BLASTX nr result

ID: Sinomenium22_contig00047429 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium22_contig00047429
         (270 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAI65950.1| homoserine kinase [Solanum tuberosum]                  57   2e-06
ref|XP_006360852.1| PREDICTED: probable homoserine kinase-like [...    57   3e-06
ref|XP_004236876.1| PREDICTED: homoserine kinase-like [Solanum l...    57   3e-06
ref|XP_002517698.1| homoserine kinase, putative [Ricinus communi...    57   3e-06
ref|XP_006364368.1| PREDICTED: probable homoserine kinase-like [...    56   6e-06

>emb|CAI65950.1| homoserine kinase [Solanum tuberosum]
          Length = 189

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 29/57 (50%), Positives = 36/57 (63%)
 Frame = +3

Query: 36  SGASKSMYVPPSPNTKPVDTSIKFFTPTTIANLGLGFNFLSCTVDEIDNLVTFPVDP 206
           S +SK+      P  +PV TS+K F P T+ANLG GF+FL C VD I + VT  VDP
Sbjct: 39  SVSSKTQTHITIPEPEPVFTSVKSFAPATVANLGPGFDFLGCAVDGIGDFVTLRVDP 95


>ref|XP_006360852.1| PREDICTED: probable homoserine kinase-like [Solanum tuberosum]
          Length = 376

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 28/57 (49%), Positives = 36/57 (63%)
 Frame = +3

Query: 36  SGASKSMYVPPSPNTKPVDTSIKFFTPTTIANLGLGFNFLSCTVDEIDNLVTFPVDP 206
           S +SK+      P  +PV TS+K F P T+ANLG GF+FL C VD + + VT  VDP
Sbjct: 40  SVSSKTQTHITIPEPEPVFTSVKSFAPATVANLGPGFDFLGCAVDGVGDFVTLRVDP 96


>ref|XP_004236876.1| PREDICTED: homoserine kinase-like [Solanum lycopersicum]
          Length = 377

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 28/57 (49%), Positives = 36/57 (63%)
 Frame = +3

Query: 36  SGASKSMYVPPSPNTKPVDTSIKFFTPTTIANLGLGFNFLSCTVDEIDNLVTFPVDP 206
           S +SK+      P  +PV TS+K F P T+ANLG GF+FL C VD + + VT  VDP
Sbjct: 40  SVSSKTQTHITIPEPEPVFTSVKSFAPATVANLGPGFDFLGCAVDGVGDFVTLRVDP 96


>ref|XP_002517698.1| homoserine kinase, putative [Ricinus communis]
           gi|223543330|gb|EEF44862.1| homoserine kinase, putative
           [Ricinus communis]
          Length = 367

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 25/46 (54%), Positives = 32/46 (69%)
 Frame = +3

Query: 81  KPVDTSIKFFTPTTIANLGLGFNFLSCTVDEIDNLVTFPVDPAAQP 218
           +PV TS+K F P T+ANLG GF+FL C VD + + VT  VDP+  P
Sbjct: 42  EPVFTSVKSFAPATVANLGPGFDFLGCAVDGLGDFVTVTVDPSVHP 87


>ref|XP_006364368.1| PREDICTED: probable homoserine kinase-like [Solanum tuberosum]
          Length = 373

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 32/87 (36%), Positives = 43/87 (49%), Gaps = 15/87 (17%)
 Frame = +3

Query: 3   STVCTEPIGAK-----SGASKSMYVPPS----------PNTKPVDTSIKFFTPTTIANLG 137
           + +C  P+  K     S +S++    PS              PV TS+K F P T+ANLG
Sbjct: 2   AVLCQSPLNLKLITSSSSSSRNRTANPSFRLNLSAHSRSEPSPVFTSVKSFAPATVANLG 61

Query: 138 LGFNFLSCTVDEIDNLVTFPVDPAAQP 218
            GF+FL C VD I + VT  +DP   P
Sbjct: 62  PGFDFLGCAVDGIGDFVTLRLDPNVHP 88


Top