BLASTX nr result
ID: Sinomenium22_contig00052013
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium22_contig00052013
(636 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN75040.1| hypothetical protein VITISV_026478 [Vitis vinifera] 48 9e-07
emb|CAN72548.1| hypothetical protein VITISV_035350 [Vitis vinifera] 47 1e-06
emb|CAN70431.1| hypothetical protein VITISV_030910 [Vitis vinifera] 47 2e-06
emb|CAN62833.1| hypothetical protein VITISV_012130 [Vitis vinifera] 47 2e-06
emb|CAN68820.1| hypothetical protein VITISV_009132 [Vitis vinifera] 47 3e-06
emb|CAN73452.1| hypothetical protein VITISV_028992 [Vitis vinifera] 48 5e-06
emb|CAN64256.1| hypothetical protein VITISV_040148 [Vitis vinifera] 46 6e-06
ref|XP_004162147.1| PREDICTED: putative ribonuclease H protein A... 41 7e-06
emb|CAN63022.1| hypothetical protein VITISV_042518 [Vitis vinifera] 45 7e-06
>emb|CAN75040.1| hypothetical protein VITISV_026478 [Vitis vinifera]
Length = 1776
Score = 47.8 bits (112), Expect(3) = 9e-07
Identities = 23/42 (54%), Positives = 27/42 (64%)
Frame = +3
Query: 3 GKINTVDLLQIRNLSQSLSPHCCILCKEKGELGDHLFFVVPL 128
GK+NT D LQ+R +SL P CILCK GE DHLF P+
Sbjct: 1624 GKVNTNDKLQLRRPYKSLCPQWCILCKGNGESIDHLFLHCPV 1665
Score = 28.5 bits (62), Expect(3) = 9e-07
Identities = 10/29 (34%), Positives = 20/29 (68%)
Frame = +2
Query: 242 KNVRRAVVMEVIWSIREERNRRIFDEKLR 328
K + + + ++W + +ERN+RIF++K R
Sbjct: 1705 KTLWQVACLTLVWIVWQERNKRIFEDKGR 1733
Score = 21.9 bits (45), Expect(3) = 9e-07
Identities = 10/24 (41%), Positives = 12/24 (50%)
Frame = +1
Query: 112 FL*CPFAISIWEKWKEYAYLSIQP 183
FL CP I +W K + A L P
Sbjct: 1660 FLHCPVTIGLWNKLFKLAGLDWVP 1683
>emb|CAN72548.1| hypothetical protein VITISV_035350 [Vitis vinifera]
Length = 306
Score = 47.0 bits (110), Expect(3) = 1e-06
Identities = 22/42 (52%), Positives = 27/42 (64%)
Frame = +3
Query: 3 GKINTVDLLQIRNLSQSLSPHCCILCKEKGELGDHLFFVVPL 128
GK+NT D LQ+R ++L P CILCK GE DHLF P+
Sbjct: 167 GKVNTNDKLQLRRPYKALCPQWCILCKANGESIDHLFLHCPV 208
Score = 29.3 bits (64), Expect(3) = 1e-06
Identities = 10/29 (34%), Positives = 20/29 (68%)
Frame = +2
Query: 242 KNVRRAVVMEVIWSIREERNRRIFDEKLR 328
K + + + ++W + +ERN+RIF++K R
Sbjct: 248 KTLXQVACLTLVWIVWQERNKRIFEDKGR 276
Score = 21.9 bits (45), Expect(3) = 1e-06
Identities = 10/24 (41%), Positives = 12/24 (50%)
Frame = +1
Query: 112 FL*CPFAISIWEKWKEYAYLSIQP 183
FL CP I +W K + A L P
Sbjct: 203 FLHCPVTIGLWNKLFKMAGLDWVP 226
>emb|CAN70431.1| hypothetical protein VITISV_030910 [Vitis vinifera]
Length = 971
Score = 47.0 bits (110), Expect(3) = 2e-06
Identities = 22/42 (52%), Positives = 27/42 (64%)
Frame = +3
Query: 3 GKINTVDLLQIRNLSQSLSPHCCILCKEKGELGDHLFFVVPL 128
GK+NT D LQ+R ++L P CILCK GE DHLF P+
Sbjct: 727 GKVNTNDKLQLRRPYKALCPQWCILCKANGESIDHLFLHCPV 768
Score = 28.5 bits (62), Expect(3) = 2e-06
Identities = 10/29 (34%), Positives = 20/29 (68%)
Frame = +2
Query: 242 KNVRRAVVMEVIWSIREERNRRIFDEKLR 328
K + + + ++W + +ERN+RIF++K R
Sbjct: 808 KTLWQVACLTLVWIVWQERNKRIFEDKGR 836
Score = 21.9 bits (45), Expect(3) = 2e-06
Identities = 10/24 (41%), Positives = 12/24 (50%)
Frame = +1
Query: 112 FL*CPFAISIWEKWKEYAYLSIQP 183
FL CP I +W K + A L P
Sbjct: 763 FLHCPVTIGLWNKLFKMAGLDWVP 786
>emb|CAN62833.1| hypothetical protein VITISV_012130 [Vitis vinifera]
Length = 1621
Score = 47.0 bits (110), Expect(3) = 2e-06
Identities = 22/42 (52%), Positives = 27/42 (64%)
Frame = +3
Query: 3 GKINTVDLLQIRNLSQSLSPHCCILCKEKGELGDHLFFVVPL 128
GK+NT D LQ+R ++L P CILCK GE DHLF P+
Sbjct: 602 GKVNTNDKLQLRRPYKALCPQWCILCKGNGESIDHLFLHCPI 643
Score = 29.6 bits (65), Expect(3) = 2e-06
Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +2
Query: 266 MEVIWSIREERNRRIFDEKLRD*VGV*DQSHFRAS-WIVASKLFK 397
+ +IW + +ERN RIF++K R V D F +S W ++ F+
Sbjct: 691 LTLIWMVWQERNNRIFEDKGRTEEVVWDLIRFYSSLWASCTEAFR 735
Score = 20.4 bits (41), Expect(3) = 2e-06
Identities = 6/13 (46%), Positives = 8/13 (61%)
Frame = +1
Query: 112 FL*CPFAISIWEK 150
FL CP I +W +
Sbjct: 638 FLHCPITIGLWHR 650
>emb|CAN68820.1| hypothetical protein VITISV_009132 [Vitis vinifera]
Length = 1910
Score = 47.4 bits (111), Expect(3) = 3e-06
Identities = 23/42 (54%), Positives = 27/42 (64%)
Frame = +3
Query: 3 GKINTVDLLQIRNLSQSLSPHCCILCKEKGELGDHLFFVVPL 128
GK+NT D LQ+R +SL P CILCK GE DHLF P+
Sbjct: 1786 GKVNTNDKLQLRRPYKSLYPQWCILCKGNGESIDHLFLHCPV 1827
Score = 27.7 bits (60), Expect(3) = 3e-06
Identities = 10/29 (34%), Positives = 19/29 (65%)
Frame = +2
Query: 242 KNVRRAVVMEVIWSIREERNRRIFDEKLR 328
K + + + ++W + +ERN RIF++K R
Sbjct: 1867 KTLCQVACLTLVWIVWQERNNRIFEDKGR 1895
Score = 21.2 bits (43), Expect(3) = 3e-06
Identities = 7/13 (53%), Positives = 8/13 (61%)
Frame = +1
Query: 112 FL*CPFAISIWEK 150
FL CP I +W K
Sbjct: 1822 FLHCPVTIGLWNK 1834
>emb|CAN73452.1| hypothetical protein VITISV_028992 [Vitis vinifera]
Length = 298
Score = 47.8 bits (112), Expect(3) = 5e-06
Identities = 23/42 (54%), Positives = 27/42 (64%)
Frame = +3
Query: 3 GKINTVDLLQIRNLSQSLSPHCCILCKEKGELGDHLFFVVPL 128
GK+NT D LQ+R +SL P CILCK GE DHLF P+
Sbjct: 146 GKVNTNDKLQLRRPYKSLCPQWCILCKGNGESIDHLFLHCPV 187
Score = 26.9 bits (58), Expect(3) = 5e-06
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = +2
Query: 242 KNVRRAVVMEVIWSIREERNRRIFDEKLR 328
K + + + +W + +ERN RIF++K R
Sbjct: 227 KTLWQVACLTFVWIVWQERNNRIFEDKGR 255
Score = 21.2 bits (43), Expect(3) = 5e-06
Identities = 7/13 (53%), Positives = 8/13 (61%)
Frame = +1
Query: 112 FL*CPFAISIWEK 150
FL CP I +W K
Sbjct: 182 FLHCPVTIGLWNK 194
>emb|CAN64256.1| hypothetical protein VITISV_040148 [Vitis vinifera]
Length = 2099
Score = 46.2 bits (108), Expect(2) = 6e-06
Identities = 20/41 (48%), Positives = 27/41 (65%)
Frame = +3
Query: 6 KINTVDLLQIRNLSQSLSPHCCILCKEKGELGDHLFFVVPL 128
K+NT D+LQ+R ++LSP CILC + GE DH+F L
Sbjct: 1807 KVNTNDMLQVRRPYKALSPDICILCMKHGESADHIFLYCSL 1847
Score = 30.0 bits (66), Expect(2) = 6e-06
Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = +2
Query: 233 LALKNVRRAVVMEVIWSIREERNRRIFDEKLRD*VGV*DQSHFRAS-WIVASK 388
+AL +++++W ERN RIF++K R+ + D F AS W SK
Sbjct: 1887 IALWQAANIALIQIVW---RERNARIFEDKARNSESLWDSIVFLASLWAYCSK 1936
>ref|XP_004162147.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Cucumis
sativus]
Length = 218
Score = 40.8 bits (94), Expect(2) = 7e-06
Identities = 29/80 (36%), Positives = 38/80 (47%), Gaps = 2/80 (2%)
Frame = +2
Query: 164 LIFPFNPPSCKDLFXXXXXXLFPLALKNVRRAVVMEVIWSIREERNRRIF--DEKLRD*V 337
L+FP + P CKDLF + + + +V +W+I ERNRRIF +EK D V
Sbjct: 130 LLFPNSTPLCKDLFKTKGKTQKQI----INQHLVAATLWNIWNERNRRIFKEEEKKADSV 185
Query: 338 GV*DQSHFRASWIVASKLFK 397
D W S LFK
Sbjct: 186 WE-DTQAIMGLWTSRSSLFK 204
Score = 35.4 bits (80), Expect(2) = 7e-06
Identities = 18/39 (46%), Positives = 23/39 (58%)
Frame = +3
Query: 9 INTVDLLQIRNLSQSLSPHCCILCKEKGELGDHLFFVVP 125
INT+D+LQ R + ++ P CILCK E HLF P
Sbjct: 75 INTMDMLQRRLPTWTIKPSWCILCKAAEEDRQHLFTHCP 113
>emb|CAN63022.1| hypothetical protein VITISV_042518 [Vitis vinifera]
Length = 311
Score = 45.4 bits (106), Expect(3) = 7e-06
Identities = 22/42 (52%), Positives = 26/42 (61%)
Frame = +3
Query: 3 GKINTVDLLQIRNLSQSLSPHCCILCKEKGELGDHLFFVVPL 128
GK+NT D LQ+R +SL P CILCK E DHLF P+
Sbjct: 159 GKVNTNDKLQLRRPYKSLCPQWCILCKGNRESIDHLFLYCPV 200
Score = 27.7 bits (60), Expect(3) = 7e-06
Identities = 10/29 (34%), Positives = 19/29 (65%)
Frame = +2
Query: 242 KNVRRAVVMEVIWSIREERNRRIFDEKLR 328
K + + + ++W + +ERN RIF++K R
Sbjct: 240 KTLWQVACLTLVWIVWQERNNRIFEDKGR 268
Score = 21.9 bits (45), Expect(3) = 7e-06
Identities = 10/24 (41%), Positives = 12/24 (50%)
Frame = +1
Query: 112 FL*CPFAISIWEKWKEYAYLSIQP 183
FL CP I +W K + A L P
Sbjct: 195 FLYCPVTIGLWNKLFKLAGLDWVP 218