BLASTX nr result
ID: Sinomenium22_contig00048765
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium22_contig00048765
(552 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004142707.1| PREDICTED: pentatricopeptide repeat-containi... 192 7e-55
ref|XP_004161177.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 192 7e-55
ref|XP_002266503.1| PREDICTED: pentatricopeptide repeat-containi... 193 8e-54
emb|CBI39452.3| unnamed protein product [Vitis vinifera] 193 8e-54
emb|CAN73209.1| hypothetical protein VITISV_002838 [Vitis vinifera] 192 1e-53
ref|XP_006358175.1| PREDICTED: pentatricopeptide repeat-containi... 186 4e-53
ref|XP_007052225.1| Tetratricopeptide repeat (TPR)-like superfam... 195 1e-52
ref|XP_004510607.1| PREDICTED: pentatricopeptide repeat-containi... 192 4e-52
ref|XP_006375239.1| hypothetical protein POPTR_0014s05550g [Popu... 188 9e-52
ref|XP_004235443.1| PREDICTED: pentatricopeptide repeat-containi... 185 3e-51
ref|XP_007219156.1| hypothetical protein PRUPE_ppa016282mg, part... 186 5e-50
gb|EXB97272.1| hypothetical protein L484_024133 [Morus notabilis] 186 8e-50
ref|XP_006592805.1| PREDICTED: pentatricopeptide repeat-containi... 181 7e-49
ref|XP_003539494.2| PREDICTED: pentatricopeptide repeat-containi... 181 7e-49
ref|XP_006592806.1| PREDICTED: pentatricopeptide repeat-containi... 181 7e-49
ref|XP_003622527.1| Pentatricopeptide repeat-containing protein ... 177 1e-47
ref|XP_007138408.1| hypothetical protein PHAVU_009G206300g [Phas... 178 2e-47
gb|EXB37231.1| hypothetical protein L484_020290 [Morus notabilis] 177 1e-46
ref|XP_002511627.1| pentatricopeptide repeat-containing protein,... 189 3e-46
ref|XP_004308525.1| PREDICTED: pentatricopeptide repeat-containi... 169 2e-45
>ref|XP_004142707.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
chloroplastic-like [Cucumis sativus]
Length = 757
Score = 192 bits (487), Expect(2) = 7e-55
Identities = 101/153 (66%), Positives = 113/153 (73%), Gaps = 1/153 (0%)
Frame = -3
Query: 550 Q*SIKVFTTMKSIGVRPSVITFXXXXXXXXXXXRTKMVKKVFAEMPST-GISPDVFTFNI 374
Q SIKVFT MKS GV PSV+TF RT M KKV+ EM ST G++PD FTFNI
Sbjct: 166 QESIKVFTIMKSHGVSPSVVTFNSLLTILLKRGRTNMAKKVYDEMLSTYGVTPDTFTFNI 225
Query: 373 LIRGFCLNSMVDDGFRFFKEMSRFQIHPDVVTYNTLVNGLCRAGKVKTASNLVKGMCGKG 194
LIRGFC+N MVDDGFR F ++SRF PDVVTYNTLV+GLCRAGKV A N+VKGM K
Sbjct: 226 LIRGFCMNGMVDDGFRIFNDLSRFGCEPDVVTYNTLVDGLCRAGKVTVAYNVVKGMGKKS 285
Query: 193 SGLKPNVVTYTTLMRGYCEKQSIADALAVFEEL 95
L PNVVTYTTL+RGYC K+ I ALAVFEE+
Sbjct: 286 VDLNPNVVTYTTLIRGYCAKREIEKALAVFEEM 318
Score = 48.1 bits (113), Expect(2) = 7e-55
Identities = 20/30 (66%), Positives = 26/30 (86%)
Frame = -2
Query: 98 IINCGMKQNRITYNTLVQGLCEAREFEMIK 9
++N G+K N ITYNTL++GLCEAR+FE IK
Sbjct: 318 MVNQGLKANNITYNTLIKGLCEARKFEKIK 347
Score = 84.7 bits (208), Expect(2) = 8e-15
Identities = 44/150 (29%), Positives = 75/150 (50%), Gaps = 2/150 (1%)
Frame = -3
Query: 538 KVFTTMKSIGVRPSVITFXXXXXXXXXXXRTKMVKKVFAEM--PSTGISPDVFTFNILIR 365
++F + G P V+T+ + + V M S ++P+V T+ LIR
Sbjct: 241 RIFNDLSRFGCEPDVVTYNTLVDGLCRAGKVTVAYNVVKGMGKKSVDLNPNVVTYTTLIR 300
Query: 364 GFCLNSMVDDGFRFFKEMSRFQIHPDVVTYNTLVNGLCRAGKVKTASNLVKGMCGKGSGL 185
G+C ++ F+EM + + +TYNTL+ GLC A K + ++++G G G+
Sbjct: 301 GYCAKREIEKALAVFEEMVNQGLKANNITYNTLIKGLCEARKFEKIKDILEGTAGDGT-F 359
Query: 184 KPNVVTYTTLMRGYCEKQSIADALAVFEEL 95
P+ T+ TLM +C ++ DAL VFE +
Sbjct: 360 SPDTCTFNTLMHCHCHAGNLDDALKVFERM 389
Score = 21.2 bits (43), Expect(2) = 8e-15
Identities = 7/16 (43%), Positives = 11/16 (68%)
Frame = -2
Query: 65 TYNTLVQGLCEAREFE 18
TY+ LV+ LC+ +E
Sbjct: 400 TYSALVRSLCQGGHYE 415
Score = 71.6 bits (174), Expect(2) = 1e-10
Identities = 44/156 (28%), Positives = 70/156 (44%), Gaps = 6/156 (3%)
Frame = -3
Query: 544 SIKVFTTMKSIGVRPSVITFXXXXXXXXXXXRTKMVKKVFAEMPSTG-ISPDVFTFNILI 368
++ VF M + G++ + IT+ + + +K + G SPD TFN L+
Sbjct: 311 ALAVFEEMVNQGLKANNITYNTLIKGLCEARKFEKIKDILEGTAGDGTFSPDTCTFNTLM 370
Query: 367 RGFCLNSMVDDGFRFFKEMSRFQIHPDVVTYNTLVNGLCRAGKVKTASNLVKGMCGK--- 197
C +DD + F+ MS +I PD TY+ LV LC+ G + A +L+ + +
Sbjct: 371 HCHCHAGNLDDALKVFERMSELKIQPDSATYSALVRSLCQGGHYEKAEDLLDKLLERKIL 430
Query: 196 --GSGLKPNVVTYTTLMRGYCEKQSIADALAVFEEL 95
G G KP V Y + + CE A F +L
Sbjct: 431 LSGDGCKPLVAAYNPIFKYLCETGKTKKAEKAFRQL 466
Score = 20.4 bits (41), Expect(2) = 1e-10
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = -2
Query: 77 QNRITYNTLVQGLCEAREFE 18
Q+ +Y TL+ G C+ FE
Sbjct: 472 QDPPSYKTLIMGHCKEGTFE 491
>ref|XP_004161177.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g02060, chloroplastic-like [Cucumis sativus]
Length = 720
Score = 192 bits (487), Expect(2) = 7e-55
Identities = 101/153 (66%), Positives = 113/153 (73%), Gaps = 1/153 (0%)
Frame = -3
Query: 550 Q*SIKVFTTMKSIGVRPSVITFXXXXXXXXXXXRTKMVKKVFAEMPST-GISPDVFTFNI 374
Q SIKVFT MKS GV PSV+TF RT M KKV+ EM ST G++PD FTFNI
Sbjct: 166 QESIKVFTIMKSHGVSPSVVTFNSLLTILLKRGRTNMAKKVYDEMLSTYGVTPDTFTFNI 225
Query: 373 LIRGFCLNSMVDDGFRFFKEMSRFQIHPDVVTYNTLVNGLCRAGKVKTASNLVKGMCGKG 194
LIRGFC+N MVDDGFR F ++SRF PDVVTYNTLV+GLCRAGKV A N+VKGM K
Sbjct: 226 LIRGFCMNGMVDDGFRIFNDLSRFGCEPDVVTYNTLVDGLCRAGKVTVAYNVVKGMGKKS 285
Query: 193 SGLKPNVVTYTTLMRGYCEKQSIADALAVFEEL 95
L PNVVTYTTL+RGYC K+ I ALAVFEE+
Sbjct: 286 VDLNPNVVTYTTLIRGYCAKREIEKALAVFEEM 318
Score = 48.1 bits (113), Expect(2) = 7e-55
Identities = 20/30 (66%), Positives = 26/30 (86%)
Frame = -2
Query: 98 IINCGMKQNRITYNTLVQGLCEAREFEMIK 9
++N G+K N ITYNTL++GLCEAR+FE IK
Sbjct: 318 MVNQGLKANNITYNTLIKGLCEARKFEKIK 347
Score = 84.7 bits (208), Expect(2) = 8e-15
Identities = 44/150 (29%), Positives = 75/150 (50%), Gaps = 2/150 (1%)
Frame = -3
Query: 538 KVFTTMKSIGVRPSVITFXXXXXXXXXXXRTKMVKKVFAEM--PSTGISPDVFTFNILIR 365
++F + G P V+T+ + + V M S ++P+V T+ LIR
Sbjct: 241 RIFNDLSRFGCEPDVVTYNTLVDGLCRAGKVTVAYNVVKGMGKKSVDLNPNVVTYTTLIR 300
Query: 364 GFCLNSMVDDGFRFFKEMSRFQIHPDVVTYNTLVNGLCRAGKVKTASNLVKGMCGKGSGL 185
G+C ++ F+EM + + +TYNTL+ GLC A K + ++++G G G+
Sbjct: 301 GYCAKREIEKALAVFEEMVNQGLKANNITYNTLIKGLCEARKFEKIKDILEGTAGDGT-F 359
Query: 184 KPNVVTYTTLMRGYCEKQSIADALAVFEEL 95
P+ T+ TLM +C ++ DAL VFE +
Sbjct: 360 SPDTCTFNTLMHCHCHAGNLDDALKVFERM 389
Score = 21.2 bits (43), Expect(2) = 8e-15
Identities = 7/16 (43%), Positives = 11/16 (68%)
Frame = -2
Query: 65 TYNTLVQGLCEAREFE 18
TY+ LV+ LC+ +E
Sbjct: 400 TYSALVRSLCQGGHYE 415
Score = 71.6 bits (174), Expect(2) = 1e-10
Identities = 44/156 (28%), Positives = 70/156 (44%), Gaps = 6/156 (3%)
Frame = -3
Query: 544 SIKVFTTMKSIGVRPSVITFXXXXXXXXXXXRTKMVKKVFAEMPSTG-ISPDVFTFNILI 368
++ VF M + G++ + IT+ + + +K + G SPD TFN L+
Sbjct: 311 ALAVFEEMVNQGLKANNITYNTLIKGLCEARKFEKIKDILEGTAGDGTFSPDTCTFNTLM 370
Query: 367 RGFCLNSMVDDGFRFFKEMSRFQIHPDVVTYNTLVNGLCRAGKVKTASNLVKGMCGK--- 197
C +DD + F+ MS +I PD TY+ LV LC+ G + A +L+ + +
Sbjct: 371 HCHCHAGNLDDALKVFERMSELKIQPDSATYSALVRSLCQGGHYEKAEDLLDKLLERKIL 430
Query: 196 --GSGLKPNVVTYTTLMRGYCEKQSIADALAVFEEL 95
G G KP V Y + + CE A F +L
Sbjct: 431 LSGDGCKPLVAAYNPIFKYLCETGKTKKAEKAFRQL 466
Score = 20.4 bits (41), Expect(2) = 1e-10
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = -2
Query: 77 QNRITYNTLVQGLCEAREFE 18
Q+ +Y TL+ G C+ FE
Sbjct: 472 QDPPSYKTLIMGHCKEGTFE 491
>ref|XP_002266503.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
chloroplastic-like [Vitis vinifera]
Length = 746
Score = 193 bits (490), Expect(2) = 8e-54
Identities = 99/153 (64%), Positives = 116/153 (75%), Gaps = 1/153 (0%)
Frame = -3
Query: 550 Q*SIKVFTTMKSIGVRPSVITFXXXXXXXXXXXRTKMVKKVFAEMPST-GISPDVFTFNI 374
Q SIKVF TMK IGV PSV+TF RT M K++F EM T G++PD +TFNI
Sbjct: 182 QESIKVFKTMKEIGVSPSVVTFNSLLSIVLKRGRTSMAKQLFDEMLDTYGVTPDTYTFNI 241
Query: 373 LIRGFCLNSMVDDGFRFFKEMSRFQIHPDVVTYNTLVNGLCRAGKVKTASNLVKGMCGKG 194
LIRGFC+NSMVD+GF FFKEMSRF+ PDVVTYNTLV+GLCRAGKVK A N+VKGM K
Sbjct: 242 LIRGFCMNSMVDEGFWFFKEMSRFKCDPDVVTYNTLVDGLCRAGKVKIAHNVVKGMVKKS 301
Query: 193 SGLKPNVVTYTTLMRGYCEKQSIADALAVFEEL 95
L PNVVTYTTL+RGYC KQ +A+AL++ E+
Sbjct: 302 PNLSPNVVTYTTLIRGYCMKQDMAEALSLLAEM 334
Score = 43.5 bits (101), Expect(2) = 8e-54
Identities = 17/30 (56%), Positives = 26/30 (86%)
Frame = -2
Query: 98 IINCGMKQNRITYNTLVQGLCEAREFEMIK 9
+++ G+K N+ITYNTL+QGLCEA++ + IK
Sbjct: 334 MVSRGLKPNKITYNTLIQGLCEAQKLDKIK 363
Score = 82.8 bits (203), Expect(2) = 4e-14
Identities = 45/148 (30%), Positives = 73/148 (49%), Gaps = 2/148 (1%)
Frame = -3
Query: 532 FTTMKSIGVRPSVITFXXXXXXXXXXXRTKMVKKVFAEM--PSTGISPDVFTFNILIRGF 359
F M P V+T+ + K+ V M S +SP+V T+ LIRG+
Sbjct: 259 FKEMSRFKCDPDVVTYNTLVDGLCRAGKVKIAHNVVKGMVKKSPNLSPNVVTYTTLIRGY 318
Query: 358 CLNSMVDDGFRFFKEMSRFQIHPDVVTYNTLVNGLCRAGKVKTASNLVKGMCGKGSGLKP 179
C+ + + EM + P+ +TYNTL+ GLC A K+ +++GM G G G P
Sbjct: 319 CMKQDMAEALSLLAEMVSRGLKPNKITYNTLIQGLCEAQKLDKIKEILEGMVGDG-GFIP 377
Query: 178 NVVTYTTLMRGYCEKQSIADALAVFEEL 95
+ T TL++ +C + +A +VFE++
Sbjct: 378 DTCTLNTLIKAHCTMGKLEEAFSVFEKM 405
Score = 20.8 bits (42), Expect(2) = 4e-14
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = -2
Query: 65 TYNTLVQGLCEAREF 21
TY+ LV+ LC+ +F
Sbjct: 416 TYSVLVRSLCQRGDF 430
Score = 68.2 bits (165), Expect = 1e-09
Identities = 41/156 (26%), Positives = 66/156 (42%), Gaps = 6/156 (3%)
Frame = -3
Query: 544 SIKVFTTMKSIGVRPSVITFXXXXXXXXXXXRTKMVKKVFAEMPSTG-ISPDVFTFNILI 368
++ + M S G++P+ IT+ + +K++ M G PD T N LI
Sbjct: 327 ALSLLAEMVSRGLKPNKITYNTLIQGLCEAQKLDKIKEILEGMVGDGGFIPDTCTLNTLI 386
Query: 367 RGFCLNSMVDDGFRFFKEMSRFQIHPDVVTYNTLVNGLCRAGKVKTASNLVKGMCGK--- 197
+ C +++ F F++MS ++ PD TY+ LV LC+ G + A + K
Sbjct: 387 KAHCTMGKLEEAFSVFEKMSELRVQPDSATYSVLVRSLCQRGDFRRAEEFFDELAEKEIL 446
Query: 196 --GSGLKPNVVTYTTLMRGYCEKQSIADALAVFEEL 95
G KP V Y + C A VF +L
Sbjct: 447 LHDVGCKPLVAAYNPMFEYLCSNGKTKKAERVFRQL 482
Score = 53.9 bits (128), Expect(2) = 2e-07
Identities = 27/96 (28%), Positives = 48/96 (50%)
Frame = -3
Query: 382 FNILIRGFCLNSMVDDGFRFFKEMSRFQIHPDVVTYNTLVNGLCRAGKVKTASNLVKGMC 203
FN LIR + + + + FK M + P VVT+N+L++ + + G+ A L M
Sbjct: 168 FNSLIRSYGWAGLFQESIKVFKTMKEIGVSPSVVTFNSLLSIVLKRGRTSMAKQLFDEML 227
Query: 202 GKGSGLKPNVVTYTTLMRGYCEKQSIADALAVFEEL 95
G+ P+ T+ L+RG+C + + F+E+
Sbjct: 228 DT-YGVTPDTYTFNILIRGFCMNSMVDEGFWFFKEM 262
Score = 26.6 bits (57), Expect(2) = 2e-07
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = -2
Query: 68 ITYNTLVQGLCEA 30
+TYNTLV GLC A
Sbjct: 272 VTYNTLVDGLCRA 284
>emb|CBI39452.3| unnamed protein product [Vitis vinifera]
Length = 718
Score = 193 bits (490), Expect(2) = 8e-54
Identities = 99/153 (64%), Positives = 116/153 (75%), Gaps = 1/153 (0%)
Frame = -3
Query: 550 Q*SIKVFTTMKSIGVRPSVITFXXXXXXXXXXXRTKMVKKVFAEMPST-GISPDVFTFNI 374
Q SIKVF TMK IGV PSV+TF RT M K++F EM T G++PD +TFNI
Sbjct: 182 QESIKVFKTMKEIGVSPSVVTFNSLLSIVLKRGRTSMAKQLFDEMLDTYGVTPDTYTFNI 241
Query: 373 LIRGFCLNSMVDDGFRFFKEMSRFQIHPDVVTYNTLVNGLCRAGKVKTASNLVKGMCGKG 194
LIRGFC+NSMVD+GF FFKEMSRF+ PDVVTYNTLV+GLCRAGKVK A N+VKGM K
Sbjct: 242 LIRGFCMNSMVDEGFWFFKEMSRFKCDPDVVTYNTLVDGLCRAGKVKIAHNVVKGMVKKS 301
Query: 193 SGLKPNVVTYTTLMRGYCEKQSIADALAVFEEL 95
L PNVVTYTTL+RGYC KQ +A+AL++ E+
Sbjct: 302 PNLSPNVVTYTTLIRGYCMKQDMAEALSLLAEM 334
Score = 43.5 bits (101), Expect(2) = 8e-54
Identities = 17/30 (56%), Positives = 26/30 (86%)
Frame = -2
Query: 98 IINCGMKQNRITYNTLVQGLCEAREFEMIK 9
+++ G+K N+ITYNTL+QGLCEA++ + IK
Sbjct: 334 MVSRGLKPNKITYNTLIQGLCEAQKLDKIK 363
Score = 82.8 bits (203), Expect(2) = 4e-14
Identities = 45/148 (30%), Positives = 73/148 (49%), Gaps = 2/148 (1%)
Frame = -3
Query: 532 FTTMKSIGVRPSVITFXXXXXXXXXXXRTKMVKKVFAEM--PSTGISPDVFTFNILIRGF 359
F M P V+T+ + K+ V M S +SP+V T+ LIRG+
Sbjct: 259 FKEMSRFKCDPDVVTYNTLVDGLCRAGKVKIAHNVVKGMVKKSPNLSPNVVTYTTLIRGY 318
Query: 358 CLNSMVDDGFRFFKEMSRFQIHPDVVTYNTLVNGLCRAGKVKTASNLVKGMCGKGSGLKP 179
C+ + + EM + P+ +TYNTL+ GLC A K+ +++GM G G G P
Sbjct: 319 CMKQDMAEALSLLAEMVSRGLKPNKITYNTLIQGLCEAQKLDKIKEILEGMVGDG-GFIP 377
Query: 178 NVVTYTTLMRGYCEKQSIADALAVFEEL 95
+ T TL++ +C + +A +VFE++
Sbjct: 378 DTCTLNTLIKAHCTMGKLEEAFSVFEKM 405
Score = 20.8 bits (42), Expect(2) = 4e-14
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = -2
Query: 65 TYNTLVQGLCEAREF 21
TY+ LV+ LC+ +F
Sbjct: 416 TYSVLVRSLCQRGDF 430
Score = 68.2 bits (165), Expect = 1e-09
Identities = 41/156 (26%), Positives = 66/156 (42%), Gaps = 6/156 (3%)
Frame = -3
Query: 544 SIKVFTTMKSIGVRPSVITFXXXXXXXXXXXRTKMVKKVFAEMPSTG-ISPDVFTFNILI 368
++ + M S G++P+ IT+ + +K++ M G PD T N LI
Sbjct: 327 ALSLLAEMVSRGLKPNKITYNTLIQGLCEAQKLDKIKEILEGMVGDGGFIPDTCTLNTLI 386
Query: 367 RGFCLNSMVDDGFRFFKEMSRFQIHPDVVTYNTLVNGLCRAGKVKTASNLVKGMCGK--- 197
+ C +++ F F++MS ++ PD TY+ LV LC+ G + A + K
Sbjct: 387 KAHCTMGKLEEAFSVFEKMSELRVQPDSATYSVLVRSLCQRGDFRRAEEFFDELAEKEIL 446
Query: 196 --GSGLKPNVVTYTTLMRGYCEKQSIADALAVFEEL 95
G KP V Y + C A VF +L
Sbjct: 447 LHDVGCKPLVAAYNPMFEYLCSNGKTKKAERVFRQL 482
Score = 53.9 bits (128), Expect(2) = 2e-07
Identities = 27/96 (28%), Positives = 48/96 (50%)
Frame = -3
Query: 382 FNILIRGFCLNSMVDDGFRFFKEMSRFQIHPDVVTYNTLVNGLCRAGKVKTASNLVKGMC 203
FN LIR + + + + FK M + P VVT+N+L++ + + G+ A L M
Sbjct: 168 FNSLIRSYGWAGLFQESIKVFKTMKEIGVSPSVVTFNSLLSIVLKRGRTSMAKQLFDEML 227
Query: 202 GKGSGLKPNVVTYTTLMRGYCEKQSIADALAVFEEL 95
G+ P+ T+ L+RG+C + + F+E+
Sbjct: 228 DT-YGVTPDTYTFNILIRGFCMNSMVDEGFWFFKEM 262
Score = 26.6 bits (57), Expect(2) = 2e-07
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = -2
Query: 68 ITYNTLVQGLCEA 30
+TYNTLV GLC A
Sbjct: 272 VTYNTLVDGLCRA 284
>emb|CAN73209.1| hypothetical protein VITISV_002838 [Vitis vinifera]
Length = 1024
Score = 192 bits (489), Expect(2) = 1e-53
Identities = 98/151 (64%), Positives = 115/151 (76%), Gaps = 1/151 (0%)
Frame = -3
Query: 544 SIKVFTTMKSIGVRPSVITFXXXXXXXXXXXRTKMVKKVFAEMPST-GISPDVFTFNILI 368
SIKVF TMK IGV PSV+TF RT M K++F EM T G++PD +TFNILI
Sbjct: 255 SIKVFKTMKEIGVSPSVVTFNSLLSIVLKRGRTSMAKQLFDEMLDTYGVTPDTYTFNILI 314
Query: 367 RGFCLNSMVDDGFRFFKEMSRFQIHPDVVTYNTLVNGLCRAGKVKTASNLVKGMCGKGSG 188
RGFC+NSMVD+GF FFKEMSRF+ PDVVTYNTLV+GLCRAGKVK A N+VKGM K
Sbjct: 315 RGFCMNSMVDEGFWFFKEMSRFKCDPDVVTYNTLVDGLCRAGKVKIAHNVVKGMVKKSPN 374
Query: 187 LKPNVVTYTTLMRGYCEKQSIADALAVFEEL 95
L PNVVTYTTL+RGYC KQ +A+AL++ E+
Sbjct: 375 LSPNVVTYTTLIRGYCMKQDMAEALSLLAEM 405
Score = 43.5 bits (101), Expect(2) = 1e-53
Identities = 17/30 (56%), Positives = 26/30 (86%)
Frame = -2
Query: 98 IINCGMKQNRITYNTLVQGLCEAREFEMIK 9
+++ G+K N+ITYNTL+QGLCEA++ + IK
Sbjct: 405 MVSRGLKPNKITYNTLIQGLCEAQKLDKIK 434
Score = 82.8 bits (203), Expect(2) = 4e-14
Identities = 45/148 (30%), Positives = 73/148 (49%), Gaps = 2/148 (1%)
Frame = -3
Query: 532 FTTMKSIGVRPSVITFXXXXXXXXXXXRTKMVKKVFAEM--PSTGISPDVFTFNILIRGF 359
F M P V+T+ + K+ V M S +SP+V T+ LIRG+
Sbjct: 330 FKEMSRFKCDPDVVTYNTLVDGLCRAGKVKIAHNVVKGMVKKSPNLSPNVVTYTTLIRGY 389
Query: 358 CLNSMVDDGFRFFKEMSRFQIHPDVVTYNTLVNGLCRAGKVKTASNLVKGMCGKGSGLKP 179
C+ + + EM + P+ +TYNTL+ GLC A K+ +++GM G G G P
Sbjct: 390 CMKQDMAEALSLLAEMVSRGLKPNKITYNTLIQGLCEAQKLDKIKEILEGMVGDG-GFIP 448
Query: 178 NVVTYTTLMRGYCEKQSIADALAVFEEL 95
+ T TL++ +C + +A +VFE++
Sbjct: 449 DTCTLNTLIKAHCTMGKLEEAFSVFEKM 476
Score = 20.8 bits (42), Expect(2) = 4e-14
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = -2
Query: 65 TYNTLVQGLCEAREF 21
TY+ LV+ LC+ +F
Sbjct: 487 TYSVLVRSLCQRGDF 501
Score = 68.2 bits (165), Expect = 1e-09
Identities = 41/156 (26%), Positives = 66/156 (42%), Gaps = 6/156 (3%)
Frame = -3
Query: 544 SIKVFTTMKSIGVRPSVITFXXXXXXXXXXXRTKMVKKVFAEMPSTG-ISPDVFTFNILI 368
++ + M S G++P+ IT+ + +K++ M G PD T N LI
Sbjct: 398 ALSLLAEMVSRGLKPNKITYNTLIQGLCEAQKLDKIKEILEGMVGDGGFIPDTCTLNTLI 457
Query: 367 RGFCLNSMVDDGFRFFKEMSRFQIHPDVVTYNTLVNGLCRAGKVKTASNLVKGMCGK--- 197
+ C +++ F F++MS ++ PD TY+ LV LC+ G + A + K
Sbjct: 458 KAHCTMGKLEEAFSVFEKMSELRVQPDSATYSVLVRSLCQRGDFRRAEEFFDELAEKEIL 517
Query: 196 --GSGLKPNVVTYTTLMRGYCEKQSIADALAVFEEL 95
G KP V Y + C A VF +L
Sbjct: 518 LHDVGCKPLVAAYNPMFEYLCSNGKTKKAERVFRQL 553
>ref|XP_006358175.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
chloroplastic-like isoform X1 [Solanum tuberosum]
Length = 718
Score = 186 bits (473), Expect(2) = 4e-53
Identities = 94/153 (61%), Positives = 114/153 (74%), Gaps = 1/153 (0%)
Frame = -3
Query: 550 Q*SIKVFTTMKSIGVRPSVITFXXXXXXXXXXXRTKMVKKVFAEMPST-GISPDVFTFNI 374
Q S+KVF MKS+G+ PSV+TF RT MV ++F EM T G PDV+TFNI
Sbjct: 173 QESLKVFKVMKSLGISPSVVTFNSLFSILLKRGRTGMVYELFDEMLKTFGAKPDVYTFNI 232
Query: 373 LIRGFCLNSMVDDGFRFFKEMSRFQIHPDVVTYNTLVNGLCRAGKVKTASNLVKGMCGKG 194
LIRGFC+NSMVD GFRFFKEM R + PDV+TYNT+V+GLCRAGKV+ A N++KGM +G
Sbjct: 233 LIRGFCMNSMVDKGFRFFKEMERHECEPDVITYNTIVDGLCRAGKVEIAHNVLKGMVKRG 292
Query: 193 SGLKPNVVTYTTLMRGYCEKQSIADALAVFEEL 95
L PNVV+YTTL+RGYCEKQ + AL VFEE+
Sbjct: 293 HQLSPNVVSYTTLVRGYCEKQEVERALDVFEEM 325
Score = 47.8 bits (112), Expect(2) = 4e-53
Identities = 20/30 (66%), Positives = 25/30 (83%)
Frame = -2
Query: 98 IINCGMKQNRITYNTLVQGLCEAREFEMIK 9
+I+CG+K ITYNTLVQGLCEA+ F+ IK
Sbjct: 325 MIDCGLKPTSITYNTLVQGLCEAKRFDRIK 354
Score = 78.6 bits (192), Expect = 1e-12
Identities = 45/150 (30%), Positives = 74/150 (49%), Gaps = 2/150 (1%)
Frame = -3
Query: 538 KVFTTMKSIGVRPSVITFXXXXXXXXXXXRTKMVKKVFAEMPSTG--ISPDVFTFNILIR 365
+ F M+ P VIT+ + ++ V M G +SP+V ++ L+R
Sbjct: 248 RFFKEMERHECEPDVITYNTIVDGLCRAGKVEIAHNVLKGMVKRGHQLSPNVVSYTTLVR 307
Query: 364 GFCLNSMVDDGFRFFKEMSRFQIHPDVVTYNTLVNGLCRAGKVKTASNLVKGMCGKGSGL 185
G+C V+ F+EM + P +TYNTLV GLC A + +++G G G GL
Sbjct: 308 GYCEKQEVERALDVFEEMIDCGLKPTSITYNTLVQGLCEAKRFDRIKEILEGTLGSG-GL 366
Query: 184 KPNVVTYTTLMRGYCEKQSIADALAVFEEL 95
P+ T+ TL+ +C ++ +A+ VFE +
Sbjct: 367 IPDTCTFNTLITFHCNVGNLDEAVKVFENM 396
Score = 62.0 bits (149), Expect = 9e-08
Identities = 40/156 (25%), Positives = 66/156 (42%), Gaps = 6/156 (3%)
Frame = -3
Query: 544 SIKVFTTMKSIGVRPSVITFXXXXXXXXXXXRTKMVKKVF-AEMPSTGISPDVFTFNILI 368
++ VF M G++P+ IT+ R +K++ + S G+ PD TFN LI
Sbjct: 318 ALDVFEEMIDCGLKPTSITYNTLVQGLCEAKRFDRIKEILEGTLGSGGLIPDTCTFNTLI 377
Query: 367 RGFCLNSMVDDGFRFFKEMSRFQIHPDVVTYNTLVNGLCRAGKVKTASNLVKGMCGK--- 197
C +D+ + F+ M ++ PD TY+ L+ C+ G A L + K
Sbjct: 378 TFHCNVGNLDEAVKVFENMLYLKVKPDSATYSILIRSFCQKGYFDRAEKLFDDLMKKEIL 437
Query: 196 --GSGLKPNVVTYTTLMRGYCEKQSIADALAVFEEL 95
G P + Y + +C+ A VF +L
Sbjct: 438 LRDDGCTPLIAAYNPMFEYFCKIGKTKKAEKVFRQL 473
>ref|XP_007052225.1| Tetratricopeptide repeat (TPR)-like superfamily protein, putative
[Theobroma cacao] gi|508704486|gb|EOX96382.1|
Tetratricopeptide repeat (TPR)-like superfamily protein,
putative [Theobroma cacao]
Length = 724
Score = 195 bits (496), Expect(2) = 1e-52
Identities = 101/153 (66%), Positives = 116/153 (75%), Gaps = 1/153 (0%)
Frame = -3
Query: 550 Q*SIKVFTTMKSIGVRPSVITFXXXXXXXXXXXRTKMVKKVFAEMPST-GISPDVFTFNI 374
Q SIKVF TMK IGV PSV++F RT M K VF EM ST G+SPDV+TFNI
Sbjct: 177 QESIKVFETMKGIGVSPSVVSFNNLLMILLKRGRTNMAKSVFDEMLSTYGVSPDVYTFNI 236
Query: 373 LIRGFCLNSMVDDGFRFFKEMSRFQIHPDVVTYNTLVNGLCRAGKVKTASNLVKGMCGKG 194
LIRGFC+NSMVD+GFRFFKEM RF+ PDVVTYNT+V+GLCRAGKV A N+V+GM K
Sbjct: 237 LIRGFCMNSMVDEGFRFFKEMERFKCDPDVVTYNTIVDGLCRAGKVGIARNVVRGMSKKS 296
Query: 193 SGLKPNVVTYTTLMRGYCEKQSIADALAVFEEL 95
L PNVVTYTTL+RGYC KQ I +AL VF+E+
Sbjct: 297 LDLNPNVVTYTTLVRGYCMKQEIDEALVVFKEM 329
Score = 37.4 bits (85), Expect(2) = 1e-52
Identities = 16/30 (53%), Positives = 23/30 (76%)
Frame = -2
Query: 98 IINCGMKQNRITYNTLVQGLCEAREFEMIK 9
+I+ ++ NRITYNTL++GL E E+E IK
Sbjct: 329 MISRRLRPNRITYNTLIKGLSEVHEYEKIK 358
Score = 77.0 bits (188), Expect(2) = 1e-12
Identities = 40/150 (26%), Positives = 76/150 (50%), Gaps = 2/150 (1%)
Frame = -3
Query: 538 KVFTTMKSIGVRPSVITFXXXXXXXXXXXRTKMVKKVFAEMP--STGISPDVFTFNILIR 365
+ F M+ P V+T+ + + + V M S ++P+V T+ L+R
Sbjct: 252 RFFKEMERFKCDPDVVTYNTIVDGLCRAGKVGIARNVVRGMSKKSLDLNPNVVTYTTLVR 311
Query: 364 GFCLNSMVDDGFRFFKEMSRFQIHPDVVTYNTLVNGLCRAGKVKTASNLVKGMCGKGSGL 185
G+C+ +D+ FKEM ++ P+ +TYNTL+ GL + + +++GM G+
Sbjct: 312 GYCMKQEIDEALVVFKEMISRRLRPNRITYNTLIKGLSEVHEYEKIKEILEGM-GEDGRF 370
Query: 184 KPNVVTYTTLMRGYCEKQSIADALAVFEEL 95
P+ T TL+ +C +++ +AL VF+ +
Sbjct: 371 VPDTCTLNTLINAHCNAENMDEALNVFKRM 400
Score = 21.6 bits (44), Expect(2) = 1e-12
Identities = 6/16 (37%), Positives = 12/16 (75%)
Frame = -2
Query: 65 TYNTLVQGLCEAREFE 18
TY+ +++ LC+ +FE
Sbjct: 411 TYSVIIRSLCQRGDFE 426
Score = 60.8 bits (146), Expect = 2e-07
Identities = 41/156 (26%), Positives = 61/156 (39%), Gaps = 6/156 (3%)
Frame = -3
Query: 544 SIKVFTTMKSIGVRPSVITFXXXXXXXXXXXRTKMVKKVFAEMPSTG-ISPDVFTFNILI 368
++ VF M S +RP+ IT+ + +K++ M G PD T N LI
Sbjct: 322 ALVVFKEMISRRLRPNRITYNTLIKGLSEVHEYEKIKEILEGMGEDGRFVPDTCTLNTLI 381
Query: 367 RGFCLNSMVDDGFRFFKEMSRFQIHPDVVTYNTLVNGLCRAGKVKTASNLVKGMCGK--- 197
C +D+ FK MS + PD TY+ ++ LC+ G + A + K
Sbjct: 382 NAHCNAENMDEALNVFKRMSELNVLPDSATYSVIIRSLCQRGDFEKAEEFFDELAEKEIL 441
Query: 196 --GSGLKPNVVTYTTLMRGYCEKQSIADALAVFEEL 95
G P V Y + C A VF +L
Sbjct: 442 LSDVGCTPLVAAYNPMFEYLCGNGKTKKAEIVFRQL 477
>ref|XP_004510607.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
chloroplastic-like [Cicer arietinum]
Length = 740
Score = 192 bits (489), Expect(2) = 4e-52
Identities = 98/151 (64%), Positives = 114/151 (75%), Gaps = 1/151 (0%)
Frame = -3
Query: 544 SIKVFTTMKSIGVRPSVITFXXXXXXXXXXXRTKMVKKVFAEMPST-GISPDVFTFNILI 368
SIK+F TMKSIGV PSVITF RT M K+VF EM ST G++PD +T+NILI
Sbjct: 178 SIKLFQTMKSIGVSPSVITFNSVLLILLRRGRTNMAKEVFDEMLSTYGVTPDTYTYNILI 237
Query: 367 RGFCLNSMVDDGFRFFKEMSRFQIHPDVVTYNTLVNGLCRAGKVKTASNLVKGMCGKGSG 188
RGFC NSMVD+GF FFKEM+ F PDVVTYNTLV+GLCRAGK+KTA NLV GM K G
Sbjct: 238 RGFCKNSMVDEGFHFFKEMTSFNCDPDVVTYNTLVDGLCRAGKIKTAHNLVNGMSKKCGG 297
Query: 187 LKPNVVTYTTLMRGYCEKQSIADALAVFEEL 95
L P+VVTYTTL+RGYC KQ + +AL + EE+
Sbjct: 298 LSPDVVTYTTLIRGYCMKQEVNEALVILEEM 328
Score = 38.1 bits (87), Expect(2) = 4e-52
Identities = 14/26 (53%), Positives = 23/26 (88%)
Frame = -2
Query: 86 GMKQNRITYNTLVQGLCEAREFEMIK 9
G+K N +TYNTL++GLCEA++++ +K
Sbjct: 332 GLKPNIVTYNTLIKGLCEAQKWDKMK 357
Score = 83.2 bits (204), Expect = 4e-14
Identities = 47/148 (31%), Positives = 75/148 (50%), Gaps = 2/148 (1%)
Frame = -3
Query: 532 FTTMKSIGVRPSVITFXXXXXXXXXXXRTKMVKKVFAEMPST--GISPDVFTFNILIRGF 359
F M S P V+T+ + K + M G+SPDV T+ LIRG+
Sbjct: 253 FKEMTSFNCDPDVVTYNTLVDGLCRAGKIKTAHNLVNGMSKKCGGLSPDVVTYTTLIRGY 312
Query: 358 CLNSMVDDGFRFFKEMSRFQIHPDVVTYNTLVNGLCRAGKVKTASNLVKGMCGKGSGLKP 179
C+ V++ +EM+ + P++VTYNTL+ GLC A K ++++ M G SG P
Sbjct: 313 CMKQEVNEALVILEEMNGRGLKPNIVTYNTLIKGLCEAQKWDKMKDILEQMKG-DSGAIP 371
Query: 178 NVVTYTTLMRGYCEKQSIADALAVFEEL 95
+ T+ TL+ +C ++ +A VFE +
Sbjct: 372 DACTFNTLINSHCCAGNLDEAFKVFENM 399
Score = 65.9 bits (159), Expect(2) = 5e-09
Identities = 38/156 (24%), Positives = 68/156 (43%), Gaps = 6/156 (3%)
Frame = -3
Query: 544 SIKVFTTMKSIGVRPSVITFXXXXXXXXXXXRTKMVKKVFAEMPS-TGISPDVFTFNILI 368
++ + M G++P+++T+ + +K + +M +G PD TFN LI
Sbjct: 321 ALVILEEMNGRGLKPNIVTYNTLIKGLCEAQKWDKMKDILEQMKGDSGAIPDACTFNTLI 380
Query: 367 RGFCLNSMVDDGFRFFKEMSRFQIHPDVVTYNTLVNGLCRAGKVKTASNLVKGMCG---- 200
C +D+ F+ F+ M + Q+ D +Y+ L+ LC+ G A L +
Sbjct: 381 NSHCCAGNLDEAFKVFENMKKLQVSADSASYSVLIRSLCQIGNYDKAEMLFDELFENEIL 440
Query: 199 -KGSGLKPNVVTYTTLMRGYCEKQSIADALAVFEEL 95
+ SG KP +Y + + CE A V +L
Sbjct: 441 LRSSGPKPLAASYKRIFQYLCEHGKTKKAERVLRQL 476
Score = 20.4 bits (41), Expect(2) = 5e-09
Identities = 7/20 (35%), Positives = 13/20 (65%)
Frame = -2
Query: 77 QNRITYNTLVQGLCEAREFE 18
Q+ ++Y T++ G C+ FE
Sbjct: 482 QDPLSYKTVILGHCKEGAFE 501
>ref|XP_006375239.1| hypothetical protein POPTR_0014s05550g [Populus trichocarpa]
gi|550323558|gb|ERP53036.1| hypothetical protein
POPTR_0014s05550g [Populus trichocarpa]
Length = 728
Score = 188 bits (478), Expect(2) = 9e-52
Identities = 98/151 (64%), Positives = 112/151 (74%), Gaps = 1/151 (0%)
Frame = -3
Query: 544 SIKVFTTMKSIGVRPSVITFXXXXXXXXXXXRTKMVKKVFAEMPST-GISPDVFTFNILI 368
+IK+F+ MKS GV PSVITF RT M VF EM T G++PD +TFNILI
Sbjct: 180 AIKLFSLMKSSGVSPSVITFNSLLLILLKRGRTNMAHSVFDEMCGTYGVTPDTYTFNILI 239
Query: 367 RGFCLNSMVDDGFRFFKEMSRFQIHPDVVTYNTLVNGLCRAGKVKTASNLVKGMCGKGSG 188
RGFC NSMVD+GFRFFKEMSRF PDVVTYNTLV+GLCRAGKV+ A N+VKGM K
Sbjct: 240 RGFCKNSMVDEGFRFFKEMSRFNCEPDVVTYNTLVDGLCRAGKVRIAHNVVKGMVKKMKD 299
Query: 187 LKPNVVTYTTLMRGYCEKQSIADALAVFEEL 95
L P+VVTYTTL+RGYC KQ I +AL VFEE+
Sbjct: 300 LSPDVVTYTTLVRGYCMKQEIDEALVVFEEM 330
Score = 41.2 bits (95), Expect(2) = 9e-52
Identities = 16/30 (53%), Positives = 25/30 (83%)
Frame = -2
Query: 98 IINCGMKQNRITYNTLVQGLCEAREFEMIK 9
+++ G+K N ITYNTL++GLCE ++F+ IK
Sbjct: 330 MVSRGLKPNDITYNTLIKGLCEVQKFDKIK 359
Score = 84.3 bits (207), Expect(2) = 5e-15
Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 2/150 (1%)
Frame = -3
Query: 538 KVFTTMKSIGVRPSVITFXXXXXXXXXXXRTKMVKKVFAEMPST--GISPDVFTFNILIR 365
+ F M P V+T+ + ++ V M +SPDV T+ L+R
Sbjct: 253 RFFKEMSRFNCEPDVVTYNTLVDGLCRAGKVRIAHNVVKGMVKKMKDLSPDVVTYTTLVR 312
Query: 364 GFCLNSMVDDGFRFFKEMSRFQIHPDVVTYNTLVNGLCRAGKVKTASNLVKGMCGKGSGL 185
G+C+ +D+ F+EM + P+ +TYNTL+ GLC K ++ G G G G
Sbjct: 313 GYCMKQEIDEALVVFEEMVSRGLKPNDITYNTLIKGLCEVQKFDKIKEILGGAVG-GRGF 371
Query: 184 KPNVVTYTTLMRGYCEKQSIADALAVFEEL 95
P+ TY TLM C+ + +AL +F+++
Sbjct: 372 VPDTCTYNTLMNAQCDAGNFDEALKMFKKM 401
Score = 22.3 bits (46), Expect(2) = 5e-15
Identities = 7/16 (43%), Positives = 12/16 (75%)
Frame = -2
Query: 65 TYNTLVQGLCEAREFE 18
TY+ L++ LC+ +FE
Sbjct: 412 TYSVLIRNLCQRGDFE 427
Score = 63.2 bits (152), Expect = 4e-08
Identities = 39/156 (25%), Positives = 66/156 (42%), Gaps = 6/156 (3%)
Frame = -3
Query: 544 SIKVFTTMKSIGVRPSVITFXXXXXXXXXXXRTKMVKKVFA-EMPSTGISPDVFTFNILI 368
++ VF M S G++P+ IT+ + +K++ + G PD T+N L+
Sbjct: 323 ALVVFEEMVSRGLKPNDITYNTLIKGLCEVQKFDKIKEILGGAVGGRGFVPDTCTYNTLM 382
Query: 367 RGFCLNSMVDDGFRFFKEMSRFQIHPDVVTYNTLVNGLCRAGKVKTASNLVKGMCG---- 200
C D+ + FK+M ++ PD TY+ L+ LC+ G + A L +
Sbjct: 383 NAQCDAGNFDEALKMFKKMKELKVQPDSATYSVLIRNLCQRGDFERAEQLFDKLSDEDIL 442
Query: 199 -KGSGLKPNVVTYTTLMRGYCEKQSIADALAVFEEL 95
+ G P V Y + C+ A VF +L
Sbjct: 443 LRDDGCTPLVAAYNPIFDFLCKNGKTHKAERVFRQL 478
Score = 54.3 bits (129), Expect(2) = 2e-07
Identities = 25/95 (26%), Positives = 50/95 (52%)
Frame = -3
Query: 379 NILIRGFCLNSMVDDGFRFFKEMSRFQIHPDVVTYNTLVNGLCRAGKVKTASNLVKGMCG 200
N L+R + + ++ + F M + P V+T+N+L+ L + G+ A ++ MCG
Sbjct: 165 NTLLRSYGNAGLFNEAIKLFSLMKSSGVSPSVITFNSLLLILLKRGRTNMAHSVFDEMCG 224
Query: 199 KGSGLKPNVVTYTTLMRGYCEKQSIADALAVFEEL 95
G+ P+ T+ L+RG+C+ + + F+E+
Sbjct: 225 T-YGVTPDTYTFNILIRGFCKNSMVDEGFRFFKEM 258
Score = 26.6 bits (57), Expect(2) = 2e-07
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = -2
Query: 68 ITYNTLVQGLCEA 30
+TYNTLV GLC A
Sbjct: 268 VTYNTLVDGLCRA 280
>ref|XP_004235443.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
chloroplastic-like [Solanum lycopersicum]
Length = 710
Score = 185 bits (469), Expect(2) = 3e-51
Identities = 93/153 (60%), Positives = 114/153 (74%), Gaps = 1/153 (0%)
Frame = -3
Query: 550 Q*SIKVFTTMKSIGVRPSVITFXXXXXXXXXXXRTKMVKKVFAEMPST-GISPDVFTFNI 374
Q S+KVF MKS+G+ PSV+TF RT MV ++F EM T G PDV+TFNI
Sbjct: 167 QESLKVFKVMKSLGISPSVVTFNSLFTILLKRGRTGMVYELFDEMLKTFGAKPDVYTFNI 226
Query: 373 LIRGFCLNSMVDDGFRFFKEMSRFQIHPDVVTYNTLVNGLCRAGKVKTASNLVKGMCGKG 194
LIRGFC+NSMVD GFRFFKEM R + P+V+TYNT+V+GLCRAGKV+ A N++KGM +G
Sbjct: 227 LIRGFCINSMVDKGFRFFKEMERHECEPNVITYNTIVDGLCRAGKVEIAHNVLKGMAKRG 286
Query: 193 SGLKPNVVTYTTLMRGYCEKQSIADALAVFEEL 95
L PNVV+YTTL+RGYCEKQ + AL VFEE+
Sbjct: 287 HQLSPNVVSYTTLVRGYCEKQEVERALDVFEEM 319
Score = 43.1 bits (100), Expect(2) = 3e-51
Identities = 19/30 (63%), Positives = 24/30 (80%)
Frame = -2
Query: 98 IINCGMKQNRITYNTLVQGLCEAREFEMIK 9
+I+ G+K ITYNTLVQGLCEA+ F+ IK
Sbjct: 319 MIDRGLKPTSITYNTLVQGLCEAKRFDRIK 348
Score = 79.0 bits (193), Expect = 7e-13
Identities = 45/150 (30%), Positives = 75/150 (50%), Gaps = 2/150 (1%)
Frame = -3
Query: 538 KVFTTMKSIGVRPSVITFXXXXXXXXXXXRTKMVKKVFAEMPSTG--ISPDVFTFNILIR 365
+ F M+ P+VIT+ + ++ V M G +SP+V ++ L+R
Sbjct: 242 RFFKEMERHECEPNVITYNTIVDGLCRAGKVEIAHNVLKGMAKRGHQLSPNVVSYTTLVR 301
Query: 364 GFCLNSMVDDGFRFFKEMSRFQIHPDVVTYNTLVNGLCRAGKVKTASNLVKGMCGKGSGL 185
G+C V+ F+EM + P +TYNTLV GLC A + +++G G G GL
Sbjct: 302 GYCEKQEVERALDVFEEMIDRGLKPTSITYNTLVQGLCEAKRFDRIKEILEGTLGSG-GL 360
Query: 184 KPNVVTYTTLMRGYCEKQSIADALAVFEEL 95
P+ T+ TL+ +C ++ +A+ VFE +
Sbjct: 361 IPDTCTFNTLITYHCNVGNLDEAVKVFENM 390
Score = 61.2 bits (147), Expect = 2e-07
Identities = 40/156 (25%), Positives = 66/156 (42%), Gaps = 6/156 (3%)
Frame = -3
Query: 544 SIKVFTTMKSIGVRPSVITFXXXXXXXXXXXRTKMVKKVF-AEMPSTGISPDVFTFNILI 368
++ VF M G++P+ IT+ R +K++ + S G+ PD TFN LI
Sbjct: 312 ALDVFEEMIDRGLKPTSITYNTLVQGLCEAKRFDRIKEILEGTLGSGGLIPDTCTFNTLI 371
Query: 367 RGFCLNSMVDDGFRFFKEMSRFQIHPDVVTYNTLVNGLCRAGKVKTASNLVKGMCGK--- 197
C +D+ + F+ M ++ PD TY+ L+ C+ G A L + K
Sbjct: 372 TYHCNVGNLDEAVKVFENMLYLKVKPDSATYSILIRSFCQKGYFDRAEKLFDDLMKKEVL 431
Query: 196 --GSGLKPNVVTYTTLMRGYCEKQSIADALAVFEEL 95
G P + Y + +C+ A VF +L
Sbjct: 432 LRDDGCTPLIAAYNPMFEYFCKIGKTKKAEKVFRQL 467
Score = 58.5 bits (140), Expect = 1e-06
Identities = 37/144 (25%), Positives = 62/144 (43%), Gaps = 7/144 (4%)
Frame = -3
Query: 526 TMKSIGVRPSVITFXXXXXXXXXXXRTKMVKKVFAEMPSTGISPDVFTFNILIRGFCLNS 347
T+ S G+ P TF KVF M + PD T++ILIR FC
Sbjct: 354 TLGSGGLIPDTCTFNTLITYHCNVGNLDEAVKVFENMLYLKVKPDSATYSILIRSFCQKG 413
Query: 346 MVDDGFRFFKEMSRFQI-------HPDVVTYNTLVNGLCRAGKVKTASNLVKGMCGKGSG 188
D + F ++ + ++ P + YN + C+ GK K A + + + +G+
Sbjct: 414 YFDRAEKLFDDLMKKEVLLRDDGCTPLIAAYNPMFEYFCKIGKTKKAEKVFRQLMRRGT- 472
Query: 187 LKPNVVTYTTLMRGYCEKQSIADA 116
+ Y L+RG+C++ + DA
Sbjct: 473 --QDPFAYELLIRGHCKEGTFNDA 494
>ref|XP_007219156.1| hypothetical protein PRUPE_ppa016282mg, partial [Prunus persica]
gi|462415618|gb|EMJ20355.1| hypothetical protein
PRUPE_ppa016282mg, partial [Prunus persica]
Length = 721
Score = 186 bits (471), Expect(2) = 5e-50
Identities = 93/153 (60%), Positives = 115/153 (75%), Gaps = 1/153 (0%)
Frame = -3
Query: 550 Q*SIKVFTTMKSIGVRPSVITFXXXXXXXXXXXRTKMVKKVFAEMPST-GISPDVFTFNI 374
Q SIK+FTTMKS+GV PSV++F RT M K V+ EM S G++PD +TFNI
Sbjct: 165 QESIKLFTTMKSLGVSPSVVSFNSLLSILLKKGRTNMAKNVYDEMLSMYGVTPDTYTFNI 224
Query: 373 LIRGFCLNSMVDDGFRFFKEMSRFQIHPDVVTYNTLVNGLCRAGKVKTASNLVKGMCGKG 194
LIRGFC+NSMVD+G+RFFK+MS F+ PDV+TYNTLV+GLCRAGKV+ A N+V GM +
Sbjct: 225 LIRGFCMNSMVDEGYRFFKDMSGFRCDPDVITYNTLVDGLCRAGKVEIAHNVVNGMSKRS 284
Query: 193 SGLKPNVVTYTTLMRGYCEKQSIADALAVFEEL 95
L PNVVTYTTL+RGYC KQ I AL++ EE+
Sbjct: 285 GDLTPNVVTYTTLIRGYCVKQEIDKALSILEEM 317
Score = 38.1 bits (87), Expect(2) = 5e-50
Identities = 15/26 (57%), Positives = 21/26 (80%)
Frame = -2
Query: 86 GMKQNRITYNTLVQGLCEAREFEMIK 9
G+K N TYNTL++GLCEA++ + IK
Sbjct: 321 GLKPNGFTYNTLIKGLCEAQKLDKIK 346
Score = 75.5 bits (184), Expect = 8e-12
Identities = 43/150 (28%), Positives = 71/150 (47%), Gaps = 2/150 (1%)
Frame = -3
Query: 538 KVFTTMKSIGVRPSVITFXXXXXXXXXXXRTKMVKKVFAEMP--STGISPDVFTFNILIR 365
+ F M P VIT+ + ++ V M S ++P+V T+ LIR
Sbjct: 240 RFFKDMSGFRCDPDVITYNTLVDGLCRAGKVEIAHNVVNGMSKRSGDLTPNVVTYTTLIR 299
Query: 364 GFCLNSMVDDGFRFFKEMSRFQIHPDVVTYNTLVNGLCRAGKVKTASNLVKGMCGKGSGL 185
G+C+ +D +EM+ + P+ TYNTL+ GLC A K+ + +G G
Sbjct: 300 GYCVKQEIDKALSILEEMTTRGLKPNGFTYNTLIKGLCEAQKLDKIKEIFEGTM-IGGEF 358
Query: 184 KPNVVTYTTLMRGYCEKQSIADALAVFEEL 95
P+ T+ TLM +C ++ +AL VF ++
Sbjct: 359 TPDTCTFNTLMHSHCNAGNLDEALKVFAKM 388
Score = 59.3 bits (142), Expect(2) = 2e-07
Identities = 38/156 (24%), Positives = 66/156 (42%), Gaps = 6/156 (3%)
Frame = -3
Query: 544 SIKVFTTMKSIGVRPSVITFXXXXXXXXXXXRTKMVKKVF-AEMPSTGISPDVFTFNILI 368
++ + M + G++P+ T+ + +K++F M +PD TFN L+
Sbjct: 310 ALSILEEMTTRGLKPNGFTYNTLIKGLCEAQKLDKIKEIFEGTMIGGEFTPDTCTFNTLM 369
Query: 367 RGFCLNSMVDDGFRFFKEMSRFQIHPDVVTYNTLVNGLCRAGKVKTASNLV-----KGMC 203
C +D+ + F +MS ++ PD TY+ L+ LC+ G A L K +
Sbjct: 370 HSHCNAGNLDEALKVFAKMSELKVPPDSATYSVLICSLCQRGDYPRAEELFDELSKKEIL 429
Query: 202 GKGSGLKPNVVTYTTLMRGYCEKQSIADALAVFEEL 95
+ G KP V +Y + A VF +L
Sbjct: 430 LRDDGCKPLVASYNPIFGYLSSNGKTQKAEEVFRQL 465
Score = 21.2 bits (43), Expect(2) = 2e-07
Identities = 7/20 (35%), Positives = 13/20 (65%)
Frame = -2
Query: 77 QNRITYNTLVQGLCEAREFE 18
Q+ ++Y TL+ G C+ +E
Sbjct: 471 QDPLSYKTLIMGNCKEGTYE 490
>gb|EXB97272.1| hypothetical protein L484_024133 [Morus notabilis]
Length = 786
Score = 186 bits (471), Expect(2) = 8e-50
Identities = 92/153 (60%), Positives = 112/153 (73%), Gaps = 1/153 (0%)
Frame = -3
Query: 550 Q*SIKVFTTMKSIGVRPSVITFXXXXXXXXXXXRTKMVKKVFAEMPST-GISPDVFTFNI 374
Q S+K+F+TMK + + PSV+TF RT M + VF EM T G+ PD FTFN+
Sbjct: 225 QESVKLFSTMKELAIAPSVVTFNSLLLVLLKRGRTNMARNVFDEMLGTYGVEPDTFTFNV 284
Query: 373 LIRGFCLNSMVDDGFRFFKEMSRFQIHPDVVTYNTLVNGLCRAGKVKTASNLVKGMCGKG 194
LIRGFC+NSMVD+GF FFKEMSRF+ PDVVTYNTLV+GLCRAGKV A N+VKGM K
Sbjct: 285 LIRGFCMNSMVDEGFHFFKEMSRFKCEPDVVTYNTLVDGLCRAGKVDIARNVVKGMSKKS 344
Query: 193 SGLKPNVVTYTTLMRGYCEKQSIADALAVFEEL 95
L PN+VTYTTL++GYC KQ I +AL V +E+
Sbjct: 345 VDLNPNIVTYTTLIKGYCGKQEIDEALLVLKEM 377
Score = 37.4 bits (85), Expect(2) = 8e-50
Identities = 14/26 (53%), Positives = 22/26 (84%)
Frame = -2
Query: 86 GMKQNRITYNTLVQGLCEAREFEMIK 9
G+K N ITYNTL++GLCEA++ + ++
Sbjct: 381 GLKPNGITYNTLIKGLCEAQKLDDVR 406
Score = 80.5 bits (197), Expect(2) = 2e-13
Identities = 42/148 (28%), Positives = 73/148 (49%), Gaps = 2/148 (1%)
Frame = -3
Query: 532 FTTMKSIGVRPSVITFXXXXXXXXXXXRTKMVKKVFAEMP--STGISPDVFTFNILIRGF 359
F M P V+T+ + + + V M S ++P++ T+ LI+G+
Sbjct: 302 FKEMSRFKCEPDVVTYNTLVDGLCRAGKVDIARNVVKGMSKKSVDLNPNIVTYTTLIKGY 361
Query: 358 CLNSMVDDGFRFFKEMSRFQIHPDVVTYNTLVNGLCRAGKVKTASNLVKGMCGKGSGLKP 179
C +D+ KEM+ + P+ +TYNTL+ GLC A K+ ++ G +G P
Sbjct: 362 CGKQEIDEALLVLKEMTERGLKPNGITYNTLIKGLCEAQKLDDVRKILDGTMRRGE-FVP 420
Query: 178 NVVTYTTLMRGYCEKQSIADALAVFEEL 95
N T+ TL+ +C+ + +AL VFE++
Sbjct: 421 NTCTFNTLIHTHCQAGRLDEALKVFEKM 448
Score = 20.8 bits (42), Expect(2) = 2e-13
Identities = 6/19 (31%), Positives = 13/19 (68%)
Frame = -2
Query: 77 QNRITYNTLVQGLCEAREF 21
Q+ TY+ L++ LC+ ++
Sbjct: 455 QDSATYSALIRSLCQRGDY 473
Score = 57.0 bits (136), Expect(2) = 2e-08
Identities = 29/96 (30%), Positives = 49/96 (51%)
Frame = -3
Query: 382 FNILIRGFCLNSMVDDGFRFFKEMSRFQIHPDVVTYNTLVNGLCRAGKVKTASNLVKGMC 203
FN LIR + + + + F M I P VVT+N+L+ L + G+ A N+ M
Sbjct: 211 FNSLIRSYGNAGLFQESVKLFSTMKELAIAPSVVTFNSLLLVLLKRGRTNMARNVFDEML 270
Query: 202 GKGSGLKPNVVTYTTLMRGYCEKQSIADALAVFEEL 95
G G++P+ T+ L+RG+C + + F+E+
Sbjct: 271 GT-YGVEPDTFTFNVLIRGFCMNSMVDEGFHFFKEM 305
Score = 27.3 bits (59), Expect(2) = 2e-08
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = -2
Query: 68 ITYNTLVQGLCEAREFEMIK 9
+TYNTLV GLC A + ++ +
Sbjct: 315 VTYNTLVDGLCRAGKVDIAR 334
Score = 56.6 bits (135), Expect = 4e-06
Identities = 39/156 (25%), Positives = 62/156 (39%), Gaps = 6/156 (3%)
Frame = -3
Query: 544 SIKVFTTMKSIGVRPSVITFXXXXXXXXXXXRTKMVKKVFAEMPSTG-ISPDVFTFNILI 368
++ V M G++P+ IT+ + V+K+ G P+ TFN LI
Sbjct: 370 ALLVLKEMTERGLKPNGITYNTLIKGLCEAQKLDDVRKILDGTMRRGEFVPNTCTFNTLI 429
Query: 367 RGFCLNSMVDDGFRFFKEMSRFQIHPDVVTYNTLVNGLCRAGKVKTASNLVKGMCGK--- 197
C +D+ + F++M Q+ D TY+ L+ LC+ G A L + K
Sbjct: 430 HTHCQAGRLDEALKVFEKMLELQVLQDSATYSALIRSLCQRGDYIRAEELFDKLSDKEIL 489
Query: 196 --GSGLKPNVVTYTTLMRGYCEKQSIADALAVFEEL 95
G +P V Y + C A VF +L
Sbjct: 490 LSDDGCRPIVAAYNPMFEHLCRNGKTKKAERVFRQL 525
>ref|XP_006592805.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
chloroplastic-like isoform X2 [Glycine max]
Length = 743
Score = 181 bits (459), Expect(2) = 7e-49
Identities = 93/151 (61%), Positives = 109/151 (72%), Gaps = 1/151 (0%)
Frame = -3
Query: 544 SIKVFTTMKSIGVRPSVITFXXXXXXXXXXXRTKMVKKVFAEMPST-GISPDVFTFNILI 368
S+K+F TMKSI V PSV+TF RT M K+V+ EM T G+SPD T+N+LI
Sbjct: 169 SMKLFQTMKSIAVSPSVVTFNSLMSILLKRGRTNMAKEVYDEMLGTYGVSPDTCTYNVLI 228
Query: 367 RGFCLNSMVDDGFRFFKEMSRFQIHPDVVTYNTLVNGLCRAGKVKTASNLVKGMCGKGSG 188
RGFC NSMVD+GFRFF+EM F DVVTYNTLV+GLCRAGKV+ A NLV GM K G
Sbjct: 229 RGFCKNSMVDEGFRFFREMESFNCDADVVTYNTLVDGLCRAGKVRIARNLVNGMGKKCEG 288
Query: 187 LKPNVVTYTTLMRGYCEKQSIADALAVFEEL 95
L PNVVTYTTL+RGYC KQ + +AL V EE+
Sbjct: 289 LNPNVVTYTTLIRGYCMKQEVEEALVVLEEM 319
Score = 38.9 bits (89), Expect(2) = 7e-49
Identities = 16/26 (61%), Positives = 21/26 (80%)
Frame = -2
Query: 86 GMKQNRITYNTLVQGLCEAREFEMIK 9
G+K N ITYNTLV+GLCEA + + +K
Sbjct: 323 GLKPNMITYNTLVKGLCEAHKLDKMK 348
Score = 79.0 bits (193), Expect(2) = 1e-13
Identities = 42/150 (28%), Positives = 79/150 (52%), Gaps = 2/150 (1%)
Frame = -3
Query: 538 KVFTTMKSIGVRPSVITFXXXXXXXXXXXRTKMVKKVFAEMPST--GISPDVFTFNILIR 365
+ F M+S V+T+ + ++ + + M G++P+V T+ LIR
Sbjct: 242 RFFREMESFNCDADVVTYNTLVDGLCRAGKVRIARNLVNGMGKKCEGLNPNVVTYTTLIR 301
Query: 364 GFCLNSMVDDGFRFFKEMSRFQIHPDVVTYNTLVNGLCRAGKVKTASNLVKGMCGKGSGL 185
G+C+ V++ +EM+ + P+++TYNTLV GLC A K+ ++++ M G G
Sbjct: 302 GYCMKQEVEEALVVLEEMTSRGLKPNMITYNTLVKGLCEAHKLDKMKDVLERMKSDG-GF 360
Query: 184 KPNVVTYTTLMRGYCEKQSIADALAVFEEL 95
P+ T+ T++ +C ++ +AL VFE +
Sbjct: 361 SPDTFTFNTIIHLHCCAGNLDEALKVFESM 390
Score = 22.7 bits (47), Expect(2) = 1e-13
Identities = 10/28 (35%), Positives = 19/28 (67%), Gaps = 5/28 (17%)
Frame = -2
Query: 83 MKQNRI-----TYNTLVQGLCEAREFEM 15
MK+ RI +Y+TL++ LC+ +++M
Sbjct: 390 MKKFRIPADSASYSTLIRSLCQKGDYDM 417
Score = 72.0 bits (175), Expect = 9e-11
Identities = 48/168 (28%), Positives = 74/168 (44%), Gaps = 6/168 (3%)
Frame = -3
Query: 544 SIKVFTTMKSIGVRPSVITFXXXXXXXXXXXRTKMVKKVFAEMPSTG-ISPDVFTFNILI 368
++ V M S G++P++IT+ + +K V M S G SPD FTFN +I
Sbjct: 312 ALVVLEEMTSRGLKPNMITYNTLVKGLCEAHKLDKMKDVLERMKSDGGFSPDTFTFNTII 371
Query: 367 RGFCLNSMVDDGFRFFKEMSRFQIHPDVVTYNTLVNGLCRAGKVKTASNLVKGMCGK--- 197
C +D+ + F+ M +F+I D +Y+TL+ LC+ G A L + K
Sbjct: 372 HLHCCAGNLDEALKVFESMKKFRIPADSASYSTLIRSLCQKGDYDMAEQLFDELFEKEIL 431
Query: 196 --GSGLKPNVVTYTTLMRGYCEKQSIADALAVFEEL*IVG*NKIESHT 59
G KP +Y + CE A V +L G +S+T
Sbjct: 432 LSKFGSKPLAASYNPIFESLCEHGKTKKAERVIRQLMKRGTQDPQSYT 479
Score = 59.7 bits (143), Expect(2) = 3e-09
Identities = 28/96 (29%), Positives = 49/96 (51%)
Frame = -3
Query: 382 FNILIRGFCLNSMVDDGFRFFKEMSRFQIHPDVVTYNTLVNGLCRAGKVKTASNLVKGMC 203
FN LIR + + + + F+ M + P VVT+N+L++ L + G+ A + M
Sbjct: 153 FNSLIRSYAEAGLFKESMKLFQTMKSIAVSPSVVTFNSLMSILLKRGRTNMAKEVYDEML 212
Query: 202 GKGSGLKPNVVTYTTLMRGYCEKQSIADALAVFEEL 95
G G+ P+ TY L+RG+C+ + + F E+
Sbjct: 213 GT-YGVSPDTCTYNVLIRGFCKNSMVDEGFRFFREM 247
Score = 27.3 bits (59), Expect(2) = 3e-09
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = -2
Query: 86 GMKQNRITYNTLVQGLCEAREFE 18
G+ N +TY TL++G C +E E
Sbjct: 288 GLNPNVVTYTTLIRGYCMKQEVE 310
>ref|XP_003539494.2| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
chloroplastic-like isoform X1 [Glycine max]
Length = 741
Score = 181 bits (459), Expect(2) = 7e-49
Identities = 93/151 (61%), Positives = 109/151 (72%), Gaps = 1/151 (0%)
Frame = -3
Query: 544 SIKVFTTMKSIGVRPSVITFXXXXXXXXXXXRTKMVKKVFAEMPST-GISPDVFTFNILI 368
S+K+F TMKSI V PSV+TF RT M K+V+ EM T G+SPD T+N+LI
Sbjct: 167 SMKLFQTMKSIAVSPSVVTFNSLMSILLKRGRTNMAKEVYDEMLGTYGVSPDTCTYNVLI 226
Query: 367 RGFCLNSMVDDGFRFFKEMSRFQIHPDVVTYNTLVNGLCRAGKVKTASNLVKGMCGKGSG 188
RGFC NSMVD+GFRFF+EM F DVVTYNTLV+GLCRAGKV+ A NLV GM K G
Sbjct: 227 RGFCKNSMVDEGFRFFREMESFNCDADVVTYNTLVDGLCRAGKVRIARNLVNGMGKKCEG 286
Query: 187 LKPNVVTYTTLMRGYCEKQSIADALAVFEEL 95
L PNVVTYTTL+RGYC KQ + +AL V EE+
Sbjct: 287 LNPNVVTYTTLIRGYCMKQEVEEALVVLEEM 317
Score = 38.9 bits (89), Expect(2) = 7e-49
Identities = 16/26 (61%), Positives = 21/26 (80%)
Frame = -2
Query: 86 GMKQNRITYNTLVQGLCEAREFEMIK 9
G+K N ITYNTLV+GLCEA + + +K
Sbjct: 321 GLKPNMITYNTLVKGLCEAHKLDKMK 346
Score = 79.0 bits (193), Expect(2) = 1e-13
Identities = 42/150 (28%), Positives = 79/150 (52%), Gaps = 2/150 (1%)
Frame = -3
Query: 538 KVFTTMKSIGVRPSVITFXXXXXXXXXXXRTKMVKKVFAEMPST--GISPDVFTFNILIR 365
+ F M+S V+T+ + ++ + + M G++P+V T+ LIR
Sbjct: 240 RFFREMESFNCDADVVTYNTLVDGLCRAGKVRIARNLVNGMGKKCEGLNPNVVTYTTLIR 299
Query: 364 GFCLNSMVDDGFRFFKEMSRFQIHPDVVTYNTLVNGLCRAGKVKTASNLVKGMCGKGSGL 185
G+C+ V++ +EM+ + P+++TYNTLV GLC A K+ ++++ M G G
Sbjct: 300 GYCMKQEVEEALVVLEEMTSRGLKPNMITYNTLVKGLCEAHKLDKMKDVLERMKSDG-GF 358
Query: 184 KPNVVTYTTLMRGYCEKQSIADALAVFEEL 95
P+ T+ T++ +C ++ +AL VFE +
Sbjct: 359 SPDTFTFNTIIHLHCCAGNLDEALKVFESM 388
Score = 22.7 bits (47), Expect(2) = 1e-13
Identities = 10/28 (35%), Positives = 19/28 (67%), Gaps = 5/28 (17%)
Frame = -2
Query: 83 MKQNRI-----TYNTLVQGLCEAREFEM 15
MK+ RI +Y+TL++ LC+ +++M
Sbjct: 388 MKKFRIPADSASYSTLIRSLCQKGDYDM 415
Score = 72.0 bits (175), Expect = 9e-11
Identities = 48/168 (28%), Positives = 74/168 (44%), Gaps = 6/168 (3%)
Frame = -3
Query: 544 SIKVFTTMKSIGVRPSVITFXXXXXXXXXXXRTKMVKKVFAEMPSTG-ISPDVFTFNILI 368
++ V M S G++P++IT+ + +K V M S G SPD FTFN +I
Sbjct: 310 ALVVLEEMTSRGLKPNMITYNTLVKGLCEAHKLDKMKDVLERMKSDGGFSPDTFTFNTII 369
Query: 367 RGFCLNSMVDDGFRFFKEMSRFQIHPDVVTYNTLVNGLCRAGKVKTASNLVKGMCGK--- 197
C +D+ + F+ M +F+I D +Y+TL+ LC+ G A L + K
Sbjct: 370 HLHCCAGNLDEALKVFESMKKFRIPADSASYSTLIRSLCQKGDYDMAEQLFDELFEKEIL 429
Query: 196 --GSGLKPNVVTYTTLMRGYCEKQSIADALAVFEEL*IVG*NKIESHT 59
G KP +Y + CE A V +L G +S+T
Sbjct: 430 LSKFGSKPLAASYNPIFESLCEHGKTKKAERVIRQLMKRGTQDPQSYT 477
Score = 59.7 bits (143), Expect(2) = 3e-09
Identities = 28/96 (29%), Positives = 49/96 (51%)
Frame = -3
Query: 382 FNILIRGFCLNSMVDDGFRFFKEMSRFQIHPDVVTYNTLVNGLCRAGKVKTASNLVKGMC 203
FN LIR + + + + F+ M + P VVT+N+L++ L + G+ A + M
Sbjct: 151 FNSLIRSYAEAGLFKESMKLFQTMKSIAVSPSVVTFNSLMSILLKRGRTNMAKEVYDEML 210
Query: 202 GKGSGLKPNVVTYTTLMRGYCEKQSIADALAVFEEL 95
G G+ P+ TY L+RG+C+ + + F E+
Sbjct: 211 GT-YGVSPDTCTYNVLIRGFCKNSMVDEGFRFFREM 245
Score = 27.3 bits (59), Expect(2) = 3e-09
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = -2
Query: 86 GMKQNRITYNTLVQGLCEAREFE 18
G+ N +TY TL++G C +E E
Sbjct: 286 GLNPNVVTYTTLIRGYCMKQEVE 308
>ref|XP_006592806.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
chloroplastic-like isoform X3 [Glycine max]
Length = 734
Score = 181 bits (459), Expect(2) = 7e-49
Identities = 93/151 (61%), Positives = 109/151 (72%), Gaps = 1/151 (0%)
Frame = -3
Query: 544 SIKVFTTMKSIGVRPSVITFXXXXXXXXXXXRTKMVKKVFAEMPST-GISPDVFTFNILI 368
S+K+F TMKSI V PSV+TF RT M K+V+ EM T G+SPD T+N+LI
Sbjct: 169 SMKLFQTMKSIAVSPSVVTFNSLMSILLKRGRTNMAKEVYDEMLGTYGVSPDTCTYNVLI 228
Query: 367 RGFCLNSMVDDGFRFFKEMSRFQIHPDVVTYNTLVNGLCRAGKVKTASNLVKGMCGKGSG 188
RGFC NSMVD+GFRFF+EM F DVVTYNTLV+GLCRAGKV+ A NLV GM K G
Sbjct: 229 RGFCKNSMVDEGFRFFREMESFNCDADVVTYNTLVDGLCRAGKVRIARNLVNGMGKKCEG 288
Query: 187 LKPNVVTYTTLMRGYCEKQSIADALAVFEEL 95
L PNVVTYTTL+RGYC KQ + +AL V EE+
Sbjct: 289 LNPNVVTYTTLIRGYCMKQEVEEALVVLEEM 319
Score = 38.9 bits (89), Expect(2) = 7e-49
Identities = 16/26 (61%), Positives = 21/26 (80%)
Frame = -2
Query: 86 GMKQNRITYNTLVQGLCEAREFEMIK 9
G+K N ITYNTLV+GLCEA + + +K
Sbjct: 323 GLKPNMITYNTLVKGLCEAHKLDKMK 348
Score = 79.0 bits (193), Expect(2) = 1e-13
Identities = 42/150 (28%), Positives = 79/150 (52%), Gaps = 2/150 (1%)
Frame = -3
Query: 538 KVFTTMKSIGVRPSVITFXXXXXXXXXXXRTKMVKKVFAEMPST--GISPDVFTFNILIR 365
+ F M+S V+T+ + ++ + + M G++P+V T+ LIR
Sbjct: 242 RFFREMESFNCDADVVTYNTLVDGLCRAGKVRIARNLVNGMGKKCEGLNPNVVTYTTLIR 301
Query: 364 GFCLNSMVDDGFRFFKEMSRFQIHPDVVTYNTLVNGLCRAGKVKTASNLVKGMCGKGSGL 185
G+C+ V++ +EM+ + P+++TYNTLV GLC A K+ ++++ M G G
Sbjct: 302 GYCMKQEVEEALVVLEEMTSRGLKPNMITYNTLVKGLCEAHKLDKMKDVLERMKSDG-GF 360
Query: 184 KPNVVTYTTLMRGYCEKQSIADALAVFEEL 95
P+ T+ T++ +C ++ +AL VFE +
Sbjct: 361 SPDTFTFNTIIHLHCCAGNLDEALKVFESM 390
Score = 22.7 bits (47), Expect(2) = 1e-13
Identities = 10/28 (35%), Positives = 19/28 (67%), Gaps = 5/28 (17%)
Frame = -2
Query: 83 MKQNRI-----TYNTLVQGLCEAREFEM 15
MK+ RI +Y+TL++ LC+ +++M
Sbjct: 390 MKKFRIPADSASYSTLIRSLCQKGDYDM 417
Score = 72.0 bits (175), Expect = 9e-11
Identities = 48/168 (28%), Positives = 74/168 (44%), Gaps = 6/168 (3%)
Frame = -3
Query: 544 SIKVFTTMKSIGVRPSVITFXXXXXXXXXXXRTKMVKKVFAEMPSTG-ISPDVFTFNILI 368
++ V M S G++P++IT+ + +K V M S G SPD FTFN +I
Sbjct: 312 ALVVLEEMTSRGLKPNMITYNTLVKGLCEAHKLDKMKDVLERMKSDGGFSPDTFTFNTII 371
Query: 367 RGFCLNSMVDDGFRFFKEMSRFQIHPDVVTYNTLVNGLCRAGKVKTASNLVKGMCGK--- 197
C +D+ + F+ M +F+I D +Y+TL+ LC+ G A L + K
Sbjct: 372 HLHCCAGNLDEALKVFESMKKFRIPADSASYSTLIRSLCQKGDYDMAEQLFDELFEKEIL 431
Query: 196 --GSGLKPNVVTYTTLMRGYCEKQSIADALAVFEEL*IVG*NKIESHT 59
G KP +Y + CE A V +L G +S+T
Sbjct: 432 LSKFGSKPLAASYNPIFESLCEHGKTKKAERVIRQLMKRGTQDPQSYT 479
Score = 59.7 bits (143), Expect(2) = 3e-09
Identities = 28/96 (29%), Positives = 49/96 (51%)
Frame = -3
Query: 382 FNILIRGFCLNSMVDDGFRFFKEMSRFQIHPDVVTYNTLVNGLCRAGKVKTASNLVKGMC 203
FN LIR + + + + F+ M + P VVT+N+L++ L + G+ A + M
Sbjct: 153 FNSLIRSYAEAGLFKESMKLFQTMKSIAVSPSVVTFNSLMSILLKRGRTNMAKEVYDEML 212
Query: 202 GKGSGLKPNVVTYTTLMRGYCEKQSIADALAVFEEL 95
G G+ P+ TY L+RG+C+ + + F E+
Sbjct: 213 GT-YGVSPDTCTYNVLIRGFCKNSMVDEGFRFFREM 247
Score = 27.3 bits (59), Expect(2) = 3e-09
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = -2
Query: 86 GMKQNRITYNTLVQGLCEAREFE 18
G+ N +TY TL++G C +E E
Sbjct: 288 GLNPNVVTYTTLIRGYCMKQEVE 310
>ref|XP_003622527.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355497542|gb|AES78745.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 721
Score = 177 bits (450), Expect(2) = 1e-47
Identities = 89/151 (58%), Positives = 107/151 (70%), Gaps = 1/151 (0%)
Frame = -3
Query: 544 SIKVFTTMKSIGVRPSVITFXXXXXXXXXXXRTKMVKKVFAEMPST-GISPDVFTFNILI 368
S+K+F MK IGV P V+TF RT M K+V+ EM T G+ PD +T+NILI
Sbjct: 174 SVKLFENMKLIGVSPGVVTFNSVLLVLLKRGRTNMAKEVYDEMLKTYGVKPDTYTYNILI 233
Query: 367 RGFCLNSMVDDGFRFFKEMSRFQIHPDVVTYNTLVNGLCRAGKVKTASNLVKGMCGKGSG 188
RGFC NSMVD+GF FFKEM+ F PDVVTYNTLV+GLCRAGK+K A NLV GM K
Sbjct: 234 RGFCKNSMVDEGFYFFKEMTSFDCDPDVVTYNTLVDGLCRAGKIKVAHNLVNGMSKKCKD 293
Query: 187 LKPNVVTYTTLMRGYCEKQSIADALAVFEEL 95
L P+VVTYTTL+RGYC KQ + +AL + EE+
Sbjct: 294 LSPDVVTYTTLIRGYCRKQEVDEALDILEEM 324
Score = 38.1 bits (87), Expect(2) = 1e-47
Identities = 14/26 (53%), Positives = 23/26 (88%)
Frame = -2
Query: 86 GMKQNRITYNTLVQGLCEAREFEMIK 9
G+K N +TYNTL++GLCEA++++ +K
Sbjct: 328 GLKPNIVTYNTLIKGLCEAQKWDKMK 353
Score = 82.0 bits (201), Expect = 9e-14
Identities = 46/148 (31%), Positives = 73/148 (49%), Gaps = 2/148 (1%)
Frame = -3
Query: 532 FTTMKSIGVRPSVITFXXXXXXXXXXXRTKMVKKVFAEMPST--GISPDVFTFNILIRGF 359
F M S P V+T+ + K+ + M +SPDV T+ LIRG+
Sbjct: 249 FKEMTSFDCDPDVVTYNTLVDGLCRAGKIKVAHNLVNGMSKKCKDLSPDVVTYTTLIRGY 308
Query: 358 CLNSMVDDGFRFFKEMSRFQIHPDVVTYNTLVNGLCRAGKVKTASNLVKGMCGKGSGLKP 179
C VD+ +EM+ + P++VTYNTL+ GLC A K +++ M G G + P
Sbjct: 309 CRKQEVDEALDILEEMNGRGLKPNIVTYNTLIKGLCEAQKWDKMKEILEQMKGDGGSI-P 367
Query: 178 NVVTYTTLMRGYCEKQSIADALAVFEEL 95
+ T+ TL+ +C ++ +A VFE +
Sbjct: 368 DACTFNTLINSHCCAGNLDEAFKVFENM 395
Score = 63.9 bits (154), Expect = 2e-08
Identities = 38/156 (24%), Positives = 68/156 (43%), Gaps = 6/156 (3%)
Frame = -3
Query: 544 SIKVFTTMKSIGVRPSVITFXXXXXXXXXXXRTKMVKKVFAEMPSTGIS-PDVFTFNILI 368
++ + M G++P+++T+ + +K++ +M G S PD TFN LI
Sbjct: 317 ALDILEEMNGRGLKPNIVTYNTLIKGLCEAQKWDKMKEILEQMKGDGGSIPDACTFNTLI 376
Query: 367 RGFCLNSMVDDGFRFFKEMSRFQIHPDVVTYNTLVNGLCRAGKVKTASNLVKGMCGK--- 197
C +D+ F+ F+ M + ++ D +Y+ L+ LC+ G A L + K
Sbjct: 377 NSHCCAGNLDEAFKVFENMKKLEVSADSASYSVLIRTLCQKGDYGKAEMLFDELFEKEIL 436
Query: 196 --GSGLKPNVVTYTTLMRGYCEKQSIADALAVFEEL 95
G KP +Y + + CE A V +L
Sbjct: 437 LSSYGPKPLAASYKCMFQYLCENGKTKKAERVLRQL 472
Score = 55.8 bits (133), Expect(2) = 5e-08
Identities = 28/96 (29%), Positives = 50/96 (52%)
Frame = -3
Query: 382 FNILIRGFCLNSMVDDGFRFFKEMSRFQIHPDVVTYNTLVNGLCRAGKVKTASNLVKGMC 203
FN LIR + + + + F+ M + P VVT+N+++ L + G+ A + M
Sbjct: 158 FNSLIRSYGEAGLFKESVKLFENMKLIGVSPGVVTFNSVLLVLLKRGRTNMAKEVYDEML 217
Query: 202 GKGSGLKPNVVTYTTLMRGYCEKQSIADALAVFEEL 95
K G+KP+ TY L+RG+C+ + + F+E+
Sbjct: 218 -KTYGVKPDTYTYNILIRGFCKNSMVDEGFYFFKEM 252
Score = 26.9 bits (58), Expect(2) = 5e-08
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = -2
Query: 68 ITYNTLVQGLCEAREFEM 15
+TYNTLV GLC A + ++
Sbjct: 262 VTYNTLVDGLCRAGKIKV 279
>ref|XP_007138408.1| hypothetical protein PHAVU_009G206300g [Phaseolus vulgaris]
gi|561011495|gb|ESW10402.1| hypothetical protein
PHAVU_009G206300g [Phaseolus vulgaris]
Length = 728
Score = 178 bits (452), Expect(2) = 2e-47
Identities = 89/151 (58%), Positives = 109/151 (72%), Gaps = 1/151 (0%)
Frame = -3
Query: 544 SIKVFTTMKSIGVRPSVITFXXXXXXXXXXXRTKMVKKVFAEMPST-GISPDVFTFNILI 368
S+K+F TMKS+ V PSV+TF RT M K+V+ EM T G++PD+ T+N+LI
Sbjct: 166 SLKLFQTMKSVAVSPSVVTFNSVLSILLKRGRTNMAKEVYDEMLHTYGVTPDICTYNVLI 225
Query: 367 RGFCLNSMVDDGFRFFKEMSRFQIHPDVVTYNTLVNGLCRAGKVKTASNLVKGMCGKGSG 188
RGFC NSMVD+GFRFF EM+ PD+VTYNTLV+GLCRAGKV+ A NLV M K G
Sbjct: 226 RGFCKNSMVDEGFRFFNEMATVNCDPDIVTYNTLVDGLCRAGKVRIARNLVNAMTKKCEG 285
Query: 187 LKPNVVTYTTLMRGYCEKQSIADALAVFEEL 95
L PNVVTYTTL+RGYC KQ + +AL V EE+
Sbjct: 286 LNPNVVTYTTLIRGYCMKQEVDEALVVLEEM 316
Score = 36.6 bits (83), Expect(2) = 2e-47
Identities = 14/26 (53%), Positives = 21/26 (80%)
Frame = -2
Query: 86 GMKQNRITYNTLVQGLCEAREFEMIK 9
G++ N ITYNTL++GLCEA + + +K
Sbjct: 320 GIEPNMITYNTLIKGLCEAHKLDKMK 345
Score = 88.2 bits (217), Expect(2) = 2e-16
Identities = 44/150 (29%), Positives = 80/150 (53%), Gaps = 2/150 (1%)
Frame = -3
Query: 538 KVFTTMKSIGVRPSVITFXXXXXXXXXXXRTKMVKKVFAEMPST--GISPDVFTFNILIR 365
+ F M ++ P ++T+ + ++ + + M G++P+V T+ LIR
Sbjct: 239 RFFNEMATVNCDPDIVTYNTLVDGLCRAGKVRIARNLVNAMTKKCEGLNPNVVTYTTLIR 298
Query: 364 GFCLNSMVDDGFRFFKEMSRFQIHPDVVTYNTLVNGLCRAGKVKTASNLVKGMCGKGSGL 185
G+C+ VD+ +EMS I P+++TYNTL+ GLC A K+ +++K M G G
Sbjct: 299 GYCMKQEVDEALVVLEEMSGRGIEPNMITYNTLIKGLCEAHKLDKMKDVLKWMKDNG-GF 357
Query: 184 KPNVVTYTTLMRGYCEKQSIADALAVFEEL 95
P+ T+ T++ +C ++ +AL VFE +
Sbjct: 358 SPDTFTFNTIIHSHCCAGNLDEALKVFESM 387
Score = 23.1 bits (48), Expect(2) = 2e-16
Identities = 6/23 (26%), Positives = 17/23 (73%)
Frame = -2
Query: 83 MKQNRITYNTLVQGLCEAREFEM 15
++ + +Y+TL++ LC+ +++M
Sbjct: 392 VRMDSASYSTLIRSLCQKGDYDM 414
Score = 72.0 bits (175), Expect = 9e-11
Identities = 45/156 (28%), Positives = 68/156 (43%), Gaps = 6/156 (3%)
Frame = -3
Query: 544 SIKVFTTMKSIGVRPSVITFXXXXXXXXXXXRTKMVKKVFAEMPSTG-ISPDVFTFNILI 368
++ V M G+ P++IT+ + +K V M G SPD FTFN +I
Sbjct: 309 ALVVLEEMSGRGIEPNMITYNTLIKGLCEAHKLDKMKDVLKWMKDNGGFSPDTFTFNTII 368
Query: 367 RGFCLNSMVDDGFRFFKEMSRFQIHPDVVTYNTLVNGLCRAGKVKTASNLVKGMCGK--- 197
C +D+ + F+ M +FQ+ D +Y+TL+ LC+ G A L + K
Sbjct: 369 HSHCCAGNLDEALKVFESMKKFQVRMDSASYSTLIRSLCQKGDYDMAELLFDELFEKEIL 428
Query: 196 --GSGLKPNVVTYTTLMRGYCEKQSIADALAVFEEL 95
G KP V Y+ L + CE A V +L
Sbjct: 429 LCNFGSKPLVAAYSPLFQYLCEHGKSKKAERVMRQL 464
>gb|EXB37231.1| hypothetical protein L484_020290 [Morus notabilis]
Length = 415
Score = 177 bits (448), Expect(2) = 1e-46
Identities = 89/153 (58%), Positives = 111/153 (72%), Gaps = 1/153 (0%)
Frame = -3
Query: 550 Q*SIKVFTTMKSIGVRPSVITFXXXXXXXXXXXRTKMVKKVFAEMPST-GISPDVFTFNI 374
Q S+++F+TM+ +G+ PS+ TF RT M + VF E+ T G+ D FTFN+
Sbjct: 132 QESLELFSTMERLGISPSLATFNSLLSVLLKRGRTNMARNVFDEILGTLGVESDTFTFNV 191
Query: 373 LIRGFCLNSMVDDGFRFFKEMSRFQIHPDVVTYNTLVNGLCRAGKVKTASNLVKGMCGKG 194
LIRGFC NSMVD+GF FFKEMSRF+ PDVVTYNTL++GLCRAGKV A N+V+GM KG
Sbjct: 192 LIRGFCTNSMVDEGFHFFKEMSRFKCEPDVVTYNTLIDGLCRAGKVDIARNVVEGMKKKG 251
Query: 193 SGLKPNVVTYTTLMRGYCEKQSIADALAVFEEL 95
L PNVVTYTTL+RGYC KQ I +AL V +E+
Sbjct: 252 VDLNPNVVTYTTLIRGYCGKQEIDEALLVLKEM 284
Score = 35.4 bits (80), Expect(2) = 1e-46
Identities = 13/26 (50%), Positives = 22/26 (84%)
Frame = -2
Query: 86 GMKQNRITYNTLVQGLCEAREFEMIK 9
G+K N IT+NTL++GLCEA++ + ++
Sbjct: 288 GLKPNGITHNTLIKGLCEAQKLDDVR 313
Score = 78.6 bits (192), Expect = 1e-12
Identities = 42/148 (28%), Positives = 72/148 (48%), Gaps = 2/148 (1%)
Frame = -3
Query: 532 FTTMKSIGVRPSVITFXXXXXXXXXXXRTKMVKKVFAEMPSTGI--SPDVFTFNILIRGF 359
F M P V+T+ + + + V M G+ +P+V T+ LIRG+
Sbjct: 209 FKEMSRFKCEPDVVTYNTLIDGLCRAGKVDIARNVVEGMKKKGVDLNPNVVTYTTLIRGY 268
Query: 358 CLNSMVDDGFRFFKEMSRFQIHPDVVTYNTLVNGLCRAGKVKTASNLVKGMCGKGSGLKP 179
C +D+ KEM+ + P+ +T+NTL+ GLC A K+ +++G G P
Sbjct: 269 CGKQEIDEALLVLKEMTERGLKPNGITHNTLIKGLCEAQKLDDVRKILEGTMRWGE-FVP 327
Query: 178 NVVTYTTLMRGYCEKQSIADALAVFEEL 95
+ T+ TL+ +C+ + +AL VFE +
Sbjct: 328 DTCTFNTLIHAHCQAGCLHEALKVFERM 355
Score = 53.1 bits (126), Expect(2) = 3e-07
Identities = 26/96 (27%), Positives = 48/96 (50%)
Frame = -3
Query: 382 FNILIRGFCLNSMVDDGFRFFKEMSRFQIHPDVVTYNTLVNGLCRAGKVKTASNLVKGMC 203
FN LIR + + + F M R I P + T+N+L++ L + G+ A N+ +
Sbjct: 118 FNSLIRSYGNAGLFQESLELFSTMERLGISPSLATFNSLLSVLLKRGRTNMARNVFDEIL 177
Query: 202 GKGSGLKPNVVTYTTLMRGYCEKQSIADALAVFEEL 95
G G++ + T+ L+RG+C + + F+E+
Sbjct: 178 GT-LGVESDTFTFNVLIRGFCTNSMVDEGFHFFKEM 212
Score = 26.9 bits (58), Expect(2) = 3e-07
Identities = 9/20 (45%), Positives = 15/20 (75%)
Frame = -2
Query: 68 ITYNTLVQGLCEAREFEMIK 9
+TYNTL+ GLC A + ++ +
Sbjct: 222 VTYNTLIDGLCRAGKVDIAR 241
Score = 59.7 bits (143), Expect = 5e-07
Identities = 38/143 (26%), Positives = 66/143 (46%), Gaps = 1/143 (0%)
Frame = -3
Query: 520 KSIGVRPSVITFXXXXXXXXXXXRTKMVKKVFAEMPSTGISPDVFTFNILIRGFCLNSMV 341
K + + P+V+T+ V EM G+ P+ T N LI+G C +
Sbjct: 250 KGVDLNPNVVTYTTLIRGYCGKQEIDEALLVLKEMTERGLKPNGITHNTLIKGLCEAQKL 309
Query: 340 DDGFRFFKEMSRF-QIHPDVVTYNTLVNGLCRAGKVKTASNLVKGMCGKGSGLKPNVVTY 164
DD + + R+ + PD T+NTL++ C+AG + A + + M + + TY
Sbjct: 310 DDVRKILEGTMRWGEFVPDTCTFNTLIHAHCQAGCLHEALKVFERM--SELQVPHDGATY 367
Query: 163 TTLMRGYCEKQSIADALAVFEEL 95
L+R +C++ A +F+EL
Sbjct: 368 GALIRCFCQRGDYVRAEELFDEL 390
>ref|XP_002511627.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223548807|gb|EEF50296.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 1163
Score = 189 bits (481), Expect = 3e-46
Identities = 96/153 (62%), Positives = 115/153 (75%), Gaps = 1/153 (0%)
Frame = -3
Query: 550 Q*SIKVFTTMKSIGVRPSVITFXXXXXXXXXXXRTKMVKKVFAEMPST-GISPDVFTFNI 374
Q S++VF +MKS+GV PSV+TF RT M + VF EM ST G++PD +TFNI
Sbjct: 173 QESVQVFNSMKSVGVSPSVVTFNSLLLILLKRGRTNMAQSVFDEMLSTYGVTPDTYTFNI 232
Query: 373 LIRGFCLNSMVDDGFRFFKEMSRFQIHPDVVTYNTLVNGLCRAGKVKTASNLVKGMCGKG 194
LIRGFC NSMVD+GFRFFKEMSRF+ PD+VTYNTLV+GLCRAGKV A N+V GM K
Sbjct: 233 LIRGFCKNSMVDEGFRFFKEMSRFKCDPDLVTYNTLVDGLCRAGKVNIAHNVVNGMVKKS 292
Query: 193 SGLKPNVVTYTTLMRGYCEKQSIADALAVFEEL 95
+ L P+VVTYTTL+RGYC K I +AL VFEE+
Sbjct: 293 TNLNPDVVTYTTLVRGYCMKHEIDEALVVFEEM 325
Score = 88.6 bits (218), Expect(2) = 3e-16
Identities = 44/116 (37%), Positives = 66/116 (56%)
Frame = -3
Query: 442 MVKKVFAEMPSTGISPDVFTFNILIRGFCLNSMVDDGFRFFKEMSRFQIHPDVVTYNTLV 263
MVKK ST ++PDV T+ L+RG+C+ +D+ F+EM + P+ +TYNTL+
Sbjct: 288 MVKK------STNLNPDVVTYTTLVRGYCMKHEIDEALVVFEEMVSKGLKPNEITYNTLI 341
Query: 262 NGLCRAGKVKTASNLVKGMCGKGSGLKPNVVTYTTLMRGYCEKQSIADALAVFEEL 95
GLC K+ + +G G G G P+ T TLM +C ++ DAL VFE++
Sbjct: 342 KGLCEVQKIDKIKQIFEGALG-GGGFIPDTCTLNTLMNAHCNAGNLNDALEVFEKM 396
Score = 21.9 bits (45), Expect(2) = 3e-16
Identities = 7/22 (31%), Positives = 14/22 (63%)
Frame = -2
Query: 83 MKQNRITYNTLVQGLCEAREFE 18
++ + TY+ L++ LC+ FE
Sbjct: 401 VRPDSATYSVLIRNLCQRGNFE 422
Score = 66.2 bits (160), Expect = 5e-09
Identities = 41/156 (26%), Positives = 67/156 (42%), Gaps = 6/156 (3%)
Frame = -3
Query: 544 SIKVFTTMKSIGVRPSVITFXXXXXXXXXXXRTKMVKKVF-AEMPSTGISPDVFTFNILI 368
++ VF M S G++P+ IT+ + +K++F + G PD T N L+
Sbjct: 318 ALVVFEEMVSKGLKPNEITYNTLIKGLCEVQKIDKIKQIFEGALGGGGFIPDTCTLNTLM 377
Query: 367 RGFCLNSMVDDGFRFFKEMSRFQIHPDVVTYNTLVNGLCRAGKVKTASNLV-----KGMC 203
C ++D F++M + PD TY+ L+ LC+ G + A L K +
Sbjct: 378 NAHCNAGNLNDALEVFEKMMVLNVRPDSATYSVLIRNLCQRGNFERAEQLFDELSEKEIL 437
Query: 202 GKGSGLKPNVVTYTTLMRGYCEKQSIADALAVFEEL 95
+ G P V Y ++ C A A VF +L
Sbjct: 438 LRDDGCTPLVAAYKSMFEFLCRNGKTAKAERVFRQL 473
Score = 52.0 bits (123), Expect(2) = 9e-07
Identities = 26/96 (27%), Positives = 48/96 (50%)
Frame = -3
Query: 382 FNILIRGFCLNSMVDDGFRFFKEMSRFQIHPDVVTYNTLVNGLCRAGKVKTASNLVKGMC 203
FN LIR + + + + F M + P VVT+N+L+ L + G+ A ++ M
Sbjct: 159 FNSLIRSYGKAGLFQESVQVFNSMKSVGVSPSVVTFNSLLLILLKRGRTNMAQSVFDEML 218
Query: 202 GKGSGLKPNVVTYTTLMRGYCEKQSIADALAVFEEL 95
G+ P+ T+ L+RG+C+ + + F+E+
Sbjct: 219 ST-YGVTPDTYTFNILIRGFCKNSMVDEGFRFFKEM 253
Score = 26.6 bits (57), Expect(2) = 9e-07
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = -2
Query: 68 ITYNTLVQGLCEA 30
+TYNTLV GLC A
Sbjct: 263 VTYNTLVDGLCRA 275
>ref|XP_004308525.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
chloroplastic-like [Fragaria vesca subsp. vesca]
Length = 1128
Score = 169 bits (427), Expect(2) = 2e-45
Identities = 89/158 (56%), Positives = 109/158 (68%), Gaps = 6/158 (3%)
Frame = -3
Query: 550 Q*SIKVFTTMKSIGVRPSVITFXXXXXXXXXXXRTKMVKKVFAEMPST-GISPDVFTFNI 374
Q ++ VF TMKS+G+ SV +F RT MV+ V+ EM G+ PD TFNI
Sbjct: 167 QEAVNVFKTMKSMGISASVFSFNSLFSVLLKRGRTSMVRNVYDEMLGMYGVEPDTHTFNI 226
Query: 373 LIRGFCLNSMVDDGFRFFKEMSRFQIHPDVVTYNTLVNGLCRAGKVKTASNLVKGMCGKG 194
LIRGFC++SMVD+GF FFKEM RF+ PDVVTYNTLV+GLCR GKV+ A N+VKGM K
Sbjct: 227 LIRGFCMSSMVDEGFWFFKEMERFKCEPDVVTYNTLVDGLCRDGKVEIARNVVKGMMSKS 286
Query: 193 S-----GLKPNVVTYTTLMRGYCEKQSIADALAVFEEL 95
S L PNVVTYTTL+RGYC +Q + +AL V EE+
Sbjct: 287 SEGELNQLNPNVVTYTTLIRGYCVRQEVDEALGVLEEM 324
Score = 40.0 bits (92), Expect(2) = 2e-45
Identities = 17/26 (65%), Positives = 20/26 (76%)
Frame = -2
Query: 86 GMKQNRITYNTLVQGLCEAREFEMIK 9
GMK N ITYNTL +GLCEA+ + IK
Sbjct: 328 GMKPNEITYNTLFKGLCEAKRLDKIK 353
Score = 79.3 bits (194), Expect(2) = 4e-13
Identities = 43/150 (28%), Positives = 74/150 (49%), Gaps = 7/150 (4%)
Frame = -3
Query: 532 FTTMKSIGVRPSVITFXXXXXXXXXXXRTKMVKKVFAEMPSTG-------ISPDVFTFNI 374
F M+ P V+T+ + ++ + V M S ++P+V T+
Sbjct: 244 FKEMERFKCEPDVVTYNTLVDGLCRDGKVEIARNVVKGMMSKSSEGELNQLNPNVVTYTT 303
Query: 373 LIRGFCLNSMVDDGFRFFKEMSRFQIHPDVVTYNTLVNGLCRAGKVKTASNLVKGMCGKG 194
LIRG+C+ VD+ +EM+ + P+ +TYNTL GLC A ++ +++G +G
Sbjct: 304 LIRGYCVRQEVDEALGVLEEMTSQGMKPNEITYNTLFKGLCEAKRLDKIKEILEGAM-RG 362
Query: 193 SGLKPNVVTYTTLMRGYCEKQSIADALAVF 104
G P+ T+ TLM +C ++ +AL VF
Sbjct: 363 EGFTPDTCTFNTLMHSHCIAGNLEEALKVF 392
Score = 20.8 bits (42), Expect(2) = 4e-13
Identities = 6/15 (40%), Positives = 11/15 (73%)
Frame = -2
Query: 65 TYNTLVQGLCEAREF 21
TY+ L++ CE R++
Sbjct: 406 TYSVLIRSWCERRDY 420
Score = 60.5 bits (145), Expect = 3e-07
Identities = 39/156 (25%), Positives = 64/156 (41%), Gaps = 6/156 (3%)
Frame = -3
Query: 544 SIKVFTTMKSIGVRPSVITFXXXXXXXXXXXRTKMVKKVF-AEMPSTGISPDVFTFNILI 368
++ V M S G++P+ IT+ R +K++ M G +PD TFN L+
Sbjct: 317 ALGVLEEMTSQGMKPNEITYNTLFKGLCEAKRLDKIKEILEGAMRGEGFTPDTCTFNTLM 376
Query: 367 RGFCLNSMVDDGFRFFKEMSRFQIHPDVVTYNTLVNGLCRAGKVKTASNLVKGMCGK--- 197
C+ +++ + F+ MS ++ PD TY+ L+ C A L + K
Sbjct: 377 HSHCIAGNLEEALKVFRMMSELKVPPDSATYSVLIRSWCERRDYSKAEELFDELSKKQIL 436
Query: 196 --GSGLKPNVVTYTTLMRGYCEKQSIADALAVFEEL 95
G P V +Y + C A VF +L
Sbjct: 437 LSDCGCTPIVASYKPIFEYLCSNGRTKKADEVFRQL 472