BLASTX nr result
ID: Sinomenium22_contig00046371
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium22_contig00046371
(256 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002315792.2| hypothetical protein POPTR_0010s10230g [Popu... 140 1e-31
gb|EXB55009.1| DEAD-box ATP-dependent RNA helicase 58 [Morus not... 136 3e-30
ref|XP_006349223.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 135 6e-30
ref|XP_004229420.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 135 6e-30
ref|XP_006489326.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 134 1e-29
ref|XP_006419853.1| hypothetical protein CICLE_v10004897mg [Citr... 134 1e-29
ref|XP_007222883.1| hypothetical protein PRUPE_ppa005191mg [Prun... 134 1e-29
gb|AAG34873.1|AF261020_1 putative chloroplast RNA helicase VDL i... 133 2e-29
ref|XP_002277780.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 133 2e-29
emb|CBI26203.3| unnamed protein product [Vitis vinifera] 133 2e-29
ref|XP_004296920.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 133 3e-29
ref|XP_007034658.1| P-loop containing nucleoside triphosphate hy... 130 2e-28
ref|XP_007034657.1| P-loop containing nucleoside triphosphate hy... 130 2e-28
ref|XP_007034656.1| P-loop containing nucleoside triphosphate hy... 130 2e-28
ref|XP_006400479.1| hypothetical protein EUTSA_v10013438mg [Eutr... 129 3e-28
gb|AAG38497.1|AF261032_5 putative chloroplast RNA helicase VDL' ... 128 7e-28
gb|AAG38498.1|AF261032_6 putative chloroplast RNA helicase VDL' ... 128 7e-28
gb|AAG34879.1|AF261024_1 putative chloroplast RNA helicase VDL' ... 128 7e-28
gb|AAG34884.1|AF261029_1 putative chloroplast RNA helicase VDL' ... 128 7e-28
gb|AAG38493.1|AF261032_1 putative chloroplast RNA helicase VDL' ... 128 7e-28
>ref|XP_002315792.2| hypothetical protein POPTR_0010s10230g [Populus trichocarpa]
gi|550329495|gb|EEF01963.2| hypothetical protein
POPTR_0010s10230g [Populus trichocarpa]
Length = 477
Score = 140 bits (354), Expect = 1e-31
Identities = 70/84 (83%), Positives = 77/84 (91%)
Frame = +3
Query: 3 GSGKTLAYLLLIFSIINVQRSTVQALIVVPTRELGMQVTKVARMLAANPLESESVGRICT 182
GSGKTLAYLLLIFS+IN QRS VQALIVVPTRELG+QVTKVARMLAA P E+++ + CT
Sbjct: 125 GSGKTLAYLLLIFSVINTQRSAVQALIVVPTRELGIQVTKVARMLAATPTENDAEQKSCT 184
Query: 183 VMALLDGGLLRRHKSWLKAEPPTI 254
VMALLDGG+LRRHKSWLKAEPPTI
Sbjct: 185 VMALLDGGMLRRHKSWLKAEPPTI 208
>gb|EXB55009.1| DEAD-box ATP-dependent RNA helicase 58 [Morus notabilis]
Length = 464
Score = 136 bits (342), Expect = 3e-30
Identities = 67/84 (79%), Positives = 74/84 (88%)
Frame = +3
Query: 3 GSGKTLAYLLLIFSIINVQRSTVQALIVVPTRELGMQVTKVARMLAANPLESESVGRICT 182
GSGKTL YLLLIFS++N QRS VQALIVVPTRELGMQVTKVAR LAA P+ES+ + C+
Sbjct: 112 GSGKTLTYLLLIFSVVNTQRSAVQALIVVPTRELGMQVTKVARTLAAKPMESDLEQKSCS 171
Query: 183 VMALLDGGLLRRHKSWLKAEPPTI 254
VMALLDGG LRRHKSWLKAEPPT+
Sbjct: 172 VMALLDGGTLRRHKSWLKAEPPTV 195
>ref|XP_006349223.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 58,
chloroplastic-like [Solanum tuberosum]
Length = 462
Score = 135 bits (340), Expect = 6e-30
Identities = 68/84 (80%), Positives = 75/84 (89%)
Frame = +3
Query: 3 GSGKTLAYLLLIFSIINVQRSTVQALIVVPTRELGMQVTKVARMLAANPLESESVGRICT 182
GSGKTLAYLL + S+++ QRS VQALIVVPTRELGMQVTKVARMLAANP E ES + CT
Sbjct: 107 GSGKTLAYLLQVLSVVDSQRSAVQALIVVPTRELGMQVTKVARMLAANPSEHESGLKSCT 166
Query: 183 VMALLDGGLLRRHKSWLKAEPPTI 254
VMALLDGG+L+RHKSWLKAEPPTI
Sbjct: 167 VMALLDGGMLKRHKSWLKAEPPTI 190
>ref|XP_004229420.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 58,
chloroplastic-like [Solanum lycopersicum]
Length = 459
Score = 135 bits (340), Expect = 6e-30
Identities = 68/84 (80%), Positives = 75/84 (89%)
Frame = +3
Query: 3 GSGKTLAYLLLIFSIINVQRSTVQALIVVPTRELGMQVTKVARMLAANPLESESVGRICT 182
GSGKTLAYLL + S+++ QRS VQALIVVPTRELGMQVTKVARMLAANP E ES + CT
Sbjct: 107 GSGKTLAYLLQVLSVVDSQRSAVQALIVVPTRELGMQVTKVARMLAANPSEHESGLKSCT 166
Query: 183 VMALLDGGLLRRHKSWLKAEPPTI 254
VMALLDGG+L+RHKSWLKAEPPTI
Sbjct: 167 VMALLDGGMLKRHKSWLKAEPPTI 190
>ref|XP_006489326.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 58,
chloroplastic-like isoform X1 [Citrus sinensis]
Length = 473
Score = 134 bits (337), Expect = 1e-29
Identities = 66/84 (78%), Positives = 75/84 (89%)
Frame = +3
Query: 3 GSGKTLAYLLLIFSIINVQRSTVQALIVVPTRELGMQVTKVARMLAANPLESESVGRICT 182
GSGKTL YLLLIFS++N QRS VQA+IVVPTRELGMQVTKVAR+LAA P +++ + CT
Sbjct: 117 GSGKTLTYLLLIFSLVNAQRSAVQAVIVVPTRELGMQVTKVARVLAAKPSDTDLEHKPCT 176
Query: 183 VMALLDGGLLRRHKSWLKAEPPTI 254
VMALLDGG+LRRHKSWLKAEPPTI
Sbjct: 177 VMALLDGGMLRRHKSWLKAEPPTI 200
>ref|XP_006419853.1| hypothetical protein CICLE_v10004897mg [Citrus clementina]
gi|557521726|gb|ESR33093.1| hypothetical protein
CICLE_v10004897mg [Citrus clementina]
Length = 473
Score = 134 bits (337), Expect = 1e-29
Identities = 66/84 (78%), Positives = 75/84 (89%)
Frame = +3
Query: 3 GSGKTLAYLLLIFSIINVQRSTVQALIVVPTRELGMQVTKVARMLAANPLESESVGRICT 182
GSGKTL YLLLIFS++N QRS VQA+IVVPTRELGMQVTKVAR+LAA P +++ + CT
Sbjct: 117 GSGKTLTYLLLIFSLVNAQRSAVQAVIVVPTRELGMQVTKVARVLAAKPSDTDLEHKPCT 176
Query: 183 VMALLDGGLLRRHKSWLKAEPPTI 254
VMALLDGG+LRRHKSWLKAEPPTI
Sbjct: 177 VMALLDGGMLRRHKSWLKAEPPTI 200
>ref|XP_007222883.1| hypothetical protein PRUPE_ppa005191mg [Prunus persica]
gi|462419819|gb|EMJ24082.1| hypothetical protein
PRUPE_ppa005191mg [Prunus persica]
Length = 473
Score = 134 bits (337), Expect = 1e-29
Identities = 67/84 (79%), Positives = 72/84 (85%)
Frame = +3
Query: 3 GSGKTLAYLLLIFSIINVQRSTVQALIVVPTRELGMQVTKVARMLAANPLESESVGRICT 182
GSGKTL YLLL+FSI+N +RS VQALIVVPTRELGMQVTKVARMLA P E E + CT
Sbjct: 122 GSGKTLTYLLLVFSIVNARRSAVQALIVVPTRELGMQVTKVARMLATKPKEGELEQKSCT 181
Query: 183 VMALLDGGLLRRHKSWLKAEPPTI 254
VMALLDGG+L RHKSWLKAEPPTI
Sbjct: 182 VMALLDGGMLMRHKSWLKAEPPTI 205
>gb|AAG34873.1|AF261020_1 putative chloroplast RNA helicase VDL isoform 1 [Nicotiana tabacum]
gi|11385590|gb|AAG34876.1|AF261021_1 putative
chloroplast RNA helicase VDL isoform 1 [Nicotiana
tabacum]
Length = 466
Score = 133 bits (335), Expect = 2e-29
Identities = 69/84 (82%), Positives = 73/84 (86%)
Frame = +3
Query: 3 GSGKTLAYLLLIFSIINVQRSTVQALIVVPTRELGMQVTKVARMLAANPLESESVGRICT 182
GSGKTLAYLL I S+I+ QRS VQALIVVPTRELGMQVTKVARMLAA P E ES + CT
Sbjct: 114 GSGKTLAYLLQILSVIDSQRSAVQALIVVPTRELGMQVTKVARMLAAKPSELESGPKSCT 173
Query: 183 VMALLDGGLLRRHKSWLKAEPPTI 254
VMALLDGG+L RHKSWLKAEPPTI
Sbjct: 174 VMALLDGGMLNRHKSWLKAEPPTI 197
>ref|XP_002277780.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 58,
chloroplastic-like [Vitis vinifera]
Length = 482
Score = 133 bits (335), Expect = 2e-29
Identities = 66/84 (78%), Positives = 74/84 (88%)
Frame = +3
Query: 3 GSGKTLAYLLLIFSIINVQRSTVQALIVVPTRELGMQVTKVARMLAANPLESESVGRICT 182
GSGKTL YLLLIFS++N + S VQALIVVPTRELG+QVTKVARMLAA P+E E + CT
Sbjct: 126 GSGKTLTYLLLIFSVVNTKISAVQALIVVPTRELGIQVTKVARMLAAKPMEPELEQKSCT 185
Query: 183 VMALLDGGLLRRHKSWLKAEPPTI 254
VMALLDGG+L+RHKSWLKAEPPTI
Sbjct: 186 VMALLDGGMLKRHKSWLKAEPPTI 209
>emb|CBI26203.3| unnamed protein product [Vitis vinifera]
Length = 486
Score = 133 bits (335), Expect = 2e-29
Identities = 66/84 (78%), Positives = 74/84 (88%)
Frame = +3
Query: 3 GSGKTLAYLLLIFSIINVQRSTVQALIVVPTRELGMQVTKVARMLAANPLESESVGRICT 182
GSGKTL YLLLIFS++N + S VQALIVVPTRELG+QVTKVARMLAA P+E E + CT
Sbjct: 130 GSGKTLTYLLLIFSVVNTKISAVQALIVVPTRELGIQVTKVARMLAAKPMEPELEQKSCT 189
Query: 183 VMALLDGGLLRRHKSWLKAEPPTI 254
VMALLDGG+L+RHKSWLKAEPPTI
Sbjct: 190 VMALLDGGMLKRHKSWLKAEPPTI 213
>ref|XP_004296920.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 58,
chloroplastic-like [Fragaria vesca subsp. vesca]
Length = 395
Score = 133 bits (334), Expect = 3e-29
Identities = 66/84 (78%), Positives = 72/84 (85%)
Frame = +3
Query: 3 GSGKTLAYLLLIFSIINVQRSTVQALIVVPTRELGMQVTKVARMLAANPLESESVGRICT 182
GSGKTL YLLLIF+++ QRS VQALIVVPTRELGMQVT+VARMLAA P E E + CT
Sbjct: 44 GSGKTLTYLLLIFAVVKTQRSAVQALIVVPTRELGMQVTRVARMLAAKPKEGEVEQKACT 103
Query: 183 VMALLDGGLLRRHKSWLKAEPPTI 254
VMALLDGG+L RHKSWLKAEPPTI
Sbjct: 104 VMALLDGGMLTRHKSWLKAEPPTI 127
>ref|XP_007034658.1| P-loop containing nucleoside triphosphate hydrolases superfamily
protein isoform 3 [Theobroma cacao]
gi|508713687|gb|EOY05584.1| P-loop containing nucleoside
triphosphate hydrolases superfamily protein isoform 3
[Theobroma cacao]
Length = 351
Score = 130 bits (327), Expect = 2e-28
Identities = 66/84 (78%), Positives = 73/84 (86%)
Frame = +3
Query: 3 GSGKTLAYLLLIFSIINVQRSTVQALIVVPTRELGMQVTKVARMLAANPLESESVGRICT 182
GSGKTL YLLLI+S+IN +RS VQALIVVPTRELGMQVTKVARMLAA P++ E + T
Sbjct: 121 GSGKTLTYLLLIYSVINPKRSAVQALIVVPTRELGMQVTKVARMLAAKPMDPEVEQKSYT 180
Query: 183 VMALLDGGLLRRHKSWLKAEPPTI 254
VMALLDGG+LRRHKSWLKAEPP I
Sbjct: 181 VMALLDGGMLRRHKSWLKAEPPNI 204
>ref|XP_007034657.1| P-loop containing nucleoside triphosphate hydrolases superfamily
protein isoform 2 [Theobroma cacao]
gi|508713686|gb|EOY05583.1| P-loop containing nucleoside
triphosphate hydrolases superfamily protein isoform 2
[Theobroma cacao]
Length = 409
Score = 130 bits (327), Expect = 2e-28
Identities = 66/84 (78%), Positives = 73/84 (86%)
Frame = +3
Query: 3 GSGKTLAYLLLIFSIINVQRSTVQALIVVPTRELGMQVTKVARMLAANPLESESVGRICT 182
GSGKTL YLLLI+S+IN +RS VQALIVVPTRELGMQVTKVARMLAA P++ E + T
Sbjct: 121 GSGKTLTYLLLIYSVINPKRSAVQALIVVPTRELGMQVTKVARMLAAKPMDPEVEQKSYT 180
Query: 183 VMALLDGGLLRRHKSWLKAEPPTI 254
VMALLDGG+LRRHKSWLKAEPP I
Sbjct: 181 VMALLDGGMLRRHKSWLKAEPPNI 204
>ref|XP_007034656.1| P-loop containing nucleoside triphosphate hydrolases superfamily
protein isoform 1 [Theobroma cacao]
gi|508713685|gb|EOY05582.1| P-loop containing nucleoside
triphosphate hydrolases superfamily protein isoform 1
[Theobroma cacao]
Length = 477
Score = 130 bits (327), Expect = 2e-28
Identities = 66/84 (78%), Positives = 73/84 (86%)
Frame = +3
Query: 3 GSGKTLAYLLLIFSIINVQRSTVQALIVVPTRELGMQVTKVARMLAANPLESESVGRICT 182
GSGKTL YLLLI+S+IN +RS VQALIVVPTRELGMQVTKVARMLAA P++ E + T
Sbjct: 121 GSGKTLTYLLLIYSVINPKRSAVQALIVVPTRELGMQVTKVARMLAAKPMDPEVEQKSYT 180
Query: 183 VMALLDGGLLRRHKSWLKAEPPTI 254
VMALLDGG+LRRHKSWLKAEPP I
Sbjct: 181 VMALLDGGMLRRHKSWLKAEPPNI 204
>ref|XP_006400479.1| hypothetical protein EUTSA_v10013438mg [Eutrema salsugineum]
gi|557101569|gb|ESQ41932.1| hypothetical protein
EUTSA_v10013438mg [Eutrema salsugineum]
Length = 473
Score = 129 bits (325), Expect = 3e-28
Identities = 68/84 (80%), Positives = 73/84 (86%)
Frame = +3
Query: 3 GSGKTLAYLLLIFSIINVQRSTVQALIVVPTRELGMQVTKVARMLAANPLESESVGRICT 182
GSGKTL YLLLIFS+IN QRS+VQA+IVVPTRELGMQVTKVARMLAA + E G CT
Sbjct: 123 GSGKTLTYLLLIFSLINPQRSSVQAVIVVPTRELGMQVTKVARMLAAKSTDIEVKG--CT 180
Query: 183 VMALLDGGLLRRHKSWLKAEPPTI 254
VMALLDGG+LRRHKSWLKAEPP I
Sbjct: 181 VMALLDGGMLRRHKSWLKAEPPAI 204
>gb|AAG38497.1|AF261032_5 putative chloroplast RNA helicase VDL' isoform 5 [Nicotiana
tabacum]
Length = 289
Score = 128 bits (322), Expect = 7e-28
Identities = 66/84 (78%), Positives = 72/84 (85%)
Frame = +3
Query: 3 GSGKTLAYLLLIFSIINVQRSTVQALIVVPTRELGMQVTKVARMLAANPLESESVGRICT 182
GSGKTLAYLL + S+I+ QRS VQALIVVPTRELGMQVTKVAR LAA P E +S + CT
Sbjct: 114 GSGKTLAYLLQMLSVIDSQRSAVQALIVVPTRELGMQVTKVARTLAAKPSELKSGPKSCT 173
Query: 183 VMALLDGGLLRRHKSWLKAEPPTI 254
VMALLDGG+L RHKSWLKAEPPTI
Sbjct: 174 VMALLDGGMLNRHKSWLKAEPPTI 197
>gb|AAG38498.1|AF261032_6 putative chloroplast RNA helicase VDL' isoform 6 [Nicotiana
tabacum]
Length = 226
Score = 128 bits (322), Expect = 7e-28
Identities = 66/84 (78%), Positives = 72/84 (85%)
Frame = +3
Query: 3 GSGKTLAYLLLIFSIINVQRSTVQALIVVPTRELGMQVTKVARMLAANPLESESVGRICT 182
GSGKTLAYLL + S+I+ QRS VQALIVVPTRELGMQVTKVAR LAA P E +S + CT
Sbjct: 114 GSGKTLAYLLQMLSVIDSQRSAVQALIVVPTRELGMQVTKVARTLAAKPSELKSGPKSCT 173
Query: 183 VMALLDGGLLRRHKSWLKAEPPTI 254
VMALLDGG+L RHKSWLKAEPPTI
Sbjct: 174 VMALLDGGMLNRHKSWLKAEPPTI 197
>gb|AAG34879.1|AF261024_1 putative chloroplast RNA helicase VDL' isoform 1 [Nicotiana
tabacum]
Length = 466
Score = 128 bits (322), Expect = 7e-28
Identities = 66/84 (78%), Positives = 72/84 (85%)
Frame = +3
Query: 3 GSGKTLAYLLLIFSIINVQRSTVQALIVVPTRELGMQVTKVARMLAANPLESESVGRICT 182
GSGKTLAYLL + S+I+ QRS VQALIVVPTRELGMQVTKVAR LAA P E +S + CT
Sbjct: 114 GSGKTLAYLLQMLSVIDSQRSAVQALIVVPTRELGMQVTKVARTLAAKPSELKSGPKSCT 173
Query: 183 VMALLDGGLLRRHKSWLKAEPPTI 254
VMALLDGG+L RHKSWLKAEPPTI
Sbjct: 174 VMALLDGGMLNRHKSWLKAEPPTI 197
>gb|AAG34884.1|AF261029_1 putative chloroplast RNA helicase VDL' isoform 6 [Nicotiana
tabacum]
Length = 294
Score = 128 bits (322), Expect = 7e-28
Identities = 66/84 (78%), Positives = 72/84 (85%)
Frame = +3
Query: 3 GSGKTLAYLLLIFSIINVQRSTVQALIVVPTRELGMQVTKVARMLAANPLESESVGRICT 182
GSGKTLAYLL + S+I+ QRS VQALIVVPTRELGMQVTKVAR LAA P E +S + CT
Sbjct: 114 GSGKTLAYLLQMLSVIDSQRSAVQALIVVPTRELGMQVTKVARTLAAKPSELKSGPKSCT 173
Query: 183 VMALLDGGLLRRHKSWLKAEPPTI 254
VMALLDGG+L RHKSWLKAEPPTI
Sbjct: 174 VMALLDGGMLNRHKSWLKAEPPTI 197
>gb|AAG38493.1|AF261032_1 putative chloroplast RNA helicase VDL' isoform 1 [Nicotiana
tabacum]
Length = 365
Score = 128 bits (322), Expect = 7e-28
Identities = 66/84 (78%), Positives = 72/84 (85%)
Frame = +3
Query: 3 GSGKTLAYLLLIFSIINVQRSTVQALIVVPTRELGMQVTKVARMLAANPLESESVGRICT 182
GSGKTLAYLL + S+I+ QRS VQALIVVPTRELGMQVTKVAR LAA P E +S + CT
Sbjct: 114 GSGKTLAYLLQMLSVIDSQRSAVQALIVVPTRELGMQVTKVARTLAAKPSELKSGPKSCT 173
Query: 183 VMALLDGGLLRRHKSWLKAEPPTI 254
VMALLDGG+L RHKSWLKAEPPTI
Sbjct: 174 VMALLDGGMLNRHKSWLKAEPPTI 197