BLASTX nr result
ID: Sinomenium22_contig00050563
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium22_contig00050563
(596 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004514187.1| PREDICTED: uncharacterized protein LOC101501... 88 2e-15
ref|XP_004513130.1| PREDICTED: uncharacterized protein LOC101488... 84 4e-14
ref|XP_007153750.1| hypothetical protein PHAVU_003G062000g [Phas... 79 1e-12
pir||T02087 gag/pol polyprotein - maize retrotransposon Hopscotc... 72 2e-10
gb|AAB82754.1| retrofit [Oryza longistaminata] 70 6e-10
gb|ACY72569.1| unknown [Oryza sativa Japonica Group] 69 1e-09
dbj|BAB90546.1| putative rice retrotransposon retrofit gag/pol p... 67 3e-09
ref|XP_004980848.1| PREDICTED: uncharacterized protein LOC101755... 67 4e-09
gb|AAK02020.2|AC074283_1 Putative gag-pol polyprotein [Oryza sat... 67 4e-09
emb|CAN78447.1| hypothetical protein VITISV_026810 [Vitis vinifera] 67 4e-09
emb|CAH67225.1| OSIGBa0145M07.7 [Oryza sativa Indica Group] 66 6e-09
emb|CAE05450.3| OSJNBa0073E02.10 [Oryza sativa Japonica Group] 66 6e-09
gb|ACV42639.1| gag/pol [Oryza sativa Japonica Group] 66 8e-09
gb|AAP94600.1| putative copia-like retrotransposon Hopscotch pol... 66 8e-09
gb|AAL66754.1|AF464738_5 putative copia-like retrotransposon Hop... 66 8e-09
ref|XP_006376191.1| hypothetical protein POPTR_0013s10690g [Popu... 65 1e-08
emb|CAN67546.1| hypothetical protein VITISV_027734 [Vitis vinifera] 65 1e-08
gb|EAZ20340.1| hypothetical protein OsJ_35949 [Oryza sativa Japo... 65 1e-08
gb|AAT47103.1| hypothetical protein [Oryza sativa Japonica Group] 65 1e-08
emb|CAN77295.1| hypothetical protein VITISV_005638 [Vitis vinifera] 64 2e-08
>ref|XP_004514187.1| PREDICTED: uncharacterized protein LOC101501674 [Cicer arietinum]
Length = 933
Score = 87.8 bits (216), Expect = 2e-15
Identities = 41/103 (39%), Positives = 63/103 (61%)
Frame = -2
Query: 490 HIRARIQICRTGIQTTRKGSRSMVQYLATLKEFVDSLAAAGSPFLDADLISYTLAGLDTD 311
H R+R+ ++ RKG M +YL +K D L AGSP ++DLI TL GLD++
Sbjct: 116 HTRSRVTDLKSEFHNIRKGEMKMEEYLVKMKNLADKLKLAGSPISNSDLIIQTLNGLDSE 175
Query: 310 YLPITTHLQEKTNLTWPDMHASLINYESHLQQLTALSMLSITS 182
Y P+ L ++T+LTW D+ A L+ +ES L QL +L+ L++ +
Sbjct: 176 YNPMVVKLSDQTSLTWVDLQAQLLTFESRLDQLNSLTNLTLNA 218
>ref|XP_004513130.1| PREDICTED: uncharacterized protein LOC101488260 [Cicer arietinum]
Length = 752
Score = 83.6 bits (205), Expect = 4e-14
Identities = 41/103 (39%), Positives = 58/103 (56%)
Frame = -2
Query: 490 HIRARIQICRTGIQTTRKGSRSMVQYLATLKEFVDSLAAAGSPFLDADLISYTLAGLDTD 311
H ++R ++ TRKG M QYL +K D L AGSP +DLI TL GLD D
Sbjct: 168 HTKSRTIYLKSEFHNTRKGQMKMDQYLLKMKNLSDKLKLAGSPISSSDLIIQTLNGLDAD 227
Query: 310 YLPITTHLQEKTNLTWPDMHASLINYESHLQQLTALSMLSITS 182
Y P+ L ++ NL W D+ A L+ +E+ ++QL S LS+ +
Sbjct: 228 YNPVVVKLSDQINLNWVDLQAQLLAFENRMEQLNNFSNLSMNA 270
>ref|XP_007153750.1| hypothetical protein PHAVU_003G062000g [Phaseolus vulgaris]
gi|561027104|gb|ESW25744.1| hypothetical protein
PHAVU_003G062000g [Phaseolus vulgaris]
Length = 207
Score = 78.6 bits (192), Expect = 1e-12
Identities = 38/90 (42%), Positives = 53/90 (58%)
Frame = -2
Query: 490 HIRARIQICRTGIQTTRKGSRSMVQYLATLKEFVDSLAAAGSPFLDADLISYTLAGLDTD 311
H R+RI + + RKG M +YL +K VD L AGSP ++DLI TL GLD+
Sbjct: 116 HTRSRITYLKYEFHSIRKGEMKMEEYLVKMKNLVDRLKLAGSPISNSDLIIQTLKGLDSK 175
Query: 310 YLPITTHLQEKTNLTWPDMHASLINYESHL 221
Y P+ L ++T+LTW D+ A L+ +E L
Sbjct: 176 YNPVVVKLSDQTSLTWVDLQAQLLTFEVDL 205
>pir||T02087 gag/pol polyprotein - maize retrotransposon Hopscotch
gi|531389|gb|AAA57005.1| copia-like retrotransposon
Hopscotch polyprotein [Zea mays]
Length = 1439
Score = 71.6 bits (174), Expect = 2e-10
Identities = 37/104 (35%), Positives = 61/104 (58%), Gaps = 1/104 (0%)
Frame = -2
Query: 490 HIRARIQICRTGIQTTRKGSRSMVQYLATLKEFVDSLAAAGSPFLDADLISYTLAGLDTD 311
H RAR R + TT+KG+ S+ +Y A ++ F D L AAG P D + +S+ L GLD D
Sbjct: 121 HSRARKVNTRIALATTKKGASSVAEYFAKMRGFADELGAAGKPLDDEEFVSFLLTGLDED 180
Query: 310 YLPITTHLQEKTN-LTWPDMHASLINYESHLQQLTALSMLSITS 182
+ P+ T + +++ +T D++ L++YE+ + T S L +S
Sbjct: 181 FNPLVTAVVARSDPITPGDLYTQLLSYENRMHLQTGSSSLMQSS 224
>gb|AAB82754.1| retrofit [Oryza longistaminata]
Length = 1445
Score = 69.7 bits (169), Expect = 6e-10
Identities = 38/123 (30%), Positives = 71/123 (57%), Gaps = 1/123 (0%)
Frame = -2
Query: 586 LLMRVSPCASTTWTNRMSEISFSTGSRRISLLHIRARIQICRTGIQTTRKGSRSMVQYLA 407
+L++V+ C + R E +STG+R AR R + T+KG+ + +Y+A
Sbjct: 99 VLIQVATCKTAAEAWRSIEALYSTGTR--------ARAVNTRLALTNTKKGTMKIAEYVA 150
Query: 406 TLKEFVDSLAAAGSPFLDADLISYTLAGLDTDYLPITTHLQEKTN-LTWPDMHASLINYE 230
++ D +AA G P + DL+ Y +AGL+ D+ PI ++L K++ +T ++++ L+N+E
Sbjct: 151 KMRALGDEMAAGGHPLDEEDLVQYIIAGLNEDFSPIVSNLCNKSDPITVGELYSQLVNFE 210
Query: 229 SHL 221
+ L
Sbjct: 211 TLL 213
>gb|ACY72569.1| unknown [Oryza sativa Japonica Group]
Length = 1436
Score = 68.6 bits (166), Expect = 1e-09
Identities = 38/123 (30%), Positives = 71/123 (57%), Gaps = 1/123 (0%)
Frame = -2
Query: 586 LLMRVSPCASTTWTNRMSEISFSTGSRRISLLHIRARIQICRTGIQTTRKGSRSMVQYLA 407
+L++V+ C + R E +STG+R AR R + T+KG+ + +Y+A
Sbjct: 98 VLIQVATCKTAAEAWRAIEGLYSTGTR--------ARAVNTRLALTNTKKGTMKIAEYVA 149
Query: 406 TLKEFVDSLAAAGSPFLDADLISYTLAGLDTDYLPITTHLQEKTN-LTWPDMHASLINYE 230
++ D +AA G P + DL+ Y +AGL+ D+ PI ++L K++ +T ++++ L+N+E
Sbjct: 150 KMRALGDEMAAGGRPLDEEDLVQYIIAGLNEDFSPIVSNLCNKSDPITVGELYSQLVNFE 209
Query: 229 SHL 221
+ L
Sbjct: 210 TLL 212
>dbj|BAB90546.1| putative rice retrotransposon retrofit gag/pol polyprotein [Oryza
sativa Japonica Group]
Length = 1448
Score = 67.4 bits (163), Expect = 3e-09
Identities = 37/123 (30%), Positives = 70/123 (56%), Gaps = 1/123 (0%)
Frame = -2
Query: 586 LLMRVSPCASTTWTNRMSEISFSTGSRRISLLHIRARIQICRTGIQTTRKGSRSMVQYLA 407
+L++V+ C + R E +STG+R AR R + T+KG+ + +Y+A
Sbjct: 99 VLIQVATCKTAAEAWRNIEALYSTGTR--------ARAVNTRLALTNTKKGTMKIAEYVA 150
Query: 406 TLKEFVDSLAAAGSPFLDADLISYTLAGLDTDYLPITTHLQEKTN-LTWPDMHASLINYE 230
++ D +AA G P + L+ Y +AGL+ D+ PI ++L K++ +T ++++ L+N+E
Sbjct: 151 KMRALCDEMAAGGRPLDEEGLVQYIIAGLNEDFSPIVSNLCNKSDPITVGELYSQLVNFE 210
Query: 229 SHL 221
+ L
Sbjct: 211 TLL 213
>ref|XP_004980848.1| PREDICTED: uncharacterized protein LOC101755795 [Setaria italica]
Length = 450
Score = 67.0 bits (162), Expect = 4e-09
Identities = 42/129 (32%), Positives = 70/129 (54%), Gaps = 1/129 (0%)
Frame = -2
Query: 595 SILLLMRVSPCASTTWTNRMSEISFSTGSRRISLLHIRARIQICRTGIQTTRKGSRSMVQ 416
S+L + S A+ W R+ E FS+ S+ AR R + +T+KGS + +
Sbjct: 79 SVLTQVNASETAAEAW--RIIEGVFSSQSQ--------ARAVNVRMALSSTKKGSMTATE 128
Query: 415 YLATLKEFVDSLAAAGSPFLDADLISYTLAGLDTDYLPITTHLQEKTN-LTWPDMHASLI 239
Y +K + D +AAAG D +L+ Y LAGLD D+ P+ + L KT ++ ++ + L+
Sbjct: 129 YCNKMKNYGDDMAAAGRRLKDDELVEYILAGLDEDFSPLVSSLITKTEPVSLEELFSQLL 188
Query: 238 NYESHLQQL 212
+E+HL+ L
Sbjct: 189 AFETHLELL 197
>gb|AAK02020.2|AC074283_1 Putative gag-pol polyprotein [Oryza sativa]
gi|31430072|gb|AAP52036.1| retrotransposon protein,
putative, Ty1-copia subclass [Oryza sativa Japonica
Group]
Length = 1058
Score = 67.0 bits (162), Expect = 4e-09
Identities = 33/92 (35%), Positives = 57/92 (61%), Gaps = 1/92 (1%)
Frame = -2
Query: 484 RARIQICRTGIQTTRKGSRSMVQYLATLKEFVDSLAAAGSPFLDADLISYTLAGLDTDYL 305
RAR+ R + T+KG+RS+ +Y+ +K D +A+AG D +L+SY LAGLD DY
Sbjct: 86 RARVINTRLALSNTKKGNRSVAEYVGKMKALADEMASAGKALDDEELVSYILAGLDFDYN 145
Query: 304 PITTHLQEKTN-LTWPDMHASLINYESHLQQL 212
+ T + +T+ ++ +++ L+ +ES L+ L
Sbjct: 146 SVVTTVTGRTDPISVNELYGLLVGFESRLELL 177
>emb|CAN78447.1| hypothetical protein VITISV_026810 [Vitis vinifera]
Length = 1171
Score = 67.0 bits (162), Expect = 4e-09
Identities = 36/91 (39%), Positives = 51/91 (56%), Gaps = 3/91 (3%)
Frame = -2
Query: 484 RARIQICRTGIQTTRKGSRSMVQYLATLKEFVDSLAAAGSPFLDADLISYTLAGLDTDYL 305
R+RI + +QT +G++S +YL + K D LAAAG P D DLIS+ L GL + Y
Sbjct: 119 RSRISHLKRQLQTLTQGTKSCSEYLESAKTLADQLAAAGKPVDDQDLISFLLGGLQSSYT 178
Query: 304 PITTHL---QEKTNLTWPDMHASLINYESHL 221
P T +T+ T+ D A L+ YE+ L
Sbjct: 179 PFVTSFNFASRETDFTFEDFQAELLGYENLL 209
>emb|CAH67225.1| OSIGBa0145M07.7 [Oryza sativa Indica Group]
Length = 1087
Score = 66.2 bits (160), Expect = 6e-09
Identities = 32/88 (36%), Positives = 48/88 (54%)
Frame = -2
Query: 484 RARIQICRTGIQTTRKGSRSMVQYLATLKEFVDSLAAAGSPFLDADLISYTLAGLDTDYL 305
+ARI R + KG S Y +K D +AAAG D D++SY L GLD DY
Sbjct: 114 KARIIQIRAQLARELKGDSSAAAYFTKMKGLADEMAAAGKKLDDDDIVSYILGGLDADYN 173
Query: 304 PITTHLQEKTNLTWPDMHASLINYESHL 221
P+ + K ++ D++A L+++E+HL
Sbjct: 174 PLVASVSSKDYISLSDLYAQLLSFEAHL 201
>emb|CAE05450.3| OSJNBa0073E02.10 [Oryza sativa Japonica Group]
Length = 1131
Score = 66.2 bits (160), Expect = 6e-09
Identities = 32/88 (36%), Positives = 48/88 (54%)
Frame = -2
Query: 484 RARIQICRTGIQTTRKGSRSMVQYLATLKEFVDSLAAAGSPFLDADLISYTLAGLDTDYL 305
+ARI R + KG S Y +K D +AAAG D D++SY L GLD DY
Sbjct: 114 KARIIQIRAQLARELKGDSSAAAYFTKMKGLADEMAAAGKKLDDDDIVSYILGGLDADYN 173
Query: 304 PITTHLQEKTNLTWPDMHASLINYESHL 221
P+ + K ++ D++A L+++E+HL
Sbjct: 174 PLVASVSSKDYISLSDLYAQLLSFEAHL 201
>gb|ACV42639.1| gag/pol [Oryza sativa Japonica Group]
Length = 1448
Score = 65.9 bits (159), Expect = 8e-09
Identities = 37/123 (30%), Positives = 68/123 (55%), Gaps = 1/123 (0%)
Frame = -2
Query: 586 LLMRVSPCASTTWTNRMSEISFSTGSRRISLLHIRARIQICRTGIQTTRKGSRSMVQYLA 407
+L++V+ C + R E +STG+R AR R + T+KG+ + +Y+A
Sbjct: 99 VLIQVATCKTAAEAWRNIEALYSTGTR--------ARAVNTRLALTNTKKGTMKIAEYVA 150
Query: 406 TLKEFVDSLAAAGSPFLDADLISYTLAGLDTDYLPITTHLQEKTN-LTWPDMHASLINYE 230
++ D +AA G P + L+ Y +AGL D+ PI ++ K+N +T ++++ L+N+E
Sbjct: 151 KMRALCDEMAAGGRPLDEEGLVQYIIAGLTEDFSPIVSNPCNKSNPITVGELYSQLVNFE 210
Query: 229 SHL 221
+ L
Sbjct: 211 TLL 213
>gb|AAP94600.1| putative copia-like retrotransposon Hopscotch polyprotein [Zea
mays]
Length = 969
Score = 65.9 bits (159), Expect = 8e-09
Identities = 30/89 (33%), Positives = 56/89 (62%), Gaps = 1/89 (1%)
Frame = -2
Query: 484 RARIQICRTGIQTTRKGSRSMVQYLATLKEFVDSLAAAGSPFLDADLISYTLAGLDTDYL 305
RAR R + TT+KGS ++ +Y +K + D +AAAG P D +++ Y L GL+ ++L
Sbjct: 93 RARAVNLRLALSTTKKGSMTVAEYYTKMKGYGDEMAAAGRPLQDEEMVEYILTGLEEEFL 152
Query: 304 PITTHLQEKTN-LTWPDMHASLINYESHL 221
P+ + L + + ++ D+++ L+N+E+ L
Sbjct: 153 PMVSALVTRVDPISLEDLYSQLLNFETKL 181
>gb|AAL66754.1|AF464738_5 putative copia-like retrotransposon Hopscotch polyprotein [Zea
mays]
Length = 1313
Score = 65.9 bits (159), Expect = 8e-09
Identities = 30/89 (33%), Positives = 56/89 (62%), Gaps = 1/89 (1%)
Frame = -2
Query: 484 RARIQICRTGIQTTRKGSRSMVQYLATLKEFVDSLAAAGSPFLDADLISYTLAGLDTDYL 305
RAR R + TT+KGS ++ +Y +K + D +AAAG P D +++ Y L GL+ ++L
Sbjct: 93 RARAVNLRLALSTTKKGSMTVAEYYTKMKGYGDEMAAAGRPLQDEEMVEYILTGLEEEFL 152
Query: 304 PITTHLQEKTN-LTWPDMHASLINYESHL 221
P+ + L + + ++ D+++ L+N+E+ L
Sbjct: 153 PMVSALVTRVDPISLEDLYSQLLNFETKL 181
>ref|XP_006376191.1| hypothetical protein POPTR_0013s10690g [Populus trichocarpa]
gi|550325462|gb|ERP53988.1| hypothetical protein
POPTR_0013s10690g [Populus trichocarpa]
Length = 261
Score = 65.5 bits (158), Expect = 1e-08
Identities = 41/123 (33%), Positives = 68/123 (55%), Gaps = 1/123 (0%)
Frame = -2
Query: 556 TTWTNRMSEISFSTGSRRISLLHIRARIQICRTGIQTTRKGSRSMVQYLATLKEFVDSLA 377
TTW E +FS+ S+ ARI R +Q+T+KGS SM+ Y+ +K D+LA
Sbjct: 88 TTWN--ALEKTFSSSSK--------ARIMQLRLELQSTKKGSLSMIDYIMKVKGAADNLA 137
Query: 376 AAGSPFLDADLISYTLAGLDTDYLPITTHLQEKTN-LTWPDMHASLINYESHLQQLTALS 200
A G P L+ D + L GL +DY + T + + + ++ +H+ L+ +E L+Q ++L
Sbjct: 138 AIGEPVLEQDQVMNLLGGLGSDYNAVVTAINIRDDKISIEAVHSMLLAFEHRLEQQSSLD 197
Query: 199 MLS 191
+S
Sbjct: 198 HIS 200
>emb|CAN67546.1| hypothetical protein VITISV_027734 [Vitis vinifera]
Length = 1635
Score = 65.1 bits (157), Expect = 1e-08
Identities = 35/99 (35%), Positives = 58/99 (58%), Gaps = 1/99 (1%)
Frame = -2
Query: 484 RARIQICRTGIQTTRKGSRSMVQYLATLKEFVDSLAAAGSPFLDADLISYTLAGLDTDYL 305
RARI R +Q+T+KGS SM+ Y+ +K DSLAA G P L+ D + L GL +DY
Sbjct: 26 RARIMQLRLELQSTKKGSLSMIDYIMKVKGAADSLAAIGEPILEQDQVMNLLDGLGSDYN 85
Query: 304 PITTHLQEKTN-LTWPDMHASLINYESHLQQLTALSMLS 191
+ T + + + ++ +H+ L+ +E L+Q +++ S
Sbjct: 86 AVVTAINIRDDKISIEAVHSMLLAFEHRLEQQSSIEQFS 124
>gb|EAZ20340.1| hypothetical protein OsJ_35949 [Oryza sativa Japonica Group]
Length = 216
Score = 65.1 bits (157), Expect = 1e-08
Identities = 33/94 (35%), Positives = 55/94 (58%), Gaps = 1/94 (1%)
Frame = -2
Query: 484 RARIQICRTGIQTTRKGSRSMVQYLATLKEFVDSLAAAGSPFLDADLISYTLAGLDTDYL 305
RA+ R + TTRKG+ + Y+ +K F D +AAAG P D ++++Y LAGLD +Y
Sbjct: 123 RAQSFNTRVAMTTTRKGNLKITYYINRMKSFSDEMAAAGKPMDDEEIVAYILAGLDEEYD 182
Query: 304 PITTHLQEKTN-LTWPDMHASLINYESHLQQLTA 206
P+ + + +T +T D + L+++E L + A
Sbjct: 183 PVVSVITGRTEAVTIADAYTQLLSFEERLSRRAA 216
>gb|AAT47103.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 307
Score = 65.1 bits (157), Expect = 1e-08
Identities = 32/96 (33%), Positives = 57/96 (59%), Gaps = 1/96 (1%)
Frame = -2
Query: 484 RARIQICRTGIQTTRKGSRSMVQYLATLKEFVDSLAAAGSPFLDADLISYTLAGLDTDYL 305
RARI R + +T+KG+R++ +Y+ +K D +++A P D +L+SY AGLD DY
Sbjct: 82 RARIINIRMALSSTKKGTRTIAEYVGKMKSLADDMSSARKPLDDEELVSYIFAGLDFDYN 141
Query: 304 PITTHLQEKT-NLTWPDMHASLINYESHLQQLTALS 200
+ + + + ++T + +A L+ +ES L+ L S
Sbjct: 142 SVVSSIAGRADSITMSEAYALLVGFESRLELLQGSS 177
>emb|CAN77295.1| hypothetical protein VITISV_005638 [Vitis vinifera]
Length = 1198
Score = 64.3 bits (155), Expect = 2e-08
Identities = 36/102 (35%), Positives = 58/102 (56%), Gaps = 1/102 (0%)
Frame = -2
Query: 484 RARIQICRTGIQTTRKGSRSMVQYLATLKEFVDSLAAAGSPFLDADLISYTLAGLDTDYL 305
RARI R +Q+T+KGS SM+ Y+ +K DSLAA G P + D + L GL +DY
Sbjct: 26 RARIMQLRLELQSTKKGSLSMIDYIMKVKGAADSLAAIGEPVSEQDQVMNLLGGLGSDYN 85
Query: 304 PITTHLQEKTN-LTWPDMHASLINYESHLQQLTALSMLSITS 182
+ T + K + ++ +H+ L+ +E L+Q +++ S S
Sbjct: 86 AVVTAINIKDDKISIEVVHSMLLAFEHRLEQQSSIEQFSSIS 127