BLASTX nr result

ID: Sinomenium22_contig00048234 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium22_contig00048234
         (323 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15304.3| unnamed protein product [Vitis vinifera]               62   8e-08
ref|XP_007099748.1| Basic helix-loop-helix DNA-binding superfami...    61   2e-07
ref|XP_004299622.1| PREDICTED: transcription factor bHLH79-like ...    57   4e-06
ref|XP_002511487.1| DNA binding protein, putative [Ricinus commu...    57   4e-06
ref|XP_002267823.1| PREDICTED: transcription factor bHLH79 isofo...    56   5e-06
ref|XP_002267633.1| PREDICTED: transcription factor bHLH79 isofo...    56   5e-06
emb|CAN75381.1| hypothetical protein VITISV_027596 [Vitis vinifera]    56   5e-06

>emb|CBI15304.3| unnamed protein product [Vitis vinifera]
          Length = 269

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 44/116 (37%), Positives = 62/116 (53%), Gaps = 9/116 (7%)
 Frame = +3

Query: 3   ASFPSSNAASYGLAEIWPFVV-----IGDG-GELGWNLSRNGSVDGSTVTXXXXXXXXXX 164
           +SF ++N ++Y LAEIWPF V     IG+    L  + +R+ SVD STVT          
Sbjct: 9   SSFSAANPSAYSLAEIWPFPVNSASAIGEPTAGLDSSANRDVSVDESTVTEQSGSRGGGR 68

Query: 165 XXXXXXXXXX---LVSTSSGNEMNACDARCPKVTGFSEENGDSKTEMEGSSRSGSK 323
                        +VSTSSG+ MNA + +  K++   +ENG SK E+E SS +G K
Sbjct: 69  KRRDVSSEDESSKIVSTSSGSGMNASNGKRMKISRTPDENGGSKAELEASSVAGEK 124


>ref|XP_007099748.1| Basic helix-loop-helix DNA-binding superfamily protein [Theobroma
           cacao] gi|508728396|gb|EOY20293.1| Basic
           helix-loop-helix DNA-binding superfamily protein
           [Theobroma cacao]
          Length = 283

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 42/128 (32%), Positives = 60/128 (46%), Gaps = 21/128 (16%)
 Frame = +3

Query: 3   ASFPSSNAASYGLAEIWPFVV-------IGDGGELGWNLS-----------RNGSVDGST 128
           +SF ++N +SY LAEIWPF +       +   G LG  +            R+GS++ ST
Sbjct: 9   SSFSAANPSSYSLAEIWPFPINPRSDPNVATAGRLGVRMGNLGGFGESSGHRDGSMEEST 68

Query: 129 VTXXXXXXXXXXXXXXXXXXXX---LVSTSSGNEMNACDARCPKVTGFSEENGDSKTEME 299
           VT                       +VST+S NE+N  + +  K +    EN DSK E+E
Sbjct: 69  VTEQSVGCGGRRKRKDLSSEDESSKIVSTTSANELNDSNGKRMKSSSTKNENADSKAELE 128

Query: 300 GSSRSGSK 323
            SS +GSK
Sbjct: 129 ASSAAGSK 136


>ref|XP_004299622.1| PREDICTED: transcription factor bHLH79-like [Fragaria vesca subsp.
           vesca]
          Length = 274

 Score = 56.6 bits (135), Expect = 4e-06
 Identities = 42/120 (35%), Positives = 57/120 (47%), Gaps = 13/120 (10%)
 Frame = +3

Query: 3   ASFPSSNAASYGLAEIWPFVVIGDGGELGWNL------------SRNGSVDGSTVTXXXX 146
           ASF + N A+Y LAEIWPF   G+ G LG  +            +R+GS++ STVT    
Sbjct: 9   ASFSAVNPAAYSLAEIWPFG--GEPGGLGLRMGSLGGGLGESSGNRDGSLEESTVTEQSG 66

Query: 147 XXXXXXXXXXXXXXXX-LVSTSSGNEMNACDARCPKVTGFSEENGDSKTEMEGSSRSGSK 323
                            +VSTSS + +     +  K+ G   ENG SK E+E SS +G K
Sbjct: 67  GGGRKRKDVSSEDESSKIVSTSSADGLKDSSGKRMKLEGARNENGKSKAEVETSSEAGDK 126


>ref|XP_002511487.1| DNA binding protein, putative [Ricinus communis]
           gi|223550602|gb|EEF52089.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 275

 Score = 56.6 bits (135), Expect = 4e-06
 Identities = 40/113 (35%), Positives = 53/113 (46%), Gaps = 12/113 (10%)
 Frame = +3

Query: 6   SFPSSNAASYGLAEIWPFVVIGDGGELGWNL----------SRNGSVDGSTVTXXXXXXX 155
           SF ++N +SY L EIWPF  +      G  L           R+GSV+ STVT       
Sbjct: 10  SFSAANPSSYTLTEIWPFSALNGDASAGLGLRVGNLSAGFGERDGSVEESTVTEQSVGGG 69

Query: 156 XXXXXXXXXXXXX-LVSTSS-GNEMNACDARCPKVTGFSEENGDSKTEMEGSS 308
                         +VSTSS GNE+   + +  K++G   ENG SK E+E SS
Sbjct: 70  RKRRDFSSEDESSKMVSTSSSGNELQDSNVKRMKISGSQNENGKSKAEVEASS 122


>ref|XP_002267823.1| PREDICTED: transcription factor bHLH79 isoform 2 [Vitis vinifera]
          Length = 262

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 43/131 (32%), Positives = 63/131 (48%), Gaps = 24/131 (18%)
 Frame = +3

Query: 3   ASFPSSNAASYGLAEIWPFVV----------------IGDGGEL-----GWNLSRNGSVD 119
           +SF ++N ++Y LAEIWPF V                I + G++       + +R+ SVD
Sbjct: 9   SSFSAANPSAYSLAEIWPFPVNSASAIGEPTAGLGLRIANFGQIMGQFADSSANRDVSVD 68

Query: 120 GSTVTXXXXXXXXXXXXXXXXXXXX---LVSTSSGNEMNACDARCPKVTGFSEENGDSKT 290
            STVT                       +VSTSSG+ MNA + +  K++   +ENG SK 
Sbjct: 69  ESTVTEQSGSRGGGRKRRDVSSEDESSKIVSTSSGSGMNASNGKRMKISRTPDENGGSKA 128

Query: 291 EMEGSSRSGSK 323
           E+E SS +G K
Sbjct: 129 ELEASSVAGEK 139


>ref|XP_002267633.1| PREDICTED: transcription factor bHLH79 isoform 1 [Vitis vinifera]
          Length = 284

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 43/131 (32%), Positives = 63/131 (48%), Gaps = 24/131 (18%)
 Frame = +3

Query: 3   ASFPSSNAASYGLAEIWPFVV----------------IGDGGEL-----GWNLSRNGSVD 119
           +SF ++N ++Y LAEIWPF V                I + G++       + +R+ SVD
Sbjct: 9   SSFSAANPSAYSLAEIWPFPVNSASAIGEPTAGLGLRIANFGQIMGQFADSSANRDVSVD 68

Query: 120 GSTVTXXXXXXXXXXXXXXXXXXXX---LVSTSSGNEMNACDARCPKVTGFSEENGDSKT 290
            STVT                       +VSTSSG+ MNA + +  K++   +ENG SK 
Sbjct: 69  ESTVTEQSGSRGGGRKRRDVSSEDESSKIVSTSSGSGMNASNGKRMKISRTPDENGGSKA 128

Query: 291 EMEGSSRSGSK 323
           E+E SS +G K
Sbjct: 129 ELEASSVAGEK 139


>emb|CAN75381.1| hypothetical protein VITISV_027596 [Vitis vinifera]
          Length = 328

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 43/131 (32%), Positives = 63/131 (48%), Gaps = 24/131 (18%)
 Frame = +3

Query: 3   ASFPSSNAASYGLAEIWPFVV----------------IGDGGEL-----GWNLSRNGSVD 119
           +SF ++N ++Y LAEIWPF V                I + G++       + +R+ SVD
Sbjct: 9   SSFSAANPSAYSLAEIWPFPVNSASAIGEPTAGLGLRIANFGQIMGQFADSSANRDVSVD 68

Query: 120 GSTVTXXXXXXXXXXXXXXXXXXXX---LVSTSSGNEMNACDARCPKVTGFSEENGDSKT 290
            STVT                       +VSTSSG+ MNA + +  K++   +ENG SK 
Sbjct: 69  ESTVTEQSGSRGGGRKRRDVSSEDESSKIVSTSSGSGMNASNGKRMKISRTPDENGGSKA 128

Query: 291 EMEGSSRSGSK 323
           E+E SS +G K
Sbjct: 129 ELEASSVAGEK 139


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