BLASTX nr result
ID: Sinomenium22_contig00048337
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium22_contig00048337
(323 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006493033.1| PREDICTED: pentatricopeptide repeat-containi... 75 7e-12
ref|XP_006428728.1| hypothetical protein CICLE_v10011284mg [Citr... 75 7e-12
ref|XP_004306251.1| PREDICTED: pentatricopeptide repeat-containi... 72 8e-11
ref|XP_002515739.1| pentatricopeptide repeat-containing protein,... 71 1e-10
gb|EXC22880.1| hypothetical protein L484_007489 [Morus notabilis] 70 3e-10
ref|XP_006410393.1| hypothetical protein EUTSA_v10017786mg [Eutr... 69 9e-10
ref|XP_007206240.1| hypothetical protein PRUPE_ppa015514mg, part... 68 2e-09
ref|NP_180822.1| pentatricopeptide repeat-containing protein [Ar... 68 2e-09
ref|XP_002276762.2| PREDICTED: pentatricopeptide repeat-containi... 67 3e-09
ref|XP_002879404.1| pentatricopeptide repeat-containing protein ... 67 3e-09
emb|CBI32762.3| unnamed protein product [Vitis vinifera] 67 3e-09
ref|XP_006296491.1| hypothetical protein CARUB_v10025677mg [Caps... 66 6e-09
ref|XP_002534209.1| pentatricopeptide repeat-containing protein,... 66 6e-09
ref|XP_004240667.1| PREDICTED: pentatricopeptide repeat-containi... 64 3e-08
ref|XP_004172591.1| PREDICTED: pentatricopeptide repeat-containi... 64 3e-08
ref|XP_004137973.1| PREDICTED: pentatricopeptide repeat-containi... 64 3e-08
ref|XP_006339300.1| PREDICTED: pentatricopeptide repeat-containi... 63 4e-08
gb|EXC16187.1| hypothetical protein L484_024357 [Morus notabilis] 62 1e-07
ref|XP_002879120.1| pentatricopeptide repeat-containing protein ... 60 2e-07
ref|XP_007016826.1| Pentatricopeptide repeat-containing protein,... 60 3e-07
>ref|XP_006493033.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g32630-like [Citrus sinensis]
Length = 630
Score = 75.5 bits (184), Expect = 7e-12
Identities = 42/105 (40%), Positives = 60/105 (57%)
Frame = +2
Query: 5 VCKALVHSNIESLLQPTSRLICNLNANIVHLVLSSPRLKTRACLSFFNFLNNNRDFSSYK 184
+ K L +S IE + T L+ NLN++I HLVLS L ACL FFNFL N S++
Sbjct: 30 IAKTLFNSGIEPF-KTTPSLLSNLNSHITHLVLSDTNLPPHACLHFFNFLRQNPSLYSHR 88
Query: 185 HDLQAYVTIGSRLFKDKRFATAKEILNSAAIQGEVKRSLAVTASL 319
DLQA+VT+ RL + ++FA K++ N ++ S+ SL
Sbjct: 89 PDLQAHVTLICRLHEAQKFAEMKKVFNYIVTDANLRCSIVNLISL 133
>ref|XP_006428728.1| hypothetical protein CICLE_v10011284mg [Citrus clementina]
gi|557530785|gb|ESR41968.1| hypothetical protein
CICLE_v10011284mg [Citrus clementina]
Length = 630
Score = 75.5 bits (184), Expect = 7e-12
Identities = 42/105 (40%), Positives = 60/105 (57%)
Frame = +2
Query: 5 VCKALVHSNIESLLQPTSRLICNLNANIVHLVLSSPRLKTRACLSFFNFLNNNRDFSSYK 184
+ K L +S IE + T L+ NLN++I HLVLS L ACL FFNFL N S++
Sbjct: 30 IAKTLFNSGIEPF-KTTPSLLSNLNSHITHLVLSDTNLPPHACLHFFNFLRQNPSLYSHR 88
Query: 185 HDLQAYVTIGSRLFKDKRFATAKEILNSAAIQGEVKRSLAVTASL 319
DLQA+VT+ RL + ++FA K++ N ++ S+ SL
Sbjct: 89 PDLQAHVTLICRLHEAQKFAEMKKVFNYIVTDANLRCSIVNLISL 133
>ref|XP_004306251.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g32630-like [Fragaria vesca subsp. vesca]
Length = 602
Score = 72.0 bits (175), Expect = 8e-11
Identities = 36/88 (40%), Positives = 53/88 (60%)
Frame = +2
Query: 5 VCKALVHSNIESLLQPTSRLICNLNANIVHLVLSSPRLKTRACLSFFNFLNNNRDFSSYK 184
+ K L S ++ L + L+ NLN +I HLVLS P L ++CL+FFNFL N +
Sbjct: 11 IAKTLADSGLQHLRTSSPSLLSNLNPHITHLVLSDPILPPQSCLTFFNFLRRNPSLIPLR 70
Query: 185 HDLQAYVTIGSRLFKDKRFATAKEILNS 268
+LQA+VT+ RL + RFA K ++N+
Sbjct: 71 PNLQAHVTLFCRLHQANRFAQMKNVVNT 98
>ref|XP_002515739.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223545176|gb|EEF46686.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 613
Score = 71.2 bits (173), Expect = 1e-10
Identities = 39/105 (37%), Positives = 64/105 (60%)
Frame = +2
Query: 5 VCKALVHSNIESLLQPTSRLICNLNANIVHLVLSSPRLKTRACLSFFNFLNNNRDFSSYK 184
+ K L+ S ++ L + S L+ NL++ +LVLS+P L TR+CL+FF L N+ +K
Sbjct: 30 ITKILIKSGLKPL-ETKSSLLSNLDSYTTNLVLSNPNLPTRSCLNFFKCLQKNQSLICHK 88
Query: 185 HDLQAYVTIGSRLFKDKRFATAKEILNSAAIQGEVKRSLAVTASL 319
DL+A+V + SRLFK ++F K +L A+ ++ S++ SL
Sbjct: 89 PDLRAHVILISRLFKARKFVVMKNVLTCYAMDKNLRCSVSDFVSL 133
>gb|EXC22880.1| hypothetical protein L484_007489 [Morus notabilis]
Length = 134
Score = 70.1 bits (170), Expect = 3e-10
Identities = 34/84 (40%), Positives = 51/84 (60%)
Frame = +2
Query: 65 ICNLNANIVHLVLSSPRLKTRACLSFFNFLNNNRDFSSYKHDLQAYVTIGSRLFKDKRFA 244
+ +L+ N +HL+LS P +++ C FFNFL NR F S K DLQA++T+ SRL K + F+
Sbjct: 49 LSHLDLNSLHLILSDPNVRSSVCFKFFNFLVKNRSFVSVKPDLQAHLTLISRLLKSRNFS 108
Query: 245 TAKEILNSAAIQGEVKRSLAVTAS 316
A+ +L S ++ V AS
Sbjct: 109 QAENLLRSVSVGENCDYPFPVIAS 132
>ref|XP_006410393.1| hypothetical protein EUTSA_v10017786mg [Eutrema salsugineum]
gi|557111562|gb|ESQ51846.1| hypothetical protein
EUTSA_v10017786mg [Eutrema salsugineum]
Length = 626
Score = 68.6 bits (166), Expect = 9e-10
Identities = 38/81 (46%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Frame = +2
Query: 44 LQPTSRLICNLNANIVHLVLSSPRLKTRACLSFFNFLNNNRDFSS-YKHDLQAYVTIGSR 220
LQ L+ NLN+N+ LVLS P L T++C+ FF FL R F S + DL A VT+ R
Sbjct: 52 LQSNPSLLFNLNSNVTRLVLSKPTLPTQSCIDFFKFL---RTFESRLRPDLTAVVTLAHR 108
Query: 221 LFKDKRFATAKEILNSAAIQG 283
L+ D+RF K +LNS A G
Sbjct: 109 LYSDRRFHEMKSLLNSVASDG 129
>ref|XP_007206240.1| hypothetical protein PRUPE_ppa015514mg, partial [Prunus persica]
gi|462401882|gb|EMJ07439.1| hypothetical protein
PRUPE_ppa015514mg, partial [Prunus persica]
Length = 417
Score = 67.8 bits (164), Expect = 2e-09
Identities = 34/87 (39%), Positives = 51/87 (58%)
Frame = +2
Query: 62 LICNLNANIVHLVLSSPRLKTRACLSFFNFLNNNRDFSSYKHDLQAYVTIGSRLFKDKRF 241
L+ L N ++L+LS P+ K CL FFNFL N+ F S+K DL A++T+ RL K ++F
Sbjct: 14 LLSKLKPNFLNLILSDPKFKCSRCLLFFNFLLKNQSFISFKIDLHAHLTLICRLLKARKF 73
Query: 242 ATAKEILNSAAIQGEVKRSLAVTASLA 322
A+EI ++ + +V AS A
Sbjct: 74 TEAEEIFKCISVDENSRYPFSVIASAA 100
>ref|NP_180822.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75160493|sp|Q8S8P6.1|PP180_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At2g32630 gi|20197234|gb|AAM14987.1| putative
salt-inducible protein [Arabidopsis thaliana]
gi|330253613|gb|AEC08707.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 624
Score = 67.8 bits (164), Expect = 2e-09
Identities = 39/98 (39%), Positives = 55/98 (56%), Gaps = 1/98 (1%)
Frame = +2
Query: 5 VCKALVHSNIESLLQPTSRLICNLNANIVHLVLSSPRLKTRACLSFFNFLNNNRDF-SSY 181
+ LV + LQ L+ NLN+N+ LVLS P L T++C+ FF L R+F S+
Sbjct: 37 ITACLVEKSTIGKLQSNPSLLFNLNSNVTRLVLSEPTLPTQSCIDFFKLL---REFESNL 93
Query: 182 KHDLQAYVTIGSRLFKDKRFATAKEILNSAAIQGEVKR 295
K DL A VT+ RL+ ++RF + +LNS G KR
Sbjct: 94 KPDLTAVVTLSHRLYSNRRFNEMRSLLNSVVNDGFYKR 131
>ref|XP_002276762.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g32630-like [Vitis vinifera]
Length = 625
Score = 67.0 bits (162), Expect = 3e-09
Identities = 41/114 (35%), Positives = 63/114 (55%), Gaps = 9/114 (7%)
Frame = +2
Query: 5 VCKALVHSNIESLLQPTSRLICNLNANIVHLVLSSPRLKTRACLSFFNFLNNNRDFSSYK 184
+ K LV S +SL Q T L+ +LN+ VHL+LS+ L +CL FF+F+ N YK
Sbjct: 30 ISKTLVSSGAKSL-QTTPSLLSSLNSQTVHLILSNHILTAESCLDFFHFIRKN----YYK 84
Query: 185 HDLQAYVTI---------GSRLFKDKRFATAKEILNSAAIQGEVKRSLAVTASL 319
DL+AY+T+ +L K ++FA + + N AA+ ++ + V ASL
Sbjct: 85 PDLRAYITLIFKLYRSRKSDKLHKSQKFAEIRHLFNCAAVDDGLRVPVTVIASL 138
>ref|XP_002879404.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297325243|gb|EFH55663.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 605
Score = 67.0 bits (162), Expect = 3e-09
Identities = 37/85 (43%), Positives = 53/85 (62%), Gaps = 1/85 (1%)
Frame = +2
Query: 44 LQPTSRLICNLNANIVHLVLSSPRLKTRACLSFFNFLNNNRDF-SSYKHDLQAYVTIGSR 220
LQ L+ NLN+N+ LVLS P L T++C+ FF FL R+F S+ K DL A VT+ R
Sbjct: 31 LQSNPSLLFNLNSNVTRLVLSDPSLATQSCIDFFKFL---REFESNLKPDLTAVVTLSHR 87
Query: 221 LFKDKRFATAKEILNSAAIQGEVKR 295
L+ ++RF+ + +LNS G +R
Sbjct: 88 LYSNRRFSEMRLLLNSVVNDGFYER 112
>emb|CBI32762.3| unnamed protein product [Vitis vinifera]
Length = 648
Score = 67.0 bits (162), Expect = 3e-09
Identities = 41/114 (35%), Positives = 63/114 (55%), Gaps = 9/114 (7%)
Frame = +2
Query: 5 VCKALVHSNIESLLQPTSRLICNLNANIVHLVLSSPRLKTRACLSFFNFLNNNRDFSSYK 184
+ K LV S +SL Q T L+ +LN+ VHL+LS+ L +CL FF+F+ N YK
Sbjct: 34 ISKTLVSSGAKSL-QTTPSLLSSLNSQTVHLILSNHILTAESCLDFFHFIRKN----YYK 88
Query: 185 HDLQAYVTI---------GSRLFKDKRFATAKEILNSAAIQGEVKRSLAVTASL 319
DL+AY+T+ +L K ++FA + + N AA+ ++ + V ASL
Sbjct: 89 PDLRAYITLIFKLYRSRKSDKLHKSQKFAEIRHLFNCAAVDDGLRVPVTVIASL 142
>ref|XP_006296491.1| hypothetical protein CARUB_v10025677mg [Capsella rubella]
gi|482565199|gb|EOA29389.1| hypothetical protein
CARUB_v10025677mg [Capsella rubella]
Length = 627
Score = 65.9 bits (159), Expect = 6e-09
Identities = 36/93 (38%), Positives = 53/93 (56%)
Frame = +2
Query: 17 LVHSNIESLLQPTSRLICNLNANIVHLVLSSPRLKTRACLSFFNFLNNNRDFSSYKHDLQ 196
LV + LQ L+ NLN+N+ LVLS P L T++C+ FF +L S+ K DL
Sbjct: 44 LVDKSSIGKLQSNPSLLFNLNSNVTRLVLSEPTLPTQSCIDFFKYLRGFE--SNLKPDLT 101
Query: 197 AYVTIGSRLFKDKRFATAKEILNSAAIQGEVKR 295
A VT+ RL+ ++RF+ + +LNS G +R
Sbjct: 102 AVVTLAHRLYSNRRFSEMRALLNSVVNDGFYER 134
>ref|XP_002534209.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223525704|gb|EEF28173.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 491
Score = 65.9 bits (159), Expect = 6e-09
Identities = 31/90 (34%), Positives = 58/90 (64%)
Frame = +2
Query: 11 KALVHSNIESLLQPTSRLICNLNANIVHLVLSSPRLKTRACLSFFNFLNNNRDFSSYKHD 190
+ + +S ++L+ P+S ++ +LN + +LS+P CL FFNF+ N+ S++ D
Sbjct: 23 QGIPYSISKTLISPSSTVLSDLNPTKLQQILSNPLHNPLKCLCFFNFIVKNQSLISFEPD 82
Query: 191 LQAYVTIGSRLFKDKRFATAKEILNSAAIQ 280
LQAY+T+ SRL + ++F+ A+ +L S +I+
Sbjct: 83 LQAYLTLISRLLEARKFSDAENLLKSVSIE 112
>ref|XP_004240667.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g28050-like [Solanum lycopersicum]
Length = 194
Score = 63.5 bits (153), Expect = 3e-08
Identities = 28/86 (32%), Positives = 52/86 (60%)
Frame = +2
Query: 5 VCKALVHSNIESLLQPTSRLICNLNANIVHLVLSSPRLKTRACLSFFNFLNNNRDFSSYK 184
+ ++++ + ++ S L+ NL N++HL+LS P + T CL FFNFL N+ F ++K
Sbjct: 29 IADTIINAVLNPIVIAPSTLLSNLTPNLIHLILSDPHINTPKCLHFFNFLLLNQSFITFK 88
Query: 185 HDLQAYVTIGSRLFKDKRFATAKEIL 262
++ ++T+ RL K+ F A+ +L
Sbjct: 89 IGVETHLTLACRLVKEGYFEYAETLL 114
>ref|XP_004172591.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g32630-like, partial [Cucumis sativus]
Length = 602
Score = 63.5 bits (153), Expect = 3e-08
Identities = 34/96 (35%), Positives = 56/96 (58%)
Frame = +2
Query: 2 NVCKALVHSNIESLLQPTSRLICNLNANIVHLVLSSPRLKTRACLSFFNFLNNNRDFSSY 181
N+ K ++ S ++ + T L+ N ++ ++ LVLS P L TR+CL FF+FL N S
Sbjct: 5 NIAKLILKSGLQPF-KTTPSLLSNFDSRVMQLVLSDPNLPTRSCLRFFDFLRQN---PSR 60
Query: 182 KHDLQAYVTIGSRLFKDKRFATAKEILNSAAIQGEV 289
K DL A++ + SRL++ ++FA K +L G +
Sbjct: 61 KPDLPAHLILFSRLYRARKFAEMKNVLKFIVNDGNL 96
>ref|XP_004137973.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g32630-like [Cucumis sativus]
Length = 606
Score = 63.5 bits (153), Expect = 3e-08
Identities = 34/96 (35%), Positives = 56/96 (58%)
Frame = +2
Query: 2 NVCKALVHSNIESLLQPTSRLICNLNANIVHLVLSSPRLKTRACLSFFNFLNNNRDFSSY 181
N+ K ++ S ++ + T L+ N ++ ++ LVLS P L TR+CL FF+FL N S
Sbjct: 9 NIAKLILKSGLQPF-KTTPSLLSNFDSRVMQLVLSDPNLPTRSCLRFFDFLRQN---PSR 64
Query: 182 KHDLQAYVTIGSRLFKDKRFATAKEILNSAAIQGEV 289
K DL A++ + SRL++ ++FA K +L G +
Sbjct: 65 KPDLPAHLILFSRLYRARKFAEMKNVLKFIVNDGNL 100
>ref|XP_006339300.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g32630-like [Solanum tuberosum]
Length = 1090
Score = 63.2 bits (152), Expect = 4e-08
Identities = 33/96 (34%), Positives = 55/96 (57%)
Frame = +2
Query: 29 NIESLLQPTSRLICNLNANIVHLVLSSPRLKTRACLSFFNFLNNNRDFSSYKHDLQAYVT 208
N S + L LN + HLV +P + T++CLSFF FL N+ F + +L++++
Sbjct: 517 NFSSTKKIPPSLTSYLNPQVTHLVFLNPSVPTQSCLSFFKFLQKNQSFE--RPNLESHIA 574
Query: 209 IGSRLFKDKRFATAKEILNSAAIQGEVKRSLAVTAS 316
+ RLFK ++FA AK IL++ A +++ + AS
Sbjct: 575 LFLRLFKARKFAEAKSILHTVASDDSLRKPILEIAS 610
>gb|EXC16187.1| hypothetical protein L484_024357 [Morus notabilis]
Length = 608
Score = 61.6 bits (148), Expect = 1e-07
Identities = 32/81 (39%), Positives = 51/81 (62%)
Frame = +2
Query: 62 LICNLNANIVHLVLSSPRLKTRACLSFFNFLNNNRDFSSYKHDLQAYVTIGSRLFKDKRF 241
L+ +L++ HLVLS PR++ R CLSFFNFL R S+K DL A++ I RL++ ++
Sbjct: 39 LLSDLDSRATHLVLSDPRVRPRYCLSFFNFL---RTTQSHKPDLLAHLAIARRLYEVRQL 95
Query: 242 ATAKEILNSAAIQGEVKRSLA 304
A K ++N A ++R ++
Sbjct: 96 AHMKNVVNFIAADENLRRPVS 116
>ref|XP_002879120.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297324959|gb|EFH55379.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 483
Score = 60.5 bits (145), Expect = 2e-07
Identities = 30/97 (30%), Positives = 54/97 (55%)
Frame = +2
Query: 26 SNIESLLQPTSRLICNLNANIVHLVLSSPRLKTRACLSFFNFLNNNRDFSSYKHDLQAYV 205
S+I L + + +LN + +LS P +K+ C+S FNF+ N S++ DL+ ++
Sbjct: 29 SSINQTLDSSENPLSDLNLSTFRRILSDPDIKSWKCISLFNFILENPSLFSFQPDLRTHL 88
Query: 206 TIGSRLFKDKRFATAKEILNSAAIQGEVKRSLAVTAS 316
++ SR+ ++RF+ AKE+L AI ++ V S
Sbjct: 89 SLTSRVLSERRFSDAKELLKLVAIDDILRYPFKVIVS 125
>ref|XP_007016826.1| Pentatricopeptide repeat-containing protein, putative [Theobroma
cacao] gi|508787189|gb|EOY34445.1| Pentatricopeptide
repeat-containing protein, putative [Theobroma cacao]
Length = 561
Score = 60.1 bits (144), Expect = 3e-07
Identities = 30/84 (35%), Positives = 48/84 (57%)
Frame = +2
Query: 65 ICNLNANIVHLVLSSPRLKTRACLSFFNFLNNNRDFSSYKHDLQAYVTIGSRLFKDKRFA 244
I +LN H +L++P LK C FFN + N+ S+K DLQA++T+ RL K + F+
Sbjct: 142 ISDLNPTTFHDILTNPDLKASKCFRFFNLVIKNQSLVSFKPDLQAHLTLTCRLLKARLFS 201
Query: 245 TAKEILNSAAIQGEVKRSLAVTAS 316
A+ +L S ++ ++ V AS
Sbjct: 202 DAEAMLKSVSVDESLRYPFLVIAS 225