BLASTX nr result
ID: Sinomenium22_contig00052529
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Sinomenium22_contig00052529 (290 letters) Database: ./nr 38,876,450 sequences; 13,856,398,315 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AEP25223.1| RNA polymerase C2 [Phytolacca americana] 194 8e-48 ref|YP_001294088.1| RNA polymerase beta' subunit [Chloranthus sp... 194 1e-47 gb|ADD31155.1| RNA polymerase beta'' subunit protein [Meliosma a... 194 1e-47 ref|YP_740555.1| RNA polymerase beta'' subunit [Platanus occiden... 194 1e-47 gb|AEP25208.1| RNA polymerase C2 [Ancistrocladus korupensis] 193 2e-47 gb|ABV65700.1| RNA polymerase beta'' subunit (chloroplast) [Berb... 193 2e-47 ref|YP_009026871.1| RNA polymerase beta'' subunit [Magnolia trip... 193 2e-47 ref|YP_008993854.1| RNA polymerase beta' subunit (chloroplast) [... 193 2e-47 ref|YP_008993510.1| RNA polymerase beta' subunit (chloroplast) [... 193 2e-47 ref|YP_008993338.1| RNA polymerase beta' subunit (chloroplast) [... 193 2e-47 ref|YP_008993252.1| RNA polymerase beta' subunit (chloroplast) [... 193 2e-47 ref|YP_007474442.1| RNA polymerase beta subunit-2 (chloroplast) ... 193 2e-47 ref|YP_007474360.1| RNA polymerase beta subunit-2 (chloroplast) ... 193 2e-47 gb|AEX98324.1| RNA polymerase beta subunit-2 (chloroplast) [Magn... 193 2e-47 gb|AEX98241.1| RNA polymerase beta' subunit (chloroplast) [Magno... 193 2e-47 ref|YP_006576105.1| RpoC2 (chloroplast) [Magnolia denudata] gi|3... 193 2e-47 gb|AEP25217.1| RNA polymerase C2 [Mirabilis jalapa] 193 2e-47 gb|AEP25210.1| RNA polymerase C2 [Basella alba] 193 2e-47 gb|AEP25207.1| RNA polymerase C2 [Alluaudia ascendens] 193 2e-47 gb|ADO13876.1| RNA polymerase beta subunit [Hydrocotyle vulgaris] 193 2e-47 >gb|AEP25223.1| RNA polymerase C2 [Phytolacca americana] Length = 1123 Score = 194 bits (494), Expect = 8e-48 Identities = 93/96 (96%), Positives = 96/96 (100%) Frame = +3 Query: 3 GVFTGGTAEHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCYIDLYVTIESQDILHNVNIP 182 GVFTGGTAEHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCYIDLYVTIES+DILHNVNIP Sbjct: 346 GVFTGGTAEHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCYIDLYVTIESEDILHNVNIP 405 Query: 183 PKSFLLVQNDQYVESEQVIAEIRAGASTLNFKKRVR 290 PKSFLLVQNDQY+ESEQVIAEIRAGASTLNFK+RVR Sbjct: 406 PKSFLLVQNDQYIESEQVIAEIRAGASTLNFKERVR 441 >ref|YP_001294088.1| RNA polymerase beta' subunit [Chloranthus spicatus] gi|212277052|sp|A6MMB2.1|RPOC2_CHLSC RecName: Full=DNA-directed RNA polymerase subunit beta''; AltName: Full=PEP; AltName: Full=Plastid-encoded RNA polymerase subunit beta''; Short=RNA polymerase subunit beta'' gi|146744178|gb|ABQ43250.1| RNA polymerase beta' subunit [Chloranthus spicatus] Length = 1389 Score = 194 bits (493), Expect = 1e-47 Identities = 93/96 (96%), Positives = 96/96 (100%) Frame = +3 Query: 3 GVFTGGTAEHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCYIDLYVTIESQDILHNVNIP 182 GVFTGGTAEHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCYIDLYVTIE+QDI+HNVNIP Sbjct: 341 GVFTGGTAEHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCYIDLYVTIENQDIIHNVNIP 400 Query: 183 PKSFLLVQNDQYVESEQVIAEIRAGASTLNFKKRVR 290 PKSFLLVQNDQYVESEQVIAEIRAGASTLNFK+RVR Sbjct: 401 PKSFLLVQNDQYVESEQVIAEIRAGASTLNFKERVR 436 >gb|ADD31155.1| RNA polymerase beta'' subunit protein [Meliosma aff. cuneifolia Moore 333] Length = 1377 Score = 194 bits (492), Expect = 1e-47 Identities = 93/96 (96%), Positives = 95/96 (98%) Frame = +3 Query: 3 GVFTGGTAEHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCYIDLYVTIESQDILHNVNIP 182 GVFTGGTAEHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCYIDLYVTIESQDI+HNVNIP Sbjct: 346 GVFTGGTAEHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCYIDLYVTIESQDIIHNVNIP 405 Query: 183 PKSFLLVQNDQYVESEQVIAEIRAGASTLNFKKRVR 290 PKSFLLVQNDQYVESEQVIAEIRAG STLNFK+RVR Sbjct: 406 PKSFLLVQNDQYVESEQVIAEIRAGTSTLNFKERVR 441 >ref|YP_740555.1| RNA polymerase beta'' subunit [Platanus occidentalis] gi|122166045|sp|Q09G56.1|RPOC2_PLAOC RecName: Full=DNA-directed RNA polymerase subunit beta''; AltName: Full=PEP; AltName: Full=Plastid-encoded RNA polymerase subunit beta''; Short=RNA polymerase subunit beta'' gi|114054374|gb|ABI49768.1| RNA polymerase beta'' subunit [Platanus occidentalis] Length = 1387 Score = 194 bits (492), Expect = 1e-47 Identities = 93/96 (96%), Positives = 95/96 (98%) Frame = +3 Query: 3 GVFTGGTAEHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCYIDLYVTIESQDILHNVNIP 182 GVFTGGTAEHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCYIDLYVTIESQDI+HNVNIP Sbjct: 346 GVFTGGTAEHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCYIDLYVTIESQDIIHNVNIP 405 Query: 183 PKSFLLVQNDQYVESEQVIAEIRAGASTLNFKKRVR 290 PKSFLLVQNDQYVESEQVIAEIRAG STLNFK+RVR Sbjct: 406 PKSFLLVQNDQYVESEQVIAEIRAGTSTLNFKERVR 441 >gb|AEP25208.1| RNA polymerase C2 [Ancistrocladus korupensis] Length = 1074 Score = 193 bits (491), Expect = 2e-47 Identities = 93/96 (96%), Positives = 95/96 (98%) Frame = +3 Query: 3 GVFTGGTAEHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCYIDLYVTIESQDILHNVNIP 182 GVFTGGTAEHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCYIDLYVTIES+DILHNVNIP Sbjct: 279 GVFTGGTAEHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCYIDLYVTIESEDILHNVNIP 338 Query: 183 PKSFLLVQNDQYVESEQVIAEIRAGASTLNFKKRVR 290 PKSFLLVQNDQYVESEQVIAEIRAG STLNFK+RVR Sbjct: 339 PKSFLLVQNDQYVESEQVIAEIRAGTSTLNFKERVR 374 >gb|ABV65700.1| RNA polymerase beta'' subunit (chloroplast) [Berberidopsis corallina] Length = 1389 Score = 193 bits (491), Expect = 2e-47 Identities = 93/96 (96%), Positives = 95/96 (98%) Frame = +3 Query: 3 GVFTGGTAEHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCYIDLYVTIESQDILHNVNIP 182 GVFTGGTAEHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCYIDLYVTIES+DILHNVNIP Sbjct: 346 GVFTGGTAEHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCYIDLYVTIESEDILHNVNIP 405 Query: 183 PKSFLLVQNDQYVESEQVIAEIRAGASTLNFKKRVR 290 PKSFLLVQNDQYVESEQVIAEIRAG STLNFK+RVR Sbjct: 406 PKSFLLVQNDQYVESEQVIAEIRAGTSTLNFKERVR 441 >ref|YP_009026871.1| RNA polymerase beta'' subunit [Magnolia tripetala] gi|608608394|gb|AHW51948.1| RNA polymerase beta'' subunit [Magnolia tripetala] Length = 1382 Score = 193 bits (490), Expect = 2e-47 Identities = 93/96 (96%), Positives = 94/96 (97%) Frame = +3 Query: 3 GVFTGGTAEHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCYIDLYVTIESQDILHNVNIP 182 GVFTGGTAEHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCYIDLYVTIESQDILHNVNIP Sbjct: 345 GVFTGGTAEHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCYIDLYVTIESQDILHNVNIP 404 Query: 183 PKSFLLVQNDQYVESEQVIAEIRAGASTLNFKKRVR 290 PKSFLLVQNDQYVESEQVIAEIRAG ST NFK+RVR Sbjct: 405 PKSFLLVQNDQYVESEQVIAEIRAGTSTFNFKERVR 440 >ref|YP_008993854.1| RNA polymerase beta' subunit (chloroplast) [Magnolia sprengeri] Length = 1382 Score = 193 bits (490), Expect = 2e-47 Identities = 93/96 (96%), Positives = 94/96 (97%) Frame = +3 Query: 3 GVFTGGTAEHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCYIDLYVTIESQDILHNVNIP 182 GVFTGGTAEHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCYIDLYVTIESQDILHNVNIP Sbjct: 345 GVFTGGTAEHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCYIDLYVTIESQDILHNVNIP 404 Query: 183 PKSFLLVQNDQYVESEQVIAEIRAGASTLNFKKRVR 290 PKSFLLVQNDQYVESEQVIAEIRAG ST NFK+RVR Sbjct: 405 PKSFLLVQNDQYVESEQVIAEIRAGTSTFNFKERVR 440 >ref|YP_008993510.1| RNA polymerase beta' subunit (chloroplast) [Magnolia liliifera] Length = 1382 Score = 193 bits (490), Expect = 2e-47 Identities = 93/96 (96%), Positives = 94/96 (97%) Frame = +3 Query: 3 GVFTGGTAEHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCYIDLYVTIESQDILHNVNIP 182 GVFTGGTAEHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCYIDLYVTIESQDILHNVNIP Sbjct: 345 GVFTGGTAEHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCYIDLYVTIESQDILHNVNIP 404 Query: 183 PKSFLLVQNDQYVESEQVIAEIRAGASTLNFKKRVR 290 PKSFLLVQNDQYVESEQVIAEIRAG ST NFK+RVR Sbjct: 405 PKSFLLVQNDQYVESEQVIAEIRAGTSTFNFKERVR 440 >ref|YP_008993338.1| RNA polymerase beta' subunit (chloroplast) [Magnolia pyramidata] Length = 1382 Score = 193 bits (490), Expect = 2e-47 Identities = 93/96 (96%), Positives = 94/96 (97%) Frame = +3 Query: 3 GVFTGGTAEHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCYIDLYVTIESQDILHNVNIP 182 GVFTGGTAEHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCYIDLYVTIESQDILHNVNIP Sbjct: 345 GVFTGGTAEHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCYIDLYVTIESQDILHNVNIP 404 Query: 183 PKSFLLVQNDQYVESEQVIAEIRAGASTLNFKKRVR 290 PKSFLLVQNDQYVESEQVIAEIRAG ST NFK+RVR Sbjct: 405 PKSFLLVQNDQYVESEQVIAEIRAGTSTFNFKERVR 440 >ref|YP_008993252.1| RNA polymerase beta' subunit (chloroplast) [Magnolia dealbata] Length = 1382 Score = 193 bits (490), Expect = 2e-47 Identities = 93/96 (96%), Positives = 94/96 (97%) Frame = +3 Query: 3 GVFTGGTAEHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCYIDLYVTIESQDILHNVNIP 182 GVFTGGTAEHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCYIDLYVTIESQDILHNVNIP Sbjct: 345 GVFTGGTAEHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCYIDLYVTIESQDILHNVNIP 404 Query: 183 PKSFLLVQNDQYVESEQVIAEIRAGASTLNFKKRVR 290 PKSFLLVQNDQYVESEQVIAEIRAG ST NFK+RVR Sbjct: 405 PKSFLLVQNDQYVESEQVIAEIRAGTSTFNFKERVR 440 >ref|YP_007474442.1| RNA polymerase beta subunit-2 (chloroplast) [Magnolia officinalis subsp. biloba] gi|372862494|gb|AEX98574.1| RNA polymerase beta subunit-2 (chloroplast) [Magnolia officinalis subsp. biloba] gi|372862579|gb|AEX98658.1| RNA polymerase beta subunit-2 (chloroplast) [Magnolia officinalis subsp. biloba] gi|372862664|gb|AEX98742.1| RNA polymerase beta subunit-2 (chloroplast) [Magnolia officinalis subsp. biloba] Length = 1382 Score = 193 bits (490), Expect = 2e-47 Identities = 93/96 (96%), Positives = 94/96 (97%) Frame = +3 Query: 3 GVFTGGTAEHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCYIDLYVTIESQDILHNVNIP 182 GVFTGGTAEHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCYIDLYVTIESQDILHNVNIP Sbjct: 345 GVFTGGTAEHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCYIDLYVTIESQDILHNVNIP 404 Query: 183 PKSFLLVQNDQYVESEQVIAEIRAGASTLNFKKRVR 290 PKSFLLVQNDQYVESEQVIAEIRAG ST NFK+RVR Sbjct: 405 PKSFLLVQNDQYVESEQVIAEIRAGTSTFNFKERVR 440 >ref|YP_007474360.1| RNA polymerase beta subunit-2 (chloroplast) [Magnolia officinalis] gi|372862411|gb|AEX98492.1| RNA polymerase beta subunit-2 (chloroplast) [Magnolia officinalis] Length = 1382 Score = 193 bits (490), Expect = 2e-47 Identities = 93/96 (96%), Positives = 94/96 (97%) Frame = +3 Query: 3 GVFTGGTAEHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCYIDLYVTIESQDILHNVNIP 182 GVFTGGTAEHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCYIDLYVTIESQDILHNVNIP Sbjct: 345 GVFTGGTAEHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCYIDLYVTIESQDILHNVNIP 404 Query: 183 PKSFLLVQNDQYVESEQVIAEIRAGASTLNFKKRVR 290 PKSFLLVQNDQYVESEQVIAEIRAG ST NFK+RVR Sbjct: 405 PKSFLLVQNDQYVESEQVIAEIRAGTSTFNFKERVR 440 >gb|AEX98324.1| RNA polymerase beta subunit-2 (chloroplast) [Magnolia denudata] Length = 1382 Score = 193 bits (490), Expect = 2e-47 Identities = 93/96 (96%), Positives = 94/96 (97%) Frame = +3 Query: 3 GVFTGGTAEHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCYIDLYVTIESQDILHNVNIP 182 GVFTGGTAEHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCYIDLYVTIESQDILHNVNIP Sbjct: 345 GVFTGGTAEHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCYIDLYVTIESQDILHNVNIP 404 Query: 183 PKSFLLVQNDQYVESEQVIAEIRAGASTLNFKKRVR 290 PKSFLLVQNDQYVESEQVIAEIRAG ST NFK+RVR Sbjct: 405 PKSFLLVQNDQYVESEQVIAEIRAGTSTFNFKERVR 440 >gb|AEX98241.1| RNA polymerase beta' subunit (chloroplast) [Magnolia liliiflora] Length = 1382 Score = 193 bits (490), Expect = 2e-47 Identities = 93/96 (96%), Positives = 94/96 (97%) Frame = +3 Query: 3 GVFTGGTAEHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCYIDLYVTIESQDILHNVNIP 182 GVFTGGTAEHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCYIDLYVTIESQDILHNVNIP Sbjct: 345 GVFTGGTAEHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCYIDLYVTIESQDILHNVNIP 404 Query: 183 PKSFLLVQNDQYVESEQVIAEIRAGASTLNFKKRVR 290 PKSFLLVQNDQYVESEQVIAEIRAG ST NFK+RVR Sbjct: 405 PKSFLLVQNDQYVESEQVIAEIRAGTSTFNFKERVR 440 >ref|YP_006576105.1| RpoC2 (chloroplast) [Magnolia denudata] gi|343887529|gb|AEM65208.1| RpoC2 [Magnolia denudata] Length = 1382 Score = 193 bits (490), Expect = 2e-47 Identities = 93/96 (96%), Positives = 94/96 (97%) Frame = +3 Query: 3 GVFTGGTAEHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCYIDLYVTIESQDILHNVNIP 182 GVFTGGTAEHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCYIDLYVTIESQDILHNVNIP Sbjct: 345 GVFTGGTAEHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCYIDLYVTIESQDILHNVNIP 404 Query: 183 PKSFLLVQNDQYVESEQVIAEIRAGASTLNFKKRVR 290 PKSFLLVQNDQYVESEQVIAEIRAG ST NFK+RVR Sbjct: 405 PKSFLLVQNDQYVESEQVIAEIRAGTSTFNFKERVR 440 >gb|AEP25217.1| RNA polymerase C2 [Mirabilis jalapa] Length = 844 Score = 193 bits (490), Expect = 2e-47 Identities = 92/96 (95%), Positives = 96/96 (100%) Frame = +3 Query: 3 GVFTGGTAEHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCYIDLYVTIESQDILHNVNIP 182 GVFTGGTAEHVRAPSNGKI+FNEDLVHPTRTRHGHPAFLCYIDLYVTIES+DILHNVNIP Sbjct: 346 GVFTGGTAEHVRAPSNGKIQFNEDLVHPTRTRHGHPAFLCYIDLYVTIESEDILHNVNIP 405 Query: 183 PKSFLLVQNDQYVESEQVIAEIRAGASTLNFKKRVR 290 PKSFLLVQNDQY+ESEQVIAEIRAGASTLNFK+RVR Sbjct: 406 PKSFLLVQNDQYIESEQVIAEIRAGASTLNFKERVR 441 >gb|AEP25210.1| RNA polymerase C2 [Basella alba] Length = 1136 Score = 193 bits (490), Expect = 2e-47 Identities = 93/96 (96%), Positives = 96/96 (100%) Frame = +3 Query: 3 GVFTGGTAEHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCYIDLYVTIESQDILHNVNIP 182 GVFTGGTAEHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCYIDLYVTIES+DILHNVNIP Sbjct: 346 GVFTGGTAEHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCYIDLYVTIESEDILHNVNIP 405 Query: 183 PKSFLLVQNDQYVESEQVIAEIRAGASTLNFKKRVR 290 PKSFLLVQN+QYVESEQVIAEIRAGASTLNFK+RVR Sbjct: 406 PKSFLLVQNNQYVESEQVIAEIRAGASTLNFKERVR 441 >gb|AEP25207.1| RNA polymerase C2 [Alluaudia ascendens] Length = 1101 Score = 193 bits (490), Expect = 2e-47 Identities = 93/96 (96%), Positives = 96/96 (100%) Frame = +3 Query: 3 GVFTGGTAEHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCYIDLYVTIESQDILHNVNIP 182 GVFTGGTAEHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCYIDLYVTIES+DILHNVNIP Sbjct: 315 GVFTGGTAEHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCYIDLYVTIESEDILHNVNIP 374 Query: 183 PKSFLLVQNDQYVESEQVIAEIRAGASTLNFKKRVR 290 PKSFLLVQN+QYVESEQVIAEIRAGASTLNFK+RVR Sbjct: 375 PKSFLLVQNNQYVESEQVIAEIRAGASTLNFKERVR 410 >gb|ADO13876.1| RNA polymerase beta subunit [Hydrocotyle vulgaris] Length = 606 Score = 193 bits (490), Expect = 2e-47 Identities = 92/96 (95%), Positives = 96/96 (100%) Frame = +3 Query: 3 GVFTGGTAEHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCYIDLYVTIESQDILHNVNIP 182 GVFTGGTAEHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCYIDLYVTIES+DI+HNVNIP Sbjct: 332 GVFTGGTAEHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCYIDLYVTIESEDIIHNVNIP 391 Query: 183 PKSFLLVQNDQYVESEQVIAEIRAGASTLNFKKRVR 290 PKSFLLVQNDQYVESEQVIAEIRAGASTLNFK++VR Sbjct: 392 PKSFLLVQNDQYVESEQVIAEIRAGASTLNFKEKVR 427