BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium22_contig00052171
         (649 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006466716.1| PREDICTED: pentatricopeptide repeat-containi...   123   4e-26
emb|CBI17575.3| unnamed protein product [Vitis vinifera]              120   3e-25
ref|XP_007047032.1| Tetratricopeptide repeat-like superfamily pr...   105   2e-20
ref|XP_006366541.1| PREDICTED: pentatricopeptide repeat-containi...    99   9e-19
ref|XP_004228517.1| PREDICTED: pentatricopeptide repeat-containi...    96   7e-18
ref|XP_006383251.1| hypothetical protein POPTR_0005s12880g [Popu...    87   6e-15
ref|XP_002269078.1| PREDICTED: pentatricopeptide repeat-containi...    86   8e-15
ref|XP_006852835.1| hypothetical protein AMTR_s00033p00187020 [A...    86   1e-14
ref|XP_004165472.1| PREDICTED: pentatricopeptide repeat-containi...    86   1e-14
ref|XP_004148464.1| PREDICTED: pentatricopeptide repeat-containi...    86   1e-14
ref|XP_007160534.1| hypothetical protein PHAVU_002G329700g [Phas...    84   3e-14
gb|EYU44305.1| hypothetical protein MIMGU_mgv1a003952mg [Mimulus...    84   5e-14
ref|XP_006292569.1| hypothetical protein CARUB_v10018804mg [Caps...    83   8e-14
ref|XP_006398525.1| hypothetical protein EUTSA_v10000833mg [Eutr...    82   1e-13
ref|XP_003524343.2| PREDICTED: pentatricopeptide repeat-containi...    81   2e-13
ref|NP_178248.2| pentatricopeptide repeat-containing protein [Ar...    81   2e-13
gb|AAD14538.1| predicted by genscan and genefinder [Arabidopsis ...    81   2e-13
ref|XP_007204324.1| hypothetical protein PRUPE_ppa004294mg [Prun...    80   4e-13
ref|XP_003631109.1| Pentatricopeptide repeat-containing protein ...    80   5e-13
ref|XP_006425741.1| hypothetical protein CICLE_v10027297mg [Citr...    79   9e-13

>ref|XP_006466716.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g01390-like [Citrus sinensis]
          Length = 582

 Score =  123 bits (309), Expect = 4e-26
 Identities = 60/114 (52%), Positives = 78/114 (68%)
 Frame = -1

Query: 343 GLVGKYIHVLRPCGSEAFNYWKGSTKGLHTVQHFKNKKTVLPFKRKMKKSMRSLGKLEVK 164
           G + K++H  +P    +FN+ K S KGLHT+QH   KK   P  RK  K ++S    + +
Sbjct: 3   GSIRKFVHCFQP----SFNHCKTSIKGLHTLQHCNPKKPARPDYRKKTKPLKSSNHKQNE 58

Query: 163 EPKVYMRDVINNISKILRYSTWDSAQEQLAKLLKRWDSFTINQVLKTHPPMEKA 2
            PK YMRD I+N+ KIL+YSTWDSAQ+ L  L  +WDS+T+NQVLKTHPPMEKA
Sbjct: 59  TPKAYMRDTISNVYKILKYSTWDSAQDLLKNLPIKWDSYTVNQVLKTHPPMEKA 112


>emb|CBI17575.3| unnamed protein product [Vitis vinifera]
          Length = 656

 Score =  120 bits (302), Expect = 3e-25
 Identities = 61/117 (52%), Positives = 74/117 (63%)
 Frame = -1

Query: 352 GVRGLVGKYIHVLRPCGSEAFNYWKGSTKGLHTVQHFKNKKTVLPFKRKMKKSMRSLGKL 173
           G  G +GK +         AF YWK S + LH++  F+ KK V    +K +K        
Sbjct: 63  GAHGYIGKRMLFSAMGSDRAFGYWKSSIRALHSLHQFRQKKPVQRTSQKFRKPTEK---- 118

Query: 172 EVKEPKVYMRDVINNISKILRYSTWDSAQEQLAKLLKRWDSFTINQVLKTHPPMEKA 2
           E  + K+YMRD I NISKILRY TWDSAQEQL KL  RWDS+T+NQVLK+HPPMEKA
Sbjct: 119 ENVDHKIYMRDTIGNISKILRYLTWDSAQEQLEKLSIRWDSYTVNQVLKSHPPMEKA 175


>ref|XP_007047032.1| Tetratricopeptide repeat-like superfamily protein [Theobroma cacao]
           gi|508699293|gb|EOX91189.1| Tetratricopeptide
           repeat-like superfamily protein [Theobroma cacao]
          Length = 577

 Score =  105 bits (261), Expect = 2e-20
 Identities = 55/97 (56%), Positives = 66/97 (68%)
 Frame = -1

Query: 292 FNYWKGSTKGLHTVQHFKNKKTVLPFKRKMKKSMRSLGKLEVKEPKVYMRDVINNISKIL 113
           F  WK   K LH+   F   K   P K K  K++++  K    EPKVYMRD I+NI KIL
Sbjct: 14  FRRWKYPIKCLHS---FDQHKPETPTKYKFTKTLKNPMKPLEVEPKVYMRDTISNIYKIL 70

Query: 112 RYSTWDSAQEQLAKLLKRWDSFTINQVLKTHPPMEKA 2
           +YSTWD+A+ QL +L  +WDSFTINQVLKTHPPMEKA
Sbjct: 71  KYSTWDAAETQLKRLRIKWDSFTINQVLKTHPPMEKA 107


>ref|XP_006366541.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g01390-like isoform X1 [Solanum tuberosum]
           gi|565402130|ref|XP_006366542.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At2g01390-like isoform X2 [Solanum tuberosum]
          Length = 591

 Score = 99.4 bits (246), Expect = 9e-19
 Identities = 47/87 (54%), Positives = 62/87 (71%)
 Frame = -1

Query: 262 LHTVQHFKNKKTVLPFKRKMKKSMRSLGKLEVKEPKVYMRDVINNISKILRYSTWDSAQE 83
           +H+   FK ++ V    +   KS +S+ K +   PKV+MRD +  IS ILR+STWDSAQE
Sbjct: 36  VHSFTQFKQRRPVRRVNQLPSKSTKSVLKQDTDLPKVFMRDTVTRISHILRFSTWDSAQE 95

Query: 82  QLAKLLKRWDSFTINQVLKTHPPMEKA 2
           QL +L  +WDS+T+NQVLKTHPPMEKA
Sbjct: 96  QLMELPIKWDSYTVNQVLKTHPPMEKA 122


>ref|XP_004228517.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g01390-like [Solanum lycopersicum]
          Length = 591

 Score = 96.3 bits (238), Expect = 7e-18
 Identities = 45/80 (56%), Positives = 59/80 (73%)
 Frame = -1

Query: 241 KNKKTVLPFKRKMKKSMRSLGKLEVKEPKVYMRDVINNISKILRYSTWDSAQEQLAKLLK 62
           K ++ V    R   KS +S+ K ++  PKV+MRD +  IS +LR+STWDSAQEQL +L  
Sbjct: 43  KQRRPVQRVNRLPSKSTKSVPKQDIDLPKVFMRDTVTRISHMLRFSTWDSAQEQLMELPI 102

Query: 61  RWDSFTINQVLKTHPPMEKA 2
           +WDS+T+NQVLKTHPPMEKA
Sbjct: 103 KWDSYTVNQVLKTHPPMEKA 122


>ref|XP_006383251.1| hypothetical protein POPTR_0005s12880g [Populus trichocarpa]
           gi|550338833|gb|ERP61048.1| hypothetical protein
           POPTR_0005s12880g [Populus trichocarpa]
          Length = 517

 Score = 86.7 bits (213), Expect = 6e-15
 Identities = 38/49 (77%), Positives = 45/49 (91%)
 Frame = -1

Query: 148 MRDVINNISKILRYSTWDSAQEQLAKLLKRWDSFTINQVLKTHPPMEKA 2
           MRD+I+NI KIL+YSTWDSAQE+L KL  +WDSFT+NQ+LKTHPPMEKA
Sbjct: 1   MRDIISNIYKILKYSTWDSAQEELTKLNIKWDSFTVNQILKTHPPMEKA 49


>ref|XP_002269078.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g01390-like [Vitis vinifera]
          Length = 519

 Score = 86.3 bits (212), Expect = 8e-15
 Identities = 40/49 (81%), Positives = 43/49 (87%)
 Frame = -1

Query: 148 MRDVINNISKILRYSTWDSAQEQLAKLLKRWDSFTINQVLKTHPPMEKA 2
           MRD I NISKILRY TWDSAQEQL KL  RWDS+T+NQVLK+HPPMEKA
Sbjct: 1   MRDTIGNISKILRYLTWDSAQEQLEKLSIRWDSYTVNQVLKSHPPMEKA 49


>ref|XP_006852835.1| hypothetical protein AMTR_s00033p00187020 [Amborella trichopoda]
           gi|548856449|gb|ERN14302.1| hypothetical protein
           AMTR_s00033p00187020 [Amborella trichopoda]
          Length = 579

 Score = 85.9 bits (211), Expect = 1e-14
 Identities = 44/71 (61%), Positives = 53/71 (74%)
 Frame = -1

Query: 214 KRKMKKSMRSLGKLEVKEPKVYMRDVINNISKILRYSTWDSAQEQLAKLLKRWDSFTINQ 35
           +R  K+  +S  K E ++P VYMR VI NIS+ILR+STW  A EQL  L  +WDSFTINQ
Sbjct: 45  QRLPKRLPKSHEKAEDQKPVVYMRAVIENISRILRFSTWALACEQLENLSIKWDSFTINQ 104

Query: 34  VLKTHPPMEKA 2
           VLK+HPPMEKA
Sbjct: 105 VLKSHPPMEKA 115


>ref|XP_004165472.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g01390-like [Cucumis sativus]
          Length = 737

 Score = 85.5 bits (210), Expect = 1e-14
 Identities = 44/94 (46%), Positives = 59/94 (62%)
 Frame = -1

Query: 286 YWKGSTKGLHTVQHFKNKKTVLPFKRKMKKSMRSLGKLEVKEPKVYMRDVINNISKILRY 107
           Y   S+K LH++  +K  K +  F R+ +K  +   K EV  P++Y RD + NI  ILR 
Sbjct: 91  YQNISSKCLHSLHQYKRDKPISRFSRQSRKGTKVAKKEEVI-PRLYTRDTVRNICNILRN 149

Query: 106 STWDSAQEQLAKLLKRWDSFTINQVLKTHPPMEK 5
            +W SAQ+ L  L  RWDS+ INQVLKTHPP+EK
Sbjct: 150 CSWASAQKHLEMLPIRWDSYLINQVLKTHPPLEK 183


>ref|XP_004148464.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g01390-like [Cucumis sativus]
          Length = 1058

 Score = 85.5 bits (210), Expect = 1e-14
 Identities = 44/94 (46%), Positives = 59/94 (62%)
 Frame = -1

Query: 286 YWKGSTKGLHTVQHFKNKKTVLPFKRKMKKSMRSLGKLEVKEPKVYMRDVINNISKILRY 107
           Y   S+K LH++  +K  K +  F R+ +K  +   K EV  P++Y RD + NI  ILR 
Sbjct: 72  YQNISSKCLHSLHQYKRDKPISRFSRQSRKGTKVAKKEEVI-PRLYTRDTVRNICNILRN 130

Query: 106 STWDSAQEQLAKLLKRWDSFTINQVLKTHPPMEK 5
            +W SAQ+ L  L  RWDS+ INQVLKTHPP+EK
Sbjct: 131 CSWASAQKHLEMLPIRWDSYLINQVLKTHPPLEK 164


>ref|XP_007160534.1| hypothetical protein PHAVU_002G329700g [Phaseolus vulgaris]
           gi|561033949|gb|ESW32528.1| hypothetical protein
           PHAVU_002G329700g [Phaseolus vulgaris]
          Length = 600

 Score = 84.3 bits (207), Expect = 3e-14
 Identities = 40/93 (43%), Positives = 60/93 (64%), Gaps = 7/93 (7%)
 Frame = -1

Query: 259 HTVQHFKNKKTVLPFKRKMKKSMRSLGKLEVK-------EPKVYMRDVINNISKILRYST 101
           H  Q  +  K ++PF R    +M+    L++K       EP+VY R+VI  I  +L+YST
Sbjct: 38  HQPQSKQKNKPIVPFSRDNNTNMKKHKNLKLKLKEKKKDEPRVYTRNVIGKIYNMLKYST 97

Query: 100 WDSAQEQLAKLLKRWDSFTINQVLKTHPPMEKA 2
           W++A+ +L  L  +WDS+T+N+VLK+HPPMEKA
Sbjct: 98  WETAESELNNLPLKWDSYTVNRVLKSHPPMEKA 130


>gb|EYU44305.1| hypothetical protein MIMGU_mgv1a003952mg [Mimulus guttatus]
          Length = 552

 Score = 83.6 bits (205), Expect = 5e-14
 Identities = 37/55 (67%), Positives = 44/55 (80%)
 Frame = -1

Query: 166 KEPKVYMRDVINNISKILRYSTWDSAQEQLAKLLKRWDSFTINQVLKTHPPMEKA 2
           +EPK+Y R+ I  I  IL+YSTWDSAQEQL  L  +WDS+T+ QVLKTHPPMEKA
Sbjct: 37  REPKIYSREKITKIYNILKYSTWDSAQEQLDNLPTKWDSYTVTQVLKTHPPMEKA 91


>ref|XP_006292569.1| hypothetical protein CARUB_v10018804mg [Capsella rubella]
           gi|482561276|gb|EOA25467.1| hypothetical protein
           CARUB_v10018804mg [Capsella rubella]
          Length = 662

 Score = 82.8 bits (203), Expect = 8e-14
 Identities = 46/111 (41%), Positives = 67/111 (60%), Gaps = 15/111 (13%)
 Frame = -1

Query: 289 NYWKGSTKGLHTVQHFKNKKTVL---------PFKRKMKKSMRSLGKLEVK------EPK 155
           N+ + ST   + + HF N+++ +         P  R   KS R + K ++       +P+
Sbjct: 81  NFMRFSTIFRNHLIHFSNRQSSVKLLHSLPRPPRPRNPSKSKRFVQKPKLAKTESPDDPR 140

Query: 154 VYMRDVINNISKILRYSTWDSAQEQLAKLLKRWDSFTINQVLKTHPPMEKA 2
           VY RD+++NI  IL+YSTW+SA+EQL  L  RWDS  IN+VLK HPPM+KA
Sbjct: 141 VYTRDIVSNIYNILKYSTWESAREQLPHLRVRWDSHIINRVLKAHPPMQKA 191


>ref|XP_006398525.1| hypothetical protein EUTSA_v10000833mg [Eutrema salsugineum]
           gi|557099614|gb|ESQ39978.1| hypothetical protein
           EUTSA_v10000833mg [Eutrema salsugineum]
          Length = 576

 Score = 82.4 bits (202), Expect = 1e-13
 Identities = 43/93 (46%), Positives = 61/93 (65%)
 Frame = -1

Query: 280 KGSTKGLHTVQHFKNKKTVLPFKRKMKKSMRSLGKLEVKEPKVYMRDVINNISKILRYST 101
           + S K LH++   + +    P KR  +K   +  K +  +P+VY RD+++NI  IL+YST
Sbjct: 18  RSSVKLLHSLPRPRPRN---PTKRFFQKP--NPAKTQTPDPRVYTRDIVSNIYNILKYST 72

Query: 100 WDSAQEQLAKLLKRWDSFTINQVLKTHPPMEKA 2
           W+SA+EQL  L  RWDS  IN+VLK HPPM+KA
Sbjct: 73  WESAREQLPHLGVRWDSHIINRVLKAHPPMQKA 105


>ref|XP_003524343.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g01390-like [Glycine max]
          Length = 591

 Score = 81.3 bits (199), Expect = 2e-13
 Identities = 37/67 (55%), Positives = 52/67 (77%), Gaps = 1/67 (1%)
 Frame = -1

Query: 199 KSMRSLGKLEVK-EPKVYMRDVINNISKILRYSTWDSAQEQLAKLLKRWDSFTINQVLKT 23
           K M+   KL++K EP+ YMR+VI  I  +L+YS+W+SA++ L  L  +WDS+T+NQVLK+
Sbjct: 53  KPMKKAEKLKLKDEPREYMRNVIGKIYNMLKYSSWESAEQDLNNLSMKWDSYTVNQVLKS 112

Query: 22  HPPMEKA 2
           HPPMEKA
Sbjct: 113 HPPMEKA 119


>ref|NP_178248.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|218546783|sp|Q9ZU29.2|PP139_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At2g01390 gi|330250351|gb|AEC05445.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 577

 Score = 81.3 bits (199), Expect = 2e-13
 Identities = 41/97 (42%), Positives = 59/97 (60%)
 Frame = -1

Query: 292 FNYWKGSTKGLHTVQHFKNKKTVLPFKRKMKKSMRSLGKLEVKEPKVYMRDVINNISKIL 113
           F+  + S K LH++   K   +     ++  +  + +    + +P VY RD+++NI  IL
Sbjct: 14  FSNRRSSVKLLHSLPRLKPTNS-----KRFSQKPKLVKTQTLPDPSVYTRDIVSNIYNIL 68

Query: 112 RYSTWDSAQEQLAKLLKRWDSFTINQVLKTHPPMEKA 2
           +YS WDSAQEQL  L  RWDS  IN+VLK HPPM+KA
Sbjct: 69  KYSNWDSAQEQLPHLGVRWDSHIINRVLKAHPPMQKA 105


>gb|AAD14538.1| predicted by genscan and genefinder [Arabidopsis thaliana]
          Length = 248

 Score = 81.3 bits (199), Expect = 2e-13
 Identities = 41/97 (42%), Positives = 59/97 (60%)
 Frame = -1

Query: 292 FNYWKGSTKGLHTVQHFKNKKTVLPFKRKMKKSMRSLGKLEVKEPKVYMRDVINNISKIL 113
           F+  + S K LH++   K   +     ++  +  + +    + +P VY RD+++NI  IL
Sbjct: 14  FSNRRSSVKLLHSLPRLKPTNS-----KRFSQKPKLVKTQTLPDPSVYTRDIVSNIYNIL 68

Query: 112 RYSTWDSAQEQLAKLLKRWDSFTINQVLKTHPPMEKA 2
           +YS WDSAQEQL  L  RWDS  IN+VLK HPPM+KA
Sbjct: 69  KYSNWDSAQEQLPHLGVRWDSHIINRVLKAHPPMQKA 105


>ref|XP_007204324.1| hypothetical protein PRUPE_ppa004294mg [Prunus persica]
           gi|462399855|gb|EMJ05523.1| hypothetical protein
           PRUPE_ppa004294mg [Prunus persica]
          Length = 518

 Score = 80.5 bits (197), Expect = 4e-13
 Identities = 36/49 (73%), Positives = 43/49 (87%)
 Frame = -1

Query: 148 MRDVINNISKILRYSTWDSAQEQLAKLLKRWDSFTINQVLKTHPPMEKA 2
           MR+ I NI KIL+YSTWDSAQ+QL +L  RWDS+T++QVLKTHPPMEKA
Sbjct: 1   MRETIGNIYKILKYSTWDSAQDQLQRLPIRWDSYTVSQVLKTHPPMEKA 49


>ref|XP_003631109.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355525131|gb|AET05585.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 687

 Score = 80.1 bits (196), Expect = 5e-13
 Identities = 39/82 (47%), Positives = 56/82 (68%)
 Frame = -1

Query: 247 HFKNKKTVLPFKRKMKKSMRSLGKLEVKEPKVYMRDVINNISKILRYSTWDSAQEQLAKL 68
           HFK +  +  F + +    +++    V   + YMR+VI NI + L+YS+WDSAQ+QL  L
Sbjct: 136 HFK-EGLLHGFLQNLFVPSKNIHSQRVPSSREYMRNVIGNIYRTLKYSSWDSAQQQLQNL 194

Query: 67  LKRWDSFTINQVLKTHPPMEKA 2
             +WDS+T+NQVLK+HPPMEKA
Sbjct: 195 PLKWDSYTVNQVLKSHPPMEKA 216


>ref|XP_006425741.1| hypothetical protein CICLE_v10027297mg [Citrus clementina]
           gi|557527731|gb|ESR38981.1| hypothetical protein
           CICLE_v10027297mg [Citrus clementina]
          Length = 522

 Score = 79.3 bits (194), Expect = 9e-13
 Identities = 35/49 (71%), Positives = 42/49 (85%)
 Frame = -1

Query: 148 MRDVINNISKILRYSTWDSAQEQLAKLLKRWDSFTINQVLKTHPPMEKA 2
           MRD I+N+ KIL+YSTWDSAQ+ L  L  +WDS+T+NQVLKTHPPMEKA
Sbjct: 1   MRDTISNVYKILKYSTWDSAQDLLKNLPIKWDSYTVNQVLKTHPPMEKA 49