BLASTX nr result

ID: Sinomenium22_contig00048272 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium22_contig00048272
         (500 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006481440.1| PREDICTED: pentatricopeptide repeat-containi...    59   9e-07
ref|XP_006476161.1| PREDICTED: pentatricopeptide repeat-containi...    59   9e-07
ref|XP_006450596.1| hypothetical protein CICLE_v10010742mg [Citr...    59   9e-07
ref|XP_006360941.1| PREDICTED: pentatricopeptide repeat-containi...    58   2e-06
ref|XP_004247963.1| PREDICTED: pentatricopeptide repeat-containi...    58   2e-06
ref|XP_004292867.1| PREDICTED: pentatricopeptide repeat-containi...    57   3e-06
ref|XP_002516590.1| pentatricopeptide repeat-containing protein,...    56   6e-06
gb|EXC32781.1| hypothetical protein L484_019895 [Morus notabilis]      55   8e-06

>ref|XP_006481440.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g20540-like, partial [Citrus sinensis]
          Length = 436

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 28/51 (54%), Positives = 36/51 (70%)
 Frame = -1

Query: 500 CSLIEVNNVVQEFLVGDETNPFSHEIYCILDLLALHQNNTGTANETPMEDI 348
           CSLIEVNN VQEF+ GD+T PF  +I+ +L+LLALHQ+      +   EDI
Sbjct: 384 CSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLALHQDRAKDVIDIMYEDI 434


>ref|XP_006476161.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g20540-like [Citrus sinensis]
          Length = 541

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 28/51 (54%), Positives = 36/51 (70%)
 Frame = -1

Query: 500 CSLIEVNNVVQEFLVGDETNPFSHEIYCILDLLALHQNNTGTANETPMEDI 348
           CSLIEVNN VQEF+ GD+T PF  +I+ +L+LLALHQ+      +   EDI
Sbjct: 489 CSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLALHQDRAKDVIDIMYEDI 539


>ref|XP_006450596.1| hypothetical protein CICLE_v10010742mg [Citrus clementina]
           gi|557553822|gb|ESR63836.1| hypothetical protein
           CICLE_v10010742mg [Citrus clementina]
          Length = 605

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 28/51 (54%), Positives = 36/51 (70%)
 Frame = -1

Query: 500 CSLIEVNNVVQEFLVGDETNPFSHEIYCILDLLALHQNNTGTANETPMEDI 348
           CSLIEVNN VQEF+ GD+T PF  +I+ +L+LLALHQ+      +   EDI
Sbjct: 489 CSLIEVNNEVQEFVSGDDTKPFLKDIFWLLELLALHQDRAKDVIDIMYEDI 539


>ref|XP_006360941.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g20540-like [Solanum tuberosum]
          Length = 536

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 26/49 (53%), Positives = 37/49 (75%)
 Frame = -1

Query: 500 CSLIEVNNVVQEFLVGDETNPFSHEIYCILDLLALHQNNTGTANETPME 354
           CSLIE+N++VQEFL GD + PFS +I+ +L+LLALHQ+      +T +E
Sbjct: 484 CSLIEINSLVQEFLSGDNSKPFSKDIHEVLELLALHQSKENDLVDTTLE 532


>ref|XP_004247963.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g20540-like [Solanum lycopersicum]
          Length = 534

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 26/49 (53%), Positives = 37/49 (75%)
 Frame = -1

Query: 500 CSLIEVNNVVQEFLVGDETNPFSHEIYCILDLLALHQNNTGTANETPME 354
           CSLIE+N++VQEFL GD + PFS +I+ +L+LLALHQ+      +T +E
Sbjct: 482 CSLIEINSLVQEFLSGDNSKPFSKDIHEVLELLALHQSKENDLVDTTLE 530


>ref|XP_004292867.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g20540-like [Fragaria vesca subsp. vesca]
          Length = 544

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 27/50 (54%), Positives = 35/50 (70%)
 Frame = -1

Query: 500 CSLIEVNNVVQEFLVGDETNPFSHEIYCILDLLALHQNNTGTANETPMED 351
           CSLIEVNNVV EF+ GD+T PF+ +I+ +L LL  HQ+  G + E   ED
Sbjct: 489 CSLIEVNNVVLEFVSGDDTKPFAKDIFSMLQLLVAHQSMPGESIEAVPED 538


>ref|XP_002516590.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223544410|gb|EEF45931.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 517

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 24/38 (63%), Positives = 32/38 (84%)
 Frame = -1

Query: 500 CSLIEVNNVVQEFLVGDETNPFSHEIYCILDLLALHQN 387
           CSLIEVNNV QEF+ GD++ P+S EI+ +L+LLA HQ+
Sbjct: 467 CSLIEVNNVAQEFVSGDDSKPYSKEIFWLLELLAFHQD 504


>gb|EXC32781.1| hypothetical protein L484_019895 [Morus notabilis]
          Length = 549

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 29/56 (51%), Positives = 38/56 (67%), Gaps = 5/56 (8%)
 Frame = -1

Query: 500 CSLIEVNNVVQEFLVGDETNPFSHEIYCILDLLALHQNNT-----GTANETPMEDI 348
           CSLIEVNNVV+EF+ GD+T P S +++ +L+LL  HQN T     G A+E   E I
Sbjct: 491 CSLIEVNNVVEEFVSGDDTKPCSKDLFSMLELLVSHQNVTNKDMIGIASEDCSESI 546


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