BLASTX nr result
ID: Sinomenium22_contig00047791
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium22_contig00047791
(531 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAZ03868.1| RNA polymerase alpha chain [Ranunculus macranthus] 315 3e-84
ref|YP_001004218.1| RNA polymerase alpha subunit [Ranunculus mac... 315 3e-84
ref|YP_740682.1| RNA polymerase alpha subunit [Nandina domestica... 313 1e-83
gb|ADD31229.1| RNA polymerase alpha subunit protein [Heuchera sa... 312 4e-83
ref|YP_002836122.1| RNA polymerase alpha subunit [Megaleranthis ... 312 4e-83
gb|ADD31223.1| RNA polymerase alpha subunit protein [Berberidops... 311 5e-83
ref|YP_004563899.1| RNA polymerase alpha subunit [Nelumbo lutea]... 311 6e-83
ref|YP_008993896.1| RNA polymerase alpha subunit (chloroplast) [... 310 1e-82
gb|ADD31217.1| RNA polymerase alpha subunit protein [Meliosma af... 310 1e-82
ref|YP_004564135.1| RNA polymerase alpha subunit [Nelumbo nucife... 310 1e-82
gb|ADD31228.1| RNA polymerase alpha subunit protein [Gunnera man... 308 5e-82
ref|YP_006576146.1| RpoA (chloroplast) [Magnolia denudata] gi|57... 307 9e-82
ref|YP_008993466.1| RNA polymerase alpha subunit (chloroplast) [... 306 2e-81
ref|YP_008993380.1| RNA polymerase alpha subunit (chloroplast) [... 306 3e-81
ref|YP_007474568.1| RNA polymerase alpha subunit (chloroplast) [... 306 3e-81
ref|YP_007474402.1| RNA polymerase alpha subunit (chloroplast) [... 306 3e-81
ref|YP_319795.1| RNA polymerase alpha subunit [Acorus calamus] g... 306 3e-81
sp|Q5QA74.1|RPOA_ACOGR RecName: Full=DNA-directed RNA polymerase... 306 3e-81
gb|ADM92734.1| RNA polymerase alpha subunit protein [Davidia inv... 305 3e-81
ref|YP_008081489.1| RNA polymerase alpha subunit (chloroplast) [... 304 7e-81
>gb|AAZ03868.1| RNA polymerase alpha chain [Ranunculus macranthus]
Length = 339
Score = 315 bits (808), Expect = 3e-84
Identities = 154/177 (87%), Positives = 161/177 (90%), Gaps = 1/177 (0%)
Frame = -2
Query: 530 ASLTEPIDFCIGLQIERNRGYRTKTPNNAQNGSYPIDAVFMPVRNANYSIHSYGNGNEKQ 351
ASLTEP+DFCIGLQIE NRGYR KTPNNAQ GSYPIDAVFMPVRNAN+SIHSYGNGNE Q
Sbjct: 137 ASLTEPVDFCIGLQIESNRGYRMKTPNNAQKGSYPIDAVFMPVRNANHSIHSYGNGNENQ 196
Query: 350 EILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHAEEQDINFEDNQKKATLTP-FTFHD 174
EILFLEIWTNGSLTPKEAL+EASRNLIDLFIPFLHAEEQD N +DNQK P FTFHD
Sbjct: 197 EILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEQDQNLKDNQKNGVTLPFFTFHD 256
Query: 173 GLAKLRKNKKEIALKCIFIDQLELPSRTYNCLKKSNIHTLLDLLNKSQEDLMKIEHF 3
G KL+KNKKEI LKCIFIDQ ELPSRTYNCLK++NIHTLLDLLNKSQEDLMKIEHF
Sbjct: 257 GFDKLKKNKKEIELKCIFIDQSELPSRTYNCLKRANIHTLLDLLNKSQEDLMKIEHF 313
>ref|YP_001004218.1| RNA polymerase alpha subunit [Ranunculus macranthus]
gi|158514028|sp|A1XGS0.1|RPOA_RANMC RecName:
Full=DNA-directed RNA polymerase subunit alpha;
Short=PEP; AltName: Full=Plastid-encoded RNA polymerase
subunit alpha; Short=RNA polymerase subunit alpha
gi|85540836|gb|ABC70788.1| RNA polymerase alpha subunit
[Ranunculus macranthus]
Length = 346
Score = 315 bits (808), Expect = 3e-84
Identities = 154/177 (87%), Positives = 161/177 (90%), Gaps = 1/177 (0%)
Frame = -2
Query: 530 ASLTEPIDFCIGLQIERNRGYRTKTPNNAQNGSYPIDAVFMPVRNANYSIHSYGNGNEKQ 351
ASLTEP+DFCIGLQIE NRGYR KTPNNAQ GSYPIDAVFMPVRNAN+SIHSYGNGNE Q
Sbjct: 137 ASLTEPVDFCIGLQIESNRGYRMKTPNNAQKGSYPIDAVFMPVRNANHSIHSYGNGNENQ 196
Query: 350 EILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHAEEQDINFEDNQKKATLTP-FTFHD 174
EILFLEIWTNGSLTPKEAL+EASRNLIDLFIPFLHAEEQD N +DNQK P FTFHD
Sbjct: 197 EILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEQDQNLKDNQKNGVTLPFFTFHD 256
Query: 173 GLAKLRKNKKEIALKCIFIDQLELPSRTYNCLKKSNIHTLLDLLNKSQEDLMKIEHF 3
G KL+KNKKEI LKCIFIDQ ELPSRTYNCLK++NIHTLLDLLNKSQEDLMKIEHF
Sbjct: 257 GFDKLKKNKKEIELKCIFIDQSELPSRTYNCLKRANIHTLLDLLNKSQEDLMKIEHF 313
>ref|YP_740682.1| RNA polymerase alpha subunit [Nandina domestica]
gi|122165930|sp|Q09FS9.1|RPOA_NANDO RecName:
Full=DNA-directed RNA polymerase subunit alpha;
Short=PEP; AltName: Full=Plastid-encoded RNA polymerase
subunit alpha; Short=RNA polymerase subunit alpha
gi|114054503|gb|ABI49896.1| RNA polymerase alpha subunit
[Nandina domestica]
Length = 338
Score = 313 bits (803), Expect = 1e-83
Identities = 157/176 (89%), Positives = 162/176 (92%)
Frame = -2
Query: 530 ASLTEPIDFCIGLQIERNRGYRTKTPNNAQNGSYPIDAVFMPVRNANYSIHSYGNGNEKQ 351
ASLTEP D CIGLQIERNRGYR KTPN AQNGSYPIDAVFMPVRNAN+SIHSYGNGNEKQ
Sbjct: 137 ASLTEPFDLCIGLQIERNRGYRMKTPNKAQNGSYPIDAVFMPVRNANHSIHSYGNGNEKQ 196
Query: 350 EILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHAEEQDINFEDNQKKATLTPFTFHDG 171
EILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHAEEQDI EDNQ + TL FTFHDG
Sbjct: 197 EILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHAEEQDIILEDNQNRVTLPFFTFHDG 256
Query: 170 LAKLRKNKKEIALKCIFIDQLELPSRTYNCLKKSNIHTLLDLLNKSQEDLMKIEHF 3
LAKL+K K EIALK IFIDQ ELPSRTYNCLKKSNI+TLLDLLNKSQEDL+KIEHF
Sbjct: 257 LAKLKK-KNEIALKFIFIDQSELPSRTYNCLKKSNINTLLDLLNKSQEDLLKIEHF 311
>gb|ADD31229.1| RNA polymerase alpha subunit protein [Heuchera sanguinea]
Length = 337
Score = 312 bits (799), Expect = 4e-83
Identities = 153/176 (86%), Positives = 161/176 (91%)
Frame = -2
Query: 530 ASLTEPIDFCIGLQIERNRGYRTKTPNNAQNGSYPIDAVFMPVRNANYSIHSYGNGNEKQ 351
ASLTEPID CIGLQIE+NRGYR KTPNN Q+GSYPIDAVFMPVRNAN+SIHSYGNGNEKQ
Sbjct: 137 ASLTEPIDLCIGLQIEKNRGYRIKTPNNFQDGSYPIDAVFMPVRNANHSIHSYGNGNEKQ 196
Query: 350 EILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHAEEQDINFEDNQKKATLTPFTFHDG 171
EILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHAEE++++ EDNQ K TL FTFHD
Sbjct: 197 EILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHAEEENLHLEDNQHKVTLPLFTFHDR 256
Query: 170 LAKLRKNKKEIALKCIFIDQLELPSRTYNCLKKSNIHTLLDLLNKSQEDLMKIEHF 3
LAKLRKNKKEIALK IFIDQ ELP R Y CLK+SNIHTLLDLLN SQEDLMKIEHF
Sbjct: 257 LAKLRKNKKEIALKYIFIDQSELPPRIYTCLKRSNIHTLLDLLNNSQEDLMKIEHF 312
>ref|YP_002836122.1| RNA polymerase alpha subunit [Megaleranthis saniculifolia]
gi|226933914|gb|ACO92047.1| RNA polymerase alpha subunit
[Megaleranthis saniculifolia]
Length = 328
Score = 312 bits (799), Expect = 4e-83
Identities = 153/176 (86%), Positives = 160/176 (90%)
Frame = -2
Query: 530 ASLTEPIDFCIGLQIERNRGYRTKTPNNAQNGSYPIDAVFMPVRNANYSIHSYGNGNEKQ 351
ASLTEPID CI LQIERNRGYR KTPNNAQ SYPIDAVFMPVRNAN+SIHSYGNGNEKQ
Sbjct: 137 ASLTEPIDLCIELQIERNRGYRMKTPNNAQERSYPIDAVFMPVRNANHSIHSYGNGNEKQ 196
Query: 350 EILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHAEEQDINFEDNQKKATLTPFTFHDG 171
EILFLEIWT+GSLTPKEAL+EASRNLIDLFIPFLHAEEQD EDNQ + TL FTFHDG
Sbjct: 197 EILFLEIWTDGSLTPKEALYEASRNLIDLFIPFLHAEEQDTKLEDNQSRVTLPFFTFHDG 256
Query: 170 LAKLRKNKKEIALKCIFIDQLELPSRTYNCLKKSNIHTLLDLLNKSQEDLMKIEHF 3
L K+RKNKKEI LKCIFIDQ ELPSRTYNCLK+ NIHTLLDLLNKSQEDLMK+EHF
Sbjct: 257 LDKVRKNKKEIELKCIFIDQSELPSRTYNCLKRFNIHTLLDLLNKSQEDLMKMEHF 312
>gb|ADD31223.1| RNA polymerase alpha subunit protein [Berberidopsis corallina]
Length = 337
Score = 311 bits (798), Expect = 5e-83
Identities = 154/176 (87%), Positives = 161/176 (91%)
Frame = -2
Query: 530 ASLTEPIDFCIGLQIERNRGYRTKTPNNAQNGSYPIDAVFMPVRNANYSIHSYGNGNEKQ 351
ASLTEPID CIGLQIERNRGYR KT NN Q+GSYPIDAVFMPVRNAN+SIHSYGNGNEKQ
Sbjct: 137 ASLTEPIDLCIGLQIERNRGYRIKTLNNFQDGSYPIDAVFMPVRNANHSIHSYGNGNEKQ 196
Query: 350 EILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHAEEQDINFEDNQKKATLTPFTFHDG 171
EILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHAEE++++ EDNQ KAT FTFHD
Sbjct: 197 EILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHAEEENLHLEDNQHKATFPLFTFHDR 256
Query: 170 LAKLRKNKKEIALKCIFIDQLELPSRTYNCLKKSNIHTLLDLLNKSQEDLMKIEHF 3
LAKLRKNKKEIALK IFIDQLELP R YNCLK+SNIHTL DLLN SQEDLMKIEHF
Sbjct: 257 LAKLRKNKKEIALKYIFIDQLELPPRIYNCLKRSNIHTLSDLLNNSQEDLMKIEHF 312
>ref|YP_004563899.1| RNA polymerase alpha subunit [Nelumbo lutea]
gi|224474167|gb|ACN49356.1| RNA polymerase alpha subunit
[Nelumbo lutea] gi|383286921|gb|AFH01570.1| RNA
polymerase alpha subunit (chloroplast) [Nelumbo lutea]
Length = 339
Score = 311 bits (797), Expect = 6e-83
Identities = 154/178 (86%), Positives = 162/178 (91%), Gaps = 2/178 (1%)
Frame = -2
Query: 530 ASLTEPIDFCIGLQIERNRGYRTKTPNNAQNGSYPIDAVFMPVRNANYSIHSYGNGNEKQ 351
ASLTEPID CIGLQIERNRGYR KTPNN+Q+GSYPIDAVFMPVRNAN+SIHSYGNGNEKQ
Sbjct: 137 ASLTEPIDLCIGLQIERNRGYRMKTPNNSQDGSYPIDAVFMPVRNANHSIHSYGNGNEKQ 196
Query: 350 EILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHAEEQDINFEDNQKKATLTPFTFHDG 171
EILFLEIWTNGSLTPKEALHEASRNLI+LFIPFL A+E+DI EDNQ K TL FTFHD
Sbjct: 197 EILFLEIWTNGSLTPKEALHEASRNLINLFIPFLDAQEEDIQLEDNQNKVTLPFFTFHDR 256
Query: 170 LAKLRKNK--KEIALKCIFIDQLELPSRTYNCLKKSNIHTLLDLLNKSQEDLMKIEHF 3
L KLRKNK KEIALKCIFIDQ ELP RTYNCLK+SNIHTLLDLLN SQEDLMK+EHF
Sbjct: 257 LTKLRKNKKEKEIALKCIFIDQSELPPRTYNCLKRSNIHTLLDLLNNSQEDLMKMEHF 314
>ref|YP_008993896.1| RNA polymerase alpha subunit (chloroplast) [Magnolia sprengeri]
Length = 337
Score = 310 bits (794), Expect = 1e-82
Identities = 151/176 (85%), Positives = 160/176 (90%)
Frame = -2
Query: 530 ASLTEPIDFCIGLQIERNRGYRTKTPNNAQNGSYPIDAVFMPVRNANYSIHSYGNGNEKQ 351
ASLTEPID CI LQIER+RGYR KTPNN Q+GSYPIDAV MPVRNAN+SIHSYGNGNEKQ
Sbjct: 137 ASLTEPIDLCIELQIERDRGYRMKTPNNYQDGSYPIDAVSMPVRNANHSIHSYGNGNEKQ 196
Query: 350 EILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHAEEQDINFEDNQKKATLTPFTFHDG 171
EILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHAEEQDIN EDN + T+ PFTFHD
Sbjct: 197 EILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHAEEQDINLEDNPNRFTVPPFTFHDR 256
Query: 170 LAKLRKNKKEIALKCIFIDQLELPSRTYNCLKKSNIHTLLDLLNKSQEDLMKIEHF 3
LA +RKNKK IALKCIFIDQ ELP RTYNCLK+SNIHTLLDLL+ SQEDLM+IEHF
Sbjct: 257 LANIRKNKKGIALKCIFIDQSELPPRTYNCLKRSNIHTLLDLLSNSQEDLMRIEHF 312
>gb|ADD31217.1| RNA polymerase alpha subunit protein [Meliosma aff. cuneifolia
Moore 333]
Length = 337
Score = 310 bits (794), Expect = 1e-82
Identities = 152/176 (86%), Positives = 161/176 (91%)
Frame = -2
Query: 530 ASLTEPIDFCIGLQIERNRGYRTKTPNNAQNGSYPIDAVFMPVRNANYSIHSYGNGNEKQ 351
ASLTEPI+ CIGLQIERN GYR KTP N+Q+GSYPIDAVFMPVRNAN+SIHSYGNGNEKQ
Sbjct: 137 ASLTEPINLCIGLQIERNHGYRMKTPKNSQDGSYPIDAVFMPVRNANHSIHSYGNGNEKQ 196
Query: 350 EILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHAEEQDINFEDNQKKATLTPFTFHDG 171
EILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLH EE+DI EDNQ + T+ FTFHD
Sbjct: 197 EILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHTEEEDIIIEDNQNRFTVPFFTFHDR 256
Query: 170 LAKLRKNKKEIALKCIFIDQLELPSRTYNCLKKSNIHTLLDLLNKSQEDLMKIEHF 3
LAKLRKNKKEIALK IFIDQ ELP RTYNCLK+SNIHTLLDLLNKSQEDLM+IEHF
Sbjct: 257 LAKLRKNKKEIALKFIFIDQSELPPRTYNCLKRSNIHTLLDLLNKSQEDLMRIEHF 312
>ref|YP_004564135.1| RNA polymerase alpha subunit [Nelumbo nucifera]
gi|224474255|gb|ACN49441.1| RNA polymerase alpha subunit
[Nelumbo nucifera] gi|290489668|gb|ADD31218.1| RNA
polymerase alpha subunit protein [Nelumbo nucifera]
gi|383286829|gb|AFH01479.1| RNA polymerase alpha subunit
(chloroplast) [Nelumbo nucifera]
gi|519666943|gb|AGO98555.1| RNA polymerase alpha subunit
(chloroplast) [Nelumbo nucifera]
Length = 339
Score = 310 bits (794), Expect = 1e-82
Identities = 154/178 (86%), Positives = 161/178 (90%), Gaps = 2/178 (1%)
Frame = -2
Query: 530 ASLTEPIDFCIGLQIERNRGYRTKTPNNAQNGSYPIDAVFMPVRNANYSIHSYGNGNEKQ 351
ASLTEPID CIGLQIERNRGYR KTPNN+Q+GSYPIDAVFMPVRNAN+SIHSYGNGNEKQ
Sbjct: 137 ASLTEPIDLCIGLQIERNRGYRMKTPNNSQDGSYPIDAVFMPVRNANHSIHSYGNGNEKQ 196
Query: 350 EILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHAEEQDINFEDNQKKATLTPFTFHDG 171
EILFLEIWTNGSLTPKEALHEASRNLIDLFIPFL A+E+DI EDNQ K TL FTFHD
Sbjct: 197 EILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLDAQEEDIQLEDNQNKVTLPFFTFHDR 256
Query: 170 LAKLRKNK--KEIALKCIFIDQLELPSRTYNCLKKSNIHTLLDLLNKSQEDLMKIEHF 3
L KLRKNK KEIALKCIFIDQ ELP RTYNCLK+SNIHTLLDLLN SQEDLMK+ HF
Sbjct: 257 LTKLRKNKKEKEIALKCIFIDQSELPPRTYNCLKRSNIHTLLDLLNNSQEDLMKMFHF 314
>gb|ADD31228.1| RNA polymerase alpha subunit protein [Gunnera manicata]
Length = 330
Score = 308 bits (789), Expect = 5e-82
Identities = 152/176 (86%), Positives = 160/176 (90%)
Frame = -2
Query: 530 ASLTEPIDFCIGLQIERNRGYRTKTPNNAQNGSYPIDAVFMPVRNANYSIHSYGNGNEKQ 351
ASLTEPID CI LQIE+NRGYR KTPN Q+GSYPIDAVFMPVRNAN+SIHSYGNG EKQ
Sbjct: 137 ASLTEPIDLCIQLQIEKNRGYRIKTPNTYQDGSYPIDAVFMPVRNANHSIHSYGNGKEKQ 196
Query: 350 EILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHAEEQDINFEDNQKKATLTPFTFHDG 171
EILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHAEE++++ EDNQ K TL FTFHD
Sbjct: 197 EILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHAEEENLHLEDNQYKVTLPFFTFHDR 256
Query: 170 LAKLRKNKKEIALKCIFIDQLELPSRTYNCLKKSNIHTLLDLLNKSQEDLMKIEHF 3
LAKLRKNKKEIALK IFIDQ ELPSRTYNCLK SNIHTLLDLLN SQEDLMKI+HF
Sbjct: 257 LAKLRKNKKEIALKSIFIDQSELPSRTYNCLKSSNIHTLLDLLNNSQEDLMKIKHF 312
>ref|YP_006576146.1| RpoA (chloroplast) [Magnolia denudata]
gi|570760131|ref|YP_008993552.1| RNA polymerase alpha
subunit (chloroplast) [Magnolia liliifera]
gi|343887570|gb|AEM65249.1| RpoA [Magnolia denudata]
gi|372862283|gb|AEX98366.1| RNA polymerase alpha subunit
(chloroplast) [Magnolia denudata]
Length = 337
Score = 307 bits (787), Expect = 9e-82
Identities = 150/176 (85%), Positives = 159/176 (90%)
Frame = -2
Query: 530 ASLTEPIDFCIGLQIERNRGYRTKTPNNAQNGSYPIDAVFMPVRNANYSIHSYGNGNEKQ 351
ASLTEPID CI LQIER+RGYR KTPNN Q+GSYPIDAV MPVRNAN+SIHSYGNGNEKQ
Sbjct: 137 ASLTEPIDLCIELQIERDRGYRMKTPNNYQDGSYPIDAVSMPVRNANHSIHSYGNGNEKQ 196
Query: 350 EILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHAEEQDINFEDNQKKATLTPFTFHDG 171
EILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHAEEQD N EDN + T+ PFTFHD
Sbjct: 197 EILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHAEEQDRNLEDNPNRFTVPPFTFHDR 256
Query: 170 LAKLRKNKKEIALKCIFIDQLELPSRTYNCLKKSNIHTLLDLLNKSQEDLMKIEHF 3
LA +RKNKK IALKCIFIDQ ELP RTYNCLK+SNIHTLLDLL+ SQEDLM+IEHF
Sbjct: 257 LANIRKNKKGIALKCIFIDQSELPPRTYNCLKRSNIHTLLDLLSNSQEDLMRIEHF 312
>ref|YP_008993466.1| RNA polymerase alpha subunit (chloroplast) [Magnolia kobus]
Length = 337
Score = 306 bits (784), Expect = 2e-81
Identities = 150/176 (85%), Positives = 159/176 (90%)
Frame = -2
Query: 530 ASLTEPIDFCIGLQIERNRGYRTKTPNNAQNGSYPIDAVFMPVRNANYSIHSYGNGNEKQ 351
ASLTEPID CI LQIER+RGYR KTPNN Q+GSYPIDAV MPVRNAN+SIHSYGNGNEKQ
Sbjct: 137 ASLTEPIDLCIELQIERDRGYRMKTPNNYQDGSYPIDAVSMPVRNANHSIHSYGNGNEKQ 196
Query: 350 EILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHAEEQDINFEDNQKKATLTPFTFHDG 171
EILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHAEEQDIN EDNQ + T+ F FHD
Sbjct: 197 EILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHAEEQDINLEDNQNRFTVPLFPFHDR 256
Query: 170 LAKLRKNKKEIALKCIFIDQLELPSRTYNCLKKSNIHTLLDLLNKSQEDLMKIEHF 3
LA +RKNKK IALKCIFIDQ ELP RTYNCLK+SNIHTLLDLL+ SQEDLM+IEHF
Sbjct: 257 LANIRKNKKGIALKCIFIDQSELPPRTYNCLKRSNIHTLLDLLSNSQEDLMRIEHF 312
>ref|YP_008993380.1| RNA polymerase alpha subunit (chloroplast) [Magnolia pyramidata]
Length = 337
Score = 306 bits (783), Expect = 3e-81
Identities = 150/176 (85%), Positives = 159/176 (90%)
Frame = -2
Query: 530 ASLTEPIDFCIGLQIERNRGYRTKTPNNAQNGSYPIDAVFMPVRNANYSIHSYGNGNEKQ 351
ASLTEPID CI LQIER+RGYR KTPNN Q+GSYPIDAV MPVRNAN+SIHSYGNGNEKQ
Sbjct: 137 ASLTEPIDLCIELQIERDRGYRMKTPNNYQDGSYPIDAVSMPVRNANHSIHSYGNGNEKQ 196
Query: 350 EILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHAEEQDINFEDNQKKATLTPFTFHDG 171
EILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHAEEQDIN EDN + T+ FTFHD
Sbjct: 197 EILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHAEEQDINLEDNPNRFTVPFFTFHDR 256
Query: 170 LAKLRKNKKEIALKCIFIDQLELPSRTYNCLKKSNIHTLLDLLNKSQEDLMKIEHF 3
LA +RKNKK IALKCIFIDQ ELP RTYNCLK+SNIHTLLDLL+ SQEDLM+IEHF
Sbjct: 257 LANIRKNKKGIALKCIFIDQSELPPRTYNCLKRSNIHTLLDLLSNSQEDLMRIEHF 312
>ref|YP_007474568.1| RNA polymerase alpha subunit (chloroplast) [Magnolia grandiflora]
gi|372862875|gb|AEX98951.1| RNA polymerase alpha subunit
(chloroplast) [Magnolia grandiflora]
gi|372863045|gb|AEX99119.1| RNA polymerase alpha subunit
(chloroplast) [Magnolia grandiflora]
Length = 337
Score = 306 bits (783), Expect = 3e-81
Identities = 150/176 (85%), Positives = 159/176 (90%)
Frame = -2
Query: 530 ASLTEPIDFCIGLQIERNRGYRTKTPNNAQNGSYPIDAVFMPVRNANYSIHSYGNGNEKQ 351
ASLTEPID CI LQIER+RGYR KTPNN Q+GSYPIDAV MPVRNAN+SIHSYGNGNEKQ
Sbjct: 137 ASLTEPIDLCIELQIERDRGYRMKTPNNYQDGSYPIDAVSMPVRNANHSIHSYGNGNEKQ 196
Query: 350 EILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHAEEQDINFEDNQKKATLTPFTFHDG 171
EILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHAEEQDIN EDN + T+ FTFHD
Sbjct: 197 EILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHAEEQDINLEDNPNRFTVPFFTFHDR 256
Query: 170 LAKLRKNKKEIALKCIFIDQLELPSRTYNCLKKSNIHTLLDLLNKSQEDLMKIEHF 3
LA +RKNKK IALKCIFIDQ ELP RTYNCLK+SNIHTLLDLL+ SQEDLM+IEHF
Sbjct: 257 LANIRKNKKGIALKCIFIDQSELPPRTYNCLKRSNIHTLLDLLSNSQEDLMRIEHF 312
>ref|YP_007474402.1| RNA polymerase alpha subunit (chloroplast) [Magnolia officinalis]
gi|452848803|ref|YP_007474484.1| RNA polymerase alpha
subunit (chloroplast) [Magnolia officinalis subsp.
biloba] gi|619275767|ref|YP_009026913.1| RNA polymerase
alpha subunit [Magnolia tripetala]
gi|372862453|gb|AEX98534.1| RNA polymerase alpha subunit
(chloroplast) [Magnolia officinalis]
gi|372862536|gb|AEX98616.1| RNA polymerase alpha subunit
(chloroplast) [Magnolia officinalis subsp. biloba]
gi|372862621|gb|AEX98700.1| RNA polymerase alpha subunit
(chloroplast) [Magnolia officinalis subsp. biloba]
gi|372862706|gb|AEX98784.1| RNA polymerase alpha subunit
(chloroplast) [Magnolia officinalis subsp. biloba]
gi|608608435|gb|AHW51989.1| RNA polymerase alpha subunit
[Magnolia tripetala]
Length = 337
Score = 306 bits (783), Expect = 3e-81
Identities = 150/176 (85%), Positives = 159/176 (90%)
Frame = -2
Query: 530 ASLTEPIDFCIGLQIERNRGYRTKTPNNAQNGSYPIDAVFMPVRNANYSIHSYGNGNEKQ 351
ASLTEPID CI LQIER+RGYR KTPNN Q+GSYPIDAV MPVRNAN+SIHSYGNGNEKQ
Sbjct: 137 ASLTEPIDLCIELQIERDRGYRMKTPNNYQDGSYPIDAVSMPVRNANHSIHSYGNGNEKQ 196
Query: 350 EILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHAEEQDINFEDNQKKATLTPFTFHDG 171
EILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHAEEQDIN EDN + T+ FTFHD
Sbjct: 197 EILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHAEEQDINLEDNPNRFTVPFFTFHDR 256
Query: 170 LAKLRKNKKEIALKCIFIDQLELPSRTYNCLKKSNIHTLLDLLNKSQEDLMKIEHF 3
LA +RKNKK IALKCIFIDQ ELP RTYNCLK+SNIHTLLDLL+ SQEDLM+IEHF
Sbjct: 257 LANIRKNKKGIALKCIFIDQSELPPRTYNCLKRSNIHTLLDLLSNSQEDLMRIEHF 312
>ref|YP_319795.1| RNA polymerase alpha subunit [Acorus calamus]
gi|161622341|ref|YP_001586213.1| RNA polymerase alpha
subunit [Acorus americanus]
gi|90101572|sp|Q3V502.1|RPOA_ACOCL RecName:
Full=DNA-directed RNA polymerase subunit alpha;
Short=PEP; AltName: Full=Plastid-encoded RNA polymerase
subunit alpha; Short=RNA polymerase subunit alpha
gi|69215818|gb|AAZ03865.1| RNA polymerase alpha chain
[Acorus americanus] gi|74381741|emb|CAI53826.1| RNA
polymerase alpha subunit [Acorus calamus]
gi|160369884|gb|ABX38775.1| RNA polymerase alpha subunit
[Acorus americanus]
Length = 337
Score = 306 bits (783), Expect = 3e-81
Identities = 148/176 (84%), Positives = 162/176 (92%)
Frame = -2
Query: 530 ASLTEPIDFCIGLQIERNRGYRTKTPNNAQNGSYPIDAVFMPVRNANYSIHSYGNGNEKQ 351
ASLTEPID CIGLQI+R+RGYR KT N+Q+GSYPIDAV MPVRNAN+SIHSYGNGN+KQ
Sbjct: 137 ASLTEPIDLCIGLQIQRDRGYRMKTTKNSQDGSYPIDAVSMPVRNANHSIHSYGNGNQKQ 196
Query: 350 EILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHAEEQDINFEDNQKKATLTPFTFHDG 171
EILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHAEE+DINFE+NQ + T+ PFTF D
Sbjct: 197 EILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHAEEEDINFEENQNRFTVPPFTFPDR 256
Query: 170 LAKLRKNKKEIALKCIFIDQLELPSRTYNCLKKSNIHTLLDLLNKSQEDLMKIEHF 3
LA L+KNKKEIALKCIFIDQ ELP RTYNCLK+SNIHTLLDLL+ SQEDLMKIE+F
Sbjct: 257 LANLKKNKKEIALKCIFIDQSELPPRTYNCLKRSNIHTLLDLLSNSQEDLMKIEYF 312
>sp|Q5QA74.1|RPOA_ACOGR RecName: Full=DNA-directed RNA polymerase subunit alpha; Short=PEP;
AltName: Full=Plastid-encoded RNA polymerase subunit
alpha; Short=RNA polymerase subunit alpha
gi|56122468|gb|AAV74359.1| RpoA [Acorus gramineus]
Length = 337
Score = 306 bits (783), Expect = 3e-81
Identities = 148/176 (84%), Positives = 162/176 (92%)
Frame = -2
Query: 530 ASLTEPIDFCIGLQIERNRGYRTKTPNNAQNGSYPIDAVFMPVRNANYSIHSYGNGNEKQ 351
ASLTEPID CIGLQI+R+RGYR KT N+Q+GSYPIDAV MPVRNAN+SIHSYGNGN+KQ
Sbjct: 137 ASLTEPIDLCIGLQIQRDRGYRMKTTKNSQDGSYPIDAVSMPVRNANHSIHSYGNGNQKQ 196
Query: 350 EILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHAEEQDINFEDNQKKATLTPFTFHDG 171
EILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHAEE+DINFE+NQ + T+ PFTF D
Sbjct: 197 EILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHAEEEDINFEENQNRFTVPPFTFPDR 256
Query: 170 LAKLRKNKKEIALKCIFIDQLELPSRTYNCLKKSNIHTLLDLLNKSQEDLMKIEHF 3
LA L+KNKKEIALKCIFIDQ ELP RTYNCLK+SNIHTLLDLL+ SQEDLMKIE+F
Sbjct: 257 LANLKKNKKEIALKCIFIDQSELPPRTYNCLKRSNIHTLLDLLSNSQEDLMKIEYF 312
>gb|ADM92734.1| RNA polymerase alpha subunit protein [Davidia involucrata]
Length = 328
Score = 305 bits (782), Expect = 3e-81
Identities = 149/176 (84%), Positives = 160/176 (90%)
Frame = -2
Query: 530 ASLTEPIDFCIGLQIERNRGYRTKTPNNAQNGSYPIDAVFMPVRNANYSIHSYGNGNEKQ 351
ASLTEPID CIGLQIERNRGYR K PNN Q+GSYPIDAVFMPVRNAN+SIHSYGNGNEKQ
Sbjct: 137 ASLTEPIDLCIGLQIERNRGYRIKMPNNFQDGSYPIDAVFMPVRNANHSIHSYGNGNEKQ 196
Query: 350 EILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHAEEQDINFEDNQKKATLTPFTFHDG 171
EILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLH EE++++ EDNQ K TL FTFH+
Sbjct: 197 EILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHTEEENLHLEDNQHKVTLPLFTFHEK 256
Query: 170 LAKLRKNKKEIALKCIFIDQLELPSRTYNCLKKSNIHTLLDLLNKSQEDLMKIEHF 3
LAKLRKNKK+IALK IFIDQ ELP+R YNCLK+SNI+TLLD LN SQEDLMKIEHF
Sbjct: 257 LAKLRKNKKKIALKYIFIDQSELPTRIYNCLKRSNIYTLLDFLNNSQEDLMKIEHF 312
>ref|YP_008081489.1| RNA polymerase alpha subunit (chloroplast) [Trochodendron
aralioides] gi|290489702|gb|ADD31235.1| RNA polymerase
alpha subunit protein [Trochodendron aralioides]
gi|479279328|gb|AGJ72181.1| RNA polymerase alpha subunit
(chloroplast) [Trochodendron aralioides]
Length = 337
Score = 304 bits (779), Expect = 7e-81
Identities = 148/176 (84%), Positives = 158/176 (89%)
Frame = -2
Query: 530 ASLTEPIDFCIGLQIERNRGYRTKTPNNAQNGSYPIDAVFMPVRNANYSIHSYGNGNEKQ 351
ASLTEPID CIGLQIERNRGYR KTPNN+Q+GSYPIDAVFMPVRNA++SIHSYGNGNEKQ
Sbjct: 137 ASLTEPIDLCIGLQIERNRGYRMKTPNNSQDGSYPIDAVFMPVRNASHSIHSYGNGNEKQ 196
Query: 350 EILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHAEEQDINFEDNQKKATLTPFTFHDG 171
EILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHAEE+ I EDNQ +L F FHD
Sbjct: 197 EILFLEIWTNGSLTPKEALHEASRNLIDLFIPFLHAEEESIKLEDNQNGISLPFFAFHDR 256
Query: 170 LAKLRKNKKEIALKCIFIDQLELPSRTYNCLKKSNIHTLLDLLNKSQEDLMKIEHF 3
LA L+K KKEIA KCIFIDQ ELP RTYNCLK+SNI+TLLDLLN SQEDLMKI+HF
Sbjct: 257 LANLKKKKKEIAFKCIFIDQSELPPRTYNCLKRSNIYTLLDLLNNSQEDLMKIDHF 312