BLASTX nr result

ID: Sinomenium22_contig00051369 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium22_contig00051369
         (518 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN68489.1| hypothetical protein VITISV_037543 [Vitis vinifera]    51   2e-07
emb|CDH30699.1| putative Ty1-copia-like retrotransposon [Cercis ...    49   3e-07
emb|CAN83798.1| hypothetical protein VITISV_039072 [Vitis vinifera]    42   1e-06
emb|CAN82221.1| hypothetical protein VITISV_015226 [Vitis vinifera]    48   2e-06

>emb|CAN68489.1| hypothetical protein VITISV_037543 [Vitis vinifera]
          Length = 1449

 Score = 51.2 bits (121), Expect(2) = 2e-07
 Identities = 25/63 (39%), Positives = 34/63 (53%)
 Frame = +1

Query: 1   NQVLIGDGKPISILHTGXXXXXXXXXXXXXXXXXXXTDISEPLISVSRLCSDNNAVVEFH 180
           ++V++G+GK + ILHTG                    DI+  LISVS+ C+DNN   EFH
Sbjct: 405 DKVIVGNGKHLRILHTGTTFFPSSSKTFQLRQVLHVPDIATNLISVSQFCADNNTFFEFH 464

Query: 181 PSF 189
           P F
Sbjct: 465 PRF 467



 Score = 29.3 bits (64), Expect(2) = 2e-07
 Identities = 11/26 (42%), Positives = 19/26 (73%)
 Frame = +3

Query: 180 PLLFVIKDRQTHSPLLRGTIDNGLYK 257
           P  F +KD+ T   LL+G++++GLY+
Sbjct: 465 PRFFFVKDQVTKKILLQGSLEHGLYR 490


>emb|CDH30699.1| putative Ty1-copia-like retrotransposon [Cercis chinensis]
          Length = 646

 Score = 48.9 bits (115), Expect(2) = 3e-07
 Identities = 23/63 (36%), Positives = 35/63 (55%)
 Frame = +1

Query: 1   NQVLIGDGKPISILHTGXXXXXXXXXXXXXXXXXXXTDISEPLISVSRLCSDNNAVVEFH 180
           ++V++G+GK + +LHTG                     I+  L+SV +LC DNNA VEF+
Sbjct: 394 DKVIVGNGKGLYVLHTGHSSIPTSQGALLLKNVLHVPKIAANLVSVQKLCHDNNAYVEFY 453

Query: 181 PSF 189
           PS+
Sbjct: 454 PSY 456



 Score = 31.2 bits (69), Expect(2) = 3e-07
 Identities = 12/27 (44%), Positives = 19/27 (70%)
 Frame = +3

Query: 180 PLLFVIKDRQTHSPLLRGTIDNGLYKL 260
           P  F +KD++T + LL+G +D GLY +
Sbjct: 454 PSYFAVKDQKTQAILLKGGLDKGLYSV 480


>emb|CAN83798.1| hypothetical protein VITISV_039072 [Vitis vinifera]
          Length = 787

 Score = 42.0 bits (97), Expect(2) = 1e-06
 Identities = 23/63 (36%), Positives = 32/63 (50%)
 Frame = +1

Query: 1   NQVLIGDGKPISILHTGXXXXXXXXXXXXXXXXXXXTDISEPLISVSRLCSDNNAVVEFH 180
           +  L+G+ K I I H G                    +IS+ LISV+RL +DN A VEF+
Sbjct: 274 DHALVGNDKQIGISHIGHALLHSSVKPIHLNHVLHTPEISKQLISVTRLGADNKAFVEFY 333

Query: 181 PSF 189
           P+F
Sbjct: 334 PTF 336



 Score = 36.2 bits (82), Expect(2) = 1e-06
 Identities = 16/34 (47%), Positives = 23/34 (67%)
 Frame = +3

Query: 180 PLLFVIKDRQTHSPLLRGTIDNGLYKLQLTVTLS 281
           P  F++KD+QT   LL+G ++ GLYKL    TL+
Sbjct: 334 PTFFLVKDQQTKQLLLQGHLEXGLYKLAQPTTLT 367


>emb|CAN82221.1| hypothetical protein VITISV_015226 [Vitis vinifera]
          Length = 1007

 Score = 47.8 bits (112), Expect(2) = 2e-06
 Identities = 24/63 (38%), Positives = 33/63 (52%)
 Frame = +1

Query: 1   NQVLIGDGKPISILHTGXXXXXXXXXXXXXXXXXXXTDISEPLISVSRLCSDNNAVVEFH 180
           ++V++G+GK + ILHT                     DI+  LISVS+ C+DNN   EFH
Sbjct: 57  DKVIVGNGKHLRILHTYTTFFPSSSKIFQLRQVLHVPDIATNLISVSQFCADNNTFFEFH 116

Query: 181 PSF 189
           P F
Sbjct: 117 PRF 119



 Score = 29.3 bits (64), Expect(2) = 2e-06
 Identities = 11/26 (42%), Positives = 19/26 (73%)
 Frame = +3

Query: 180 PLLFVIKDRQTHSPLLRGTIDNGLYK 257
           P  F +KD+ T   LL+G++++GLY+
Sbjct: 117 PRFFFVKDQVTKKILLQGSLEHGLYR 142


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