BLASTX nr result

ID: Sinomenium22_contig00048960 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium22_contig00048960
         (262 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284038.1| PREDICTED: UPF0497 membrane protein 14 [Viti...    73   5e-11
emb|CAN71023.1| hypothetical protein VITISV_012198 [Vitis vinifera]    69   5e-10
ref|XP_002304215.2| integral membrane family protein [Populus tr...    59   9e-07
ref|XP_004235654.1| PREDICTED: CASP-like protein GSVIVT000343320...    57   2e-06

>ref|XP_002284038.1| PREDICTED: UPF0497 membrane protein 14 [Vitis vinifera]
           gi|226713186|sp|A7P756.1|CSPLD_VITVI RecName:
           Full=CASP-like protein GSVIVT00034332001
          Length = 210

 Score = 72.8 bits (177), Expect = 5e-11
 Identities = 37/76 (48%), Positives = 51/76 (67%)
 Frame = -1

Query: 229 MNGQKTAPDFGIQMPEGKLSVELADVSTSSPLVSDGSGRNGHRKTDVVHAIVRLVCCFSS 50
           MNG KT P+ GIQ+PE K++ E   +S   PLV   S R+  R TDV H ++R VC  +S
Sbjct: 1   MNGLKTPPEIGIQLPEAKVAAETGTMS--GPLVPPRSDRSVRRGTDVAHVVLRFVCLLTS 58

Query: 49  VMAMALMVTAEERATI 2
           V+A++LM TA+E A+I
Sbjct: 59  VIALSLMATAKEAASI 74


>emb|CAN71023.1| hypothetical protein VITISV_012198 [Vitis vinifera]
          Length = 210

 Score = 69.3 bits (168), Expect = 5e-10
 Identities = 36/76 (47%), Positives = 50/76 (65%)
 Frame = -1

Query: 229 MNGQKTAPDFGIQMPEGKLSVELADVSTSSPLVSDGSGRNGHRKTDVVHAIVRLVCCFSS 50
           MNG KT P+  IQ+PE K++ E   +S   PLV   S R+  R TDV H ++R VC  +S
Sbjct: 1   MNGLKTPPEIVIQLPEAKVAAETGTMS--GPLVPPRSDRSVRRGTDVAHVVLRFVCLLTS 58

Query: 49  VMAMALMVTAEERATI 2
           V+A++LM TA+E A+I
Sbjct: 59  VIALSLMATAKEAASI 74


>ref|XP_002304215.2| integral membrane family protein [Populus trichocarpa]
           gi|586830458|sp|B9GXD6.2|CSPLO_POPTR RecName:
           Full=CASP-like protein POPTRDRAFT_553757
           gi|550342428|gb|EEE79194.2| integral membrane family
           protein [Populus trichocarpa]
          Length = 224

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 32/84 (38%), Positives = 50/84 (59%), Gaps = 8/84 (9%)
 Frame = -1

Query: 229 MNGQKTAP--DFGIQMPEGKLSVELADVSTSSPLVSDGSG------RNGHRKTDVVHAIV 74
           MNGQK AP  +  +Q+PE K++ +    + S PLV    G      R   RK +V+H ++
Sbjct: 3   MNGQKLAPAAEVAVQLPESKVAADNISGTMSGPLVGASGGGTTAAMRPFGRKAEVMHVLL 62

Query: 73  RLVCCFSSVMAMALMVTAEERATI 2
           RL+C  +SV A++ M TA++ +TI
Sbjct: 63  RLLCIITSVAALSFMFTAQQSSTI 86


>ref|XP_004235654.1| PREDICTED: CASP-like protein GSVIVT00034332001-like [Solanum
           lycopersicum]
          Length = 208

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 32/76 (42%), Positives = 48/76 (63%)
 Frame = -1

Query: 229 MNGQKTAPDFGIQMPEGKLSVELADVSTSSPLVSDGSGRNGHRKTDVVHAIVRLVCCFSS 50
           +NG K  PD GIQ+PE K+ ++    S+S P V     RN + K  V+  I+R +C  +S
Sbjct: 2   ING-KNPPDVGIQLPESKMGIDTVTDSSSGPPV-----RNVNGKAQVMQVILRTLCLVTS 55

Query: 49  VMAMALMVTAEERATI 2
           V A++LMVTA++ +TI
Sbjct: 56  VTALSLMVTAKQASTI 71


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