BLASTX nr result

ID: Sinomenium22_contig00051244 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium22_contig00051244
         (327 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA66040.1| hypothetical protein [Beta vulgaris subsp. vulga...    61   1e-07
ref|XP_002515858.1| conserved hypothetical protein [Ricinus comm...    61   2e-07
ref|XP_004292011.1| PREDICTED: uncharacterized protein LOC101291...    59   5e-07
gb|AAD15377.1| putative non-LTR retroelement reverse transcripta...    58   1e-06
ref|XP_004309357.1| PREDICTED: uncharacterized protein LOC101301...    55   8e-06
ref|XP_004233579.1| PREDICTED: uncharacterized protein LOC101260...    55   8e-06
emb|CCA66153.1| hypothetical protein [Beta vulgaris subsp. vulga...    55   8e-06

>emb|CCA66040.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1362

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 25/82 (30%), Positives = 44/82 (53%), Gaps = 2/82 (2%)
 Frame = +1

Query: 37  WLDDHPTPHLTHLPSVGSDHIPILLST--TSHTRKFKPIFRFDHRWLKFDECKELISSIW 210
           W D+ P+  + HLP   SDH P+LL T      R+   +F+F+  WL  +EC +++   W
Sbjct: 205 WCDNFPSWEVVHLPRYRSDHAPLLLKTGVNDSFRRGNKLFKFEAMWLSKEECGKIVEEAW 264

Query: 211 RSHPMENLTEKIQQVRAQILSW 276
                E++T ++ +V   + +W
Sbjct: 265 NGSAGEDITNRLDEVSRSLSTW 286


>ref|XP_002515858.1| conserved hypothetical protein [Ricinus communis]
           gi|223545013|gb|EEF46527.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 269

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 28/86 (32%), Positives = 43/86 (50%), Gaps = 4/86 (4%)
 Frame = +1

Query: 37  WLDDHPTPHLTHLPSVGSDHIPILLSTTSHTRKFKPIFRFDHRWLKFDECKELISSIWRS 216
           W    P   + H   +GSDH P++L   + +   K +FRF+ +W   D CKE++   W  
Sbjct: 182 WRCQFPNAQIIHEYMLGSDHHPLVLMEQAGSFSKKRLFRFEEKWKLRDRCKEVVEDCWME 241

Query: 217 HPME----NLTEKIQQVRAQILSWRK 282
           H  E    N   K+QQ +  ++SW K
Sbjct: 242 HQREDSGWNCVTKLQQCKEGLISWAK 267


>ref|XP_004292011.1| PREDICTED: uncharacterized protein LOC101291306 [Fragaria vesca
           subsp. vesca]
          Length = 948

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 27/87 (31%), Positives = 45/87 (51%), Gaps = 4/87 (4%)
 Frame = +1

Query: 34  HWLDDHPTPHLTHLPSVGSDHIPILLSTTSHTRKFKPIFRFDHRWLKFDECKELISSIW- 210
           +WL   P  +L+HL  +GSDH PI+LST + +RK  P+FRF+  W +  E   ++   W 
Sbjct: 64  NWLLKWPETNLSHLTRLGSDHTPIVLSTDNVSRKGIPLFRFESYWAEEPESSRIVEECWL 123

Query: 211 ---RSHPMENLTEKIQQVRAQILSWRK 282
                 P+      + + +  + SW +
Sbjct: 124 GVTNGRPISTWNSNLNRCKKSLKSWSR 150


>gb|AAD15377.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1044

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 28/90 (31%), Positives = 43/90 (47%)
 Frame = +1

Query: 37  WLDDHPTPHLTHLPSVGSDHIPILLSTTSHTRKFKPIFRFDHRWLKFDECKELISSIWRS 216
           W +D+P     +L   GSDH P+L       +K K +FR+D R    DE   L+   W  
Sbjct: 40  WAEDYPASRCIYLCFEGSDHRPLLTHFDLSKKKKKGVFRYDRRLKNNDEVTALVQEAWNL 99

Query: 217 HPMENLTEKIQQVRAQILSWRKGAPWQIQK 306
           +  + + EKI + R +I+ W +      QK
Sbjct: 100 YDTDIVEEKISRCRLEIVKWSRAKQQSSQK 129


>ref|XP_004309357.1| PREDICTED: uncharacterized protein LOC101301924, partial [Fragaria
           vesca subsp. vesca]
          Length = 212

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 33/99 (33%), Positives = 49/99 (49%), Gaps = 9/99 (9%)
 Frame = +1

Query: 37  WLDDHPTPHLTHLPSVGSDHIPILL-----STTSHTRKFKPIFRFDHRWLKFDECKELIS 201
           WL   P   +THL    SDH+PIL+     S     RK K  FRF+  WL+  + K+++ 
Sbjct: 60  WLQMFPASKVTHLLPSESDHLPILIHIRRSSGRRKKRKRKNKFRFEEFWLREKDVKDVVE 119

Query: 202 SIW----RSHPMENLTEKIQQVRAQILSWRKGAPWQIQK 306
           + W     S+P  ++  KI   R  +LSW +     IQ+
Sbjct: 120 AGWLSGTGSNPFSSVYNKISNTREMLLSWSRTRFGNIQE 158


>ref|XP_004233579.1| PREDICTED: uncharacterized protein LOC101260201 [Solanum
           lycopersicum]
          Length = 1531

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 28/86 (32%), Positives = 42/86 (48%), Gaps = 4/86 (4%)
 Frame = +1

Query: 37  WLDDHPTPHLTHLPSVGSDHIPILLSTTSHTRKFKPIFRFDHRWLKFDECKELISSIW-- 210
           WLD  P+  +THLPSVGSDH P+LL   +        F+F + W + D     + + W  
Sbjct: 493 WLDKMPSSSITHLPSVGSDHCPLLLEMNNTQSTVIKYFKFLNYWTENDSFLSTVENCWKR 552

Query: 211 --RSHPMENLTEKIQQVRAQILSWRK 282
             +  PM  L  K +++   +  W K
Sbjct: 553 QVKGEPMWILHTKFRRLTKTLRCWSK 578


>emb|CCA66153.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1381

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 30/82 (36%), Positives = 43/82 (52%)
 Frame = +1

Query: 31  PHWLDDHPTPHLTHLPSVGSDHIPILLSTTSHTRKFKPIFRFDHRWLKFDECKELISSIW 210
           P WLD  PT  ++ L    SDH PIL+ T       +P FRF   WL    C +LIS  W
Sbjct: 201 PQWLDLFPTLQISLLKRTLSDHCPILVQTKLKNWGPRP-FRFIDAWLSHPGCLKLISKTW 259

Query: 211 RSHPMENLTEKIQQVRAQILSW 276
                 + +EK+++V++ +L W
Sbjct: 260 LEAHDCSFSEKLKKVKSSLLKW 281


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