BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium22_contig00046973
         (356 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_007137030.1| hypothetical protein PHAVU_009G093700g [Phas...    59   9e-07
ref|XP_007011871.1| RNA-dependent RNA polymerase 6 [Theobroma ca...    58   1e-06
ref|XP_004291459.1| PREDICTED: RNA-dependent RNA polymerase 6-li...    57   2e-06
gb|ADG57590.1| RNA-dependent RNA polymerase 6 [Gossypium hirsutu...    57   2e-06
gb|AAF74208.1|AF268093_1 RNA-dependent RNA polymerase [Arabidops...    57   3e-06
ref|NP_190519.1| RNA-dependent RNA polymerase 6 [Arabidopsis tha...    57   3e-06
ref|XP_003526410.1| PREDICTED: RNA-dependent RNA polymerase 6-li...    57   3e-06
ref|XP_003522618.1| PREDICTED: RNA-dependent RNA polymerase 6-li...    55   8e-06
ref|XP_002308662.1| SILENCING DEFECTIVE 1 family protein [Populu...    55   8e-06

>ref|XP_007137030.1| hypothetical protein PHAVU_009G093700g [Phaseolus vulgaris]
           gi|561010117|gb|ESW09024.1| hypothetical protein
           PHAVU_009G093700g [Phaseolus vulgaris]
          Length = 1204

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 23/41 (56%), Positives = 34/41 (82%)
 Frame = -2

Query: 124 EKEKKETIVTQVSLGGFGKHVPADELSNFLEDKVGVIWRCR 2
           E  +K+++VTQ+S+GGFG  V A EL N+LEDK+G+++RCR
Sbjct: 4   EASEKDSVVTQISIGGFGSEVKASELVNYLEDKIGLVYRCR 44


>ref|XP_007011871.1| RNA-dependent RNA polymerase 6 [Theobroma cacao]
           gi|508782234|gb|EOY29490.1| RNA-dependent RNA polymerase
           6 [Theobroma cacao]
          Length = 1197

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 22/42 (52%), Positives = 35/42 (83%)
 Frame = -2

Query: 127 NEKEKKETIVTQVSLGGFGKHVPADELSNFLEDKVGVIWRCR 2
           ++  +K+T+VTQVS+GGFG+HV A +L  + +++VGV+WRCR
Sbjct: 3   SQGSEKDTVVTQVSVGGFGRHVAAKDLMEYFDNEVGVVWRCR 44


>ref|XP_004291459.1| PREDICTED: RNA-dependent RNA polymerase 6-like [Fragaria vesca
           subsp. vesca]
          Length = 1197

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 23/41 (56%), Positives = 34/41 (82%)
 Frame = -2

Query: 124 EKEKKETIVTQVSLGGFGKHVPADELSNFLEDKVGVIWRCR 2
           E+ + +T+VTQVS GGFG HV A EL ++LED++G+++RCR
Sbjct: 4   EERENDTVVTQVSFGGFGSHVTAKELVSYLEDEIGLVFRCR 44


>gb|ADG57590.1| RNA-dependent RNA polymerase 6 [Gossypium hirsutum]
           gi|295885034|gb|ADG57592.1| RNA-dependent RNA polymerase
           6 [Gossypium hirsutum]
          Length = 1196

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 24/41 (58%), Positives = 33/41 (80%)
 Frame = -2

Query: 124 EKEKKETIVTQVSLGGFGKHVPADELSNFLEDKVGVIWRCR 2
           E   KET+VTQVS+GGF +HV A +L  +LE++VG++WRCR
Sbjct: 4   EGSVKETVVTQVSVGGFDRHVKARDLMKYLENEVGLVWRCR 44


>gb|AAF74208.1|AF268093_1 RNA-dependent RNA polymerase [Arabidopsis thaliana]
          Length = 1196

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 22/42 (52%), Positives = 35/42 (83%)
 Frame = -2

Query: 127 NEKEKKETIVTQVSLGGFGKHVPADELSNFLEDKVGVIWRCR 2
           +E   K+++VTQVS+GGFG+   A +L+++LED+VG++WRCR
Sbjct: 3   SEGNMKKSVVTQVSIGGFGESTTAKQLTDYLEDEVGIVWRCR 44


>ref|NP_190519.1| RNA-dependent RNA polymerase 6 [Arabidopsis thaliana]
           gi|75337188|sp|Q9SG02.1|RDR6_ARATH RecName:
           Full=RNA-dependent RNA polymerase 6; Short=AtRDRP6;
           AltName: Full=Protein SILENCING DEFECTIVE 1; AltName:
           Full=Protein SUPPRESSOR OF GENE SILENCING 2; AltName:
           Full=RNA-directed RNA polymerase 6
           gi|12324444|gb|AAG52184.1|AC012329_11 putative
           RNA-directed RNA polymerase; 73997-69985 [Arabidopsis
           thaliana] gi|6899955|emb|CAB71285.1| RNA-directed RNA
           polymerase-like protein [Arabidopsis thaliana]
           gi|8164028|gb|AAF73959.1| SGS2 [Arabidopsis thaliana]
           gi|332645029|gb|AEE78550.1| RNA-dependent RNA polymerase
           6 [Arabidopsis thaliana]
          Length = 1196

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 22/42 (52%), Positives = 35/42 (83%)
 Frame = -2

Query: 127 NEKEKKETIVTQVSLGGFGKHVPADELSNFLEDKVGVIWRCR 2
           +E   K+++VTQVS+GGFG+   A +L+++LED+VG++WRCR
Sbjct: 3   SEGNMKKSVVTQVSIGGFGESTTAKQLTDYLEDEVGIVWRCR 44


>ref|XP_003526410.1| PREDICTED: RNA-dependent RNA polymerase 6-like isoform X1 [Glycine
           max] gi|571459266|ref|XP_006581359.1| PREDICTED:
           RNA-dependent RNA polymerase 6-like isoform X2 [Glycine
           max]
          Length = 1204

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 22/41 (53%), Positives = 34/41 (82%)
 Frame = -2

Query: 124 EKEKKETIVTQVSLGGFGKHVPADELSNFLEDKVGVIWRCR 2
           E  +K+++VTQ+S+GGFG  V A +L N+LEDK+G+++RCR
Sbjct: 4   EGSEKDSVVTQISIGGFGSEVKASDLVNYLEDKIGLVYRCR 44


>ref|XP_003522618.1| PREDICTED: RNA-dependent RNA polymerase 6-like isoform X1 [Glycine
           max] gi|571449461|ref|XP_006578148.1| PREDICTED:
           RNA-dependent RNA polymerase 6-like isoform X2 [Glycine
           max]
          Length = 1204

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 22/41 (53%), Positives = 33/41 (80%)
 Frame = -2

Query: 124 EKEKKETIVTQVSLGGFGKHVPADELSNFLEDKVGVIWRCR 2
           E  +K ++VTQ+S+GGFG  V A +L N+LEDK+G+++RCR
Sbjct: 4   EGSEKGSVVTQISIGGFGSEVKASDLLNYLEDKIGLVYRCR 44


>ref|XP_002308662.1| SILENCING DEFECTIVE 1 family protein [Populus trichocarpa]
           gi|222854638|gb|EEE92185.1| SILENCING DEFECTIVE 1 family
           protein [Populus trichocarpa]
          Length = 1198

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 24/41 (58%), Positives = 31/41 (75%)
 Frame = -2

Query: 124 EKEKKETIVTQVSLGGFGKHVPADELSNFLEDKVGVIWRCR 2
           E   KET+VTQVSLGGF  HV A +L  +LE ++G++WRCR
Sbjct: 4   EGSAKETVVTQVSLGGFDIHVTAKDLLEYLEREIGLVWRCR 44