BLASTX nr result
ID: Sinomenium22_contig00051170
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium22_contig00051170
(290 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002309305.2| DNA polymerase delta small subunit-related f... 148 9e-34
ref|XP_002323281.2| DNA polymerase delta small subunit-related f... 145 7e-33
ref|XP_002279533.1| PREDICTED: DNA polymerase delta small subuni... 145 7e-33
emb|CAN71889.1| hypothetical protein VITISV_040861 [Vitis vinifera] 145 7e-33
ref|XP_007028990.1| DNA polymerase delta small subunit isoform 3... 141 1e-31
ref|XP_007028988.1| DNA polymerase delta small subunit isoform 1... 141 1e-31
ref|XP_007204389.1| hypothetical protein PRUPE_ppa005894mg [Prun... 140 2e-31
ref|XP_004234825.1| PREDICTED: DNA polymerase delta small subuni... 139 5e-31
ref|XP_004234824.1| PREDICTED: DNA polymerase delta small subuni... 139 5e-31
gb|EYU39945.1| hypothetical protein MIMGU_mgv1a006524mg [Mimulus... 138 9e-31
ref|XP_006363773.1| PREDICTED: DNA polymerase delta small subuni... 136 3e-30
ref|XP_006492859.1| PREDICTED: DNA polymerase delta small subuni... 135 4e-30
ref|XP_006411476.1| hypothetical protein EUTSA_v10016664mg [Eutr... 134 1e-29
ref|XP_006429877.1| hypothetical protein CICLE_v10012551mg [Citr... 132 5e-29
ref|NP_973664.1| DNA polymerase delta subunit 2 [Arabidopsis th... 130 2e-28
ref|XP_006294235.1| hypothetical protein CARUB_v10023232mg [Caps... 130 2e-28
ref|XP_004136567.1| PREDICTED: DNA polymerase delta small subuni... 129 5e-28
ref|XP_002530707.1| DNA polymerase delta small subunit, putative... 129 5e-28
ref|NP_001048841.1| Os03g0128500 [Oryza sativa Japonica Group] g... 128 9e-28
dbj|BAA85393.1| unnamed protein product [Oryza sativa Japonica G... 128 9e-28
>ref|XP_002309305.2| DNA polymerase delta small subunit-related family protein [Populus
trichocarpa] gi|550336741|gb|EEE92828.2| DNA polymerase
delta small subunit-related family protein [Populus
trichocarpa]
Length = 454
Score = 148 bits (373), Expect = 9e-34
Identities = 70/94 (74%), Positives = 75/94 (79%)
Frame = +2
Query: 8 FLFPPKEAMEAGVVSNLQRKQSLYQSLDERFEIQKEKYTGQQYSQIYFARLHNMRNILYS 187
F FP ME + N+QRK S YQSLDE F+IQ E Y GQQYSQIYFARLH MR +LYS
Sbjct: 8 FRFPAMTGMEIDIEKNIQRKHSTYQSLDETFDIQNETYRGQQYSQIYFARLHLMRTLLYS 67
Query: 188 LVDKWKPHLPVCTVLGLEEGKECIIVGTLYKHMK 289
LV WKPH+PVCTVLGLEEGKECIIVGTLYKHMK
Sbjct: 68 LVTHWKPHVPVCTVLGLEEGKECIIVGTLYKHMK 101
>ref|XP_002323281.2| DNA polymerase delta small subunit-related family protein [Populus
trichocarpa] gi|550320820|gb|EEF05042.2| DNA polymerase
delta small subunit-related family protein [Populus
trichocarpa]
Length = 442
Score = 145 bits (365), Expect = 7e-33
Identities = 70/87 (80%), Positives = 72/87 (82%)
Frame = +2
Query: 29 AMEAGVVSNLQRKQSLYQSLDERFEIQKEKYTGQQYSQIYFARLHNMRNILYSLVDKWKP 208
AME NLQRKQS YQSLDE FEIQ E Y GQQYSQIYFARLH MR +LYSLV WKP
Sbjct: 3 AMEIDTEKNLQRKQSTYQSLDETFEIQNETYRGQQYSQIYFARLHTMRTLLYSLVTHWKP 62
Query: 209 HLPVCTVLGLEEGKECIIVGTLYKHMK 289
H+PVCTVL LEEGKECIIVGTLYKHMK
Sbjct: 63 HVPVCTVLELEEGKECIIVGTLYKHMK 89
>ref|XP_002279533.1| PREDICTED: DNA polymerase delta small subunit [Vitis vinifera]
gi|297739835|emb|CBI30017.3| unnamed protein product
[Vitis vinifera]
Length = 439
Score = 145 bits (365), Expect = 7e-33
Identities = 67/86 (77%), Positives = 74/86 (86%)
Frame = +2
Query: 32 MEAGVVSNLQRKQSLYQSLDERFEIQKEKYTGQQYSQIYFARLHNMRNILYSLVDKWKPH 211
ME +LQRKQSLY+SLDE+F I+KE Y GQQYSQIYFARLH MR ++YSL+ WKPH
Sbjct: 1 MEIDAEKHLQRKQSLYESLDEKFRIEKETYRGQQYSQIYFARLHMMRTLIYSLIPNWKPH 60
Query: 212 LPVCTVLGLEEGKECIIVGTLYKHMK 289
LPVCTVLGLEEGKECIIVGTLYKHMK
Sbjct: 61 LPVCTVLGLEEGKECIIVGTLYKHMK 86
>emb|CAN71889.1| hypothetical protein VITISV_040861 [Vitis vinifera]
Length = 439
Score = 145 bits (365), Expect = 7e-33
Identities = 67/86 (77%), Positives = 74/86 (86%)
Frame = +2
Query: 32 MEAGVVSNLQRKQSLYQSLDERFEIQKEKYTGQQYSQIYFARLHNMRNILYSLVDKWKPH 211
ME +LQRKQSLY+SLDE+F I+KE Y GQQYSQIYFARLH MR ++YSL+ WKPH
Sbjct: 1 MEIDAEKHLQRKQSLYESLDEKFRIEKETYRGQQYSQIYFARLHMMRTLIYSLIPNWKPH 60
Query: 212 LPVCTVLGLEEGKECIIVGTLYKHMK 289
LPVCTVLGLEEGKECIIVGTLYKHMK
Sbjct: 61 LPVCTVLGLEEGKECIIVGTLYKHMK 86
>ref|XP_007028990.1| DNA polymerase delta small subunit isoform 3 [Theobroma cacao]
gi|508717595|gb|EOY09492.1| DNA polymerase delta small
subunit isoform 3 [Theobroma cacao]
Length = 438
Score = 141 bits (355), Expect = 1e-31
Identities = 69/88 (78%), Positives = 71/88 (80%)
Frame = +2
Query: 26 EAMEAGVVSNLQRKQSLYQSLDERFEIQKEKYTGQQYSQIYFARLHNMRNILYSLVDKWK 205
EAME + LQRKQS Y SLDE FEIQ E Y GQQYSQIYFARLH MR +LYSL WK
Sbjct: 2 EAMEVDSQTQLQRKQSAYLSLDENFEIQNEVYRGQQYSQIYFARLHMMRTLLYSLAPNWK 61
Query: 206 PHLPVCTVLGLEEGKECIIVGTLYKHMK 289
HLPVCTVLGLEEGKECIIVGTLYKHMK
Sbjct: 62 SHLPVCTVLGLEEGKECIIVGTLYKHMK 89
>ref|XP_007028988.1| DNA polymerase delta small subunit isoform 1 [Theobroma cacao]
gi|508717593|gb|EOY09490.1| DNA polymerase delta small
subunit isoform 1 [Theobroma cacao]
Length = 442
Score = 141 bits (355), Expect = 1e-31
Identities = 69/88 (78%), Positives = 71/88 (80%)
Frame = +2
Query: 26 EAMEAGVVSNLQRKQSLYQSLDERFEIQKEKYTGQQYSQIYFARLHNMRNILYSLVDKWK 205
EAME + LQRKQS Y SLDE FEIQ E Y GQQYSQIYFARLH MR +LYSL WK
Sbjct: 2 EAMEVDSQTQLQRKQSAYLSLDENFEIQNEVYRGQQYSQIYFARLHMMRTLLYSLAPNWK 61
Query: 206 PHLPVCTVLGLEEGKECIIVGTLYKHMK 289
HLPVCTVLGLEEGKECIIVGTLYKHMK
Sbjct: 62 SHLPVCTVLGLEEGKECIIVGTLYKHMK 89
>ref|XP_007204389.1| hypothetical protein PRUPE_ppa005894mg [Prunus persica]
gi|462399920|gb|EMJ05588.1| hypothetical protein
PRUPE_ppa005894mg [Prunus persica]
Length = 438
Score = 140 bits (352), Expect = 2e-31
Identities = 67/86 (77%), Positives = 70/86 (81%)
Frame = +2
Query: 32 MEAGVVSNLQRKQSLYQSLDERFEIQKEKYTGQQYSQIYFARLHNMRNILYSLVDKWKPH 211
ME NLQRK S Y LDERFEIQKE Y GQQYSQIYFARLH MR +LYSLV WKPH
Sbjct: 1 MEIDSEKNLQRKHSTYNLLDERFEIQKEMYRGQQYSQIYFARLHMMRTLLYSLVPNWKPH 60
Query: 212 LPVCTVLGLEEGKECIIVGTLYKHMK 289
LPVCTVLGLE+ KECI+VGTLYKHMK
Sbjct: 61 LPVCTVLGLEKDKECIVVGTLYKHMK 86
>ref|XP_004234825.1| PREDICTED: DNA polymerase delta small subunit-like isoform 2
[Solanum lycopersicum]
Length = 442
Score = 139 bits (349), Expect = 5e-31
Identities = 65/78 (83%), Positives = 69/78 (88%)
Frame = +2
Query: 56 LQRKQSLYQSLDERFEIQKEKYTGQQYSQIYFARLHNMRNILYSLVDKWKPHLPVCTVLG 235
L RKQS+YQSLDE F IQKE Y GQQYSQIYFARLH MR +LYS++ WKPHLPVCTVLG
Sbjct: 13 LHRKQSVYQSLDESFGIQKEVYRGQQYSQIYFARLHLMRTLLYSIIPNWKPHLPVCTVLG 72
Query: 236 LEEGKECIIVGTLYKHMK 289
LEEGKECIIVGTLYKHMK
Sbjct: 73 LEEGKECIIVGTLYKHMK 90
>ref|XP_004234824.1| PREDICTED: DNA polymerase delta small subunit-like isoform 1
[Solanum lycopersicum]
Length = 461
Score = 139 bits (349), Expect = 5e-31
Identities = 65/78 (83%), Positives = 69/78 (88%)
Frame = +2
Query: 56 LQRKQSLYQSLDERFEIQKEKYTGQQYSQIYFARLHNMRNILYSLVDKWKPHLPVCTVLG 235
L RKQS+YQSLDE F IQKE Y GQQYSQIYFARLH MR +LYS++ WKPHLPVCTVLG
Sbjct: 13 LHRKQSVYQSLDESFGIQKEVYRGQQYSQIYFARLHLMRTLLYSIIPNWKPHLPVCTVLG 72
Query: 236 LEEGKECIIVGTLYKHMK 289
LEEGKECIIVGTLYKHMK
Sbjct: 73 LEEGKECIIVGTLYKHMK 90
>gb|EYU39945.1| hypothetical protein MIMGU_mgv1a006524mg [Mimulus guttatus]
Length = 440
Score = 138 bits (347), Expect = 9e-31
Identities = 63/78 (80%), Positives = 71/78 (91%)
Frame = +2
Query: 56 LQRKQSLYQSLDERFEIQKEKYTGQQYSQIYFARLHNMRNILYSLVDKWKPHLPVCTVLG 235
++RKQS+Y+SLDE FEIQKE Y GQQYSQIYFARLH MR +LYSL+ WKPHLPVCTVLG
Sbjct: 10 VERKQSIYKSLDESFEIQKEMYRGQQYSQIYFARLHLMRTLLYSLIPTWKPHLPVCTVLG 69
Query: 236 LEEGKECIIVGTLYKHMK 289
LE+GKECIIVGTL+KHMK
Sbjct: 70 LEQGKECIIVGTLFKHMK 87
>ref|XP_006363773.1| PREDICTED: DNA polymerase delta small subunit-like, partial
[Solanum tuberosum]
Length = 175
Score = 136 bits (343), Expect = 3e-30
Identities = 64/78 (82%), Positives = 68/78 (87%)
Frame = +2
Query: 56 LQRKQSLYQSLDERFEIQKEKYTGQQYSQIYFARLHNMRNILYSLVDKWKPHLPVCTVLG 235
L RKQSLYQSLD F IQKE Y GQQYSQIYFARLH MR +LYSL+ WKPHLPVCTVLG
Sbjct: 9 LHRKQSLYQSLDANFGIQKEVYRGQQYSQIYFARLHLMRTLLYSLIPNWKPHLPVCTVLG 68
Query: 236 LEEGKECIIVGTLYKHMK 289
LEEGK+CIIVGTLYKHM+
Sbjct: 69 LEEGKDCIIVGTLYKHMR 86
>ref|XP_006492859.1| PREDICTED: DNA polymerase delta small subunit-like [Citrus
sinensis]
Length = 439
Score = 135 bits (341), Expect = 4e-30
Identities = 64/83 (77%), Positives = 70/83 (84%)
Frame = +2
Query: 41 GVVSNLQRKQSLYQSLDERFEIQKEKYTGQQYSQIYFARLHNMRNILYSLVDKWKPHLPV 220
G + LQRKQ+ Y SLDE FEIQKE Y GQQYSQIYFARLH MR +LYSLV WKPHLP+
Sbjct: 5 GKEARLQRKQATYISLDEPFEIQKETYRGQQYSQIYFARLHLMRTLLYSLVPNWKPHLPI 64
Query: 221 CTVLGLEEGKECIIVGTLYKHMK 289
CTVL LEEG+ECII+GTLYKHMK
Sbjct: 65 CTVLELEEGRECIIIGTLYKHMK 87
>ref|XP_006411476.1| hypothetical protein EUTSA_v10016664mg [Eutrema salsugineum]
gi|557112645|gb|ESQ52929.1| hypothetical protein
EUTSA_v10016664mg [Eutrema salsugineum]
Length = 441
Score = 134 bits (337), Expect = 1e-29
Identities = 66/88 (75%), Positives = 69/88 (78%)
Frame = +2
Query: 26 EAMEAGVVSNLQRKQSLYQSLDERFEIQKEKYTGQQYSQIYFARLHNMRNILYSLVDKWK 205
E+ME QRKQS Y LDERFEIQKE Y GQQYSQIYFARLH MR +LYS WK
Sbjct: 2 ESMEIDSDKVQQRKQSNYSYLDERFEIQKEMYRGQQYSQIYFARLHLMRTLLYSFAPTWK 61
Query: 206 PHLPVCTVLGLEEGKECIIVGTLYKHMK 289
PHLPVC VLGLEEGKECIIVGTL+KHMK
Sbjct: 62 PHLPVCKVLGLEEGKECIIVGTLFKHMK 89
>ref|XP_006429877.1| hypothetical protein CICLE_v10012551mg [Citrus clementina]
gi|557531934|gb|ESR43117.1| hypothetical protein
CICLE_v10012551mg [Citrus clementina]
Length = 252
Score = 132 bits (332), Expect = 5e-29
Identities = 62/83 (74%), Positives = 69/83 (83%)
Frame = +2
Query: 41 GVVSNLQRKQSLYQSLDERFEIQKEKYTGQQYSQIYFARLHNMRNILYSLVDKWKPHLPV 220
G + LQRKQ+ Y LDE FEIQKE Y GQQYSQIYFARLH MR +LYSLV WKPHLP+
Sbjct: 5 GEEARLQRKQATYIFLDEPFEIQKETYRGQQYSQIYFARLHLMRALLYSLVPNWKPHLPI 64
Query: 221 CTVLGLEEGKECIIVGTLYKHMK 289
CTVL LEEG+EC+I+GTLYKHMK
Sbjct: 65 CTVLELEEGRECVIIGTLYKHMK 87
>ref|NP_973664.1| DNA polymerase delta subunit 2 [Arabidopsis thaliana]
gi|322510023|sp|O48520.2|DPOD2_ARATH RecName: Full=DNA
polymerase delta small subunit
gi|22531160|gb|AAM97084.1| putative DNA polymerase delta
small subunit [Arabidopsis thaliana]
gi|31376377|gb|AAP49515.1| At2g42120 [Arabidopsis
thaliana] gi|62320658|dbj|BAD95325.1| DNA polymerase
delta small subunit like protein [Arabidopsis thaliana]
gi|330254978|gb|AEC10072.1| DNA polymerase delta subunit
2 [Arabidopsis thaliana]
Length = 440
Score = 130 bits (327), Expect = 2e-28
Identities = 62/77 (80%), Positives = 66/77 (85%)
Frame = +2
Query: 59 QRKQSLYQSLDERFEIQKEKYTGQQYSQIYFARLHNMRNILYSLVDKWKPHLPVCTVLGL 238
+RKQS Y SLDERFEIQKE Y GQQYSQIYFARLH MR +LYSL WK HLPVC VLGL
Sbjct: 10 ERKQSDYNSLDERFEIQKEMYRGQQYSQIYFARLHLMRTLLYSLAPTWKSHLPVCKVLGL 69
Query: 239 EEGKECIIVGTLYKHMK 289
E+GKECIIVGTL+KHMK
Sbjct: 70 EKGKECIIVGTLFKHMK 86
>ref|XP_006294235.1| hypothetical protein CARUB_v10023232mg [Capsella rubella]
gi|482562943|gb|EOA27133.1| hypothetical protein
CARUB_v10023232mg [Capsella rubella]
Length = 439
Score = 130 bits (326), Expect = 2e-28
Identities = 61/77 (79%), Positives = 65/77 (84%)
Frame = +2
Query: 59 QRKQSLYQSLDERFEIQKEKYTGQQYSQIYFARLHNMRNILYSLVDKWKPHLPVCTVLGL 238
+RKQS Y LDERFEI KE Y GQQYSQIYFARLH MR +LYSL WKPHLPVC VLGL
Sbjct: 10 ERKQSEYNYLDERFEIHKEMYRGQQYSQIYFARLHLMRTLLYSLAPTWKPHLPVCKVLGL 69
Query: 239 EEGKECIIVGTLYKHMK 289
EEGK+CIIVGTL+KHMK
Sbjct: 70 EEGKDCIIVGTLFKHMK 86
>ref|XP_004136567.1| PREDICTED: DNA polymerase delta small subunit-like [Cucumis
sativus] gi|449526900|ref|XP_004170451.1| PREDICTED: DNA
polymerase delta small subunit-like [Cucumis sativus]
Length = 438
Score = 129 bits (323), Expect = 5e-28
Identities = 60/86 (69%), Positives = 70/86 (81%)
Frame = +2
Query: 32 MEAGVVSNLQRKQSLYQSLDERFEIQKEKYTGQQYSQIYFARLHNMRNILYSLVDKWKPH 211
ME ++N+ RKQ Y+ DE+++IQKE Y GQQYS IYFARLH MR IL+SLV WKPH
Sbjct: 1 MEIDSLTNVHRKQCTYELSDEQYKIQKETYKGQQYSHIYFARLHLMRTILHSLVSNWKPH 60
Query: 212 LPVCTVLGLEEGKECIIVGTLYKHMK 289
LPV TVLGLEEGKEC+IVGT+YKHMK
Sbjct: 61 LPVSTVLGLEEGKECVIVGTVYKHMK 86
>ref|XP_002530707.1| DNA polymerase delta small subunit, putative [Ricinus communis]
gi|223529721|gb|EEF31661.1| DNA polymerase delta small
subunit, putative [Ricinus communis]
Length = 425
Score = 129 bits (323), Expect = 5e-28
Identities = 63/86 (73%), Positives = 67/86 (77%)
Frame = +2
Query: 32 MEAGVVSNLQRKQSLYQSLDERFEIQKEKYTGQQYSQIYFARLHNMRNILYSLVDKWKPH 211
ME +L RKQ Y SLDE +EIQ E Y GQQYSQIYFARLH +R +LYSLV WK H
Sbjct: 1 MEIDNEKSLHRKQCTYASLDETYEIQNETYRGQQYSQIYFARLHMIRTLLYSLVPLWKSH 60
Query: 212 LPVCTVLGLEEGKECIIVGTLYKHMK 289
LPVCTVLGL EGKECIIVGTLYKHMK
Sbjct: 61 LPVCTVLGLVEGKECIIVGTLYKHMK 86
>ref|NP_001048841.1| Os03g0128500 [Oryza sativa Japonica Group]
gi|13431489|sp|Q9LRE5.1|DPOD2_ORYSJ RecName: Full=DNA
polymerase delta small subunit
gi|9188572|dbj|BAA99574.1| OsPol delta small subunit
[Oryza sativa Japonica Group]
gi|108705983|gb|ABF93778.1| DNA polymerase delta small
subunit, putative, expressed [Oryza sativa Japonica
Group] gi|113547312|dbj|BAF10755.1| Os03g0128500 [Oryza
sativa Japonica Group] gi|215695508|dbj|BAG90699.1|
unnamed protein product [Oryza sativa Japonica Group]
gi|222624129|gb|EEE58261.1| hypothetical protein
OsJ_09265 [Oryza sativa Japonica Group]
Length = 429
Score = 128 bits (321), Expect = 9e-28
Identities = 58/78 (74%), Positives = 68/78 (87%)
Frame = +2
Query: 56 LQRKQSLYQSLDERFEIQKEKYTGQQYSQIYFARLHNMRNILYSLVDKWKPHLPVCTVLG 235
++RKQ+ Y +LDER+ IQ EKY GQQYS IYF RLH+MRN+L++LV WKPHLPV TVLG
Sbjct: 1 MERKQAEYSNLDERYAIQGEKYQGQQYSHIYFTRLHHMRNLLHALVPSWKPHLPVTTVLG 60
Query: 236 LEEGKECIIVGTLYKHMK 289
LEEGK+CIIVGTLYKHMK
Sbjct: 61 LEEGKDCIIVGTLYKHMK 78
>dbj|BAA85393.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 445
Score = 128 bits (321), Expect = 9e-28
Identities = 58/78 (74%), Positives = 68/78 (87%)
Frame = +2
Query: 56 LQRKQSLYQSLDERFEIQKEKYTGQQYSQIYFARLHNMRNILYSLVDKWKPHLPVCTVLG 235
++RKQ+ Y +LDER+ IQ EKY GQQYS IYF RLH+MRN+L++LV WKPHLPV TVLG
Sbjct: 1 MERKQAEYSNLDERYAIQGEKYQGQQYSHIYFTRLHHMRNLLHALVPSWKPHLPVTTVLG 60
Query: 236 LEEGKECIIVGTLYKHMK 289
LEEGK+CIIVGTLYKHMK
Sbjct: 61 LEEGKDCIIVGTLYKHMK 78