BLASTX nr result
ID: Sinomenium22_contig00046839
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium22_contig00046839
(260 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002310252.2| hypothetical protein POPTR_0007s13130g [Popu... 121 1e-25
ref|XP_007204122.1| hypothetical protein PRUPE_ppa024755mg [Prun... 119 4e-25
ref|XP_006425640.1| hypothetical protein CICLE_v10025352mg [Citr... 117 2e-24
ref|XP_007029218.1| Tetratricopeptide repeat-like superfamily pr... 117 2e-24
ref|XP_006466829.1| PREDICTED: pentatricopeptide repeat-containi... 116 3e-24
ref|XP_004146551.1| PREDICTED: pentatricopeptide repeat-containi... 114 1e-23
emb|CBI32639.3| unnamed protein product [Vitis vinifera] 114 1e-23
ref|XP_002273763.1| PREDICTED: pentatricopeptide repeat-containi... 114 1e-23
ref|XP_002865063.1| pentatricopeptide repeat-containing protein ... 109 5e-22
ref|NP_201451.1| pentatricopeptide repeat-containing protein [Ar... 108 8e-22
ref|XP_006281458.1| hypothetical protein CARUB_v10027537mg [Caps... 108 1e-21
ref|XP_003594404.1| Pentatricopeptide repeat-containing protein ... 107 2e-21
gb|ADQ43215.1| unknown [Eutrema parvulum] 105 7e-21
ref|XP_006393844.1| hypothetical protein EUTSA_v10003984mg [Eutr... 105 7e-21
ref|XP_004486409.1| PREDICTED: pentatricopeptide repeat-containi... 103 2e-20
ref|XP_006604975.1| PREDICTED: pentatricopeptide repeat-containi... 100 4e-19
ref|XP_003539183.1| PREDICTED: pentatricopeptide repeat-containi... 99 5e-19
ref|XP_007159287.1| hypothetical protein PHAVU_002G225300g [Phas... 98 1e-18
ref|XP_002521555.1| pentatricopeptide repeat-containing protein,... 98 1e-18
gb|ABR16216.1| unknown [Picea sitchensis] 79 5e-13
>ref|XP_002310252.2| hypothetical protein POPTR_0007s13130g [Populus trichocarpa]
gi|550334777|gb|EEE90702.2| hypothetical protein
POPTR_0007s13130g [Populus trichocarpa]
Length = 540
Score = 121 bits (303), Expect = 1e-25
Identities = 59/86 (68%), Positives = 69/86 (80%)
Frame = +1
Query: 1 ETKDVVSWNTMISCYFRHGLVKNALVVFEEMRGERVEFSEVTLSSVLKACASLKALQQGK 180
E +DVV+WN ++S + RHGL K AL VF MR E VE +E TL SVLKACA +KA +QGK
Sbjct: 154 EFRDVVTWNALVSSFLRHGLAKEALGVFRAMRRESVEITEFTLCSVLKACAFIKAFRQGK 213
Query: 181 QVHGLVIVMGRDLLVLGTNLVDFYSN 258
QVHGLVIVMGRDL+VLGT L+DFYSN
Sbjct: 214 QVHGLVIVMGRDLVVLGTALIDFYSN 239
>ref|XP_007204122.1| hypothetical protein PRUPE_ppa024755mg [Prunus persica]
gi|462399653|gb|EMJ05321.1| hypothetical protein
PRUPE_ppa024755mg [Prunus persica]
Length = 497
Score = 119 bits (298), Expect = 4e-25
Identities = 56/85 (65%), Positives = 69/85 (81%)
Frame = +1
Query: 1 ETKDVVSWNTMISCYFRHGLVKNALVVFEEMRGERVEFSEVTLSSVLKACASLKALQQGK 180
E KDVV+WN ++S + RHGL + AL FE MR ERVE SE TL S+LKACASL++ QGK
Sbjct: 103 EFKDVVTWNALLSSFLRHGLAREALGAFEAMREERVEISEFTLCSLLKACASLRSSPQGK 162
Query: 181 QVHGLVIVMGRDLLVLGTNLVDFYS 255
QVHG+V+VMGRD+L+LGT L+DFYS
Sbjct: 163 QVHGMVVVMGRDMLILGTALIDFYS 187
>ref|XP_006425640.1| hypothetical protein CICLE_v10025352mg [Citrus clementina]
gi|557527630|gb|ESR38880.1| hypothetical protein
CICLE_v10025352mg [Citrus clementina]
Length = 527
Score = 117 bits (293), Expect = 2e-24
Identities = 57/85 (67%), Positives = 67/85 (78%)
Frame = +1
Query: 1 ETKDVVSWNTMISCYFRHGLVKNALVVFEEMRGERVEFSEVTLSSVLKACASLKALQQGK 180
E KDVV+WN ++S + RHGL K A VF+ M ERVEFSE TLSSVLKACA LKA + GK
Sbjct: 138 EFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVEFSEFTLSSVLKACAQLKAFRLGK 197
Query: 181 QVHGLVIVMGRDLLVLGTNLVDFYS 255
QVHGLV+V+GRDL+ L T L+DFYS
Sbjct: 198 QVHGLVVVLGRDLVFLSTALIDFYS 222
>ref|XP_007029218.1| Tetratricopeptide repeat-like superfamily protein, putative
[Theobroma cacao] gi|508717823|gb|EOY09720.1|
Tetratricopeptide repeat-like superfamily protein,
putative [Theobroma cacao]
Length = 551
Score = 117 bits (292), Expect = 2e-24
Identities = 56/86 (65%), Positives = 68/86 (79%)
Frame = +1
Query: 1 ETKDVVSWNTMISCYFRHGLVKNALVVFEEMRGERVEFSEVTLSSVLKACASLKALQQGK 180
E KDVV+WN +IS + R GL K AL VF MR ERV+ SE TL SVLK+CASLKA +QGK
Sbjct: 147 ELKDVVTWNALISSFLRQGLAKEALDVFATMRRERVQLSEFTLCSVLKSCASLKAFEQGK 206
Query: 181 QVHGLVIVMGRDLLVLGTNLVDFYSN 258
Q+HGLV+V GRDL++L T L+DFYS+
Sbjct: 207 QIHGLVVVFGRDLVILSTALIDFYSD 232
>ref|XP_006466829.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66500,
mitochondrial-like isoform X1 [Citrus sinensis]
gi|568824902|ref|XP_006466830.1| PREDICTED:
pentatricopeptide repeat-containing protein At5g66500,
mitochondrial-like isoform X2 [Citrus sinensis]
Length = 527
Score = 116 bits (291), Expect = 3e-24
Identities = 57/85 (67%), Positives = 67/85 (78%)
Frame = +1
Query: 1 ETKDVVSWNTMISCYFRHGLVKNALVVFEEMRGERVEFSEVTLSSVLKACASLKALQQGK 180
E KDVV+WN ++S + RHGL K A VF+ M ERVEFSE TLSSVLKACA LKA + GK
Sbjct: 138 EFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVEFSEFTLSSVLKACALLKAFRLGK 197
Query: 181 QVHGLVIVMGRDLLVLGTNLVDFYS 255
QVHGLV+V+GRDL+ L T L+DFYS
Sbjct: 198 QVHGLVVVLGRDLVFLSTALIDFYS 222
>ref|XP_004146551.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66500,
mitochondrial-like [Cucumis sativus]
gi|449529896|ref|XP_004171934.1| PREDICTED:
pentatricopeptide repeat-containing protein At5g66500,
mitochondrial-like [Cucumis sativus]
Length = 544
Score = 114 bits (286), Expect = 1e-23
Identities = 55/86 (63%), Positives = 71/86 (82%)
Frame = +1
Query: 1 ETKDVVSWNTMISCYFRHGLVKNALVVFEEMRGERVEFSEVTLSSVLKACASLKALQQGK 180
E +DVV+WN+++S + R GL + AL VFEEM+ E+VEFSE TL SVLKACA+L+ + GK
Sbjct: 154 EMRDVVAWNSLLSSFLREGLAEEALNVFEEMKREKVEFSEFTLCSVLKACAALEDYRLGK 213
Query: 181 QVHGLVIVMGRDLLVLGTNLVDFYSN 258
QVHG+V+VM RD+LVLGT LVDFYS+
Sbjct: 214 QVHGVVVVMNRDMLVLGTALVDFYSS 239
>emb|CBI32639.3| unnamed protein product [Vitis vinifera]
Length = 459
Score = 114 bits (285), Expect = 1e-23
Identities = 56/84 (66%), Positives = 66/84 (78%)
Frame = +1
Query: 7 KDVVSWNTMISCYFRHGLVKNALVVFEEMRGERVEFSEVTLSSVLKACASLKALQQGKQV 186
KDVV+WNTM+S + RHG + AL VF EM+ E V SE TL S+LKAC LKA QQGKQV
Sbjct: 65 KDVVTWNTMLSSFVRHGRPEEALAVFREMQKEGVWLSEFTLCSLLKACTLLKAFQQGKQV 124
Query: 187 HGLVIVMGRDLLVLGTNLVDFYSN 258
H LV+VMGRDL+VLGT L+DFY+N
Sbjct: 125 HALVVVMGRDLVVLGTALIDFYTN 148
>ref|XP_002273763.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66500,
mitochondrial-like, partial [Vitis vinifera]
Length = 498
Score = 114 bits (285), Expect = 1e-23
Identities = 56/84 (66%), Positives = 66/84 (78%)
Frame = +1
Query: 7 KDVVSWNTMISCYFRHGLVKNALVVFEEMRGERVEFSEVTLSSVLKACASLKALQQGKQV 186
KDVV+WNTM+S + RHG + AL VF EM+ E V SE TL S+LKAC LKA QQGKQV
Sbjct: 104 KDVVTWNTMLSSFVRHGRPEEALAVFREMQKEGVWLSEFTLCSLLKACTLLKAFQQGKQV 163
Query: 187 HGLVIVMGRDLLVLGTNLVDFYSN 258
H LV+VMGRDL+VLGT L+DFY+N
Sbjct: 164 HALVVVMGRDLVVLGTALIDFYTN 187
>ref|XP_002865063.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297310898|gb|EFH41322.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 532
Score = 109 bits (272), Expect = 5e-22
Identities = 56/86 (65%), Positives = 66/86 (76%)
Frame = +1
Query: 1 ETKDVVSWNTMISCYFRHGLVKNALVVFEEMRGERVEFSEVTLSSVLKACASLKALQQGK 180
E KDVVSWN ++S + R+G K AL VF M ERVE SE TLSSV+K CASLK LQQGK
Sbjct: 146 EEKDVVSWNALLSGFLRNGKGKEALGVFAAMCRERVEISEFTLSSVVKTCASLKILQQGK 205
Query: 181 QVHGLVIVMGRDLLVLGTNLVDFYSN 258
QVH +V+V GRDL+VLGT L+ FYS+
Sbjct: 206 QVHAMVMVTGRDLVVLGTALISFYSS 231
>ref|NP_201451.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171135|sp|Q9FJY9.1|PP448_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At5g66500, mitochondrial; Flags: Precursor
gi|10177531|dbj|BAB10926.1| unnamed protein product
[Arabidopsis thaliana] gi|332010838|gb|AED98221.1|
pentatricopeptide repeat-containing protein [Arabidopsis
thaliana]
Length = 532
Score = 108 bits (270), Expect = 8e-22
Identities = 54/86 (62%), Positives = 66/86 (76%)
Frame = +1
Query: 1 ETKDVVSWNTMISCYFRHGLVKNALVVFEEMRGERVEFSEVTLSSVLKACASLKALQQGK 180
E KD+VSWN ++S + R+G K AL VF M ERVE SE TLSSV+K CASLK LQQGK
Sbjct: 146 EEKDLVSWNALLSGFLRNGKGKEALGVFAAMYRERVEISEFTLSSVVKTCASLKILQQGK 205
Query: 181 QVHGLVIVMGRDLLVLGTNLVDFYSN 258
QVH +V+V GRDL+VLGT ++ FYS+
Sbjct: 206 QVHAMVVVTGRDLVVLGTAMISFYSS 231
>ref|XP_006281458.1| hypothetical protein CARUB_v10027537mg [Capsella rubella]
gi|482550162|gb|EOA14356.1| hypothetical protein
CARUB_v10027537mg [Capsella rubella]
Length = 530
Score = 108 bits (269), Expect = 1e-21
Identities = 54/86 (62%), Positives = 67/86 (77%)
Frame = +1
Query: 1 ETKDVVSWNTMISCYFRHGLVKNALVVFEEMRGERVEFSEVTLSSVLKACASLKALQQGK 180
E KDVVSWN ++S + R+G + AL VF M ERVE SE TLSSV+K CASLK LQQGK
Sbjct: 144 EEKDVVSWNALLSGFLRNGKGQEALGVFAAMYRERVEISEFTLSSVVKTCASLKILQQGK 203
Query: 181 QVHGLVIVMGRDLLVLGTNLVDFYSN 258
QVH +V+V GRDL+VLGT +++FYS+
Sbjct: 204 QVHSMVLVTGRDLVVLGTAMINFYSS 229
>ref|XP_003594404.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355483452|gb|AES64655.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 516
Score = 107 bits (266), Expect = 2e-21
Identities = 52/84 (61%), Positives = 64/84 (76%)
Frame = +1
Query: 7 KDVVSWNTMISCYFRHGLVKNALVVFEEMRGERVEFSEVTLSSVLKACASLKALQQGKQV 186
+DVV+WNT++SC+ R G A+ V EM E VE SE TL SVLK CASLKAL+ G+QV
Sbjct: 122 RDVVAWNTLLSCFLRCGKPDEAIRVLREMGRENVEMSEFTLCSVLKCCASLKALEFGRQV 181
Query: 187 HGLVIVMGRDLLVLGTNLVDFYSN 258
HGLV+ MGRDL+VL T L+DFYS+
Sbjct: 182 HGLVVAMGRDLVVLSTALIDFYSS 205
>gb|ADQ43215.1| unknown [Eutrema parvulum]
Length = 527
Score = 105 bits (262), Expect = 7e-21
Identities = 52/86 (60%), Positives = 65/86 (75%)
Frame = +1
Query: 1 ETKDVVSWNTMISCYFRHGLVKNALVVFEEMRGERVEFSEVTLSSVLKACASLKALQQGK 180
E KDVVSWN ++S + R+G K AL +F M E+VE SE TL SV+K CASLK LQQGK
Sbjct: 141 EDKDVVSWNALLSGFLRNGKGKEALGLFAAMYREKVEISEFTLCSVVKTCASLKILQQGK 200
Query: 181 QVHGLVIVMGRDLLVLGTNLVDFYSN 258
QVH +V+V GRDL+VLGT ++ FYS+
Sbjct: 201 QVHAMVVVTGRDLVVLGTAIISFYSS 226
>ref|XP_006393844.1| hypothetical protein EUTSA_v10003984mg [Eutrema salsugineum]
gi|78499702|gb|ABB45856.1| hypothetical protein [Eutrema
halophilum] gi|557090483|gb|ESQ31130.1| hypothetical
protein EUTSA_v10003984mg [Eutrema salsugineum]
Length = 527
Score = 105 bits (262), Expect = 7e-21
Identities = 52/86 (60%), Positives = 65/86 (75%)
Frame = +1
Query: 1 ETKDVVSWNTMISCYFRHGLVKNALVVFEEMRGERVEFSEVTLSSVLKACASLKALQQGK 180
E KDVVSWN+++S + R+G K AL VF M E +E SE TL SV+K CASLK LQQGK
Sbjct: 141 EDKDVVSWNSLLSGFLRNGKGKEALGVFAAMYRETIEISEFTLCSVVKTCASLKILQQGK 200
Query: 181 QVHGLVIVMGRDLLVLGTNLVDFYSN 258
QVH +V+V GRDL+VLGT ++ FYS+
Sbjct: 201 QVHAMVVVTGRDLVVLGTAIISFYSS 226
>ref|XP_004486409.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66500,
mitochondrial-like [Cicer arietinum]
Length = 528
Score = 103 bits (258), Expect = 2e-20
Identities = 50/84 (59%), Positives = 64/84 (76%)
Frame = +1
Query: 7 KDVVSWNTMISCYFRHGLVKNALVVFEEMRGERVEFSEVTLSSVLKACASLKALQQGKQV 186
KDVV+WN ++SC+ R G + A+ V M E VE SE TL SVLK CASLKAL+ G+QV
Sbjct: 128 KDVVAWNALLSCFLRCGHPREAVGVLRAMGRENVELSEFTLCSVLKCCASLKALELGRQV 187
Query: 187 HGLVIVMGRDLLVLGTNLVDFYSN 258
HGLV+++GRDL+VL T L+DFYS+
Sbjct: 188 HGLVVLLGRDLVVLSTALIDFYSS 211
>ref|XP_006604975.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66500,
mitochondrial-like, partial [Glycine max]
Length = 547
Score = 99.8 bits (247), Expect = 4e-19
Identities = 49/84 (58%), Positives = 62/84 (73%)
Frame = +1
Query: 7 KDVVSWNTMISCYFRHGLVKNALVVFEEMRGERVEFSEVTLSSVLKACASLKALQQGKQV 186
+DVV+WN ++SC+ R L A+ V EM E VE SE TL S LK+CA LKAL+ G+QV
Sbjct: 151 RDVVAWNALLSCFLRCDLPVEAVGVLREMGRENVELSEFTLCSALKSCALLKALELGRQV 210
Query: 187 HGLVIVMGRDLLVLGTNLVDFYSN 258
HGLV+ MGRDL+VL T LVDFY++
Sbjct: 211 HGLVVCMGRDLVVLSTALVDFYTS 234
>ref|XP_003539183.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66500,
mitochondrial-like isoform X1 [Glycine max]
gi|571489039|ref|XP_006591097.1| PREDICTED:
pentatricopeptide repeat-containing protein At5g66500,
mitochondrial-like isoform X2 [Glycine max]
Length = 547
Score = 99.4 bits (246), Expect = 5e-19
Identities = 49/84 (58%), Positives = 61/84 (72%)
Frame = +1
Query: 7 KDVVSWNTMISCYFRHGLVKNALVVFEEMRGERVEFSEVTLSSVLKACASLKALQQGKQV 186
+DVV+WN ++SC+ R A V EM E VE SE TL S LK+CASLKAL+ G+QV
Sbjct: 151 RDVVAWNALLSCFLRCDRPVEAFGVLREMGRENVELSEFTLCSALKSCASLKALELGRQV 210
Query: 187 HGLVIVMGRDLLVLGTNLVDFYSN 258
HGLV+ MGRDL+VL T LVDFY++
Sbjct: 211 HGLVVCMGRDLVVLSTALVDFYTS 234
>ref|XP_007159287.1| hypothetical protein PHAVU_002G225300g [Phaseolus vulgaris]
gi|561032702|gb|ESW31281.1| hypothetical protein
PHAVU_002G225300g [Phaseolus vulgaris]
Length = 551
Score = 97.8 bits (242), Expect = 1e-18
Identities = 47/84 (55%), Positives = 61/84 (72%)
Frame = +1
Query: 7 KDVVSWNTMISCYFRHGLVKNALVVFEEMRGERVEFSEVTLSSVLKACASLKALQQGKQV 186
+DVV+WN ++SC+ R L A+ V M E VE SE TL S LK CASL+AL+ G+QV
Sbjct: 154 RDVVAWNALLSCFLRCDLPVEAVGVLRAMGRENVEVSEFTLCSALKCCASLRALELGRQV 213
Query: 187 HGLVIVMGRDLLVLGTNLVDFYSN 258
HGLV+ MGRD++VL T L+DFYS+
Sbjct: 214 HGLVVCMGRDMVVLSTALIDFYSS 237
>ref|XP_002521555.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223539233|gb|EEF40826.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 418
Score = 97.8 bits (242), Expect = 1e-18
Identities = 51/86 (59%), Positives = 64/86 (74%), Gaps = 1/86 (1%)
Frame = +1
Query: 1 ETKDVVSWNTMISCYFRHGLVKNALVVFEEMRGERVEFSEVTLSSVLKACASLKALQQGK 180
E +DVV+WN+++S + RHGL AL +F MR E VEFSE TL SVLKACA++KA QGK
Sbjct: 140 EFRDVVTWNSLLSSFLRHGLSNKALGIFGAMRREGVEFSEFTLCSVLKACAAVKAFSQGK 199
Query: 181 QVHGLVIVMGRDL-LVLGTNLVDFYS 255
QVHGLV + + +VLGT L+DFYS
Sbjct: 200 QVHGLVGLSWAVIWVVLGTALIDFYS 225
>gb|ABR16216.1| unknown [Picea sitchensis]
Length = 394
Score = 79.3 bits (194), Expect = 5e-13
Identities = 40/84 (47%), Positives = 58/84 (69%), Gaps = 1/84 (1%)
Frame = +1
Query: 7 KDVVSWNTMISCYFRHGLVKNALVVFEEMRGERVEFSEVTLSSVLKACASLKALQQGKQV 186
+++VSW M+S Y + G AL +F EM+GE V+ + VT++SVL ACA L LQQGK++
Sbjct: 177 RNLVSWTAMVSGYAQGGFADEALRMFYEMQGEDVKANYVTVASVLPACAQLSDLQQGKEI 236
Query: 187 HGLVIVMGRDL-LVLGTNLVDFYS 255
HG +I G DL +V+G L+D Y+
Sbjct: 237 HGYIIRRGLDLGIVVGNALIDMYA 260
Score = 63.5 bits (153), Expect = 3e-08
Identities = 27/63 (42%), Positives = 47/63 (74%)
Frame = +1
Query: 10 DVVSWNTMISCYFRHGLVKNALVVFEEMRGERVEFSEVTLSSVLKACASLKALQQGKQVH 189
DV++WNT+I+ Y ++G L +F++M+ V+ + +T++SVL ACA++ ALQ+GK++H
Sbjct: 314 DVITWNTLITAYAQNGYGDQTLELFQQMQLRGVKPNSITIASVLSACAAVSALQEGKRIH 373
Query: 190 GLV 198
LV
Sbjct: 374 DLV 376