BLASTX nr result

ID: Sinomenium22_contig00050591 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium22_contig00050591
         (372 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_007220909.1| hypothetical protein PRUPE_ppa000710mg [Prun...    61   2e-07
ref|XP_006844661.1| hypothetical protein AMTR_s00016p00239570 [A...    60   3e-07
ref|XP_007200391.1| hypothetical protein PRUPE_ppa012540mg [Prun...    58   1e-06
sp|Q8H252.1|RBR_COCNU RecName: Full=Retinoblastoma-related prote...    57   3e-06

>ref|XP_007220909.1| hypothetical protein PRUPE_ppa000710mg [Prunus persica]
           gi|462417371|gb|EMJ22108.1| hypothetical protein
           PRUPE_ppa000710mg [Prunus persica]
          Length = 1026

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 29/60 (48%), Positives = 43/60 (71%), Gaps = 4/60 (6%)
 Frame = +2

Query: 179 MEDVHPTISTTTSQY----DVGTIEARFLELCKSGVSLDENLFTQAMNVYKESKNILLSN 346
           MED +P +S + S      D   + ARF +LCK+G+SLDEN +TQAM ++KE+K++L+SN
Sbjct: 9   MEDTNPEVSASNSSNSESRDSDPVGARFTDLCKNGLSLDENPYTQAMKLFKETKHLLISN 68


>ref|XP_006844661.1| hypothetical protein AMTR_s00016p00239570 [Amborella trichopoda]
           gi|548847132|gb|ERN06336.1| hypothetical protein
           AMTR_s00016p00239570 [Amborella trichopoda]
          Length = 1021

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 29/60 (48%), Positives = 42/60 (70%)
 Frame = +2

Query: 179 MEDVHPTISTTTSQYDVGTIEARFLELCKSGVSLDENLFTQAMNVYKESKNILLSNMCLL 358
           ME++ P   ++    D G +EAR LE CK G+ LDEN  TQAM++++ESK++LL+NM  L
Sbjct: 6   MEEIKPLTLSSNLISDGGGMEARLLEFCKMGLLLDENTTTQAMSLFRESKHLLLANMSAL 65


>ref|XP_007200391.1| hypothetical protein PRUPE_ppa012540mg [Prunus persica]
           gi|462395791|gb|EMJ01590.1| hypothetical protein
           PRUPE_ppa012540mg [Prunus persica]
          Length = 165

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 27/60 (45%), Positives = 43/60 (71%), Gaps = 4/60 (6%)
 Frame = +2

Query: 179 MEDVHPTI----STTTSQYDVGTIEARFLELCKSGVSLDENLFTQAMNVYKESKNILLSN 346
           MED +P +    ++ +   D   I+ARF +LCK+G+SLD+N +TQAM ++KE+K++L SN
Sbjct: 9   MEDTNPKVLASKNSNSESRDSDPIQARFNDLCKNGLSLDDNAYTQAMKLFKETKHLLTSN 68


>sp|Q8H252.1|RBR_COCNU RecName: Full=Retinoblastoma-related protein
           gi|23429044|gb|AAM77469.1| retinoblastoma-like protein
           [Cocos nucifera]
          Length = 1011

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 29/57 (50%), Positives = 42/57 (73%)
 Frame = +2

Query: 179 MEDVHPTISTTTSQYDVGTIEARFLELCKSGVSLDENLFTQAMNVYKESKNILLSNM 349
           MEDV P+IS  +   D G +EAR  ++CKS ++LDE+   QAM +++ESK+ILL+NM
Sbjct: 8   MEDVKPSISLPSD--DGGAMEARLTDVCKSKLALDESTMRQAMILFRESKHILLANM 62


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