BLASTX nr result
ID: Sinomenium22_contig00047494
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium22_contig00047494
(487 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN59936.1| hypothetical protein VITISV_001878 [Vitis vinifera] 81 2e-32
ref|XP_004149623.1| PREDICTED: uncharacterized protein LOC101211... 79 1e-31
emb|CAB40067.1| putative retrotransposon polyprotein [Arabidopsi... 83 4e-31
emb|CAN83990.1| hypothetical protein VITISV_018454 [Vitis vinifera] 80 8e-31
emb|CAN64225.1| hypothetical protein VITISV_016222 [Vitis vinifera] 84 1e-30
ref|XP_006591522.1| PREDICTED: uncharacterized mitochondrial pro... 85 3e-30
ref|XP_004300707.1| PREDICTED: uncharacterized mitochondrial pro... 79 2e-29
ref|XP_004137882.1| PREDICTED: ABC transporter C family member 1... 75 4e-29
gb|AAF79259.1|AC023279_8 F12K21.14 [Arabidopsis thaliana] 78 6e-29
ref|XP_004310176.1| PREDICTED: uncharacterized protein LOC101315... 78 9e-29
gb|AAD25646.1| putative retroelement pol polyprotein [Arabidopsi... 77 1e-28
gb|AAG10817.1|AC011808_5 Putative retroelement polyprotein [Arab... 80 3e-28
ref|XP_004160348.1| PREDICTED: uncharacterized mitochondrial pro... 76 5e-28
gb|AAD26943.1| putative retroelement pol polyprotein [Arabidopsi... 78 8e-28
gb|AAD17352.1| contains similarity to retrovirus-related polypro... 82 8e-28
ref|XP_004292160.1| PREDICTED: uncharacterized mitochondrial pro... 80 9e-28
ref|XP_004308267.1| PREDICTED: uncharacterized mitochondrial pro... 77 1e-27
dbj|BAB10503.1| retroelement pol polyprotein-like [Arabidopsis t... 74 1e-27
dbj|BAB11447.1| polyprotein-like [Arabidopsis thaliana] 75 2e-27
emb|CAN71595.1| hypothetical protein VITISV_010143 [Vitis vinifera] 80 3e-27
>emb|CAN59936.1| hypothetical protein VITISV_001878 [Vitis vinifera]
Length = 1031
Score = 80.9 bits (198), Expect(3) = 2e-32
Identities = 41/91 (45%), Positives = 63/91 (69%)
Frame = -3
Query: 290 SLSRPYITFAVHKLTQFLTQPRLPHLKAVHHLLRYLKKSFGQGLLFSSNSSLQLRAYTDA 111
+++RP +T++++KL QFL+QPR PHL+AV+ +L+Y+K S G+G+ FS++SSLQ
Sbjct: 801 TITRPNLTYSMNKLIQFLSQPRRPHLQAVYRILQYIKGSPGKGIFFSASSSLQ------- 853
Query: 110 CVPVRLKAFSVADWGSCLDS*RSLLVFASLL 18
LKAFS +DW +C DS +S+ F L
Sbjct: 854 -----LKAFSDSDWAACPDSRKSVTGFCIFL 879
Score = 79.7 bits (195), Expect(3) = 2e-32
Identities = 37/69 (53%), Positives = 49/69 (71%)
Frame = -1
Query: 487 LGLEIAKSKQGIVLSQRHYTLQLLEDAGYLACKPTVVPMDPKFHLTVTEGELLPDIIHYR 308
LGLE+A+S +GI+++QR Y L+LL + GYL CKP PM L+ +GELL D YR
Sbjct: 732 LGLEVARSAKGILINQRKYALELLSETGYLGCKPAKTPMQLNMQLSQDDGELLTDPNMYR 791
Query: 307 RLVGKLLYL 281
RL+GKL+YL
Sbjct: 792 RLIGKLIYL 800
Score = 24.6 bits (52), Expect(3) = 2e-32
Identities = 9/14 (64%), Positives = 12/14 (85%)
Frame = -2
Query: 42 ITRFCIFIEDSLVS 1
+T FCIF+ DSL+S
Sbjct: 872 VTGFCIFLGDSLIS 885
>ref|XP_004149623.1| PREDICTED: uncharacterized protein LOC101211618 [Cucumis sativus]
Length = 2085
Score = 79.3 bits (194), Expect(3) = 1e-31
Identities = 39/71 (54%), Positives = 52/71 (73%), Gaps = 2/71 (2%)
Frame = -1
Query: 487 LGLEIAKSKQGIVLSQRHYTLQLLEDAGYLACKPTVVPMDPKFHLTVTEGELL--PDIIH 314
LGLE+++S++G++LSQR Y LQ+LED G+L KP V PMDP L +EGE L D
Sbjct: 1019 LGLELSRSERGLMLSQRKYCLQILEDTGFLDSKPVVAPMDPNLKLCKSEGEQLTEEDATC 1078
Query: 313 YRRLVGKLLYL 281
YRRL+G+L+YL
Sbjct: 1079 YRRLIGRLIYL 1089
Score = 79.3 bits (194), Expect(3) = 1e-31
Identities = 43/90 (47%), Positives = 54/90 (60%)
Frame = -3
Query: 287 LSRPYITFAVHKLTQFLTQPRLPHLKAVHHLLRYLKKSFGQGLLFSSNSSLQLRAYTDAC 108
+SRP I F+VH+L+QFL +P HL A HHLL+YLK S GQG+L S L+A+ D
Sbjct: 1091 ISRPDICFSVHRLSQFLHKPTKHHLDAAHHLLKYLKGSPGQGVLIKPIDSFHLKAFVD-- 1148
Query: 107 VPVRLKAFSVADWGSCLDS*RSLLVFASLL 18
ADWGSCLD+ RS+ F L
Sbjct: 1149 ----------ADWGSCLDTRRSVTGFCIFL 1168
Score = 23.9 bits (50), Expect(3) = 1e-31
Identities = 8/14 (57%), Positives = 12/14 (85%)
Frame = -2
Query: 42 ITRFCIFIEDSLVS 1
+T FCIF+ DS++S
Sbjct: 1161 VTGFCIFLGDSIIS 1174
>emb|CAB40067.1| putative retrotransposon polyprotein [Arabidopsis thaliana]
gi|7267797|emb|CAB81200.1| putative retrotransposon
polyprotein [Arabidopsis thaliana]
Length = 1203
Score = 83.2 bits (204), Expect(2) = 4e-31
Identities = 40/69 (57%), Positives = 47/69 (68%)
Frame = -1
Query: 487 LGLEIAKSKQGIVLSQRHYTLQLLEDAGYLACKPTVVPMDPKFHLTVTEGELLPDIIHYR 308
LGLEIA+S +GI + QR Y LLED G CKP+ +PMDP HLT G LLP+ YR
Sbjct: 759 LGLEIARSSEGISVCQRKYAQNLLEDVGLSGCKPSSIPMDPNLHLTKEMGTLLPNATSYR 818
Query: 307 RLVGKLLYL 281
LVG+LLYL
Sbjct: 819 ELVGRLLYL 827
Score = 77.4 bits (189), Expect(2) = 4e-31
Identities = 42/92 (45%), Positives = 58/92 (63%)
Frame = -3
Query: 287 LSRPYITFAVHKLTQFLTQPRLPHLKAVHHLLRYLKKSFGQGLLFSSNSSLQLRAYTDAC 108
++RP ITFAVH L+QFL+ P H++A H +LRYLK + GQGL++S++S L L ++D
Sbjct: 829 ITRPDITFAVHTLSQFLSAPTDIHMQAAHKVLRYLKGNPGQGLMYSASSELCLNGFSD-- 886
Query: 107 VPVRLKAFSVADWGSCLDS*RSLLVFASLLKT 12
ADWG+C DS RS+ F L T
Sbjct: 887 ----------ADWGTCKDSRRSVTGFCIYLGT 908
>emb|CAN83990.1| hypothetical protein VITISV_018454 [Vitis vinifera]
Length = 1243
Score = 80.5 bits (197), Expect(3) = 8e-31
Identities = 41/69 (59%), Positives = 47/69 (68%)
Frame = -1
Query: 487 LGLEIAKSKQGIVLSQRHYTLQLLEDAGYLACKPTVVPMDPKFHLTVTEGELLPDIIHYR 308
LGLEIAKS GI +SQR Y L LL D GYL CK PM+ L++ EG LPD+ YR
Sbjct: 983 LGLEIAKSSTGICVSQRKYVLDLLSDFGYLGCKAASTPMEANVKLSMDEGVDLPDVSLYR 1042
Query: 307 RLVGKLLYL 281
RL+GKLLYL
Sbjct: 1043 RLLGKLLYL 1051
Score = 76.6 bits (187), Expect(3) = 8e-31
Identities = 41/91 (45%), Positives = 55/91 (60%)
Frame = -3
Query: 290 SLSRPYITFAVHKLTQFLTQPRLPHLKAVHHLLRYLKKSFGQGLLFSSNSSLQLRAYTDA 111
+L+RP I++ V +L+QF+++P+LPHL A +LRYLK + G GL F SNS L L AYTD
Sbjct: 1052 TLTRPDISYVVGRLSQFISRPKLPHLHAAQRILRYLKGNPGMGLFFPSNSELXLMAYTD- 1110
Query: 110 CVPVRLKAFSVADWGSCLDS*RSLLVFASLL 18
+DW C DS RS+ F L
Sbjct: 1111 -----------SDWARCPDSRRSVTGFCVFL 1130
Score = 22.7 bits (47), Expect(3) = 8e-31
Identities = 8/14 (57%), Positives = 12/14 (85%)
Frame = -2
Query: 42 ITRFCIFIEDSLVS 1
+T FC+F+ +SLVS
Sbjct: 1123 VTGFCVFLGNSLVS 1136
>emb|CAN64225.1| hypothetical protein VITISV_016222 [Vitis vinifera]
Length = 987
Score = 83.6 bits (205), Expect(2) = 1e-30
Identities = 38/69 (55%), Positives = 50/69 (72%)
Frame = -1
Query: 487 LGLEIAKSKQGIVLSQRHYTLQLLEDAGYLACKPTVVPMDPKFHLTVTEGELLPDIIHYR 308
LGLE+A+S +GI+++QR Y L+LL + GYL CKP PM P L+ +GELL D YR
Sbjct: 726 LGLEVARSAKGILINQRKYALELLSETGYLGCKPAKTPMQPNMQLSQDDGELLTDPNMYR 785
Query: 307 RLVGKLLYL 281
RL+GKL+YL
Sbjct: 786 RLIGKLIYL 794
Score = 75.1 bits (183), Expect(2) = 1e-30
Identities = 38/83 (45%), Positives = 58/83 (69%)
Frame = -3
Query: 290 SLSRPYITFAVHKLTQFLTQPRLPHLKAVHHLLRYLKKSFGQGLLFSSNSSLQLRAYTDA 111
+ +RP +T++V+KL+QFL Q R PHL+A++ +L+Y+K S G+G+ FS++SSLQ
Sbjct: 795 TFTRPNLTYSVNKLSQFLCQLRRPHLQAIYRILQYIKGSPGKGIFFSASSSLQ------- 847
Query: 110 CVPVRLKAFSVADWGSCLDS*RS 42
LKAFS +DW +C DS +S
Sbjct: 848 -----LKAFSDSDWAACPDSRKS 865
>ref|XP_006591522.1| PREDICTED: uncharacterized mitochondrial protein AtMg00810-like
[Glycine max]
Length = 237
Score = 84.7 bits (208), Expect(2) = 3e-30
Identities = 40/69 (57%), Positives = 50/69 (72%)
Frame = -1
Query: 487 LGLEIAKSKQGIVLSQRHYTLQLLEDAGYLACKPTVVPMDPKFHLTVTEGELLPDIIHYR 308
LGLEIA S +GIVL+Q+ Y LLED G+L CKP+ +PMDP L + GELL D YR
Sbjct: 108 LGLEIANSSKGIVLTQQKYAFSLLEDTGFLGCKPSSLPMDPNLKLNMLNGELLTDPSMYR 167
Query: 307 RLVGKLLYL 281
RL+G+L+YL
Sbjct: 168 RLLGRLMYL 176
Score = 73.2 bits (178), Expect(2) = 3e-30
Identities = 33/60 (55%), Positives = 43/60 (71%)
Frame = -3
Query: 290 SLSRPYITFAVHKLTQFLTQPRLPHLKAVHHLLRYLKKSFGQGLLFSSNSSLQLRAYTDA 111
++SRP ITF V+KL+Q++ PR PHL VHHLL+Y+K + GQGL F N+ L AY DA
Sbjct: 177 TISRPDITFVVNKLSQYIQNPRTPHLDVVHHLLQYIKGTLGQGLHFQPNNYFNLSAYADA 236
>ref|XP_004300707.1| PREDICTED: uncharacterized mitochondrial protein AtMg00810-like
[Fragaria vesca subsp. vesca]
Length = 316
Score = 79.0 bits (193), Expect(2) = 2e-29
Identities = 37/69 (53%), Positives = 50/69 (72%)
Frame = -1
Query: 487 LGLEIAKSKQGIVLSQRHYTLQLLEDAGYLACKPTVVPMDPKFHLTVTEGELLPDIIHYR 308
LG+E+A+SK+GIVL QR Y L++LED G+L KP+ P++ LT +G LL D YR
Sbjct: 8 LGIEVARSKKGIVLCQRKYALEILEDTGFLGVKPSSFPVEQNLSLTQADGVLLQDPSQYR 67
Query: 307 RLVGKLLYL 281
RLVG+L+YL
Sbjct: 68 RLVGRLIYL 76
Score = 75.9 bits (185), Expect(2) = 2e-29
Identities = 38/91 (41%), Positives = 57/91 (62%)
Frame = -3
Query: 290 SLSRPYITFAVHKLTQFLTQPRLPHLKAVHHLLRYLKKSFGQGLLFSSNSSLQLRAYTDA 111
+++RP + +AVH L+QF+ +PR PHLKA H +LRY+K++ GQG+L SS L+LRA+ D
Sbjct: 77 TITRPDLVYAVHILSQFMDKPRQPHLKAAHKVLRYIKQTPGQGVLLSSTGPLELRAFCD- 135
Query: 110 CVPVRLKAFSVADWGSCLDS*RSLLVFASLL 18
ADW C D+ R + + L+
Sbjct: 136 -----------ADWARCRDTRRFVSGYCVLI 155
>ref|XP_004137882.1| PREDICTED: ABC transporter C family member 13-like [Cucumis sativus]
Length = 2377
Score = 75.5 bits (184), Expect(3) = 4e-29
Identities = 42/90 (46%), Positives = 52/90 (57%)
Frame = -3
Query: 287 LSRPYITFAVHKLTQFLTQPRLPHLKAVHHLLRYLKKSFGQGLLFSSNSSLQLRAYTDAC 108
+S P I F VH+L+QFL +P HL A HHLL+YLK S GQG+L S L+A+ D
Sbjct: 1843 ISSPDICFFVHRLSQFLHKPTKHHLDAAHHLLKYLKGSPGQGVLIKPIDSFHLKAFLD-- 1900
Query: 107 VPVRLKAFSVADWGSCLDS*RSLLVFASLL 18
ADWGSCLD+ RS+ F L
Sbjct: 1901 ----------ADWGSCLDTRRSVTGFCIFL 1920
Score = 74.7 bits (182), Expect(3) = 4e-29
Identities = 37/71 (52%), Positives = 51/71 (71%), Gaps = 2/71 (2%)
Frame = -1
Query: 487 LGLEIAKSKQGIVLSQRHYTLQLLEDAGYLACKPTVVPMDPKFHLTVTEGELL--PDIIH 314
LGLE+++S++G++LSQR Y LQ+LED G+L KP V MDP L +EGE + D
Sbjct: 1771 LGLELSRSERGLMLSQRKYCLQILEDTGFLDSKPVVALMDPNLKLCKSEGEQITEEDATC 1830
Query: 313 YRRLVGKLLYL 281
YRRL+G+L+YL
Sbjct: 1831 YRRLIGRLIYL 1841
Score = 23.9 bits (50), Expect(3) = 4e-29
Identities = 8/14 (57%), Positives = 12/14 (85%)
Frame = -2
Query: 42 ITRFCIFIEDSLVS 1
+T FCIF+ DS++S
Sbjct: 1913 VTGFCIFLGDSIIS 1926
>gb|AAF79259.1|AC023279_8 F12K21.14 [Arabidopsis thaliana]
Length = 427
Score = 77.8 bits (190), Expect(2) = 6e-29
Identities = 41/87 (47%), Positives = 56/87 (64%)
Frame = -3
Query: 290 SLSRPYITFAVHKLTQFLTQPRLPHLKAVHHLLRYLKKSFGQGLLFSSNSSLQLRAYTDA 111
+++RP ITFAV+KL QF + PR HL AV+ +L+Y+K + GQGL +S++S L L+ YTD
Sbjct: 217 TITRPDITFAVNKLCQFSSAPRTSHLTAVYKVLQYIKGTVGQGLFYSADSDLTLKGYTD- 275
Query: 110 CVPVRLKAFSVADWGSCLDS*RSLLVF 30
ADWG+C DS RS F
Sbjct: 276 -----------ADWGTCPDSRRSTTGF 291
Score = 75.5 bits (184), Expect(2) = 6e-29
Identities = 36/69 (52%), Positives = 47/69 (68%)
Frame = -1
Query: 487 LGLEIAKSKQGIVLSQRHYTLQLLEDAGYLACKPTVVPMDPKFHLTVTEGELLPDIIHYR 308
LGLE+A++ +GI L QR Y L+LL AG L CKP+ +PM P L+ +G LL D YR
Sbjct: 148 LGLEVARTTEGISLCQRKYALELLTSAGMLDCKPSTIPMTPNLRLSKADGVLLEDAEMYR 207
Query: 307 RLVGKLLYL 281
LVG+L+YL
Sbjct: 208 SLVGRLMYL 216
>ref|XP_004310176.1| PREDICTED: uncharacterized protein LOC101315202 [Fragaria vesca
subsp. vesca]
Length = 1149
Score = 78.2 bits (191), Expect(3) = 9e-29
Identities = 38/69 (55%), Positives = 48/69 (69%)
Frame = -1
Query: 487 LGLEIAKSKQGIVLSQRHYTLQLLEDAGYLACKPTVVPMDPKFHLTVTEGELLPDIIHYR 308
LG+E+A+S+ GI + QR YTL +LE+AG L KP VPM+P L+ T E L D YR
Sbjct: 598 LGIEVARSQAGITVCQRKYTLDILEEAGLLGTKPATVPMEPDLVLSETGSEALKDPTRYR 657
Query: 307 RLVGKLLYL 281
RLVGKL+YL
Sbjct: 658 RLVGKLIYL 666
Score = 73.2 bits (178), Expect(3) = 9e-29
Identities = 41/91 (45%), Positives = 54/91 (59%)
Frame = -3
Query: 290 SLSRPYITFAVHKLTQFLTQPRLPHLKAVHHLLRYLKKSFGQGLLFSSNSSLQLRAYTDA 111
++SRP IT++V+ L+QF+ P+L HLKA H LL+YLK + GQGLLF SNS L L Y D
Sbjct: 667 TISRPEITYSVNTLSQFMQIPKLHHLKAAHRLLQYLKAAPGQGLLFPSNSPLHLIGYCD- 725
Query: 110 CVPVRLKAFSVADWGSCLDS*RSLLVFASLL 18
ADW C + RS+ + L
Sbjct: 726 -----------ADWARCPITRRSITGYCIFL 745
Score = 21.6 bits (44), Expect(3) = 9e-29
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = -2
Query: 42 ITRFCIFIEDSLVS 1
IT +CIF+ SLVS
Sbjct: 738 ITGYCIFLGKSLVS 751
>gb|AAD25646.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1461
Score = 76.6 bits (187), Expect(2) = 1e-28
Identities = 38/69 (55%), Positives = 48/69 (69%)
Frame = -1
Query: 487 LGLEIAKSKQGIVLSQRHYTLQLLEDAGYLACKPTVVPMDPKFHLTVTEGELLPDIIHYR 308
LGLE+A++ +GI LSQR Y L+LL A L CKP+ +PM P L+ +G LL D YR
Sbjct: 1181 LGLEVARTSEGISLSQRKYALELLTSADMLDCKPSSIPMTPNIRLSKNDGLLLEDKEMYR 1240
Query: 307 RLVGKLLYL 281
RLVGKL+YL
Sbjct: 1241 RLVGKLMYL 1249
Score = 75.9 bits (185), Expect(2) = 1e-28
Identities = 40/87 (45%), Positives = 54/87 (62%)
Frame = -3
Query: 290 SLSRPYITFAVHKLTQFLTQPRLPHLKAVHHLLRYLKKSFGQGLLFSSNSSLQLRAYTDA 111
+++RP ITFAV+KL QF + PR HL AV+ +L+Y+K + GQGL +S+ L L+ YTD
Sbjct: 1250 TITRPDITFAVNKLCQFSSAPRTAHLAAVYKVLQYIKGTVGQGLFYSAEDDLTLKGYTD- 1308
Query: 110 CVPVRLKAFSVADWGSCLDS*RSLLVF 30
ADWG+C DS RS F
Sbjct: 1309 -----------ADWGTCPDSRRSTTGF 1324
>gb|AAG10817.1|AC011808_5 Putative retroelement polyprotein [Arabidopsis thaliana]
Length = 1413
Score = 80.1 bits (196), Expect(2) = 3e-28
Identities = 38/69 (55%), Positives = 50/69 (72%)
Frame = -1
Query: 487 LGLEIAKSKQGIVLSQRHYTLQLLEDAGYLACKPTVVPMDPKFHLTVTEGELLPDIIHYR 308
LGLEIA++ GI + QR YTL+LL + G L CK + VPM+P L+ +GEL+ D HYR
Sbjct: 1149 LGLEIARNTDGISICQRKYTLELLAETGLLGCKSSSVPMEPNQKLSQEDGELIDDAEHYR 1208
Query: 307 RLVGKLLYL 281
+LVGKL+YL
Sbjct: 1209 KLVGKLMYL 1217
Score = 70.9 bits (172), Expect(2) = 3e-28
Identities = 35/80 (43%), Positives = 51/80 (63%)
Frame = -3
Query: 290 SLSRPYITFAVHKLTQFLTQPRLPHLKAVHHLLRYLKKSFGQGLLFSSNSSLQLRAYTDA 111
+ +RP IT+AVH+L QF + PR+PHLKAV+ ++ YLK + GQGL +S+N L+L + D
Sbjct: 1218 TFTRPDITYAVHRLCQFTSAPRVPHLKAVYKIIYYLKGTVGQGLFYSANVDLKLSGFAD- 1276
Query: 110 CVPVRLKAFSVADWGSCLDS 51
+D+ SC DS
Sbjct: 1277 -----------SDFSSCSDS 1285
>ref|XP_004160348.1| PREDICTED: uncharacterized mitochondrial protein AtMg00810-like
[Cucumis sativus]
Length = 259
Score = 75.9 bits (185), Expect(2) = 5e-28
Identities = 40/69 (57%), Positives = 47/69 (68%)
Frame = -1
Query: 487 LGLEIAKSKQGIVLSQRHYTLQLLEDAGYLACKPTVVPMDPKFHLTVTEGELLPDIIHYR 308
L LE+A S GI+LSQRHY L LLE+ L KPT VPMDP L ++ +LL D I YR
Sbjct: 27 LDLELAHSSIGILLSQRHYALCLLEEINLLGSKPTSVPMDPTTKLKASDRDLLQDPIAYR 86
Query: 307 RLVGKLLYL 281
L+GKLLYL
Sbjct: 87 SLIGKLLYL 95
Score = 74.3 bits (181), Expect(2) = 5e-28
Identities = 38/87 (43%), Positives = 52/87 (59%)
Frame = -3
Query: 290 SLSRPYITFAVHKLTQFLTQPRLPHLKAVHHLLRYLKKSFGQGLLFSSNSSLQLRAYTDA 111
++SRP ITF VHKL+QF+ +P H A +HLLRY+K S GQG+ S + L L+A+ D
Sbjct: 96 TISRPDITFVVHKLSQFMEKPNKTHTNAANHLLRYIKGSPGQGIFLSKTNVLSLKAFAD- 154
Query: 110 CVPVRLKAFSVADWGSCLDS*RSLLVF 30
DWGSC D+ S++ F
Sbjct: 155 -----------VDWGSCPDTHCSVIKF 170
>gb|AAD26943.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1454
Score = 77.8 bits (190), Expect(2) = 8e-28
Identities = 36/69 (52%), Positives = 48/69 (69%)
Frame = -1
Query: 487 LGLEIAKSKQGIVLSQRHYTLQLLEDAGYLACKPTVVPMDPKFHLTVTEGELLPDIIHYR 308
LGLE+A++ GI + QR Y L+LL+ G LACKP VPM P + +G+L+ DI YR
Sbjct: 1174 LGLEVARTTAGISICQRKYALELLQSTGMLACKPVSVPMIPNLKMRKDDGDLIEDIEQYR 1233
Query: 307 RLVGKLLYL 281
R+VGKL+YL
Sbjct: 1234 RIVGKLMYL 1242
Score = 71.6 bits (174), Expect(2) = 8e-28
Identities = 37/87 (42%), Positives = 53/87 (60%)
Frame = -3
Query: 290 SLSRPYITFAVHKLTQFLTQPRLPHLKAVHHLLRYLKKSFGQGLLFSSNSSLQLRAYTDA 111
+++RP ITFAV+KL QF + PR HL A + +L+Y+K + GQGL +S++S L L+ + D
Sbjct: 1243 TITRPDITFAVNKLCQFSSAPRTTHLTAAYRVLQYIKGTVGQGLFYSASSDLTLKGFAD- 1301
Query: 110 CVPVRLKAFSVADWGSCLDS*RSLLVF 30
+DW SC DS RS F
Sbjct: 1302 -----------SDWASCQDSRRSTTSF 1317
>gb|AAD17352.1| contains similarity to retrovirus-related polyproteins [Arabidopsis
thaliana] gi|7267379|emb|CAB77940.1| putative polyprotein
[Arabidopsis thaliana]
Length = 1366
Score = 82.0 bits (201), Expect(2) = 8e-28
Identities = 38/69 (55%), Positives = 51/69 (73%)
Frame = -1
Query: 487 LGLEIAKSKQGIVLSQRHYTLQLLEDAGYLACKPTVVPMDPKFHLTVTEGELLPDIIHYR 308
LGLEIA+SK+GI +SQR Y L+LLE+ G+L CKP PM+ L+ +G LL D HYR
Sbjct: 1123 LGLEIARSKEGISISQRKYALELLEEFGFLGCKPVPTPMELNLKLSQEDGALLLDASHYR 1182
Query: 307 RLVGKLLYL 281
+L+G+L+YL
Sbjct: 1183 KLIGRLVYL 1191
Score = 67.4 bits (163), Expect(2) = 8e-28
Identities = 38/94 (40%), Positives = 56/94 (59%), Gaps = 1/94 (1%)
Frame = -3
Query: 290 SLSRPYITFAVHKLTQFLTQPRLPHLKAVHHLLRYLKKSFGQGLLFSSNSSLQLRAYTDA 111
+++RP I FAV+KL Q+++ PR PHL A +LRYLK GQG+ + ++S+L RA+ D
Sbjct: 1192 TVTRPDICFAVNKLNQYMSAPREPHLMAARRILRYLKNDPGQGVFYPASSTLTFRAFAD- 1250
Query: 110 CVPVRLKAFSVADWGSCLDS*RSL-LVFASLLKT 12
ADW +C +S S+ +VF L T
Sbjct: 1251 -----------ADWSNCPESSISISIVFWLKLST 1273
>ref|XP_004292160.1| PREDICTED: uncharacterized mitochondrial protein AtMg00810-like
[Fragaria vesca subsp. vesca]
Length = 195
Score = 80.5 bits (197), Expect(2) = 9e-28
Identities = 39/69 (56%), Positives = 52/69 (75%)
Frame = -1
Query: 487 LGLEIAKSKQGIVLSQRHYTLQLLEDAGYLACKPTVVPMDPKFHLTVTEGELLPDIIHYR 308
LG+E+A+SKQGIVLSQR Y L++LED+G+L KPT ++ LT EG+L+ D YR
Sbjct: 66 LGIEVARSKQGIVLSQRKYALEILEDSGFLGAKPTTFHVEYNSTLTRGEGKLMSDPSQYR 125
Query: 307 RLVGKLLYL 281
RLVG+L+YL
Sbjct: 126 RLVGRLIYL 134
Score = 68.9 bits (167), Expect(2) = 9e-28
Identities = 33/60 (55%), Positives = 43/60 (71%)
Frame = -3
Query: 290 SLSRPYITFAVHKLTQFLTQPRLPHLKAVHHLLRYLKKSFGQGLLFSSNSSLQLRAYTDA 111
+++RP I + V L QF+ +PR PHL+A H +LRYLK++ GQGLL S LQLRAY DA
Sbjct: 135 TITRPDIVYEVQILNQFMDKPREPHLEAAHKVLRYLKQTPGQGLLLPSRGKLQLRAYCDA 194
>ref|XP_004308267.1| PREDICTED: uncharacterized mitochondrial protein AtMg00810-like
[Fragaria vesca subsp. vesca]
Length = 235
Score = 77.0 bits (188), Expect(2) = 1e-27
Identities = 36/69 (52%), Positives = 49/69 (71%)
Frame = -1
Query: 487 LGLEIAKSKQGIVLSQRHYTLQLLEDAGYLACKPTVVPMDPKFHLTVTEGELLPDIIHYR 308
LG+E+A+S+ GI L QR Y L++LED G+LA KP+ P+D L +EG LL D YR
Sbjct: 52 LGIEVARSRHGIALCQRKYALEMLEDTGFLASKPSRFPVDHNLTLMQSEGSLLADPSQYR 111
Query: 307 RLVGKLLYL 281
RLVG+++YL
Sbjct: 112 RLVGRMIYL 120
Score = 72.0 bits (175), Expect(2) = 1e-27
Identities = 36/91 (39%), Positives = 53/91 (58%)
Frame = -3
Query: 290 SLSRPYITFAVHKLTQFLTQPRLPHLKAVHHLLRYLKKSFGQGLLFSSNSSLQLRAYTDA 111
+++RP + +AVH L+QF+ +PR PHL A H +LRYLK + GQG+L S L+L + D
Sbjct: 121 TITRPDLAYAVHVLSQFMDKPRQPHLDAAHLVLRYLKGTLGQGILLPSTGKLELTGFCD- 179
Query: 110 CVPVRLKAFSVADWGSCLDS*RSLLVFASLL 18
ADW C D+ RS+ + +L
Sbjct: 180 -----------ADWARCKDTRRSVTGYCVML 199
>dbj|BAB10503.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
Length = 1475
Score = 74.3 bits (181), Expect(2) = 1e-27
Identities = 37/72 (51%), Positives = 52/72 (72%), Gaps = 3/72 (4%)
Frame = -1
Query: 487 LGLEIAKSKQGIVLSQRHYTLQLLEDAGYLACKPTVVPMDPKFHLTVTEGELL---PDII 317
LGLEIA++K+GI + QR YT++LLED G L C+P+ +PM+P L+ E + P++
Sbjct: 1194 LGLEIARTKEGISVCQRKYTMELLEDTGLLGCRPSTIPMEPSLKLSQHNDEHVIDNPEV- 1252
Query: 316 HYRRLVGKLLYL 281
YRRLVGKL+YL
Sbjct: 1253 -YRRLVGKLMYL 1263
Score = 74.3 bits (181), Expect(2) = 1e-27
Identities = 38/83 (45%), Positives = 53/83 (63%)
Frame = -3
Query: 290 SLSRPYITFAVHKLTQFLTQPRLPHLKAVHHLLRYLKKSFGQGLLFSSNSSLQLRAYTDA 111
+++RP IT+A+++L QF + P+ HLKA ++ YLK + G GL +SS S L L+AYTD
Sbjct: 1264 TITRPDITYAINRLCQFSSSPKNSHLKAAQKVVHYLKGTIGLGLFYSSKSDLCLKAYTD- 1322
Query: 110 CVPVRLKAFSVADWGSCLDS*RS 42
ADWGSC+DS RS
Sbjct: 1323 -----------ADWGSCVDSRRS 1334
>dbj|BAB11447.1| polyprotein-like [Arabidopsis thaliana]
Length = 509
Score = 74.7 bits (182), Expect(2) = 2e-27
Identities = 39/69 (56%), Positives = 46/69 (66%)
Frame = -1
Query: 487 LGLEIAKSKQGIVLSQRHYTLQLLEDAGYLACKPTVVPMDPKFHLTVTEGELLPDIIHYR 308
LGLEIA++ GI + QR Y L LL ++G L CKP VPMDPK LT G LL D YR
Sbjct: 220 LGLEIARNSDGISICQRKYCLDLLANSGLLGCKPKSVPMDPKVVLTKDLGTLLEDGRPYR 279
Query: 307 RLVGKLLYL 281
L+G+LLYL
Sbjct: 280 ELIGRLLYL 288
Score = 73.6 bits (179), Expect(2) = 2e-27
Identities = 39/83 (46%), Positives = 51/83 (61%)
Frame = -3
Query: 287 LSRPYITFAVHKLTQFLTQPRLPHLKAVHHLLRYLKKSFGQGLLFSSNSSLQLRAYTDAC 108
++RP ITFAVH L+QFL+ P HL A H +L+YLK + GQGL S+ + L L + D
Sbjct: 290 VTRPDITFAVHNLSQFLSCPTNVHLHAAHQVLKYLKNNPGQGLFSSAGTELYLNGFAD-- 347
Query: 107 VPVRLKAFSVADWGSCLDS*RSL 39
ADWG+CLDS RS+
Sbjct: 348 ----------ADWGTCLDSRRSV 360
>emb|CAN71595.1| hypothetical protein VITISV_010143 [Vitis vinifera]
Length = 1523
Score = 79.7 bits (195), Expect(2) = 3e-27
Identities = 39/69 (56%), Positives = 50/69 (72%)
Frame = -1
Query: 487 LGLEIAKSKQGIVLSQRHYTLQLLEDAGYLACKPTVVPMDPKFHLTVTEGELLPDIIHYR 308
LG+E+A+SKQGIVL QR Y L+LLEDAG+L KP+ P++ LT +G L D YR
Sbjct: 1198 LGIEVARSKQGIVLCQRKYALELLEDAGFLGAKPSRFPVEQSLTLTRGDGAELKDASQYR 1257
Query: 307 RLVGKLLYL 281
RLVG+L+YL
Sbjct: 1258 RLVGRLIYL 1266
Score = 67.8 bits (164), Expect(2) = 3e-27
Identities = 34/83 (40%), Positives = 49/83 (59%)
Frame = -3
Query: 290 SLSRPYITFAVHKLTQFLTQPRLPHLKAVHHLLRYLKKSFGQGLLFSSNSSLQLRAYTDA 111
+++RP + +AVH L+QF+ PR PHL A + +LRY+K++ GQG+ S L+L AY D
Sbjct: 1267 TITRPDLVYAVHILSQFMDTPRQPHLDAAYKVLRYVKQTPGQGIFLPSTGQLELTAYCD- 1325
Query: 110 CVPVRLKAFSVADWGSCLDS*RS 42
ADW C D+ RS
Sbjct: 1326 -----------ADWARCKDTRRS 1337