BLASTX nr result
ID: Sinomenium22_contig00047784
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium22_contig00047784
(543 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006432480.1| hypothetical protein CICLE_v10003146mg, part... 75 1e-11
gb|EXB38499.1| Photosystem II CP47 chlorophyll apoprotein [Morus... 74 2e-11
gb|AFU94313.1| PsbB, partial (chloroplast) [Centroplacus glaucinus] 73 4e-11
gb|AFB74263.1| photosystem II protein CP47, partial (chloroplast... 73 5e-11
gb|AEI70834.1| photosystem II-like protein [Helianthus annuus] 72 9e-11
gb|ADM63402.1| photosystem II cp47 protein [Goodenia mimuloides] 71 1e-10
emb|CBB12424.1| Photosystem II CP47 chlorophyll apoprotein [Vani... 71 1e-10
ref|YP_008578114.1| photosystem II 47 kDa protein (chloroplast) ... 71 2e-10
emb|CAA26691.1| unnamed protein product [Spinacia oleracea] 71 2e-10
gb|AFU94340.1| PsbB, partial (chloroplast) [Podostemum ceratophy... 71 2e-10
gb|AEX01350.1| photosystem II CP47 protein [Thalassia testudinum] 71 2e-10
gb|ADM63245.1| photosystem II cp47 protein [Acanthocalyx albus] 71 2e-10
gb|ABW05196.1| photosystem II CP47 protein, partial (chloroplast... 71 2e-10
gb|ABQ14976.1| photosystem II CP47 chlorophyll apoprotein [Coryl... 71 2e-10
gb|ABQ15015.1| photosystem II CP47 chlorophyll apoprotein [Myrio... 71 2e-10
gb|AGW45927.1| PsbB [Lens culinaris] 70 3e-10
gb|AGU00095.1| PsbB (chloroplast) [Glycyrrhiza glabra] 70 3e-10
gb|AGS43999.1| PsbB [Vicia faba] 70 3e-10
gb|AGO63652.1| no product string in file [Trifolium repens] gi|5... 70 3e-10
ref|YP_009026463.1| photosystem II 47 kDa protein (chloroplast) ... 70 3e-10
>ref|XP_006432480.1| hypothetical protein CICLE_v10003146mg, partial [Citrus clementina]
gi|557534602|gb|ESR45720.1| hypothetical protein
CICLE_v10003146mg, partial [Citrus clementina]
Length = 166
Score = 74.7 bits (182), Expect = 1e-11
Identities = 45/102 (44%), Positives = 54/102 (52%)
Frame = +2
Query: 35 REAFHSCGTGDLSILVGLFRLIICLHQHLCGGSHMVDIETVLSCRIVDIFFWTFTVIRTL 214
R A H G L IL GLF L + Q L G M +IETVLS I +FF F V T+
Sbjct: 1 RIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSIAAVFFAAFVVAGTM 60
Query: 215 WFLWAPTLFKLFGSISYQWDQVYLQF*LSCF*YVEKSCY*KS 340
W+ A T +LFG YQWDQ Y Y+E+SCY +S
Sbjct: 61 WYGSATTPIELFGPTRYQWDQGYFS-----KKYIEESCYFES 97
>gb|EXB38499.1| Photosystem II CP47 chlorophyll apoprotein [Morus notabilis]
Length = 456
Score = 74.3 bits (181), Expect = 2e-11
Identities = 40/83 (48%), Positives = 46/83 (55%)
Frame = +2
Query: 41 AFHSCGTGDLSILVGLFRLIICLHQHLCGGSHMVDIETVLSCRIVDIFFWTFTVIRTLWF 220
A H G L IL GLF L +C Q L G M +IETVLS I +FF F V T+W+
Sbjct: 147 ASHHITAGTLGILAGLFHLSVCPPQRLYKGLRMGNIETVLSSSIAAVFFAAFVVAGTMWY 206
Query: 221 LWAPTLFKLFGSISYQWDQVYLQ 289
A T +LFG YQWDQ Y Q
Sbjct: 207 GSATTPIELFGPTRYQWDQGYFQ 229
>gb|AFU94313.1| PsbB, partial (chloroplast) [Centroplacus glaucinus]
Length = 501
Score = 73.2 bits (178), Expect = 4e-11
Identities = 40/83 (48%), Positives = 46/83 (55%)
Frame = +2
Query: 41 AFHSCGTGDLSILVGLFRLIICLHQHLCGGSHMVDIETVLSCRIVDIFFWTFTVIRTLWF 220
A H G L IL GLF L + L Q L G M +IETVLS I +FF F V T+W+
Sbjct: 192 ASHHIAAGTLGILAGLFHLSVRLPQRLYKGLRMGNIETVLSSSIAAVFFAAFVVAGTMWY 251
Query: 221 LWAPTLFKLFGSISYQWDQVYLQ 289
A T +LFG YQWDQ Y Q
Sbjct: 252 GSATTPIELFGPTRYQWDQGYFQ 274
>gb|AFB74263.1| photosystem II protein CP47, partial (chloroplast) [Weingartia
kargliana]
Length = 506
Score = 72.8 bits (177), Expect = 5e-11
Identities = 40/83 (48%), Positives = 46/83 (55%)
Frame = +2
Query: 41 AFHSCGTGDLSILVGLFRLIICLHQHLCGGSHMVDIETVLSCRIVDIFFWTFTVIRTLWF 220
A H G G L IL GLF L + Q L G M +IETVLS I +FF F V T+W+
Sbjct: 199 ASHHIGAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSIAAVFFAAFVVAGTMWY 258
Query: 221 LWAPTLFKLFGSISYQWDQVYLQ 289
A T +LFG YQWDQ Y Q
Sbjct: 259 GSATTPIELFGPTRYQWDQGYFQ 281
>gb|AEI70834.1| photosystem II-like protein [Helianthus annuus]
Length = 470
Score = 72.0 bits (175), Expect = 9e-11
Identities = 39/83 (46%), Positives = 45/83 (54%)
Frame = +2
Query: 41 AFHSCGTGDLSILVGLFRLIICLHQHLCGGSHMVDIETVLSCRIVDIFFWTFTVIRTLWF 220
A H L IL GLF L +C Q L G M + ETVLS IV +FF F V T+W+
Sbjct: 199 ASHHIAAWTLGILAGLFHLSVCPPQRLYKGLRMGNTETVLSSSIVAVFFAAFVVAGTMWY 258
Query: 221 LWAPTLFKLFGSISYQWDQVYLQ 289
A T +LFG YQWDQ Y Q
Sbjct: 259 GSATTPIELFGPTRYQWDQEYFQ 281
>gb|ADM63402.1| photosystem II cp47 protein [Goodenia mimuloides]
Length = 441
Score = 71.2 bits (173), Expect = 1e-10
Identities = 39/83 (46%), Positives = 45/83 (54%)
Frame = +2
Query: 41 AFHSCGTGDLSILVGLFRLIICLHQHLCGGSHMVDIETVLSCRIVDIFFWTFTVIRTLWF 220
A H G L IL GLF L + Q L G M +IETVLS I +FF F V T+W+
Sbjct: 189 ASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSIAAVFFAAFVVSGTMWY 248
Query: 221 LWAPTLFKLFGSISYQWDQVYLQ 289
A T +LFG YQWDQ Y Q
Sbjct: 249 GSATTPIELFGPTRYQWDQAYFQ 271
>emb|CBB12424.1| Photosystem II CP47 chlorophyll apoprotein [Vanilla cf. chamissonis
AB-2009]
Length = 362
Score = 71.2 bits (173), Expect = 1e-10
Identities = 39/83 (46%), Positives = 46/83 (55%)
Frame = +2
Query: 41 AFHSCGTGDLSILVGLFRLIICLHQHLCGGSHMVDIETVLSCRIVDIFFWTFTVIRTLWF 220
A H G L IL GLF L + Q L G M +IETVLS I +FF F V+ T+W+
Sbjct: 140 ASHHIAAGILGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSIAAVFFAAFVVVGTMWY 199
Query: 221 LWAPTLFKLFGSISYQWDQVYLQ 289
A T +LFG YQWDQ Y Q
Sbjct: 200 GSATTPIELFGPTRYQWDQGYFQ 222
>ref|YP_008578114.1| photosystem II 47 kDa protein (chloroplast) [Allosyncarpia ternata]
gi|442569361|gb|AGC59523.1| photosystem II 47 kDa
protein (chloroplast) [Allosyncarpia ternata]
Length = 508
Score = 70.9 bits (172), Expect = 2e-10
Identities = 39/83 (46%), Positives = 45/83 (54%)
Frame = +2
Query: 41 AFHSCGTGDLSILVGLFRLIICLHQHLCGGSHMVDIETVLSCRIVDIFFWTFTVIRTLWF 220
A H G L IL GLF L + Q L G M +IETVLS I +FF F V T+W+
Sbjct: 199 ASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSIAAVFFGAFVVAGTMWY 258
Query: 221 LWAPTLFKLFGSISYQWDQVYLQ 289
A T +LFG YQWDQ Y Q
Sbjct: 259 GSATTPIELFGPTRYQWDQGYFQ 281
>emb|CAA26691.1| unnamed protein product [Spinacia oleracea]
Length = 508
Score = 70.9 bits (172), Expect = 2e-10
Identities = 39/83 (46%), Positives = 45/83 (54%)
Frame = +2
Query: 41 AFHSCGTGDLSILVGLFRLIICLHQHLCGGSHMVDIETVLSCRIVDIFFWTFTVIRTLWF 220
A H G L IL GLF L + Q L G M +IETVLS I +FF F V T+W+
Sbjct: 199 ASHHIAAGTLGILAGLFHLSVRSPQRLYKGLRMGNIETVLSSSIAAVFFAAFVVAGTMWY 258
Query: 221 LWAPTLFKLFGSISYQWDQVYLQ 289
A T +LFG YQWDQ Y Q
Sbjct: 259 GSATTPIELFGPTRYQWDQGYFQ 281
>gb|AFU94340.1| PsbB, partial (chloroplast) [Podostemum ceratophyllum]
Length = 508
Score = 70.9 bits (172), Expect = 2e-10
Identities = 39/83 (46%), Positives = 45/83 (54%)
Frame = +2
Query: 41 AFHSCGTGDLSILVGLFRLIICLHQHLCGGSHMVDIETVLSCRIVDIFFWTFTVIRTLWF 220
A H G L IL GLF L + Q L G M +IETVLS I +FF F V T+W+
Sbjct: 199 AAHHIAAGTLGILAGLFHLSVRPSQRLYKGLRMGNIETVLSSSIAAVFFAAFVVAGTMWY 258
Query: 221 LWAPTLFKLFGSISYQWDQVYLQ 289
A T +LFG YQWDQ Y Q
Sbjct: 259 GSATTPIELFGPTRYQWDQGYFQ 281
>gb|AEX01350.1| photosystem II CP47 protein [Thalassia testudinum]
Length = 498
Score = 70.9 bits (172), Expect = 2e-10
Identities = 39/83 (46%), Positives = 46/83 (55%)
Frame = +2
Query: 41 AFHSCGTGDLSILVGLFRLIICLHQHLCGGSHMVDIETVLSCRIVDIFFWTFTVIRTLWF 220
A H +G L IL GLF L + Q L G M +IETVLS I +FF F V T+W+
Sbjct: 189 ASHHIASGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSIAAVFFAAFVVAGTMWY 248
Query: 221 LWAPTLFKLFGSISYQWDQVYLQ 289
A T +LFG YQWDQ Y Q
Sbjct: 249 GSATTPIELFGPTRYQWDQGYFQ 271
>gb|ADM63245.1| photosystem II cp47 protein [Acanthocalyx albus]
Length = 498
Score = 70.9 bits (172), Expect = 2e-10
Identities = 39/83 (46%), Positives = 45/83 (54%)
Frame = +2
Query: 41 AFHSCGTGDLSILVGLFRLIICLHQHLCGGSHMVDIETVLSCRIVDIFFWTFTVIRTLWF 220
A H G L IL GLF L + Q L G M +IETVLS I +FF F V T+W+
Sbjct: 189 ASHHIAAGSLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSIAAVFFAAFVVAGTMWY 248
Query: 221 LWAPTLFKLFGSISYQWDQVYLQ 289
A T +LFG YQWDQ Y Q
Sbjct: 249 GSATTPIELFGPTRYQWDQGYFQ 271
>gb|ABW05196.1| photosystem II CP47 protein, partial (chloroplast) [Wurmbea spicata
subsp. spicata]
Length = 474
Score = 70.9 bits (172), Expect = 2e-10
Identities = 39/83 (46%), Positives = 45/83 (54%)
Frame = +2
Query: 41 AFHSCGTGDLSILVGLFRLIICLHQHLCGGSHMVDIETVLSCRIVDIFFWTFTVIRTLWF 220
A H G L IL GLF L + Q L G M +IETVLS I +FF F V T+W+
Sbjct: 165 ASHHIAAGTLGILAGLFHLSVRPSQRLYKGLRMGNIETVLSSSIAAVFFAAFVVAGTMWY 224
Query: 221 LWAPTLFKLFGSISYQWDQVYLQ 289
A T +LFG YQWDQ Y Q
Sbjct: 225 GSATTPIELFGPTRYQWDQGYFQ 247
>gb|ABQ14976.1| photosystem II CP47 chlorophyll apoprotein [Corylopsis pauciflora]
Length = 452
Score = 70.9 bits (172), Expect = 2e-10
Identities = 39/83 (46%), Positives = 45/83 (54%)
Frame = +2
Query: 41 AFHSCGTGDLSILVGLFRLIICLHQHLCGGSHMVDIETVLSCRIVDIFFWTFTVIRTLWF 220
A H G L IL GLF L + Q L G M +IETVLS I +FF F V T+W+
Sbjct: 143 ASHHIAAGTLGILAGLFHLSVRPXQRLYKGLRMGNIETVLSSSIAAVFFAAFVVAGTMWY 202
Query: 221 LWAPTLFKLFGSISYQWDQVYLQ 289
A T +LFG YQWDQ Y Q
Sbjct: 203 GSATTPIELFGPTRYQWDQGYFQ 225
>gb|ABQ15015.1| photosystem II CP47 chlorophyll apoprotein [Myriophyllum sp. Broch
s.n.]
Length = 455
Score = 70.9 bits (172), Expect = 2e-10
Identities = 39/83 (46%), Positives = 45/83 (54%)
Frame = +2
Query: 41 AFHSCGTGDLSILVGLFRLIICLHQHLCGGSHMVDIETVLSCRIVDIFFWTFTVIRTLWF 220
A H G L IL GLF L + Q L G M +IETVLS I +FF F V T+W+
Sbjct: 146 ASHHIAAGTLGILAGLFHLSVRPSQRLYTGLRMGNIETVLSSSIAAVFFAAFVVAGTMWY 205
Query: 221 LWAPTLFKLFGSISYQWDQVYLQ 289
A T +LFG YQWDQ Y Q
Sbjct: 206 GSATTPIELFGPTRYQWDQGYFQ 228
>gb|AGW45927.1| PsbB [Lens culinaris]
Length = 508
Score = 70.5 bits (171), Expect = 3e-10
Identities = 39/83 (46%), Positives = 45/83 (54%)
Frame = +2
Query: 41 AFHSCGTGDLSILVGLFRLIICLHQHLCGGSHMVDIETVLSCRIVDIFFWTFTVIRTLWF 220
A H G L IL GLF L + Q L G M +IETVLS I +FF F V T+W+
Sbjct: 199 ASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSIAAVFFAAFVVAGTMWY 258
Query: 221 LWAPTLFKLFGSISYQWDQVYLQ 289
A T +LFG YQWDQ Y Q
Sbjct: 259 GSATTPIELFGPTRYQWDQGYFQ 281
>gb|AGU00095.1| PsbB (chloroplast) [Glycyrrhiza glabra]
Length = 508
Score = 70.5 bits (171), Expect = 3e-10
Identities = 39/83 (46%), Positives = 45/83 (54%)
Frame = +2
Query: 41 AFHSCGTGDLSILVGLFRLIICLHQHLCGGSHMVDIETVLSCRIVDIFFWTFTVIRTLWF 220
A H G L IL GLF L + Q L G M +IETVLS I +FF F V T+W+
Sbjct: 199 ASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSIAAVFFAAFVVAGTMWY 258
Query: 221 LWAPTLFKLFGSISYQWDQVYLQ 289
A T +LFG YQWDQ Y Q
Sbjct: 259 GSATTPIELFGPTRYQWDQGYFQ 281
>gb|AGS43999.1| PsbB [Vicia faba]
Length = 508
Score = 70.5 bits (171), Expect = 3e-10
Identities = 39/83 (46%), Positives = 45/83 (54%)
Frame = +2
Query: 41 AFHSCGTGDLSILVGLFRLIICLHQHLCGGSHMVDIETVLSCRIVDIFFWTFTVIRTLWF 220
A H G L IL GLF L + Q L G M +IETVLS I +FF F V T+W+
Sbjct: 199 ASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSIAAVFFAAFVVAGTMWY 258
Query: 221 LWAPTLFKLFGSISYQWDQVYLQ 289
A T +LFG YQWDQ Y Q
Sbjct: 259 GSATTPIELFGPTRYQWDQGYFQ 281
>gb|AGO63652.1| no product string in file [Trifolium repens]
gi|514994748|gb|AGO63726.1| PsbB [Trifolium
grandiflorum] gi|514994825|gb|AGO63802.1| PsbB
[Trifolium aureum]
Length = 508
Score = 70.5 bits (171), Expect = 3e-10
Identities = 39/83 (46%), Positives = 45/83 (54%)
Frame = +2
Query: 41 AFHSCGTGDLSILVGLFRLIICLHQHLCGGSHMVDIETVLSCRIVDIFFWTFTVIRTLWF 220
A H G L IL GLF L + Q L G M +IETVLS I +FF F V T+W+
Sbjct: 199 ASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSIAAVFFAAFVVAGTMWY 258
Query: 221 LWAPTLFKLFGSISYQWDQVYLQ 289
A T +LFG YQWDQ Y Q
Sbjct: 259 GSATTPIELFGPTRYQWDQGYFQ 281
>ref|YP_009026463.1| photosystem II 47 kDa protein (chloroplast) [Dendrobium officinale]
gi|507474345|gb|AGM48221.1| photosystem II 47 kDa
protein (chloroplast) [Dendrobium officinale]
Length = 508
Score = 70.5 bits (171), Expect = 3e-10
Identities = 39/83 (46%), Positives = 45/83 (54%)
Frame = +2
Query: 41 AFHSCGTGDLSILVGLFRLIICLHQHLCGGSHMVDIETVLSCRIVDIFFWTFTVIRTLWF 220
A H G L IL GLF L + Q L G M +IETVLS I +FF F V T+W+
Sbjct: 199 ASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSIAAVFFAAFVVAGTMWY 258
Query: 221 LWAPTLFKLFGSISYQWDQVYLQ 289
A T +LFG YQWDQ Y Q
Sbjct: 259 GSATTPIELFGPTRYQWDQGYFQ 281