BLASTX nr result
ID: Sinomenium22_contig00048496
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium22_contig00048496
(362 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAF01759.1| putative non-LTR retroelement reverse transcript... 77 2e-12
gb|AAD17398.1| putative non-LTR retroelement reverse transcripta... 77 2e-12
emb|CAB75484.1| putative protein [Arabidopsis thaliana] 71 1e-10
ref|NP_001175161.1| Os07g0417700 [Oryza sativa Japonica Group] g... 69 7e-10
gb|EEE66599.1| hypothetical protein OsJ_23164 [Oryza sativa Japo... 68 1e-09
ref|NP_001176302.1| Os11g0106066 [Oryza sativa Japonica Group] g... 68 2e-09
gb|EEE51498.1| hypothetical protein OsJ_32653 [Oryza sativa Japo... 68 2e-09
gb|EEC80601.1| hypothetical protein OsI_22949 [Oryza sativa Indi... 68 2e-09
gb|EEC68693.1| hypothetical protein OsI_37162 [Oryza sativa Indi... 68 2e-09
ref|XP_007224193.1| hypothetical protein PRUPE_ppa017155mg, part... 67 2e-09
ref|XP_007203344.1| hypothetical protein PRUPE_ppa020282mg [Prun... 67 2e-09
gb|EEE65703.1| hypothetical protein OsJ_21337 [Oryza sativa Japo... 67 2e-09
gb|AAD29058.1| putative non-LTR retroelement reverse transcripta... 67 2e-09
ref|XP_007214818.1| hypothetical protein PRUPE_ppa024509m2g, par... 67 3e-09
gb|AAC33961.1| contains similarity to reverse trancriptase (Pfam... 67 3e-09
gb|EEE69144.1| hypothetical protein OsJ_28268 [Oryza sativa Japo... 67 3e-09
gb|EAZ07996.1| hypothetical protein OsI_30258 [Oryza sativa Indi... 67 3e-09
emb|CAB40051.1| putative protein [Arabidopsis thaliana] gi|72677... 67 3e-09
emb|CAB39638.1| RNA-directed DNA polymerase-like protein [Arabid... 67 3e-09
gb|AAM01179.2|AC113336_31 Putative retroelement [Oryza sativa Ja... 66 4e-09
>dbj|BAF01759.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 400
Score = 77.0 bits (188), Expect = 2e-12
Identities = 35/87 (40%), Positives = 53/87 (60%)
Frame = -2
Query: 277 TPRSIIQAIDEVNLEKILGPDDFNAFFFKQDWNIAGDDTIKRIDHFFKTAIFPSRLIPFS 98
+P + +A+ +N +K GPD AFF++ W++ G D IK + +F T F RL +
Sbjct: 10 SPEEVKRALFSLNPDKAPGPDGMTAFFYQHYWDLTGPDLIKLVQNFHSTGFFDERLNETN 69
Query: 97 ITLIPKVKGTQKIADFHPIVLCNVPYR 17
I LIPK + +K+A+F PI LCNV Y+
Sbjct: 70 ICLIPKTERPRKMAEFRPISLCNVSYK 96
>gb|AAD17398.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1225
Score = 77.0 bits (188), Expect = 2e-12
Identities = 35/87 (40%), Positives = 53/87 (60%)
Frame = -2
Query: 277 TPRSIIQAIDEVNLEKILGPDDFNAFFFKQDWNIAGDDTIKRIDHFFKTAIFPSRLIPFS 98
+P + +A+ +N +K GPD AFF++ W++ G D IK + +F T F RL +
Sbjct: 376 SPEEVKRALFSLNPDKAPGPDGMTAFFYQHYWDLTGPDLIKLVQNFHSTGFFDERLNETN 435
Query: 97 ITLIPKVKGTQKIADFHPIVLCNVPYR 17
I LIPK + +K+A+F PI LCNV Y+
Sbjct: 436 ICLIPKTERPRKMAEFRPISLCNVSYK 462
>emb|CAB75484.1| putative protein [Arabidopsis thaliana]
Length = 851
Score = 71.2 bits (173), Expect = 1e-10
Identities = 32/83 (38%), Positives = 53/83 (63%)
Frame = -2
Query: 265 IIQAIDEVNLEKILGPDDFNAFFFKQDWNIAGDDTIKRIDHFFKTAIFPSRLIPFSITLI 86
I +AI ++ +K GPD A F+KQ W+I G+D IK + FF+++ + + +I +I
Sbjct: 54 IFEAICQIGDDKAPGPDGLTARFYKQCWDIVGNDVIKEVKLFFESSHMKTSVNHTNICMI 113
Query: 85 PKVKGTQKIADFHPIVLCNVPYR 17
PK++ Q ++D+ PI LCNV Y+
Sbjct: 114 PKIQNPQTLSDYRPIALCNVLYK 136
>ref|NP_001175161.1| Os07g0417700 [Oryza sativa Japonica Group]
gi|255677700|dbj|BAH93889.1| Os07g0417700 [Oryza sativa
Japonica Group]
Length = 1011
Score = 68.9 bits (167), Expect = 7e-10
Identities = 31/84 (36%), Positives = 51/84 (60%)
Frame = -2
Query: 265 IIQAIDEVNLEKILGPDDFNAFFFKQDWNIAGDDTIKRIDHFFKTAIFPSRLIPFSITLI 86
I A+ ++ K GPD F A F++++W + +D ++ + FF T + PS + +I LI
Sbjct: 125 IATAVFQIGPLKAPGPDGFPARFYERNWGVLKEDIVRVVKTFFLTGVMPSGVNNTAIVLI 184
Query: 85 PKVKGTQKIADFHPIVLCNVPYRF 14
PK++ ++ DF PI LCNV Y+F
Sbjct: 185 PKIEQPMEVKDFRPISLCNVLYKF 208
>gb|EEE66599.1| hypothetical protein OsJ_23164 [Oryza sativa Japonica Group]
Length = 813
Score = 68.2 bits (165), Expect = 1e-09
Identities = 33/87 (37%), Positives = 50/87 (57%)
Frame = -2
Query: 277 TPRSIIQAIDEVNLEKILGPDDFNAFFFKQDWNIAGDDTIKRIDHFFKTAIFPSRLIPFS 98
T + I A+ ++ K GPD F A FF+++W+ D + + FF+T+I P + +
Sbjct: 503 TEQEIADALFQIGPIKAPGPDGFPARFFQRNWDAIKKDVVSAVKSFFETSIMPEGVNDTA 562
Query: 97 ITLIPKVKGTQKIADFHPIVLCNVPYR 17
I LIPKV ++ DF PI LCNV Y+
Sbjct: 563 IVLIPKVDQPMELKDFRPISLCNVIYK 589
>ref|NP_001176302.1| Os11g0106066 [Oryza sativa Japonica Group] gi|77548275|gb|ABA91072.1|
retrotransposon protein, putative, unclassified [Oryza
sativa Japonica Group] gi|255679693|dbj|BAH95030.1|
Os11g0106066 [Oryza sativa Japonica Group]
Length = 1690
Score = 67.8 bits (164), Expect = 2e-09
Identities = 32/83 (38%), Positives = 49/83 (59%)
Frame = -2
Query: 265 IIQAIDEVNLEKILGPDDFNAFFFKQDWNIAGDDTIKRIDHFFKTAIFPSRLIPFSITLI 86
I QA+ ++ K GPD F A F++++W I +D I + FF+T P + +I LI
Sbjct: 1039 IAQALFQIGPLKAPGPDGFPARFYQRNWGIIKEDIISAVSKFFQTGCMPEGVNNTTIVLI 1098
Query: 85 PKVKGTQKIADFHPIVLCNVPYR 17
PK++ ++ DF PI LCNV Y+
Sbjct: 1099 PKIEQPMELKDFRPISLCNVLYK 1121
>gb|EEE51498.1| hypothetical protein OsJ_32653 [Oryza sativa Japonica Group]
Length = 1322
Score = 67.8 bits (164), Expect = 2e-09
Identities = 32/83 (38%), Positives = 49/83 (59%)
Frame = -2
Query: 265 IIQAIDEVNLEKILGPDDFNAFFFKQDWNIAGDDTIKRIDHFFKTAIFPSRLIPFSITLI 86
I QA+ ++ K GPD F A F++++W I +D I + FF+T P + +I LI
Sbjct: 1018 IAQALFQIGPLKAPGPDGFPARFYQRNWGIIKEDIISAVSKFFQTGCMPEGVNNTTIVLI 1077
Query: 85 PKVKGTQKIADFHPIVLCNVPYR 17
PK++ ++ DF PI LCNV Y+
Sbjct: 1078 PKIEQPMELKDFRPISLCNVLYK 1100
>gb|EEC80601.1| hypothetical protein OsI_22949 [Oryza sativa Indica Group]
Length = 466
Score = 67.8 bits (164), Expect = 2e-09
Identities = 32/83 (38%), Positives = 49/83 (59%)
Frame = -2
Query: 265 IIQAIDEVNLEKILGPDDFNAFFFKQDWNIAGDDTIKRIDHFFKTAIFPSRLIPFSITLI 86
I QA+ ++ K GPD F A F++++W I +D I + FF+T P + +I LI
Sbjct: 106 IAQALFQIGPLKAPGPDGFPARFYQRNWGIIKEDIISAVSKFFQTGCMPEGVNNTAIVLI 165
Query: 85 PKVKGTQKIADFHPIVLCNVPYR 17
PK++ ++ DF PI LCNV Y+
Sbjct: 166 PKIEQPMELKDFRPISLCNVLYK 188
>gb|EEC68693.1| hypothetical protein OsI_37162 [Oryza sativa Indica Group]
Length = 1283
Score = 67.8 bits (164), Expect = 2e-09
Identities = 32/83 (38%), Positives = 49/83 (59%)
Frame = -2
Query: 265 IIQAIDEVNLEKILGPDDFNAFFFKQDWNIAGDDTIKRIDHFFKTAIFPSRLIPFSITLI 86
I QA+ ++ K GPD F A F++++W I +D I + FF+T P + +I LI
Sbjct: 890 IAQALFQIGPLKAPGPDGFPARFYQRNWGIIKEDIISAVSKFFQTGCMPEGVNNTTIVLI 949
Query: 85 PKVKGTQKIADFHPIVLCNVPYR 17
PK++ ++ DF PI LCNV Y+
Sbjct: 950 PKIEQPMELKDFRPISLCNVLYK 972
>ref|XP_007224193.1| hypothetical protein PRUPE_ppa017155mg, partial [Prunus persica]
gi|462421129|gb|EMJ25392.1| hypothetical protein
PRUPE_ppa017155mg, partial [Prunus persica]
Length = 916
Score = 67.4 bits (163), Expect = 2e-09
Identities = 32/84 (38%), Positives = 48/84 (57%)
Frame = -2
Query: 277 TPRSIIQAIDEVNLEKILGPDDFNAFFFKQDWNIAGDDTIKRIDHFFKTAIFPSRLIPFS 98
TP I A+ +++ K GPDDF+ FF+++ W I G+D + + HFFKT ++
Sbjct: 312 TPEEIKIALFQMHPSKAPGPDDFSPFFYQKYWQIVGEDMVAAVLHFFKTGKLLKKINFTH 371
Query: 97 ITLIPKVKGTQKIADFHPIVLCNV 26
+ LIPKV + + PI LCNV
Sbjct: 372 VALIPKVHEPKNMTQLRPISLCNV 395
>ref|XP_007203344.1| hypothetical protein PRUPE_ppa020282mg [Prunus persica]
gi|462398875|gb|EMJ04543.1| hypothetical protein
PRUPE_ppa020282mg [Prunus persica]
Length = 1496
Score = 67.4 bits (163), Expect = 2e-09
Identities = 33/87 (37%), Positives = 49/87 (56%)
Frame = -2
Query: 277 TPRSIIQAIDEVNLEKILGPDDFNAFFFKQDWNIAGDDTIKRIDHFFKTAIFPSRLIPFS 98
TP I A+ +++ K GPD F+ FF+++ W I G+D + + HFFKT R+
Sbjct: 792 TPEEIKIALFQMHPSKAPGPDGFSPFFYQKYWPIVGEDVVAAVLHFFKTGKLLKRINFTH 851
Query: 97 ITLIPKVKGTQKIADFHPIVLCNVPYR 17
+ LIPKV + + PI LCNV Y+
Sbjct: 852 VALIPKVHEPKNMMQLRPISLCNVLYK 878
>gb|EEE65703.1| hypothetical protein OsJ_21337 [Oryza sativa Japonica Group]
Length = 217
Score = 67.4 bits (163), Expect = 2e-09
Identities = 32/83 (38%), Positives = 49/83 (59%)
Frame = -2
Query: 265 IIQAIDEVNLEKILGPDDFNAFFFKQDWNIAGDDTIKRIDHFFKTAIFPSRLIPFSITLI 86
I QA+ ++ K GPD F A F++++W I +D I + FF+T P + +I LI
Sbjct: 49 IAQALFQIGPLKAPGPDGFPARFYQRNWGIIKEDIISAVSKFFQTRCMPEGVNNTAIVLI 108
Query: 85 PKVKGTQKIADFHPIVLCNVPYR 17
PK++ ++ DF PI LCNV Y+
Sbjct: 109 PKIEQPMELKDFRPISLCNVLYK 131
>gb|AAD29058.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1229
Score = 67.4 bits (163), Expect = 2e-09
Identities = 33/80 (41%), Positives = 45/80 (56%)
Frame = -2
Query: 256 AIDEVNLEKILGPDDFNAFFFKQDWNIAGDDTIKRIDHFFKTAIFPSRLIPFSITLIPKV 77
A+ +N K GPD F A F+ W+I D + I FF + FP R+ I LIPK
Sbjct: 331 AVFSINASKAPGPDGFTAGFYHSYWHIISTDVGREIRLFFTSKNFPRRMNETHIRLIPKD 390
Query: 76 KGTQKIADFHPIVLCNVPYR 17
G +K+AD+ PI LCN+ Y+
Sbjct: 391 LGPRKVADYRPIALCNIFYK 410
>ref|XP_007214818.1| hypothetical protein PRUPE_ppa024509m2g, partial [Prunus persica]
gi|462410683|gb|EMJ16017.1| hypothetical protein
PRUPE_ppa024509m2g, partial [Prunus persica]
Length = 360
Score = 67.0 bits (162), Expect = 3e-09
Identities = 33/87 (37%), Positives = 49/87 (56%)
Frame = -2
Query: 277 TPRSIIQAIDEVNLEKILGPDDFNAFFFKQDWNIAGDDTIKRIDHFFKTAIFPSRLIPFS 98
TP I A+ +++ K GPD F+ FF+++ W I G+D + I HFFKT ++
Sbjct: 136 TPEEIKFALFQMHPSKAPGPDGFSPFFYQKYWQIVGEDMVAAILHFFKTGRLLKKINFTH 195
Query: 97 ITLIPKVKGTQKIADFHPIVLCNVPYR 17
+ LIPKV + + PI LCNV Y+
Sbjct: 196 VALIPKVHEPKNMMQLRPISLCNVLYK 222
>gb|AAC33961.1| contains similarity to reverse trancriptase (Pfam: rvt.hmm, score:
42.57) [Arabidopsis thaliana]
Length = 1662
Score = 67.0 bits (162), Expect = 3e-09
Identities = 31/83 (37%), Positives = 46/83 (55%)
Frame = -2
Query: 265 IIQAIDEVNLEKILGPDDFNAFFFKQDWNIAGDDTIKRIDHFFKTAIFPSRLIPFSITLI 86
I AI + +K GPD A F+K W I G D IK + FF+T+ + +I +I
Sbjct: 815 IYNAICHIGDDKAPGPDGLTARFYKSCWEIVGPDVIKEVKIFFRTSYMKQSINHTNICMI 874
Query: 85 PKVKGTQKIADFHPIVLCNVPYR 17
PK+ + ++D+ PI LCNV Y+
Sbjct: 875 PKITNPETLSDYRPIALCNVLYK 897
>gb|EEE69144.1| hypothetical protein OsJ_28268 [Oryza sativa Japonica Group]
Length = 1256
Score = 67.0 bits (162), Expect = 3e-09
Identities = 31/83 (37%), Positives = 48/83 (57%)
Frame = -2
Query: 265 IIQAIDEVNLEKILGPDDFNAFFFKQDWNIAGDDTIKRIDHFFKTAIFPSRLIPFSITLI 86
I A+ ++ K GPD F F++++W I DD ++ + FF + PS + +I LI
Sbjct: 512 IANALFQIGPLKAPGPDGFPGRFYQRNWAILKDDIVRAVQEFFSSGTMPSGVNETAIVLI 571
Query: 85 PKVKGTQKIADFHPIVLCNVPYR 17
PK + Q++ DF PI LCNV Y+
Sbjct: 572 PKTEQPQELKDFRPISLCNVVYK 594
>gb|EAZ07996.1| hypothetical protein OsI_30258 [Oryza sativa Indica Group]
Length = 633
Score = 67.0 bits (162), Expect = 3e-09
Identities = 31/83 (37%), Positives = 48/83 (57%)
Frame = -2
Query: 265 IIQAIDEVNLEKILGPDDFNAFFFKQDWNIAGDDTIKRIDHFFKTAIFPSRLIPFSITLI 86
I A+ ++ K GPD F F++++W I DD ++ + FF + PS + +I LI
Sbjct: 512 IANALFQIGPLKAPGPDGFPGRFYQRNWAILKDDIVRAVQEFFSSGTMPSGVNETAIVLI 571
Query: 85 PKVKGTQKIADFHPIVLCNVPYR 17
PK + Q++ DF PI LCNV Y+
Sbjct: 572 PKTEQPQELKDFRPISLCNVVYK 594
>emb|CAB40051.1| putative protein [Arabidopsis thaliana] gi|7267781|emb|CAB81184.1|
putative protein [Arabidopsis thaliana]
Length = 1294
Score = 67.0 bits (162), Expect = 3e-09
Identities = 31/83 (37%), Positives = 46/83 (55%)
Frame = -2
Query: 265 IIQAIDEVNLEKILGPDDFNAFFFKQDWNIAGDDTIKRIDHFFKTAIFPSRLIPFSITLI 86
I AI + +K GPD A F+K W I G D IK + FF+T+ + +I +I
Sbjct: 795 IYNAICHIGDDKAPGPDGLTARFYKSCWEIVGPDVIKEVKIFFRTSYMKQSINHTNICMI 854
Query: 85 PKVKGTQKIADFHPIVLCNVPYR 17
PK+ + ++D+ PI LCNV Y+
Sbjct: 855 PKITNPETLSDYRPIALCNVLYK 877
>emb|CAB39638.1| RNA-directed DNA polymerase-like protein [Arabidopsis thaliana]
gi|7267666|emb|CAB78094.1| RNA-directed DNA
polymerase-like protein [Arabidopsis thaliana]
Length = 1274
Score = 67.0 bits (162), Expect = 3e-09
Identities = 32/83 (38%), Positives = 48/83 (57%)
Frame = -2
Query: 265 IIQAIDEVNLEKILGPDDFNAFFFKQDWNIAGDDTIKRIDHFFKTAIFPSRLIPFSITLI 86
I +A+ ++ +K GPD F+A FF W+I D + I FF + RL +TLI
Sbjct: 374 IKEALFSISADKAPGPDGFSASFFHAYWDIIEADVSRDIRSFFVDSCLSPRLNETHVTLI 433
Query: 85 PKVKGTQKIADFHPIVLCNVPYR 17
PK+ +K++D+ PI LCNV Y+
Sbjct: 434 PKISAPRKVSDYRPIALCNVQYK 456
>gb|AAM01179.2|AC113336_31 Putative retroelement [Oryza sativa Japonica Group]
Length = 1888
Score = 66.2 bits (160), Expect = 4e-09
Identities = 31/83 (37%), Positives = 47/83 (56%)
Frame = -2
Query: 265 IIQAIDEVNLEKILGPDDFNAFFFKQDWNIAGDDTIKRIDHFFKTAIFPSRLIPFSITLI 86
I A+ ++ K GPD F F++++W I DD ++ + FF PS + +I LI
Sbjct: 1004 IANALFQIGPLKAPGPDGFPGRFYQRNWAILKDDIVRAVQEFFSLGTMPSGVNETAIVLI 1063
Query: 85 PKVKGTQKIADFHPIVLCNVPYR 17
PK + Q++ DF PI LCNV Y+
Sbjct: 1064 PKTEQPQELKDFRPISLCNVVYK 1086