCDADYTGDHDTR 904
>emb|CAN71427.1| hypothetical protein VITISV_027864 [Vitis vinifera]
Length = 1300
Score = 90.5 bits (223), Expect(2) = 6e-25
Identities = 47/85 (55%), Positives = 59/85 (69%), Gaps = 2/85 (2%)
Frame = +1
Query: 91 DEDTLQSTVDYVFSITSGAVSWCSKRQLTVSLSTTKAEYRTAAVTAQESTWL--M**KIH 264
D DT ST YVF + SGA+SWCSKRQ TVSLSTT+AEYR AA+ QES WL + +H
Sbjct: 1148 DHDTRXSTTGYVFMLGSGAISWCSKRQPTVSLSTTEAEYRAAAMATQESMWLIRLMNDLH 1207
Query: 265 ININGTLMLHCGNQLAI*LEDNPVF 339
++ + L+C NQ A+ L +NPVF
Sbjct: 1208 QLVDYAVPLYCDNQSAVRLAENPVF 1232
Score = 49.3 bits (116), Expect(2) = 6e-25
Identities = 22/34 (64%), Positives = 25/34 (73%)
Frame = +2
Query: 2 VKGTIDISLLYKKGENC*VIGYCDVDYAPATKTR 103
VKGTID LLYKK E+C ++GYCD DYA TR
Sbjct: 1119 VKGTIDYGLLYKKXEDCKLVGYCDADYAGDHDTR 1152
>emb|CAN75363.1| hypothetical protein VITISV_026292 [Vitis vinifera]
Length = 1161
Score = 79.3 bits (194), Expect(2) = 1e-20
Identities = 42/82 (51%), Positives = 54/82 (65%), Gaps = 2/82 (2%)
Frame = +1
Query: 91 DEDTLQSTVDYVFSITSGAVSWCSKRQLTVSLSTTKAEYRTAAVTAQESTWL--M**KIH 264
D DT +ST YVF + S A+SWCSKRQ TVSLST + EYR A + AQESTWL + +H
Sbjct: 1075 DHDTRRSTTGYVFMLGSRAISWCSKRQPTVSLSTMEXEYRAAPMAAQESTWLIRLMNDLH 1134
Query: 265 ININGTLMLHCGNQLAI*LEDN 330
++ L+C NQ A+ L +N
Sbjct: 1135 QXVDYAXPLYCDNQSAVRLAEN 1156
Score = 46.2 bits (108), Expect(2) = 1e-20
Identities = 21/34 (61%), Positives = 24/34 (70%)
Frame = +2
Query: 2 VKGTIDISLLYKKGENC*VIGYCDVDYAPATKTR 103
VKGTID LLYKKGE+ ++GYCD DY TR
Sbjct: 1046 VKGTIDYGLLYKKGEDYKLVGYCDADYVGDHDTR 1079
>emb|CAN73532.1| hypothetical protein VITISV_012827 [Vitis vinifera]
Length = 1194
Score = 70.5 bits (171), Expect(2) = 6e-17
Identities = 34/52 (65%), Positives = 40/52 (76%)
Frame = +1
Query: 91 DEDTLQSTVDYVFSITSGAVSWCSKRQLTVSLSTTKAEYRTAAVTAQESTWL 246
D DT +ST YVF + SGA+SWCSKRQ TVSLSTT+AEYR AA+ QE+ L
Sbjct: 1069 DHDTXRSTTGYVFMLGSGAISWCSKRQPTVSLSTTEAEYRAAAMAXQETVRL 1120
Score = 42.4 bits (98), Expect(2) = 6e-17
Identities = 18/27 (66%), Positives = 21/27 (77%)
Frame = +2
Query: 2 VKGTIDISLLYKKGENC*VIGYCDVDY 82
VKGTID LLYKK E+C ++GY D DY
Sbjct: 1040 VKGTIDYGLLYKKXEDCKLVGYYDADY 1066
>ref|XP_007036479.1| Cysteine-rich RLK (RECEPTOR-like protein kinase) 8 [Theobroma
cacao] gi|508773724|gb|EOY20980.1| Cysteine-rich RLK
(RECEPTOR-like protein kinase) 8 [Theobroma cacao]
Length = 318
Score = 58.5 bits (140), Expect(2) = 2e-13
Identities = 27/39 (69%), Positives = 31/39 (79%)
Frame = +1
Query: 91 DEDTLQSTVDYVFSITSGAVSWCSKRQLTVSLSTTKAEY 207
D DT +ST YVF + SG +SWCSKRQ TVSLSTT+AEY
Sbjct: 280 DYDTRRSTTGYVFKLGSGVISWCSKRQPTVSLSTTEAEY 318
Score = 42.7 bits (99), Expect(2) = 2e-13
Identities = 18/34 (52%), Positives = 22/34 (64%)
Frame = +2
Query: 2 VKGTIDISLLYKKGENC*VIGYCDVDYAPATKTR 103
VKG ID +LYKK + C ++GYCD DY TR
Sbjct: 251 VKGKIDYGILYKKDKECKLVGYCDADYTGDYDTR 284
>emb|CBI35129.3| unnamed protein product [Vitis vinifera]
Length = 947
Score = 65.5 bits (158), Expect(2) = 1e-12
Identities = 36/84 (42%), Positives = 51/84 (60%), Gaps = 2/84 (2%)
Frame = +1
Query: 91 DEDTLQSTVDYVFSITSGAVSWCSKRQLTVSLSTTKAEYRTAAVTAQESTWL--M**KIH 264
D+D +ST YVF + +GAVSW SK+Q V+LSTT+AE+ A V A ++ WL + ++H
Sbjct: 311 DQDNRRSTSGYVFMLGTGAVSWSSKKQPIVTLSTTEAEFVAATVCACQAIWLRKILEELH 370
Query: 265 ININGTLMLHCGNQLAI*LEDNPV 336
+ G + C N I L NPV
Sbjct: 371 LKQVGATTIFCDNSSTIKLSKNPV 394
Score = 32.7 bits (73), Expect(2) = 1e-12
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = +2
Query: 2 VKGTIDISLLYKKGENC*VIGYCDVDYA 85
++GT D L YKKG+ +IG+ D DYA
Sbjct: 282 LQGTKDFGLFYKKGKRSDLIGFTDSDYA 309
>ref|XP_004250670.1| PREDICTED: uncharacterized mitochondrial protein AtMg00810-like
[Solanum lycopersicum]
Length = 283
Score = 58.9 bits (141), Expect(2) = 2e-12
Identities = 27/44 (61%), Positives = 33/44 (75%)
Frame = +1
Query: 91 DEDTLQSTVDYVFSITSGAVSWCSKRQLTVSLSTTKAEYRTAAV 222
D DT +ST + F + +GA+SWCSKRQ VSLSTT+AEYR AV
Sbjct: 238 DHDTRRSTTGFTFKLGAGAISWCSKRQPIVSLSTTEAEYRAPAV 281
Score = 38.9 bits (89), Expect(2) = 2e-12
Identities = 18/34 (52%), Positives = 22/34 (64%)
Frame = +2
Query: 2 VKGTIDISLLYKKGENC*VIGYCDVDYAPATKTR 103
VK TI L++KKGE C ++GY D DYA TR
Sbjct: 209 VKSTIGYGLVFKKGEECKLVGYYDSDYARDHDTR 242
>ref|XP_007009906.1| Cysteine-rich RLK (RECEPTOR-like protein kinase) 8 [Theobroma
cacao] gi|508726819|gb|EOY18716.1| Cysteine-rich RLK
(RECEPTOR-like protein kinase) 8 [Theobroma cacao]
Length = 259
Score = 62.0 bits (149), Expect(2) = 3e-12
Identities = 33/87 (37%), Positives = 51/87 (58%), Gaps = 2/87 (2%)
Frame = +1
Query: 91 DEDTLQSTVDYVFSITSGAVSWCSKRQLTVSLSTTKAEYRTAAVTAQESTWL--M**KIH 264
D D +ST +VF + S A+SW SK+Q ++LSTT+A++ A A +S WL + +I+
Sbjct: 134 DRDDRKSTTGFVFKLESNAISWSSKKQPIITLSTTEAKFVAATACACQSIWLKKLLKEIY 193
Query: 265 ININGTLMLHCGNQLAI*LEDNPVFMQ 345
++C N AI L NPVF++
Sbjct: 194 CKQTEATPIYCDNSSAIKLSKNPVFLR 220
Score = 35.0 bits (79), Expect(2) = 3e-12
Identities = 16/28 (57%), Positives = 20/28 (71%)
Frame = +2
Query: 2 VKGTIDISLLYKKGENC*VIGYCDVDYA 85
++GT LLYKKGEN +IG+ D DYA
Sbjct: 105 LQGTTSHGLLYKKGENSMLIGFTDRDYA 132
>emb|CAN74303.1| hypothetical protein VITISV_032980 [Vitis vinifera]
Length = 1283
Score = 63.9 bits (154), Expect(2) = 4e-12
Identities = 35/84 (41%), Positives = 50/84 (59%), Gaps = 2/84 (2%)
Frame = +1
Query: 91 DEDTLQSTVDYVFSITSGAVSWCSKRQLTVSLSTTKAEYRTAAVTAQESTWL--M**KIH 264
D+D +ST YVF + +GAVSW SK+Q V+LSTT+AE+ A A ++ WL + ++H
Sbjct: 1136 DQDNRRSTSGYVFMLGTGAVSWSSKKQPIVTLSTTEAEFVAATACACQAIWLRKILEELH 1195
Query: 265 ININGTLMLHCGNQLAI*LEDNPV 336
+ G + C N I L NPV
Sbjct: 1196 LKQVGATTIFCDNSSTIKLSKNPV 1219
Score = 32.7 bits (73), Expect(2) = 4e-12
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = +2
Query: 2 VKGTIDISLLYKKGENC*VIGYCDVDYA 85
++GT D L YKKG+ +IG+ D DYA
Sbjct: 1107 LQGTKDFGLFYKKGKRSDLIGFTDSDYA 1134
>emb|CAN76439.1| hypothetical protein VITISV_001759 [Vitis vinifera]
Length = 808
Score = 61.2 bits (147), Expect(2) = 9e-11
Identities = 33/84 (39%), Positives = 50/84 (59%), Gaps = 2/84 (2%)
Frame = +1
Query: 91 DEDTLQSTVDYVFSITSGAVSWCSKRQLTVSLSTTKAEYRTAAVTAQESTWL--M**KIH 264
D+D +ST+ YVF + +GAVSW SK+Q V+LSTT+A++ A ++ WL + ++H
Sbjct: 661 DQDNGRSTLGYVFMLGTGAVSWSSKKQPIVTLSTTEAKFVATTACACQAIWLRKILEELH 720
Query: 265 ININGTLMLHCGNQLAI*LEDNPV 336
+ G + C N I L NPV
Sbjct: 721 LKQVGATTIFCDNSSTIKLSKNPV 744
Score = 30.8 bits (68), Expect(2) = 9e-11
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = +2
Query: 2 VKGTIDISLLYKKGENC*VIGYCDVDYA 85
++GT D L YKKG+ +IG+ + DYA
Sbjct: 632 LQGTKDFGLFYKKGKRSNLIGFTENDYA 659
>emb|CAN81839.1| hypothetical protein VITISV_033739 [Vitis vinifera]
Length = 1088
Score = 57.4 bits (137), Expect(2) = 1e-10
Identities = 37/86 (43%), Positives = 52/86 (60%), Gaps = 4/86 (4%)
Frame = +1
Query: 91 DEDTLQSTVDYVFSITSGAVSWCSKRQLTVSLSTTKAEYRTAAVTAQESTWLM**KIHIN 270
D D +ST YVF + S AVSW SK+Q V+LSTT+AE+ AA +A ++ WL +I +
Sbjct: 942 DHDDRKSTSGYVF-MNSSAVSWSSKKQPVVTLSTTEAEFIAAASSACQAVWLR--RILKS 998
Query: 271 IN----GTLMLHCGNQLAI*LEDNPV 336
+N +++C N AI L NPV
Sbjct: 999 LNQVQTSPTVIYCDNVSAIKLSKNPV 1024
Score = 34.3 bits (77), Expect(2) = 1e-10
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = +2
Query: 2 VKGTIDISLLYKKGENC*VIGYCDVDYA 85
VKGT++ + YKKG + IGY D DYA
Sbjct: 913 VKGTVEFGVFYKKGGDDKFIGYTDSDYA 940
>emb|CAN81156.1| hypothetical protein VITISV_016610 [Vitis vinifera]
Length = 1021
Score = 62.4 bits (150), Expect(2) = 2e-10
Identities = 37/84 (44%), Positives = 51/84 (60%), Gaps = 2/84 (2%)
Frame = +1
Query: 91 DEDTLQSTVDYVFSITSGAVSWCSKRQLTVSLSTTKAEYRTAAVTAQESTWL--M**KIH 264
D + +ST YVF ++S AVSW S++Q VSLSTT+AE+ AA A ++ WL + K+
Sbjct: 879 DLEDKKSTSGYVFLLSSRAVSWSSRKQPVVSLSTTEAEFIAAASCACQAVWLKRVLGKLS 938
Query: 265 ININGTLMLHCGNQLAI*LEDNPV 336
N + +HC N AI L NPV
Sbjct: 939 QNQGKSTTIHCDNSSAIKLSKNPV 962
Score = 28.5 bits (62), Expect(2) = 2e-10
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +2
Query: 2 VKGTIDISLLYKKGENC*VIGYCDVDYA 85
+KGT + + YKKG + + Y D DYA
Sbjct: 850 LKGTTEFGIFYKKGGDDELAAYTDSDYA 877
>ref|XP_001882498.1| retrovirus-related pol polyprotein [Laccaria bicolor S238N-H82]
gi|164642395|gb|EDR06651.1| retrovirus-related pol
polyprotein [Laccaria bicolor S238N-H82]
Length = 1450
Score = 60.1 bits (144), Expect(2) = 2e-10
Identities = 28/52 (53%), Positives = 36/52 (69%)
Frame = +1
Query: 91 DEDTLQSTVDYVFSITSGAVSWCSKRQLTVSLSTTKAEYRTAAVTAQESTWL 246
D DT +ST YVF+I G VSW +KRQ TV+LSTT+AEY AQ++ W+
Sbjct: 1308 DVDTRRSTSGYVFTIAGGPVSWSAKRQATVALSTTEAEYMALTHAAQQALWM 1359
Score = 30.4 bits (67), Expect(2) = 2e-10
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +2
Query: 2 VKGTIDISLLYKKGENC*VIGYCDVDYAPATKTR 103
+KGTI + Y +G + IG+ D DYA TR
Sbjct: 1279 LKGTIGYKITYNRGGSLDPIGFVDADYAGDVDTR 1312
>emb|CAN74283.1| hypothetical protein VITISV_032452 [Vitis vinifera]
Length = 1338
Score = 54.7 bits (130), Expect(2) = 4e-10
Identities = 35/86 (40%), Positives = 48/86 (55%), Gaps = 4/86 (4%)
Frame = +1
Query: 91 DEDTLQSTVDYVFSITSGAVSWCSKRQLTVSLSTTKAEYRTAAVTAQESTWLM**KIHIN 270
D D +ST YVF ++SGAVSW SK+Q VSLSTT+AE+ A ++ WL +I
Sbjct: 1191 DLDDRKSTSGYVFMLSSGAVSWSSKKQPVVSLSTTEAEFIAATSCVCQAIWLR--RILEG 1248
Query: 271 IN----GTLMLHCGNQLAI*LEDNPV 336
+N + ++C N I L N V
Sbjct: 1249 LNHAQHDSTTVYCDNSSTIKLSKNLV 1274
Score = 35.0 bits (79), Expect(2) = 4e-10
Identities = 16/28 (57%), Positives = 19/28 (67%)
Frame = +2
Query: 2 VKGTIDISLLYKKGENC*VIGYCDVDYA 85
+KGTID + YKKG N +I Y D DYA
Sbjct: 1162 LKGTIDFGVFYKKGGNEELIAYTDSDYA 1189
>gb|AFP55578.1| copia-type polyprotein [Rosa rugosa]
Length = 1187
Score = 59.3 bits (142), Expect(2) = 4e-10
Identities = 35/85 (41%), Positives = 50/85 (58%), Gaps = 2/85 (2%)
Frame = +1
Query: 91 DEDTLQSTVDYVFSITSGAVSWCSKRQLTVSLSTTKAEYRTAAVTAQESTWL--M**KIH 264
D D +ST +VF ++ GAVSW S++Q V+LSTT+AEY AA A +S W+ + K+
Sbjct: 1040 DMDGKRSTSGFVFMLSGGAVSWSSRKQHVVTLSTTEAEYVAAAGCACQSVWMRRVLNKLG 1099
Query: 265 ININGTLMLHCGNQLAI*LEDNPVF 339
+ + + C N I L NPVF
Sbjct: 1100 YSQCKCVTMFCDNSSTIKLSKNPVF 1124
Score = 30.4 bits (67), Expect(2) = 4e-10
Identities = 11/28 (39%), Positives = 20/28 (71%)
Frame = +2
Query: 2 VKGTIDISLLYKKGENC*VIGYCDVDYA 85
+KGT ++ + Y++G + ++GY D DYA
Sbjct: 1011 LKGTTELGVFYRRGVDDELVGYTDSDYA 1038
>gb|ABG22121.1| polyprotein [Solanum melongena]
Length = 361
Score = 57.0 bits (136), Expect(2) = 9e-10
Identities = 34/84 (40%), Positives = 46/84 (54%), Gaps = 1/84 (1%)
Frame = +1
Query: 91 DEDTLQSTVDYVFSITSGAVSWCSKRQLTVSLSTTKAEYRTAAVTAQESTWLM**KIHIN 270
D D +ST Y+F++ G VSW S Q TV+LSTT+AEY +E+ WL +
Sbjct: 268 DLDKRRSTTGYLFTLAKGPVSWKSTLQATVALSTTEAEYMAITEAVKEAIWLHGLLEELG 327
Query: 271 INGT-LMLHCGNQLAI*LEDNPVF 339
+ LM+H +Q AI L N VF
Sbjct: 328 VGQKHLMVHSDSQSAIHLAKNQVF 351
Score = 31.6 bits (70), Expect(2) = 9e-10
Identities = 14/31 (45%), Positives = 23/31 (74%), Gaps = 3/31 (9%)
Frame = +2
Query: 2 VKGTIDISLLYKKGEN---C*VIGYCDVDYA 85
+K T+DI L++++ ++ C V+GYCD DYA
Sbjct: 237 IKNTVDIGLVFEQDKSLGSC-VVGYCDSDYA 266
>gb|AAK70406.1|AF369930_1 pol polyprotein [Citrus x paradisi]
Length = 297
Score = 53.9 bits (128), Expect(2) = 1e-09
Identities = 33/84 (39%), Positives = 46/84 (54%), Gaps = 1/84 (1%)
Frame = +1
Query: 91 DEDTLQSTVDYVFSITSGAVSWCSKRQLTVSLSTTKAEYRTAAVTAQESTWLM**KIHIN 270
D D +ST YVF++ G+VSW S Q T++LSTT+AEY A +E+ WL +
Sbjct: 154 DLDKQRSTSGYVFTLGGGSVSWRSILQSTIALSTTEAEYIAATEAVKEAIWLKGLLGDLG 213
Query: 271 -INGTLMLHCGNQLAI*LEDNPVF 339
I + + C NQ AI L N +
Sbjct: 214 VIQENIAVFCDNQSAIFLAKNQTY 237
Score = 34.3 bits (77), Expect(2) = 1e-09
Identities = 15/28 (53%), Positives = 21/28 (75%), Gaps = 2/28 (7%)
Frame = +2
Query: 8 GTIDISLLYKK--GENC*VIGYCDVDYA 85
GT+D+ LL+KK G+ C +GYCD D+A
Sbjct: 127 GTVDVGLLFKKNCGQQC--VGYCDSDFA 152
>gb|ABA95797.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1588
Score = 58.5 bits (140), Expect(2) = 1e-09
Identities = 31/85 (36%), Positives = 47/85 (55%), Gaps = 2/85 (2%)
Frame = +1
Query: 88 SDEDTLQSTVDYVFSITSGAVSWCSKRQLTVSLSTTKAEYRTAAVTAQESTWLM**KIHI 267
S D +ST Y + V W SK+Q V+ ST +AEYR A++ E W+ + +
Sbjct: 1440 SSVDDRRSTSGYCVFVGGNVVCWRSKKQAVVAQSTAEAEYRAMALSLSEMLWVKNLLLEL 1499
Query: 268 NI--NGTLMLHCGNQLAI*LEDNPV 336
+ N T++LHC N+ AI + +NPV
Sbjct: 1500 RLFRNNTVVLHCDNKFAINIANNPV 1524
Score = 29.3 bits (64), Expect(2) = 1e-09
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +2
Query: 2 VKGTIDISLLYKKGENC*VIGYCDVDYAPATKTR 103
+KGT L ++K ++ V GYCD D+A + R
Sbjct: 1412 LKGTPGKGLWFRKNQHLDVEGYCDADWASSVDDR 1445
>dbj|BAB11200.1| copia-type polyprotein [Arabidopsis thaliana]
gi|13872710|emb|CAC37622.1| polyprotein [Arabidopsis
thaliana]
Length = 1334
Score = 57.8 bits (138), Expect(2) = 1e-09
Identities = 33/84 (39%), Positives = 49/84 (58%), Gaps = 2/84 (2%)
Frame = +1
Query: 91 DEDTLQSTVDYVFSITSGAVSWCSKRQLTVSLSTTKAEYRTAAVTAQESTWL--M**KIH 264
D D +ST YVF + GA++W SK+Q V+LSTT+AE+ +A+ A ++ WL + +I
Sbjct: 1189 DVDDRKSTSGYVFMLGGGAIAWASKKQPIVTLSTTEAEFVSASYGACQAVWLRNVLEEIG 1248
Query: 265 ININGTLMLHCGNQLAI*LEDNPV 336
G ++ C N I L NPV
Sbjct: 1249 CRQEGGTLVFCDNSSTIKLSKNPV 1272
Score = 30.0 bits (66), Expect(2) = 1e-09
Identities = 11/28 (39%), Positives = 20/28 (71%)
Frame = +2
Query: 2 VKGTIDISLLYKKGENC*VIGYCDVDYA 85
V+GT+D+ + Y++G ++G+ D DYA
Sbjct: 1160 VQGTLDLGIQYERGGATELVGFVDSDYA 1187