BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium22_contig00050822
         (508 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN67401.1| hypothetical protein VITISV_025967 [Vitis vinifera]   108   6e-22
emb|CBI22375.3| unnamed protein product [Vitis vinifera]              107   1e-21
ref|XP_002266822.1| PREDICTED: pentatricopeptide repeat-containi...   107   1e-21
ref|XP_002521980.1| pentatricopeptide repeat-containing protein,...   100   2e-19
ref|XP_007030407.1| Pentatricopeptide repeat (PPR-like) superfam...    99   8e-19
ref|XP_004304772.1| PREDICTED: pentatricopeptide repeat-containi...    84   2e-14
ref|XP_006371094.1| hypothetical protein POPTR_0019s03630g [Popu...    82   6e-14
ref|XP_004142590.1| PREDICTED: pentatricopeptide repeat-containi...    75   9e-12
gb|EXB93167.1| hypothetical protein L484_024505 [Morus notabilis]      74   2e-11
ref|XP_003590960.1| Pentatricopeptide repeat-containing protein ...    73   5e-11
ref|XP_006589209.1| PREDICTED: pentatricopeptide repeat-containi...    72   1e-10
ref|XP_006487702.1| PREDICTED: pentatricopeptide repeat-containi...    72   1e-10
ref|XP_006442665.1| hypothetical protein CICLE_v10019446mg [Citr...    71   2e-10
ref|XP_003521773.1| PREDICTED: pentatricopeptide repeat-containi...    69   7e-10
ref|XP_002884468.1| pentatricopeptide repeat-containing protein ...    67   3e-09
ref|XP_003555568.1| PREDICTED: pentatricopeptide repeat-containi...    67   3e-09
dbj|BAD95034.1| hypothetical protein [Arabidopsis thaliana]            66   4e-09
ref|NP_566237.1| pentatricopeptide repeat-containing protein [Ar...    66   4e-09
ref|XP_006857320.1| hypothetical protein AMTR_s00067p00076830 [A...    66   6e-09
ref|XP_006296608.1| hypothetical protein CARUB_v10013258mg [Caps...    62   8e-08

>emb|CAN67401.1| hypothetical protein VITISV_025967 [Vitis vinifera]
          Length = 592

 Score =  108 bits (271), Expect = 6e-22
 Identities = 58/111 (52%), Positives = 71/111 (63%), Gaps = 2/111 (1%)
 Frame = +3

Query: 180 MAIFSTDFFSHSIPFNTTI--TKPSHQNLIINSLXXXXXXXXXXXXXXKLKISAETRPAD 353
           M I+STDFF H  PF+  +  T  SH   I+                 K+ +SAE RPA 
Sbjct: 11  MTIYSTDFFPHCPPFSPQLKPTSHSHHTSIVTCRNPNPNDGYNSRNSPKVGVSAEARPAH 70

Query: 354 FQSLDFKDTHLLKLFHRSFKAGKLDESLYFLELLINKGCYTPDVVLCTKLI 506
            QS DF++THL+KL +RS KAGK +ESLYFLE L+NKG YTPDV+LCTKLI
Sbjct: 71  LQSYDFRETHLMKLLNRSCKAGKFNESLYFLECLVNKG-YTPDVILCTKLI 120


>emb|CBI22375.3| unnamed protein product [Vitis vinifera]
          Length = 407

 Score =  107 bits (268), Expect = 1e-21
 Identities = 58/111 (52%), Positives = 70/111 (63%), Gaps = 2/111 (1%)
 Frame = +3

Query: 180 MAIFSTDFFSHSIPFNTTI--TKPSHQNLIINSLXXXXXXXXXXXXXXKLKISAETRPAD 353
           M I+STDFF    PFN  +  T  SH   I+                 K+ +SAE RPA 
Sbjct: 1   MTIYSTDFFPRCPPFNPQLKPTSHSHHTSIVTCRNPNPNDGFNSRNAPKVGVSAEARPAH 60

Query: 354 FQSLDFKDTHLLKLFHRSFKAGKLDESLYFLELLINKGCYTPDVVLCTKLI 506
            QS DF++THL+KL +RS KAGK +ESLYFLE L+NKG YTPDV+LCTKLI
Sbjct: 61  LQSYDFRETHLMKLLNRSCKAGKFNESLYFLECLVNKG-YTPDVILCTKLI 110


>ref|XP_002266822.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
           chloroplastic-like [Vitis vinifera]
          Length = 582

 Score =  107 bits (268), Expect = 1e-21
 Identities = 58/111 (52%), Positives = 70/111 (63%), Gaps = 2/111 (1%)
 Frame = +3

Query: 180 MAIFSTDFFSHSIPFNTTI--TKPSHQNLIINSLXXXXXXXXXXXXXXKLKISAETRPAD 353
           M I+STDFF    PFN  +  T  SH   I+                 K+ +SAE RPA 
Sbjct: 1   MTIYSTDFFPRCPPFNPQLKPTSHSHHTSIVTCRNPNPNDGFNSRNAPKVGVSAEARPAH 60

Query: 354 FQSLDFKDTHLLKLFHRSFKAGKLDESLYFLELLINKGCYTPDVVLCTKLI 506
            QS DF++THL+KL +RS KAGK +ESLYFLE L+NKG YTPDV+LCTKLI
Sbjct: 61  LQSYDFRETHLMKLLNRSCKAGKFNESLYFLECLVNKG-YTPDVILCTKLI 110


>ref|XP_002521980.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223538784|gb|EEF40384.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 584

 Score =  100 bits (250), Expect = 2e-19
 Identities = 53/112 (47%), Positives = 72/112 (64%), Gaps = 3/112 (2%)
 Frame = +3

Query: 180 MAIFSTDFFSHSIPFNTTITKPSHQNL---IINSLXXXXXXXXXXXXXXKLKISAETRPA 350
           M +FST+F  HSI F T   KP+  +L   I++ +              K+++SAETR  
Sbjct: 1   MTLFSTEFLPHSISFTTQPLKPTSNSLHSTIVSCIRPELNDANKVRNPQKVRVSAETRQT 60

Query: 351 DFQSLDFKDTHLLKLFHRSFKAGKLDESLYFLELLINKGCYTPDVVLCTKLI 506
              S DFK+ HL+KL +RS +AGK +ESLYFLE +++KG YTPDV+LCTKLI
Sbjct: 61  HVLSFDFKEVHLMKLLNRSCRAGKYNESLYFLECMVDKG-YTPDVILCTKLI 111


>ref|XP_007030407.1| Pentatricopeptide repeat (PPR-like) superfamily protein [Theobroma
           cacao] gi|508719012|gb|EOY10909.1| Pentatricopeptide
           repeat (PPR-like) superfamily protein [Theobroma cacao]
          Length = 586

 Score = 98.6 bits (244), Expect = 8e-19
 Identities = 53/115 (46%), Positives = 71/115 (61%), Gaps = 6/115 (5%)
 Frame = +3

Query: 180 MAIFSTDFFSHSIPFNTTITKP-----SHQNLIINSLXXXXXXXXXXXXXX-KLKISAET 341
           M +FST+  +HS+PF T   KP     SH   +++ L               K+++SAET
Sbjct: 1   MTLFSTELVTHSLPFTTQQLKPTSNSHSHHTSLVSCLNHESQDSSSKSRNNQKVRVSAET 60

Query: 342 RPADFQSLDFKDTHLLKLFHRSFKAGKLDESLYFLELLINKGCYTPDVVLCTKLI 506
           RP    S DFK+THL+KL +RS KAGK +E+ YFLE ++ KG Y PDVVLCTK+I
Sbjct: 61  RPTHLLSFDFKETHLMKLLNRSCKAGKYNEAFYFLECMVGKG-YKPDVVLCTKMI 114


>ref|XP_004304772.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
           chloroplastic-like [Fragaria vesca subsp. vesca]
          Length = 586

 Score = 84.3 bits (207), Expect = 2e-14
 Identities = 46/115 (40%), Positives = 66/115 (57%), Gaps = 6/115 (5%)
 Frame = +3

Query: 180 MAIFSTDFFSHSIPFNTTITKPSHQN------LIINSLXXXXXXXXXXXXXXKLKISAET 341
           MAI ST+   HS    + +   SH +         +S               ++ +SAE 
Sbjct: 1   MAIVSTELLPHSFHTTSQLKPTSHSHHPTALSCRASSASSISNGRNSSRNPTRVSVSAEP 60

Query: 342 RPADFQSLDFKDTHLLKLFHRSFKAGKLDESLYFLELLINKGCYTPDVVLCTKLI 506
           +    Q+ DFKDTHL+K+ +RS KAG+ +E++YFLEL++NKG Y PDV+LCTKLI
Sbjct: 61  KSTQLQNYDFKDTHLMKVLNRSCKAGQYNEAIYFLELMVNKG-YKPDVILCTKLI 114


>ref|XP_006371094.1| hypothetical protein POPTR_0019s03630g [Populus trichocarpa]
           gi|550316702|gb|ERP48891.1| hypothetical protein
           POPTR_0019s03630g [Populus trichocarpa]
          Length = 586

 Score = 82.4 bits (202), Expect = 6e-14
 Identities = 52/119 (43%), Positives = 67/119 (56%), Gaps = 10/119 (8%)
 Frame = +3

Query: 180 MAIFSTDFFSHSIPFNTTITKPSHQNLIINSLXXXXXXXXXXXXXX---------KLK-I 329
           M +FST+F SHS  F  T     H  L ++SL                       KL+ +
Sbjct: 1   MTMFSTEFISHSCSFPFT---SKHFKLSLHSLQSNVVSCINPTHNDTNSNLGNPPKLRRV 57

Query: 330 SAETRPADFQSLDFKDTHLLKLFHRSFKAGKLDESLYFLELLINKGCYTPDVVLCTKLI 506
             ET+P    S DFK+THL+KL +RS KAGK +ESLYFLE ++ KG Y PDV++CTKLI
Sbjct: 58  LPETKPTHVLSYDFKETHLMKLLNRSCKAGKCNESLYFLECMVAKG-YQPDVIMCTKLI 115


>ref|XP_004142590.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
           chloroplastic-like [Cucumis sativus]
          Length = 581

 Score = 75.1 bits (183), Expect = 9e-12
 Identities = 44/107 (41%), Positives = 63/107 (58%)
 Frame = +3

Query: 186 IFSTDFFSHSIPFNTTITKPSHQNLIINSLXXXXXXXXXXXXXXKLKISAETRPADFQSL 365
           +FS++F   S+ F   + KP+      +S+               +  SAE R   F +L
Sbjct: 1   MFSSEFLPQSLHFTNPLAKPTIPQSRSDSIPACRFSNKTHLR--NVTSSAEFRQPHFPNL 58

Query: 366 DFKDTHLLKLFHRSFKAGKLDESLYFLELLINKGCYTPDVVLCTKLI 506
           D +D HL+KL +RS +AGK +ESLYFLE +++KG + PDVVLCTKLI
Sbjct: 59  DNRDAHLMKLLNRSCRAGKHNESLYFLESVVSKG-FKPDVVLCTKLI 104


>gb|EXB93167.1| hypothetical protein L484_024505 [Morus notabilis]
          Length = 587

 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 44/116 (37%), Positives = 70/116 (60%), Gaps = 7/116 (6%)
 Frame = +3

Query: 180 MAIFSTDFFSHSIPFNTT----ITKPSHQNLIIN--SLXXXXXXXXXXXXXXKLKISAET 341
           MAI ST+F   ++PF+       ++ SH  L     S               ++++S ET
Sbjct: 1   MAIISTEFLPQTLPFSPQPKQHTSRQSHTCLSCRNPSQSSTDIYRKKNKKPLRVRVSVET 60

Query: 342 RPADFQS-LDFKDTHLLKLFHRSFKAGKLDESLYFLELLINKGCYTPDVVLCTKLI 506
           +  + QS  DF ++HLLK+ +RS K+GK +E+LYFLEL+++KG + PDV+LCTK++
Sbjct: 61  KSPNSQSNSDFSESHLLKVINRSCKSGKYNEALYFLELMVSKG-FKPDVILCTKVM 115


>ref|XP_003590960.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355480008|gb|AES61211.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 590

 Score = 72.8 bits (177), Expect = 5e-11
 Identities = 45/121 (37%), Positives = 65/121 (53%), Gaps = 12/121 (9%)
 Frame = +3

Query: 180 MAIFSTDFFSHSIPFNTTITKPSHQNLII-----------NSLXXXXXXXXXXXXXXKLK 326
           M  FST+F SH++ F    +  S  N II           N+               + +
Sbjct: 1   MTTFSTEFLSHTLNFRIHTSSHSKPNTIIITSSILFLNEANNNNNKRRRRTNNNEQQQFR 60

Query: 327 ISAETRPADF-QSLDFKDTHLLKLFHRSFKAGKLDESLYFLELLINKGCYTPDVVLCTKL 503
           ++ ET+P    Q  DF+DT+ +K  +RS K+ K DESLYFL+ ++N+G Y PDV+LCTKL
Sbjct: 61  VN-ETKPTKHDQDYDFRDTNFMKTLNRSCKSAKYDESLYFLQHMVNRG-YKPDVILCTKL 118

Query: 504 I 506
           I
Sbjct: 119 I 119


>ref|XP_006589209.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
           chloroplastic-like [Glycine max]
          Length = 561

 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 44/109 (40%), Positives = 61/109 (55%)
 Frame = +3

Query: 180 MAIFSTDFFSHSIPFNTTITKPSHQNLIINSLXXXXXXXXXXXXXXKLKISAETRPADFQ 359
           M   ST+F SH++PF T +    H N   N++              K+  S++TRP   Q
Sbjct: 1   MTTVSTEFLSHTLPFQTNLKHAWHPNPT-NTVITCSNRRLNNKGHTKVT-SSDTRP--HQ 56

Query: 360 SLDFKDTHLLKLFHRSFKAGKLDESLYFLELLINKGCYTPDVVLCTKLI 506
             DF+DT+ +K  +R  K GK  E+LYFLE ++  G Y PDV+LCTKLI
Sbjct: 57  HYDFRDTNHIKSLNRLCKTGKCTEALYFLEQMVMNG-YKPDVILCTKLI 104


>ref|XP_006487702.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
           chloroplastic-like [Citrus sinensis]
          Length = 583

 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 47/113 (41%), Positives = 62/113 (54%), Gaps = 6/113 (5%)
 Frame = +3

Query: 186 IFSTDFFSHSIPFNTTITKPSHQNL---IINSLXXXXXXXXXXXXXXKLKIS--AETRP- 347
           I STDF    +P N  I    HQ L     +S+              ++++S  AETRP 
Sbjct: 4   ISSTDF----VPRNLVIFTSQHQQLKPTTSHSVQSTVVSCINPKSNERVRVSSSAETRPN 59

Query: 348 ADFQSLDFKDTHLLKLFHRSFKAGKLDESLYFLELLINKGCYTPDVVLCTKLI 506
               S D K+T  +KL  +SF+AGK DESLYF+E ++  GC  PDVV+CTKLI
Sbjct: 60  THLLSFDVKETQFMKLIKKSFRAGKFDESLYFIESMVANGC-KPDVVMCTKLI 111


>ref|XP_006442665.1| hypothetical protein CICLE_v10019446mg [Citrus clementina]
           gi|557544927|gb|ESR55905.1| hypothetical protein
           CICLE_v10019446mg [Citrus clementina]
          Length = 583

 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 47/113 (41%), Positives = 61/113 (53%), Gaps = 6/113 (5%)
 Frame = +3

Query: 186 IFSTDFFSHSIPFNTTITKPSHQN---LIINSLXXXXXXXXXXXXXXKLKIS--AETRP- 347
           I STDF    +P N  I    HQ       +S+              ++++S  AETRP 
Sbjct: 4   ISSTDF----VPRNLVIFTSQHQQQKPTTSHSVQSTVVSCINPKSNERVRVSSSAETRPN 59

Query: 348 ADFQSLDFKDTHLLKLFHRSFKAGKLDESLYFLELLINKGCYTPDVVLCTKLI 506
               S D K+T  +KL  RSF+AGK DESLYF+E ++  GC  PDVV+CTKLI
Sbjct: 60  THLLSFDVKETQFMKLIKRSFRAGKFDESLYFIESMVANGC-KPDVVMCTKLI 111


>ref|XP_003521773.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
           chloroplastic-like [Glycine max]
          Length = 570

 Score = 68.9 bits (167), Expect = 7e-10
 Identities = 37/60 (61%), Positives = 45/60 (75%)
 Frame = +3

Query: 327 ISAETRPADFQSLDFKDTHLLKLFHRSFKAGKLDESLYFLELLINKGCYTPDVVLCTKLI 506
           +S+ ++P    +LDFKDTHLLK   RS KAG  +ESLYFL  L+NKG + PDVVLCTKLI
Sbjct: 42  LSSVSKPQT-HTLDFKDTHLLKSLSRSCKAGNFNESLYFLRHLVNKG-HKPDVVLCTKLI 99


>ref|XP_002884468.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297330308|gb|EFH60727.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 598

 Score = 67.0 bits (162), Expect = 3e-09
 Identities = 33/60 (55%), Positives = 42/60 (70%)
 Frame = +3

Query: 327 ISAETRPADFQSLDFKDTHLLKLFHRSFKAGKLDESLYFLELLINKGCYTPDVVLCTKLI 506
           I  E R    QSL F+DT +LK+FHRS ++G   ESL+ LE ++ KG Y PDV+LCTKLI
Sbjct: 69  IPTERRQQHSQSLGFRDTQMLKIFHRSCRSGNYIESLHLLETMVRKG-YNPDVILCTKLI 127


>ref|XP_003555568.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
           chloroplastic-like [Glycine max]
          Length = 576

 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 43/121 (35%), Positives = 59/121 (48%), Gaps = 12/121 (9%)
 Frame = +3

Query: 180 MAIFSTDFFSHSIPFNTTITK---PSHQNLIINSLXXXXXXXXXXXXXXKLK-------- 326
           MA  S++F SH +P  T   +   P+  N +I                            
Sbjct: 1   MATVSSEFLSHCLPLGTNSKRAWLPNPSNTVITCRIPLLNEDNPSKRRLNNNNNNKGHTR 60

Query: 327 -ISAETRPADFQSLDFKDTHLLKLFHRSFKAGKLDESLYFLELLINKGCYTPDVVLCTKL 503
             S++TRP   Q  DF+DTH +K  +R  K GK  E+LYFLE ++ +G Y PDV+LCTKL
Sbjct: 61  VTSSDTRPQQ-QHYDFRDTHHMKALNRLCKTGKYTEALYFLEQMVKRG-YKPDVILCTKL 118

Query: 504 I 506
           I
Sbjct: 119 I 119


>dbj|BAD95034.1| hypothetical protein [Arabidopsis thaliana]
          Length = 602

 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 32/60 (53%), Positives = 42/60 (70%)
 Frame = +3

Query: 327 ISAETRPADFQSLDFKDTHLLKLFHRSFKAGKLDESLYFLELLINKGCYTPDVVLCTKLI 506
           +  E R    QSL F+DT +LK+FHRS ++G   ESL+ LE ++ KG Y PDV+LCTKLI
Sbjct: 73  LPTERRQQHSQSLGFRDTQMLKIFHRSCRSGNYIESLHLLETMVRKG-YNPDVILCTKLI 131


>ref|NP_566237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75207286|sp|Q9SR00.1|PP213_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At3g04760, chloroplastic; Flags: Precursor
           gi|6175176|gb|AAF04902.1|AC011437_17 hypothetical
           protein [Arabidopsis thaliana]
           gi|15810359|gb|AAL07067.1| unknown protein [Arabidopsis
           thaliana] gi|22136960|gb|AAM91709.1| unknown protein
           [Arabidopsis thaliana] gi|332640611|gb|AEE74132.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 602

 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 32/60 (53%), Positives = 42/60 (70%)
 Frame = +3

Query: 327 ISAETRPADFQSLDFKDTHLLKLFHRSFKAGKLDESLYFLELLINKGCYTPDVVLCTKLI 506
           +  E R    QSL F+DT +LK+FHRS ++G   ESL+ LE ++ KG Y PDV+LCTKLI
Sbjct: 73  LPTERRQQHSQSLGFRDTQMLKIFHRSCRSGNYIESLHLLETMVRKG-YNPDVILCTKLI 131


>ref|XP_006857320.1| hypothetical protein AMTR_s00067p00076830 [Amborella trichopoda]
           gi|548861413|gb|ERN18787.1| hypothetical protein
           AMTR_s00067p00076830 [Amborella trichopoda]
          Length = 602

 Score = 65.9 bits (159), Expect = 6e-09
 Identities = 31/55 (56%), Positives = 41/55 (74%)
 Frame = +3

Query: 342 RPADFQSLDFKDTHLLKLFHRSFKAGKLDESLYFLELLINKGCYTPDVVLCTKLI 506
           R     S DF +TH +KL +RS K+GKL E+LYFL+ ++NKG + PDV+LCTKLI
Sbjct: 54  RSNQLNSSDFNETHYIKLLNRSCKSGKLSETLYFLDYMVNKG-HHPDVILCTKLI 107


>ref|XP_006296608.1| hypothetical protein CARUB_v10013258mg [Capsella rubella]
           gi|482565317|gb|EOA29506.1| hypothetical protein
           CARUB_v10013258mg [Capsella rubella]
          Length = 607

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 29/49 (59%), Positives = 38/49 (77%)
 Frame = +3

Query: 360 SLDFKDTHLLKLFHRSFKAGKLDESLYFLELLINKGCYTPDVVLCTKLI 506
           SL F+DT +LK+FHRS ++G   ESL+ LE ++ KG Y PDV+LCTKLI
Sbjct: 88  SLGFRDTQMLKIFHRSCRSGNYIESLHLLESMVRKG-YNPDVILCTKLI 135