BLASTX nr result
ID: Sinomenium22_contig00052074
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium22_contig00052074
(356 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004634585.1| PREDICTED: uncharacterized protein LOC101576... 65 1e-08
ref|XP_003239557.1| ubiquitin-conjugating enzyme E2 [Cryptomonas... 64 2e-08
ref|XP_006630440.1| PREDICTED: ubiquitin-conjugating enzyme E2 D... 63 4e-08
ref|XP_005409788.1| PREDICTED: ubiquitin-conjugating enzyme E2 D... 63 4e-08
gb|ACI70025.1| Ubiquitin-conjugating enzyme E2 D4 [Salmo salar] 63 5e-08
gb|ACI69000.1| Ubiquitin-conjugating enzyme E2 D4 [Salmo salar] 63 5e-08
gb|ACI66585.1| Ubiquitin-conjugating enzyme E2 D4 [Salmo salar] ... 63 5e-08
gb|ACI66187.1| Ubiquitin-conjugating enzyme E2 D4 [Salmo salar] 63 5e-08
gb|ESU34918.1| Ubiquitin-conjugating enzyme E2 [Giardia intestin... 62 6e-08
gb|ESA21696.1| hypothetical protein GLOINDRAFT_119348 [Rhizophag... 62 6e-08
gb|ESA16389.1| hypothetical protein GLOINDRAFT_77380 [Rhizophagu... 62 6e-08
gb|EFO65091.1| Ubiquitin-conjugating enzyme E2-17 kDa 3 [Giardia... 62 6e-08
gb|EET01816.1| Ubiquitin-conjugating enzyme E2-17 kDa 3 [Giardia... 62 6e-08
gb|ACI67386.1| Ubiquitin-conjugating enzyme E2 D4 [Salmo salar] ... 62 6e-08
ref|XP_001705864.1| Ubiquitin-conjugating enzyme E2-17 kDa 3 [Gi... 62 6e-08
ref|XP_005409793.1| PREDICTED: ubiquitin-conjugating enzyme E2 D... 62 8e-08
emb|CBK20163.2| unnamed protein product [Blastocystis hominis] 62 8e-08
ref|NP_001075130.1| ubiquitin-conjugating enzyme E2 D4 [Mus musc... 62 8e-08
gb|EXC16958.1| Ubiquitin-conjugating enzyme E2 5A [Morus notabilis] 62 1e-07
pdb|2OXQ|A Chain A, Structure Of The Ubch5 :chip U-Box Complex g... 62 1e-07
>ref|XP_004634585.1| PREDICTED: uncharacterized protein LOC101576776 [Octodon degus]
Length = 313
Score = 65.1 bits (157), Expect = 1e-08
Identities = 30/77 (38%), Positives = 48/77 (62%), Gaps = 6/77 (7%)
Frame = +3
Query: 144 MGIFSRLFASSSTTTKENNGRELGQVS------FAKKRLQKELHSISRDPPSHCSGGPLG 305
+G+ R + S++T +N + +S A KR+Q+EL ++ DPP+HCS GPLG
Sbjct: 135 LGLLRRSWKSNNTDALDNASKPAPNLSPQDLKRLALKRIQRELCGLACDPPTHCSAGPLG 194
Query: 306 KNILIWKGAIIGPSDSP 356
++ +W+G I+GPS SP
Sbjct: 195 NDLFLWQGTIMGPSYSP 211
>ref|XP_003239557.1| ubiquitin-conjugating enzyme E2 [Cryptomonas paramecium]
gi|330038885|ref|XP_003239729.1| ubiquitin-conjugating
enayme E2 [Cryptomonas paramecium]
gi|330040381|ref|XP_003239884.1| ubiquitin-conjugating
enayme E2 [Cryptomonas paramecium]
gi|330040780|ref|XP_003240022.1| ubiquitin-conjugating
enayme E2 [Cryptomonas paramecium]
gi|327206481|gb|AEA38659.1| ubiquitin-conjugating enzyme
E2 [Cryptomonas paramecium] gi|327206654|gb|AEA38831.1|
ubiquitin-conjugating enayme E2 [Cryptomonas paramecium]
gi|327206810|gb|AEA38986.1| ubiquitin-conjugating enayme
E2 [Cryptomonas paramecium] gi|327206948|gb|AEA39124.1|
ubiquitin-conjugating enayme E2 [Cryptomonas paramecium]
Length = 147
Score = 63.9 bits (154), Expect = 2e-08
Identities = 27/43 (62%), Positives = 34/43 (79%)
Frame = +3
Query: 228 AKKRLQKELHSISRDPPSHCSGGPLGKNILIWKGAIIGPSDSP 356
A KR+QKEL ++RDPPS+CS GP+G+NI W +IIGP DSP
Sbjct: 2 AAKRIQKELKDLARDPPSNCSAGPVGENIFKWTASIIGPVDSP 44
>ref|XP_006630440.1| PREDICTED: ubiquitin-conjugating enzyme E2 D4-like [Lepisosteus
oculatus]
Length = 147
Score = 63.2 bits (152), Expect = 4e-08
Identities = 25/43 (58%), Positives = 33/43 (76%)
Frame = +3
Query: 228 AKKRLQKELHSISRDPPSHCSGGPLGKNILIWKGAIIGPSDSP 356
A KR+QKELH + RDPP+ CS GP+G ++ W+ I+GPSDSP
Sbjct: 2 ALKRIQKELHDLQRDPPAQCSAGPVGDDLFHWQATIMGPSDSP 44
>ref|XP_005409788.1| PREDICTED: ubiquitin-conjugating enzyme E2 D2-like isoform X1
[Chinchilla lanigera] gi|533194058|ref|XP_005409789.1|
PREDICTED: ubiquitin-conjugating enzyme E2 D2-like
isoform X2 [Chinchilla lanigera]
Length = 147
Score = 63.2 bits (152), Expect = 4e-08
Identities = 25/43 (58%), Positives = 35/43 (81%)
Frame = +3
Query: 228 AKKRLQKELHSISRDPPSHCSGGPLGKNILIWKGAIIGPSDSP 356
A KR+QKEL ++RDPPSHCS GP+G++ +W+ I+GP+DSP
Sbjct: 2 ALKRIQKELVDLARDPPSHCSAGPVGEDPFLWQATIMGPNDSP 44
>gb|ACI70025.1| Ubiquitin-conjugating enzyme E2 D4 [Salmo salar]
Length = 147
Score = 62.8 bits (151), Expect = 5e-08
Identities = 24/43 (55%), Positives = 34/43 (79%)
Frame = +3
Query: 228 AKKRLQKELHSISRDPPSHCSGGPLGKNILIWKGAIIGPSDSP 356
A KR+QKELH + RDPP+ CS GP+G+++ W+ I+GP+DSP
Sbjct: 2 ALKRIQKELHDLQRDPPAQCSAGPVGEDLFHWQATIMGPTDSP 44
>gb|ACI69000.1| Ubiquitin-conjugating enzyme E2 D4 [Salmo salar]
Length = 147
Score = 62.8 bits (151), Expect = 5e-08
Identities = 24/43 (55%), Positives = 34/43 (79%)
Frame = +3
Query: 228 AKKRLQKELHSISRDPPSHCSGGPLGKNILIWKGAIIGPSDSP 356
A KR+QKELH + RDPP+ CS GP+G+++ W+ I+GP+DSP
Sbjct: 2 ALKRIQKELHDLQRDPPAQCSAGPVGEDLFHWQATIMGPTDSP 44
>gb|ACI66585.1| Ubiquitin-conjugating enzyme E2 D4 [Salmo salar]
gi|209732416|gb|ACI67077.1| Ubiquitin-conjugating enzyme
E2 D4 [Salmo salar] gi|209737676|gb|ACI69707.1|
Ubiquitin-conjugating enzyme E2 D4 [Salmo salar]
gi|225703868|gb|ACO07780.1| Ubiquitin-conjugating enzyme
E2 D1 [Oncorhynchus mykiss] gi|225704676|gb|ACO08184.1|
Ubiquitin-conjugating enzyme E2 D1 [Oncorhynchus mykiss]
gi|225705590|gb|ACO08641.1| Ubiquitin-conjugating enzyme
E2 D1 [Oncorhynchus mykiss] gi|225715208|gb|ACO13450.1|
Ubiquitin-conjugating enzyme E2 D4 [Esox lucius]
gi|290561405|gb|ADD38103.1| Ubiquitin-conjugating enzyme
E2 D4 [Lepeophtheirus salmonis]
gi|303666217|gb|ADM16218.1| Ubiquitin-conjugating enzyme
E2 D4 [Salmo salar] gi|469832426|gb|AGH92565.1|
ubiquitin-conjugating enzyme E2D4 [Salmo salar]
gi|469832432|gb|AGH92568.1| ubiquitin-conjugating enzyme
E2D4 [Salmo salar]
Length = 147
Score = 62.8 bits (151), Expect = 5e-08
Identities = 24/43 (55%), Positives = 34/43 (79%)
Frame = +3
Query: 228 AKKRLQKELHSISRDPPSHCSGGPLGKNILIWKGAIIGPSDSP 356
A KR+QKELH + RDPP+ CS GP+G+++ W+ I+GP+DSP
Sbjct: 2 ALKRIQKELHDLQRDPPAQCSAGPVGEDLFHWQATIMGPTDSP 44
>gb|ACI66187.1| Ubiquitin-conjugating enzyme E2 D4 [Salmo salar]
Length = 133
Score = 62.8 bits (151), Expect = 5e-08
Identities = 24/43 (55%), Positives = 34/43 (79%)
Frame = +3
Query: 228 AKKRLQKELHSISRDPPSHCSGGPLGKNILIWKGAIIGPSDSP 356
A KR+QKELH + RDPP+ CS GP+G+++ W+ I+GP+DSP
Sbjct: 2 ALKRIQKELHDLQRDPPAQCSAGPVGEDLFHWQATIMGPTDSP 44
>gb|ESU34918.1| Ubiquitin-conjugating enzyme E2 [Giardia intestinalis]
Length = 202
Score = 62.4 bits (150), Expect = 6e-08
Identities = 24/43 (55%), Positives = 33/43 (76%)
Frame = +3
Query: 228 AKKRLQKELHSISRDPPSHCSGGPLGKNILIWKGAIIGPSDSP 356
A+KR+QKEL +DPP +CSGGP+G +I +W+ I+GP DSP
Sbjct: 55 AQKRIQKELKEFQKDPPMNCSGGPVGDDISVWRACILGPKDSP 97
>gb|ESA21696.1| hypothetical protein GLOINDRAFT_119348 [Rhizophagus irregularis
DAOM 181602]
Length = 150
Score = 62.4 bits (150), Expect = 6e-08
Identities = 25/43 (58%), Positives = 32/43 (74%)
Frame = +3
Query: 228 AKKRLQKELHSISRDPPSHCSGGPLGKNILIWKGAIIGPSDSP 356
A KR+ KELH + RDPPS CS GP+G ++ W+ I+GPSDSP
Sbjct: 2 ALKRINKELHDLGRDPPSSCSAGPIGDDLFHWQATIMGPSDSP 44
>gb|ESA16389.1| hypothetical protein GLOINDRAFT_77380 [Rhizophagus irregularis DAOM
181602] gi|595441924|gb|EXX54085.1| E2
ubiquitin-conjugating protein UBC5 [Rhizophagus
irregularis DAOM 197198w]
Length = 165
Score = 62.4 bits (150), Expect = 6e-08
Identities = 25/43 (58%), Positives = 32/43 (74%)
Frame = +3
Query: 228 AKKRLQKELHSISRDPPSHCSGGPLGKNILIWKGAIIGPSDSP 356
A KR+ KELH + RDPPS CS GP+G ++ W+ I+GPSDSP
Sbjct: 2 ALKRINKELHDLGRDPPSSCSAGPIGDDLFHWQATIMGPSDSP 44
>gb|EFO65091.1| Ubiquitin-conjugating enzyme E2-17 kDa 3 [Giardia lamblia P15]
Length = 149
Score = 62.4 bits (150), Expect = 6e-08
Identities = 24/43 (55%), Positives = 33/43 (76%)
Frame = +3
Query: 228 AKKRLQKELHSISRDPPSHCSGGPLGKNILIWKGAIIGPSDSP 356
A+KR+QKEL +DPP +CSGGP+G +I +W+ I+GP DSP
Sbjct: 2 AQKRIQKELKEFQKDPPMNCSGGPVGDDISVWRACILGPKDSP 44
>gb|EET01816.1| Ubiquitin-conjugating enzyme E2-17 kDa 3 [Giardia intestinalis ATCC
50581] gi|559178824|gb|ESU40903.1| Ubiquitin-conjugating
enzyme E2 [Giardia intestinalis]
Length = 149
Score = 62.4 bits (150), Expect = 6e-08
Identities = 24/43 (55%), Positives = 33/43 (76%)
Frame = +3
Query: 228 AKKRLQKELHSISRDPPSHCSGGPLGKNILIWKGAIIGPSDSP 356
A+KR+QKEL +DPP +CSGGP+G +I +W+ I+GP DSP
Sbjct: 2 AQKRIQKELKEFQKDPPMNCSGGPVGDDISVWRACILGPKDSP 44
>gb|ACI67386.1| Ubiquitin-conjugating enzyme E2 D4 [Salmo salar]
gi|209733892|gb|ACI67815.1| Ubiquitin-conjugating enzyme
E2 D4 [Salmo salar] gi|221221038|gb|ACM09180.1|
Ubiquitin-conjugating enzyme E2 D4 [Salmo salar]
gi|221221518|gb|ACM09420.1| Ubiquitin-conjugating enzyme
E2 D4 [Salmo salar] gi|303666329|gb|ADM16225.1|
Ubiquitin-conjugating enzyme E2 D4 [Salmo salar]
Length = 147
Score = 62.4 bits (150), Expect = 6e-08
Identities = 24/43 (55%), Positives = 33/43 (76%)
Frame = +3
Query: 228 AKKRLQKELHSISRDPPSHCSGGPLGKNILIWKGAIIGPSDSP 356
A KR+QKELH + RDPP+ CS GP+G+++ W+ I+GP DSP
Sbjct: 2 ALKRIQKELHDLQRDPPAQCSAGPVGEDLFHWQATIMGPGDSP 44
>ref|XP_001705864.1| Ubiquitin-conjugating enzyme E2-17 kDa 3 [Giardia lamblia ATCC
50803] gi|157433954|gb|EDO78190.1| Ubiquitin-conjugating
enzyme E2-17 kDa 3 [Giardia lamblia ATCC 50803]
Length = 178
Score = 62.4 bits (150), Expect = 6e-08
Identities = 24/43 (55%), Positives = 33/43 (76%)
Frame = +3
Query: 228 AKKRLQKELHSISRDPPSHCSGGPLGKNILIWKGAIIGPSDSP 356
A+KR+QKEL +DPP +CSGGP+G +I +W+ I+GP DSP
Sbjct: 31 AQKRIQKELKEFQKDPPMNCSGGPVGDDISVWRACILGPKDSP 73
>ref|XP_005409793.1| PREDICTED: ubiquitin-conjugating enzyme E2 D4-like [Chinchilla
lanigera]
Length = 147
Score = 62.0 bits (149), Expect = 8e-08
Identities = 23/43 (53%), Positives = 35/43 (81%)
Frame = +3
Query: 228 AKKRLQKELHSISRDPPSHCSGGPLGKNILIWKGAIIGPSDSP 356
A KR+QKEL ++ DPP+HCS GP+G+++ +W+ I+GP+DSP
Sbjct: 2 ALKRIQKELIDLAHDPPAHCSAGPVGEDLFLWQATIMGPNDSP 44
>emb|CBK20163.2| unnamed protein product [Blastocystis hominis]
Length = 147
Score = 62.0 bits (149), Expect = 8e-08
Identities = 26/43 (60%), Positives = 32/43 (74%)
Frame = +3
Query: 228 AKKRLQKELHSISRDPPSHCSGGPLGKNILIWKGAIIGPSDSP 356
A +RL KEL S+SRDPP +CS GP+G NI W+ I+GP DSP
Sbjct: 2 ALRRLNKELQSLSRDPPPNCSAGPIGDNIFKWQATIMGPKDSP 44
>ref|NP_001075130.1| ubiquitin-conjugating enzyme E2 D4 [Mus musculus]
gi|148701483|gb|EDL33430.1| Similar to
ubiquitin-conjugating enzyme E2D 2 [Mus musculus]
Length = 155
Score = 62.0 bits (149), Expect = 8e-08
Identities = 25/45 (55%), Positives = 35/45 (77%)
Frame = +3
Query: 222 SFAKKRLQKELHSISRDPPSHCSGGPLGKNILIWKGAIIGPSDSP 356
+ A KR+QKEL +IS+DPP+HCS GP+ +N+ W+ I+GP DSP
Sbjct: 8 AMALKRIQKELVAISQDPPAHCSAGPVAENMFHWQATIMGPEDSP 52
>gb|EXC16958.1| Ubiquitin-conjugating enzyme E2 5A [Morus notabilis]
Length = 303
Score = 61.6 bits (148), Expect = 1e-07
Identities = 36/88 (40%), Positives = 53/88 (60%), Gaps = 9/88 (10%)
Frame = +3
Query: 120 LCRLFDSIMGIFSRLFASSSTTTKENNGRELGQVS-------FAKKRLQKELHSISRDPP 278
LC L +SIMG FSR+ + SS + +N Q+ FA+KR++KEL S DP
Sbjct: 113 LCILVNSIMGFFSRIKSFSSPKSSSSNANGKEQIDETNRFKEFAEKRIRKELQMRSEDPI 172
Query: 279 SHCSGGPLGK--NILIWKGAIIGPSDSP 356
++CS G +G +I +GA++GPSD+P
Sbjct: 173 TNCSYGVVGNGDDIFHLQGAVMGPSDTP 200
>pdb|2OXQ|A Chain A, Structure Of The Ubch5 :chip U-Box Complex
gi|168177065|pdb|2OXQ|B Chain B, Structure Of The Ubch5
:chip U-Box Complex
Length = 152
Score = 61.6 bits (148), Expect = 1e-07
Identities = 25/45 (55%), Positives = 33/45 (73%)
Frame = +3
Query: 222 SFAKKRLQKELHSISRDPPSHCSGGPLGKNILIWKGAIIGPSDSP 356
S A KR+QKEL + RDPP+ CS GP+G ++ W+ I+GPSDSP
Sbjct: 5 SMALKRIQKELQDLQRDPPAQCSAGPVGDDLFHWQATIMGPSDSP 49