BLASTX nr result

ID: Sinomenium22_contig00048110 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium22_contig00048110
         (464 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_002836148.1| hypothetical chloroplast RF1 [Megaleranthis ...    42   8e-06

>ref|YP_002836148.1| hypothetical chloroplast RF1 [Megaleranthis saniculifolia]
            gi|226933940|gb|ACO92073.1| hypothetical chloroplast RF1
            [Megaleranthis saniculifolia]
          Length = 1774

 Score = 42.0 bits (97), Expect(2) = 8e-06
 Identities = 20/34 (58%), Positives = 27/34 (79%)
 Frame = +2

Query: 53   YRYDLLSHKHMNHADIRIKDSNLYGSPLQRNEVR 154
            Y+YDLLS+K++N+ D   K S++YGSP Q NEVR
Sbjct: 1329 YKYDLLSNKYINYED--KKGSDIYGSPFQVNEVR 1360



 Score = 33.1 bits (74), Expect(2) = 8e-06
 Identities = 11/17 (64%), Positives = 14/17 (82%)
 Frame = +3

Query: 162  YDYNTYKPDFFYAPGDV 212
            Y+YNTY  +FFY PGD+
Sbjct: 1369 YNYNTYNTEFFYLPGDI 1385


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