BLASTX nr result
ID: Sinomenium22_contig00052691
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium22_contig00052691
(374 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002277780.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 102 5e-20
ref|XP_004134454.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 100 4e-19
emb|CBI26203.3| unnamed protein product [Vitis vinifera] 94 3e-17
gb|EXB55009.1| DEAD-box ATP-dependent RNA helicase 58 [Morus not... 91 2e-16
ref|XP_003565158.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 91 2e-16
ref|XP_002315792.2| hypothetical protein POPTR_0010s10230g [Popu... 91 2e-16
ref|XP_007222883.1| hypothetical protein PRUPE_ppa005191mg [Prun... 89 6e-16
gb|EEE67822.1| hypothetical protein OsJ_25587 [Oryza sativa Japo... 89 6e-16
sp|Q0JFN7.2|RH58_ORYSJ RecName: Full=DEAD-box ATP-dependent RNA ... 89 6e-16
dbj|BAD87358.1| putative RNA helicase [Oryza sativa Japonica Group] 89 6e-16
ref|XP_006646732.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 88 1e-15
gb|EMT33062.1| hypothetical protein F775_42997 [Aegilops tauschii] 88 1e-15
ref|XP_004951318.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 87 2e-15
ref|XP_006290141.1| hypothetical protein CARUB_v10003807mg [Caps... 87 2e-15
dbj|BAK00276.1| predicted protein [Hordeum vulgare subsp. vulgare] 87 2e-15
ref|XP_006349223.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 86 4e-15
ref|XP_007034658.1| P-loop containing nucleoside triphosphate hy... 86 4e-15
ref|XP_007034657.1| P-loop containing nucleoside triphosphate hy... 86 4e-15
ref|XP_007034656.1| P-loop containing nucleoside triphosphate hy... 86 4e-15
ref|XP_002871872.1| hypothetical protein ARALYDRAFT_488806 [Arab... 86 4e-15
>ref|XP_002277780.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 58,
chloroplastic-like [Vitis vinifera]
Length = 482
Score = 102 bits (254), Expect = 5e-20
Identities = 51/83 (61%), Positives = 65/83 (78%)
Frame = +3
Query: 126 RLSNCSLNSASSRASLIPLHVSSLNDTVETSQRASTLREICEGRVPEHVLRRAEEVGFVV 305
R+SN + N+ ++A+L + SS+ + + +R TLREIC+G VPEHVLRR EEVGF+V
Sbjct: 45 RVSNSNCNAKPAQATL---NSSSITEASDIGERTLTLREICQGCVPEHVLRRIEEVGFIV 101
Query: 306 PTDVQRQALPTLLSGRDCILHAQ 374
PTDVQ+QALP LLSGRDCILHAQ
Sbjct: 102 PTDVQQQALPVLLSGRDCILHAQ 124
>ref|XP_004134454.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 58,
chloroplastic-like [Cucumis sativus]
gi|449531697|ref|XP_004172822.1| PREDICTED: DEAD-box
ATP-dependent RNA helicase 58, chloroplastic-like
[Cucumis sativus]
Length = 473
Score = 99.8 bits (247), Expect = 4e-19
Identities = 48/76 (63%), Positives = 57/76 (75%)
Frame = +3
Query: 147 NSASSRASLIPLHVSSLNDTVETSQRASTLREICEGRVPEHVLRRAEEVGFVVPTDVQRQ 326
+++ SR L SSL + E++ ASTLREIC G VPEH+LRR EE+GFV PTDVQRQ
Sbjct: 44 STSKSRPLQALLSSSSLKNVAESNFEASTLREICNGHVPEHILRRTEEIGFVAPTDVQRQ 103
Query: 327 ALPTLLSGRDCILHAQ 374
ALP L SGRDC+LHAQ
Sbjct: 104 ALPVLFSGRDCVLHAQ 119
>emb|CBI26203.3| unnamed protein product [Vitis vinifera]
Length = 486
Score = 93.6 bits (231), Expect = 3e-17
Identities = 49/87 (56%), Positives = 64/87 (73%), Gaps = 4/87 (4%)
Frame = +3
Query: 126 RLSNCSLNSASSRASLIPLHVSSLNDTVETSQRASTLREICEGRVPEHVLR----RAEEV 293
R+SN + N+ ++A+L + SS+ + + +R TLREIC+G VPEHV+ R EEV
Sbjct: 45 RVSNSNCNAKPAQATL---NSSSITEASDIGERTLTLREICQGCVPEHVIALICFRIEEV 101
Query: 294 GFVVPTDVQRQALPTLLSGRDCILHAQ 374
GF+VPTDVQ+QALP LLSGRDCILHAQ
Sbjct: 102 GFIVPTDVQQQALPVLLSGRDCILHAQ 128
>gb|EXB55009.1| DEAD-box ATP-dependent RNA helicase 58 [Morus notabilis]
Length = 464
Score = 90.9 bits (224), Expect = 2e-16
Identities = 50/94 (53%), Positives = 61/94 (64%)
Frame = +3
Query: 93 HFVSPIQNPKPRLSNCSLNSASSRASLIPLHVSSLNDTVETSQRASTLREICEGRVPEHV 272
H +NP P L + S + S +P +SS D V QRA+TLR +CEG VPEHV
Sbjct: 21 HLPFRFRNPNPSLVSSIPRSPLAIRS-VPNLLSSAADAVPDEQRAATLRRLCEGLVPEHV 79
Query: 273 LRRAEEVGFVVPTDVQRQALPTLLSGRDCILHAQ 374
+ EEVG++ PTDVQRQALP L SGRDC+LHAQ
Sbjct: 80 V---EEVGYIEPTDVQRQALPILFSGRDCVLHAQ 110
>ref|XP_003565158.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 58,
chloroplastic-like [Brachypodium distachyon]
Length = 446
Score = 90.9 bits (224), Expect = 2e-16
Identities = 43/72 (59%), Positives = 55/72 (76%)
Frame = +3
Query: 159 SRASLIPLHVSSLNDTVETSQRASTLREICEGRVPEHVLRRAEEVGFVVPTDVQRQALPT 338
S S PL S+ + + A+TLRE+C GRVP+HVL+RAE+VG+VVPT+VQ Q+LP
Sbjct: 23 SSPSYTPLAASTSRSGLRPLRAAATLREVCAGRVPDHVLQRAEDVGYVVPTEVQEQSLPV 82
Query: 339 LLSGRDCILHAQ 374
LLSG+DCILHAQ
Sbjct: 83 LLSGQDCILHAQ 94
>ref|XP_002315792.2| hypothetical protein POPTR_0010s10230g [Populus trichocarpa]
gi|550329495|gb|EEF01963.2| hypothetical protein
POPTR_0010s10230g [Populus trichocarpa]
Length = 477
Score = 90.5 bits (223), Expect = 2e-16
Identities = 47/79 (59%), Positives = 55/79 (69%), Gaps = 7/79 (8%)
Frame = +3
Query: 159 SRASLIPLH-------VSSLNDTVETSQRASTLREICEGRVPEHVLRRAEEVGFVVPTDV 317
SR+S PL ++ + D + A TLREIC GRVPEH+LRR EEVG+ VPTDV
Sbjct: 45 SRSSFRPLKAILNSPSLTKVADDAKEKGEALTLREICLGRVPEHLLRRVEEVGYAVPTDV 104
Query: 318 QRQALPTLLSGRDCILHAQ 374
Q+QALP L SGRDCILHAQ
Sbjct: 105 QKQALPVLFSGRDCILHAQ 123
>ref|XP_007222883.1| hypothetical protein PRUPE_ppa005191mg [Prunus persica]
gi|462419819|gb|EMJ24082.1| hypothetical protein
PRUPE_ppa005191mg [Prunus persica]
Length = 473
Score = 89.0 bits (219), Expect = 6e-16
Identities = 54/103 (52%), Positives = 61/103 (59%), Gaps = 2/103 (1%)
Frame = +3
Query: 72 STKTTLAHFVSPIQNPKPRLSNCSLNSASSRASLIPLHVSSLNDTVETSQRAS--TLREI 245
S K AHF N PRL S N S S I ++S T E TLR+I
Sbjct: 20 SQKPRHAHFPFQSLNHSPRLF--SSNGFVSNCSPIQALLNSTPITTEAGSEPEPFTLRQI 77
Query: 246 CEGRVPEHVLRRAEEVGFVVPTDVQRQALPTLLSGRDCILHAQ 374
C+ VP+HVL + EE+GFVVPT VQRQALPTL SGRDCILHAQ
Sbjct: 78 CQSHVPDHVLCKMEELGFVVPTPVQRQALPTLFSGRDCILHAQ 120
>gb|EEE67822.1| hypothetical protein OsJ_25587 [Oryza sativa Japonica Group]
Length = 395
Score = 89.0 bits (219), Expect = 6e-16
Identities = 44/75 (58%), Positives = 54/75 (72%)
Frame = +3
Query: 150 SASSRASLIPLHVSSLNDTVETSQRASTLREICEGRVPEHVLRRAEEVGFVVPTDVQRQA 329
S + R+ L P + A+TLRE+C GRVPEHVL+RAEEVG+VVPT+VQ Q+
Sbjct: 12 STTLRSGLAPFTLRHRLRLRRLRASAATLREVCAGRVPEHVLQRAEEVGYVVPTEVQEQS 71
Query: 330 LPTLLSGRDCILHAQ 374
LP LLSG+DCILHAQ
Sbjct: 72 LPVLLSGQDCILHAQ 86
>sp|Q0JFN7.2|RH58_ORYSJ RecName: Full=DEAD-box ATP-dependent RNA helicase 58,
chloroplastic; Flags: Precursor
Length = 438
Score = 89.0 bits (219), Expect = 6e-16
Identities = 44/75 (58%), Positives = 54/75 (72%)
Frame = +3
Query: 150 SASSRASLIPLHVSSLNDTVETSQRASTLREICEGRVPEHVLRRAEEVGFVVPTDVQRQA 329
S + R+ L P + A+TLRE+C GRVPEHVL+RAEEVG+VVPT+VQ Q+
Sbjct: 12 STTLRSGLAPFTLRHRLRLRRLRASAATLREVCAGRVPEHVLQRAEEVGYVVPTEVQEQS 71
Query: 330 LPTLLSGRDCILHAQ 374
LP LLSG+DCILHAQ
Sbjct: 72 LPVLLSGQDCILHAQ 86
>dbj|BAD87358.1| putative RNA helicase [Oryza sativa Japonica Group]
Length = 377
Score = 89.0 bits (219), Expect = 6e-16
Identities = 44/75 (58%), Positives = 54/75 (72%)
Frame = +3
Query: 150 SASSRASLIPLHVSSLNDTVETSQRASTLREICEGRVPEHVLRRAEEVGFVVPTDVQRQA 329
S + R+ L P + A+TLRE+C GRVPEHVL+RAEEVG+VVPT+VQ Q+
Sbjct: 12 STTLRSGLAPFTLRHRLRLRRLRASAATLREVCAGRVPEHVLQRAEEVGYVVPTEVQEQS 71
Query: 330 LPTLLSGRDCILHAQ 374
LP LLSG+DCILHAQ
Sbjct: 72 LPVLLSGQDCILHAQ 86
>ref|XP_006646732.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 58,
chloroplastic-like [Oryza brachyantha]
Length = 448
Score = 87.8 bits (216), Expect = 1e-15
Identities = 39/50 (78%), Positives = 47/50 (94%)
Frame = +3
Query: 225 ASTLREICEGRVPEHVLRRAEEVGFVVPTDVQRQALPTLLSGRDCILHAQ 374
A+TLRE+C GRVPEHV++RAEEVG+VVPT+VQ Q+LP LLSG+DCILHAQ
Sbjct: 47 AATLREVCAGRVPEHVIQRAEEVGYVVPTEVQEQSLPVLLSGQDCILHAQ 96
>gb|EMT33062.1| hypothetical protein F775_42997 [Aegilops tauschii]
Length = 229
Score = 87.8 bits (216), Expect = 1e-15
Identities = 42/78 (53%), Positives = 56/78 (71%)
Frame = +3
Query: 141 SLNSASSRASLIPLHVSSLNDTVETSQRASTLREICEGRVPEHVLRRAEEVGFVVPTDVQ 320
+L S+ S L P S + + A+TLRE+C GRVP+HVL+RAE+VG++ PT+VQ
Sbjct: 20 TLISSPSSTRLAPFASRSRPRRLRAAAAAATLREVCSGRVPDHVLQRAEDVGYISPTEVQ 79
Query: 321 RQALPTLLSGRDCILHAQ 374
Q+LP LLSG+DCILHAQ
Sbjct: 80 EQSLPVLLSGQDCILHAQ 97
>ref|XP_004951318.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 58,
chloroplastic-like [Setaria italica]
Length = 456
Score = 87.0 bits (214), Expect = 2e-15
Identities = 39/50 (78%), Positives = 47/50 (94%)
Frame = +3
Query: 225 ASTLREICEGRVPEHVLRRAEEVGFVVPTDVQRQALPTLLSGRDCILHAQ 374
A+TLRE+C GRVP+HVL+RAEEVG+VVPT+VQ Q+LP LLSG+DCILHAQ
Sbjct: 54 AATLREVCAGRVPDHVLQRAEEVGYVVPTEVQEQSLPLLLSGQDCILHAQ 103
>ref|XP_006290141.1| hypothetical protein CARUB_v10003807mg [Capsella rubella]
gi|482558847|gb|EOA23039.1| hypothetical protein
CARUB_v10003807mg [Capsella rubella]
Length = 471
Score = 87.0 bits (214), Expect = 2e-15
Identities = 44/89 (49%), Positives = 57/89 (64%), Gaps = 5/89 (5%)
Frame = +3
Query: 123 PRLSNCSLNSASSRASLIPLHV-----SSLNDTVETSQRASTLREICEGRVPEHVLRRAE 287
P + +L S+SS + + L S + T A TLR+IC+ VPEH+L R E
Sbjct: 32 PSFTTRALKSSSSASRINHLQALVDSFSEIESNSATETTALTLRQICQAFVPEHILHRME 91
Query: 288 EVGFVVPTDVQRQALPTLLSGRDCILHAQ 374
E+GFV PTD+QR+ALPTL +GRDCILHAQ
Sbjct: 92 EIGFVFPTDIQREALPTLFTGRDCILHAQ 120
>dbj|BAK00276.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 448
Score = 87.0 bits (214), Expect = 2e-15
Identities = 44/78 (56%), Positives = 58/78 (74%)
Frame = +3
Query: 141 SLNSASSRASLIPLHVSSLNDTVETSQRASTLREICEGRVPEHVLRRAEEVGFVVPTDVQ 320
+L+S+ ASL P + T+ A+TLRE+C GRVP+HVL+RAE+VG+V PT+VQ
Sbjct: 20 TLSSSPRAASLAPFASRPRPRPLRTTA-AATLREVCSGRVPDHVLQRAEDVGYVSPTEVQ 78
Query: 321 RQALPTLLSGRDCILHAQ 374
Q+LP LLSG+DCILHAQ
Sbjct: 79 EQSLPVLLSGQDCILHAQ 96
>ref|XP_006349223.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 58,
chloroplastic-like [Solanum tuberosum]
Length = 462
Score = 86.3 bits (212), Expect = 4e-15
Identities = 43/71 (60%), Positives = 52/71 (73%), Gaps = 5/71 (7%)
Frame = +3
Query: 177 PLHVSSLNDTVETS-----QRASTLREICEGRVPEHVLRRAEEVGFVVPTDVQRQALPTL 341
PL VS + VET+ +TLRE+C G V EHV+RRAEEVG+V+PT+VQ QALP L
Sbjct: 35 PLRVSFSSSNVETTTLTKDSSTTTLRELCYGHVQEHVIRRAEEVGYVIPTEVQLQALPFL 94
Query: 342 LSGRDCILHAQ 374
SGRDC+LHAQ
Sbjct: 95 FSGRDCVLHAQ 105
>ref|XP_007034658.1| P-loop containing nucleoside triphosphate hydrolases superfamily
protein isoform 3 [Theobroma cacao]
gi|508713687|gb|EOY05584.1| P-loop containing nucleoside
triphosphate hydrolases superfamily protein isoform 3
[Theobroma cacao]
Length = 351
Score = 86.3 bits (212), Expect = 4e-15
Identities = 47/99 (47%), Positives = 62/99 (62%)
Frame = +3
Query: 78 KTTLAHFVSPIQNPKPRLSNCSLNSASSRASLIPLHVSSLNDTVETSQRASTLREICEGR 257
K T F+ +N LS+ + SA + S + L +ET+ + TLREIC+
Sbjct: 21 KPTTCRFLLQPRNRYLNLSSSANFSAKALFSSYNSNSVPLTKELETNCNSLTLREICQDH 80
Query: 258 VPEHVLRRAEEVGFVVPTDVQRQALPTLLSGRDCILHAQ 374
VP+HVL R EE+G+V+PTDVQR+ALP L SG DCILHAQ
Sbjct: 81 VPDHVLGRMEELGYVMPTDVQREALPVLFSGNDCILHAQ 119
>ref|XP_007034657.1| P-loop containing nucleoside triphosphate hydrolases superfamily
protein isoform 2 [Theobroma cacao]
gi|508713686|gb|EOY05583.1| P-loop containing nucleoside
triphosphate hydrolases superfamily protein isoform 2
[Theobroma cacao]
Length = 409
Score = 86.3 bits (212), Expect = 4e-15
Identities = 47/99 (47%), Positives = 62/99 (62%)
Frame = +3
Query: 78 KTTLAHFVSPIQNPKPRLSNCSLNSASSRASLIPLHVSSLNDTVETSQRASTLREICEGR 257
K T F+ +N LS+ + SA + S + L +ET+ + TLREIC+
Sbjct: 21 KPTTCRFLLQPRNRYLNLSSSANFSAKALFSSYNSNSVPLTKELETNCNSLTLREICQDH 80
Query: 258 VPEHVLRRAEEVGFVVPTDVQRQALPTLLSGRDCILHAQ 374
VP+HVL R EE+G+V+PTDVQR+ALP L SG DCILHAQ
Sbjct: 81 VPDHVLGRMEELGYVMPTDVQREALPVLFSGNDCILHAQ 119
>ref|XP_007034656.1| P-loop containing nucleoside triphosphate hydrolases superfamily
protein isoform 1 [Theobroma cacao]
gi|508713685|gb|EOY05582.1| P-loop containing nucleoside
triphosphate hydrolases superfamily protein isoform 1
[Theobroma cacao]
Length = 477
Score = 86.3 bits (212), Expect = 4e-15
Identities = 47/99 (47%), Positives = 62/99 (62%)
Frame = +3
Query: 78 KTTLAHFVSPIQNPKPRLSNCSLNSASSRASLIPLHVSSLNDTVETSQRASTLREICEGR 257
K T F+ +N LS+ + SA + S + L +ET+ + TLREIC+
Sbjct: 21 KPTTCRFLLQPRNRYLNLSSSANFSAKALFSSYNSNSVPLTKELETNCNSLTLREICQDH 80
Query: 258 VPEHVLRRAEEVGFVVPTDVQRQALPTLLSGRDCILHAQ 374
VP+HVL R EE+G+V+PTDVQR+ALP L SG DCILHAQ
Sbjct: 81 VPDHVLGRMEELGYVMPTDVQREALPVLFSGNDCILHAQ 119
>ref|XP_002871872.1| hypothetical protein ARALYDRAFT_488806 [Arabidopsis lyrata subsp.
lyrata] gi|297317709|gb|EFH48131.1| hypothetical protein
ARALYDRAFT_488806 [Arabidopsis lyrata subsp. lyrata]
Length = 473
Score = 86.3 bits (212), Expect = 4e-15
Identities = 42/83 (50%), Positives = 52/83 (62%)
Frame = +3
Query: 126 RLSNCSLNSASSRASLIPLHVSSLNDTVETSQRASTLREICEGRVPEHVLRRAEEVGFVV 305
R S NS + S + T A TLR+IC+G VPEH+L R EE+GF+
Sbjct: 40 RALKTSSNSRIINLQAVAETSSEIESNSATDTAALTLRKICQGFVPEHILHRMEEIGFIS 99
Query: 306 PTDVQRQALPTLLSGRDCILHAQ 374
PTD+QR+ALPTL +GRDCILHAQ
Sbjct: 100 PTDIQREALPTLFTGRDCILHAQ 122