BLASTX nr result
ID: Sinomenium22_contig00051369
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Sinomenium22_contig00051369 (518 letters) Database: ./nr 38,876,450 sequences; 13,856,398,315 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CAN68489.1| hypothetical protein VITISV_037543 [Vitis vinifera] 51 2e-07 emb|CDH30699.1| putative Ty1-copia-like retrotransposon [Cercis ... 49 3e-07 emb|CAN83798.1| hypothetical protein VITISV_039072 [Vitis vinifera] 42 1e-06 emb|CAN82221.1| hypothetical protein VITISV_015226 [Vitis vinifera] 48 2e-06 >emb|CAN68489.1| hypothetical protein VITISV_037543 [Vitis vinifera] Length = 1449 Score = 51.2 bits (121), Expect(2) = 2e-07 Identities = 25/63 (39%), Positives = 34/63 (53%) Frame = +1 Query: 1 NQVLIGDGKPISILHTGXXXXXXXXXXXXXXXXXXXTDISEPLISVSRLCSDNNAVVEFH 180 ++V++G+GK + ILHTG DI+ LISVS+ C+DNN EFH Sbjct: 405 DKVIVGNGKHLRILHTGTTFFPSSSKTFQLRQVLHVPDIATNLISVSQFCADNNTFFEFH 464 Query: 181 PSF 189 P F Sbjct: 465 PRF 467 Score = 29.3 bits (64), Expect(2) = 2e-07 Identities = 11/26 (42%), Positives = 19/26 (73%) Frame = +3 Query: 180 PLLFVIKDRQTHSPLLRGTIDNGLYK 257 P F +KD+ T LL+G++++GLY+ Sbjct: 465 PRFFFVKDQVTKKILLQGSLEHGLYR 490 >emb|CDH30699.1| putative Ty1-copia-like retrotransposon [Cercis chinensis] Length = 646 Score = 48.9 bits (115), Expect(2) = 3e-07 Identities = 23/63 (36%), Positives = 35/63 (55%) Frame = +1 Query: 1 NQVLIGDGKPISILHTGXXXXXXXXXXXXXXXXXXXTDISEPLISVSRLCSDNNAVVEFH 180 ++V++G+GK + +LHTG I+ L+SV +LC DNNA VEF+ Sbjct: 394 DKVIVGNGKGLYVLHTGHSSIPTSQGALLLKNVLHVPKIAANLVSVQKLCHDNNAYVEFY 453 Query: 181 PSF 189 PS+ Sbjct: 454 PSY 456 Score = 31.2 bits (69), Expect(2) = 3e-07 Identities = 12/27 (44%), Positives = 19/27 (70%) Frame = +3 Query: 180 PLLFVIKDRQTHSPLLRGTIDNGLYKL 260 P F +KD++T + LL+G +D GLY + Sbjct: 454 PSYFAVKDQKTQAILLKGGLDKGLYSV 480 >emb|CAN83798.1| hypothetical protein VITISV_039072 [Vitis vinifera] Length = 787 Score = 42.0 bits (97), Expect(2) = 1e-06 Identities = 23/63 (36%), Positives = 32/63 (50%) Frame = +1 Query: 1 NQVLIGDGKPISILHTGXXXXXXXXXXXXXXXXXXXTDISEPLISVSRLCSDNNAVVEFH 180 + L+G+ K I I H G +IS+ LISV+RL +DN A VEF+ Sbjct: 274 DHALVGNDKQIGISHIGHALLHSSVKPIHLNHVLHTPEISKQLISVTRLGADNKAFVEFY 333 Query: 181 PSF 189 P+F Sbjct: 334 PTF 336 Score = 36.2 bits (82), Expect(2) = 1e-06 Identities = 16/34 (47%), Positives = 23/34 (67%) Frame = +3 Query: 180 PLLFVIKDRQTHSPLLRGTIDNGLYKLQLTVTLS 281 P F++KD+QT LL+G ++ GLYKL TL+ Sbjct: 334 PTFFLVKDQQTKQLLLQGHLEXGLYKLAQPTTLT 367 >emb|CAN82221.1| hypothetical protein VITISV_015226 [Vitis vinifera] Length = 1007 Score = 47.8 bits (112), Expect(2) = 2e-06 Identities = 24/63 (38%), Positives = 33/63 (52%) Frame = +1 Query: 1 NQVLIGDGKPISILHTGXXXXXXXXXXXXXXXXXXXTDISEPLISVSRLCSDNNAVVEFH 180 ++V++G+GK + ILHT DI+ LISVS+ C+DNN EFH Sbjct: 57 DKVIVGNGKHLRILHTYTTFFPSSSKIFQLRQVLHVPDIATNLISVSQFCADNNTFFEFH 116 Query: 181 PSF 189 P F Sbjct: 117 PRF 119 Score = 29.3 bits (64), Expect(2) = 2e-06 Identities = 11/26 (42%), Positives = 19/26 (73%) Frame = +3 Query: 180 PLLFVIKDRQTHSPLLRGTIDNGLYK 257 P F +KD+ T LL+G++++GLY+ Sbjct: 117 PRFFFVKDQVTKKILLQGSLEHGLYR 142