BLASTX nr result
ID: Sinomenium22_contig00046010
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium22_contig00046010
(289 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004487183.1| PREDICTED: pentatricopeptide repeat-containi... 77 3e-12
ref|XP_003540386.1| PREDICTED: pentatricopeptide repeat-containi... 77 3e-12
ref|XP_007214673.1| hypothetical protein PRUPE_ppa021626mg [Prun... 75 1e-11
ref|XP_006469053.1| PREDICTED: pentatricopeptide repeat-containi... 73 4e-11
ref|XP_007149786.1| hypothetical protein PHAVU_005G098700g [Phas... 73 4e-11
ref|XP_006446741.1| hypothetical protein CICLE_v10017507mg [Citr... 73 4e-11
ref|XP_007019848.1| Pentatricopeptide repeat-containing protein ... 72 8e-11
ref|XP_002278909.1| PREDICTED: pentatricopeptide repeat-containi... 70 2e-10
ref|XP_006376410.1| pentatricopeptide repeat-containing family p... 69 5e-10
ref|XP_004307287.1| PREDICTED: pentatricopeptide repeat-containi... 68 1e-09
ref|XP_002525148.1| pentatricopeptide repeat-containing protein,... 65 7e-09
ref|XP_006354630.1| PREDICTED: pentatricopeptide repeat-containi... 64 2e-08
ref|XP_006354624.1| PREDICTED: pentatricopeptide repeat-containi... 64 2e-08
gb|EXB79007.1| hypothetical protein L484_001451 [Morus notabilis] 64 3e-08
ref|XP_006305261.1| hypothetical protein CARUB_v10009635mg [Caps... 63 4e-08
ref|NP_563765.1| pentatricopeptide repeat-containing protein [Ar... 63 5e-08
ref|XP_002892331.1| pentatricopeptide repeat-containing protein ... 63 5e-08
ref|XP_004139374.1| PREDICTED: pentatricopeptide repeat-containi... 62 6e-08
ref|XP_004229701.1| PREDICTED: pentatricopeptide repeat-containi... 61 1e-07
ref|XP_006417939.1| hypothetical protein EUTSA_v10008110mg [Eutr... 61 2e-07
>ref|XP_004487183.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g06270-like isoform X1 [Cicer arietinum]
gi|502082497|ref|XP_004487184.1| PREDICTED:
pentatricopeptide repeat-containing protein
At1g06270-like isoform X2 [Cicer arietinum]
Length = 338
Score = 76.6 bits (187), Expect = 3e-12
Identities = 42/97 (43%), Positives = 54/97 (55%), Gaps = 1/97 (1%)
Frame = +1
Query: 1 GAMCGSRRTHEAERLLMEMV-GFGLTPRQGTVTKVLXXXXXXXXXXXXXXXXXXXXXGGI 177
GAMC RRT +A+ L+ +MV +GLTP GTV KVL G
Sbjct: 209 GAMCKVRRTADAQDLMKQMVVKYGLTPDHGTVVKVLAALRANKEIWKAVEIIEFLEIEGN 268
Query: 178 RVGFEGYEEVVKGCVERREFVLGAEVVVEMVERGFVP 288
VGFE YE ++GC+E RE+VL +V + M ERGF+P
Sbjct: 269 SVGFESYELAIEGCLETREYVLAGKVAMGMTERGFIP 305
>ref|XP_003540386.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g06270-like isoform X1 [Glycine max]
Length = 342
Score = 76.6 bits (187), Expect = 3e-12
Identities = 42/97 (43%), Positives = 56/97 (57%), Gaps = 1/97 (1%)
Frame = +1
Query: 1 GAMCGSRRTHEAERLLMEMV-GFGLTPRQGTVTKVLXXXXXXXXXXXXXXXXXXXXXGGI 177
GAMC R+T +A L+ +MV +GLTP QGT+ K+L G
Sbjct: 213 GAMCRVRKTAKALDLMKQMVVQYGLTPGQGTLVKLLAALRANREIWKAVEMIEFLEKEGN 272
Query: 178 RVGFEGYEEVVKGCVERREFVLGAEVVVEMVERGFVP 288
VGFE YE V++GC+E+RE+VL A+V M ERGF+P
Sbjct: 273 SVGFESYELVIEGCLEKREYVLAAKVATGMTERGFIP 309
>ref|XP_007214673.1| hypothetical protein PRUPE_ppa021626mg [Prunus persica]
gi|462410538|gb|EMJ15872.1| hypothetical protein
PRUPE_ppa021626mg [Prunus persica]
Length = 343
Score = 74.7 bits (182), Expect = 1e-11
Identities = 42/97 (43%), Positives = 53/97 (54%), Gaps = 1/97 (1%)
Frame = +1
Query: 1 GAMCGSRRTHEAERLLMEMVG-FGLTPRQGTVTKVLXXXXXXXXXXXXXXXXXXXXXGGI 177
GAMC RRT EA ++ +MV GLTPRQGT+ KV G
Sbjct: 214 GAMCTVRRTAEAIDMIKQMVEKVGLTPRQGTIAKVAAALRANRNIWRAVEMIEFLERDGY 273
Query: 178 RVGFEGYEEVVKGCVERREFVLGAEVVVEMVERGFVP 288
VGFE YE VV GC++ E++L +VV+ M ERGF+P
Sbjct: 274 PVGFESYELVVNGCLDCGEYILAGKVVMGMTERGFIP 310
>ref|XP_006469053.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g06270-like [Citrus sinensis]
Length = 343
Score = 73.2 bits (178), Expect = 4e-11
Identities = 39/97 (40%), Positives = 54/97 (55%), Gaps = 1/97 (1%)
Frame = +1
Query: 1 GAMCGSRRTHEAERLLMEMV-GFGLTPRQGTVTKVLXXXXXXXXXXXXXXXXXXXXXGGI 177
GAM +R+T++A ++ EMV GL PRQG V KV G
Sbjct: 214 GAMSTARKTNDAVEMMKEMVLNMGLMPRQGMVIKVAAALRANREMWKAVEMIEFLERKGC 273
Query: 178 RVGFEGYEEVVKGCVERREFVLGAEVVVEMVERGFVP 288
+GF+GYE VV+GC+E RE++L + V+ M ERGF+P
Sbjct: 274 PIGFQGYEVVVEGCLECREYILAGKTVMGMTERGFIP 310
>ref|XP_007149786.1| hypothetical protein PHAVU_005G098700g [Phaseolus vulgaris]
gi|593698644|ref|XP_007149787.1| hypothetical protein
PHAVU_005G098700g [Phaseolus vulgaris]
gi|561023050|gb|ESW21780.1| hypothetical protein
PHAVU_005G098700g [Phaseolus vulgaris]
gi|561023051|gb|ESW21781.1| hypothetical protein
PHAVU_005G098700g [Phaseolus vulgaris]
Length = 329
Score = 73.2 bits (178), Expect = 4e-11
Identities = 41/97 (42%), Positives = 55/97 (56%), Gaps = 1/97 (1%)
Frame = +1
Query: 1 GAMCGSRRTHEAERLLMEMV-GFGLTPRQGTVTKVLXXXXXXXXXXXXXXXXXXXXXGGI 177
GAM R+T EA+ L+ +MV +GLTP QGT+ K+L G
Sbjct: 200 GAMSRVRKTAEAQDLMKQMVVQYGLTPGQGTLVKLLAALRANREIWNAVEMIEFLEKEGN 259
Query: 178 RVGFEGYEEVVKGCVERREFVLGAEVVVEMVERGFVP 288
VGFE YE V++GC+E+ E+VL A+V M ERGF+P
Sbjct: 260 SVGFESYELVIEGCLEKCEYVLAAKVATGMAERGFIP 296
>ref|XP_006446741.1| hypothetical protein CICLE_v10017507mg [Citrus clementina]
gi|557549352|gb|ESR59981.1| hypothetical protein
CICLE_v10017507mg [Citrus clementina]
Length = 343
Score = 73.2 bits (178), Expect = 4e-11
Identities = 39/97 (40%), Positives = 54/97 (55%), Gaps = 1/97 (1%)
Frame = +1
Query: 1 GAMCGSRRTHEAERLLMEMV-GFGLTPRQGTVTKVLXXXXXXXXXXXXXXXXXXXXXGGI 177
GAM +R+T++A ++ EMV GL PRQG V KV G
Sbjct: 214 GAMSTARKTNDAVEMMKEMVLNMGLMPRQGMVIKVAAALRANREMWKAVEMIKFLERKGC 273
Query: 178 RVGFEGYEEVVKGCVERREFVLGAEVVVEMVERGFVP 288
+GF+GYE VV+GC+E RE++L + V+ M ERGF+P
Sbjct: 274 PIGFQGYEVVVEGCLECREYILAGKTVMGMTERGFIP 310
>ref|XP_007019848.1| Pentatricopeptide repeat-containing protein [Theobroma cacao]
gi|508725176|gb|EOY17073.1| Pentatricopeptide
repeat-containing protein [Theobroma cacao]
Length = 343
Score = 72.0 bits (175), Expect = 8e-11
Identities = 42/96 (43%), Positives = 53/96 (55%), Gaps = 1/96 (1%)
Frame = +1
Query: 4 AMCGSRRTHEAERLLMEMVGFG-LTPRQGTVTKVLXXXXXXXXXXXXXXXXXXXXXGGIR 180
AMC R+T +A L+ +MV LTPRQGTV KVL G
Sbjct: 215 AMCTFRKTVDAVELMKQMVQKARLTPRQGTVVKVLATLRANREIWKAIEMIEFLEREGNP 274
Query: 181 VGFEGYEEVVKGCVERREFVLGAEVVVEMVERGFVP 288
VGFE YE VV+GC+E E++L +VV+ M ERGF+P
Sbjct: 275 VGFESYELVVEGCLECCEYILAGKVVIAMTERGFIP 310
>ref|XP_002278909.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06270
[Vitis vinifera] gi|302143379|emb|CBI21940.3| unnamed
protein product [Vitis vinifera]
Length = 343
Score = 70.5 bits (171), Expect = 2e-10
Identities = 39/97 (40%), Positives = 49/97 (50%), Gaps = 1/97 (1%)
Frame = +1
Query: 1 GAMCGSRRTHEAERLLMEMVG-FGLTPRQGTVTKVLXXXXXXXXXXXXXXXXXXXXXGGI 177
GAMC RRT +A L+ EMV GLTPRQGTV ++
Sbjct: 214 GAMCAMRRTTDATELMKEMVAKIGLTPRQGTVLNLVAALRAKKEIWKAVEMIEFLEGEDF 273
Query: 178 RVGFEGYEEVVKGCVERREFVLGAEVVVEMVERGFVP 288
GF YE V++GC+ EFVL +VV+ M RGF+P
Sbjct: 274 NAGFASYESVLEGCLACHEFVLAGKVVMGMTARGFIP 310
>ref|XP_006376410.1| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|550325686|gb|ERP54207.1|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 341
Score = 69.3 bits (168), Expect = 5e-10
Identities = 40/97 (41%), Positives = 52/97 (53%), Gaps = 1/97 (1%)
Frame = +1
Query: 1 GAMCGSRRTHEAERLLMEMV-GFGLTPRQGTVTKVLXXXXXXXXXXXXXXXXXXXXXGGI 177
GAMC R+ +A ++ EMV L PRQG V KVL G
Sbjct: 212 GAMCRVRKCDDAIEMMKEMVVRMRLCPRQGVVVKVLAALRANREMRKAGEMIEFLEKEGY 271
Query: 178 RVGFEGYEEVVKGCVERREFVLGAEVVVEMVERGFVP 288
VGFE YE VV+GC+E ++F L A+VV+ M E+GF+P
Sbjct: 272 GVGFESYELVVEGCLECKDFFLAAKVVMGMTEKGFIP 308
>ref|XP_004307287.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g06270-like [Fragaria vesca subsp. vesca]
Length = 341
Score = 68.2 bits (165), Expect = 1e-09
Identities = 39/97 (40%), Positives = 52/97 (53%), Gaps = 1/97 (1%)
Frame = +1
Query: 1 GAMCGSRRTHEAERLLMEMVG-FGLTPRQGTVTKVLXXXXXXXXXXXXXXXXXXXXXGGI 177
GAMC R+T EA ++ +MV GLTPRQGT+ KV
Sbjct: 212 GAMCTVRKTSEALDMIQKMVEKVGLTPRQGTIVKVASALRANKEIWRAVELIEFLERKDY 271
Query: 178 RVGFEGYEEVVKGCVERREFVLGAEVVVEMVERGFVP 288
VGFE Y+ VVKGC++ E +L ++V+ M E+GFVP
Sbjct: 272 PVGFESYDLVVKGCLDSGENILAGKLVMGMTEKGFVP 308
>ref|XP_002525148.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223535607|gb|EEF37275.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 354
Score = 65.5 bits (158), Expect = 7e-09
Identities = 35/97 (36%), Positives = 55/97 (56%), Gaps = 1/97 (1%)
Frame = +1
Query: 1 GAMCGSRRTHEAERLLMEMV-GFGLTPRQGTVTKVLXXXXXXXXXXXXXXXXXXXXXGGI 177
G+M +R+T +A ++ EMV GL PRQGT+ K+ G
Sbjct: 225 GSMSKARKTVDAVEIMKEMVVKVGLNPRQGTMMKLAAALRANREILIAVELIEFLEREGC 284
Query: 178 RVGFEGYEEVVKGCVERREFVLGAEVVVEMVERGFVP 288
VGF Y+ V++GC+ER+E++L A+VV+ M ++GF+P
Sbjct: 285 VVGFGCYQLVLEGCLERKEYILAAKVVMRMTDKGFIP 321
>ref|XP_006354630.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g06270-like [Solanum tuberosum]
Length = 333
Score = 63.9 bits (154), Expect = 2e-08
Identities = 33/91 (36%), Positives = 49/91 (53%), Gaps = 1/91 (1%)
Frame = +1
Query: 19 RRTHEAERLLMEMVG-FGLTPRQGTVTKVLXXXXXXXXXXXXXXXXXXXXXGGIRVGFEG 195
R T + L EMV FGL+PR+ T+ K L G+ +GFE
Sbjct: 210 RMTSAIIKTLNEMVAIFGLSPRKETLVKALAAILANKEIRRAIEVIEFLTNEGVHIGFEC 269
Query: 196 YEEVVKGCVERREFVLGAEVVVEMVERGFVP 288
Y+ V++GC+E R+F+L + V+EM +RGF+P
Sbjct: 270 YQSVLEGCLESRQFILAGKFVIEMTKRGFIP 300
>ref|XP_006354624.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g06270-like [Solanum tuberosum]
Length = 333
Score = 63.9 bits (154), Expect = 2e-08
Identities = 33/91 (36%), Positives = 49/91 (53%), Gaps = 1/91 (1%)
Frame = +1
Query: 19 RRTHEAERLLMEMVG-FGLTPRQGTVTKVLXXXXXXXXXXXXXXXXXXXXXGGIRVGFEG 195
R T + L EMV FGL+PR+ T+ K L G+ +GFE
Sbjct: 210 RMTSAIIKTLNEMVAIFGLSPRKETLVKALAAILANKEIRRAIEVIEFLTNEGVHIGFEC 269
Query: 196 YEEVVKGCVERREFVLGAEVVVEMVERGFVP 288
Y+ V++GC+E R+F+L + V+EM +RGF+P
Sbjct: 270 YQSVLEGCLESRQFILAGKFVIEMTKRGFIP 300
>gb|EXB79007.1| hypothetical protein L484_001451 [Morus notabilis]
Length = 344
Score = 63.5 bits (153), Expect = 3e-08
Identities = 38/95 (40%), Positives = 50/95 (52%), Gaps = 1/95 (1%)
Frame = +1
Query: 7 MCGSRRTHEAERLLMEMVG-FGLTPRQGTVTKVLXXXXXXXXXXXXXXXXXXXXXGGIRV 183
MC RRT EA +L +M GLTPRQGT+ K+ G V
Sbjct: 217 MCKFRRTAEALDMLQQMTKKVGLTPRQGTIVKLAAALLANREIWRAVEMIELLVKEGHVV 276
Query: 184 GFEGYEEVVKGCVERREFVLGAEVVVEMVERGFVP 288
GFE YE VV+G +E E++L +VV+ M E+GF+P
Sbjct: 277 GFESYELVVEGSLECGEYILAGKVVMGMTEKGFLP 311
>ref|XP_006305261.1| hypothetical protein CARUB_v10009635mg [Capsella rubella]
gi|482573972|gb|EOA38159.1| hypothetical protein
CARUB_v10009635mg [Capsella rubella]
Length = 343
Score = 63.2 bits (152), Expect = 4e-08
Identities = 33/96 (34%), Positives = 53/96 (55%), Gaps = 1/96 (1%)
Frame = +1
Query: 4 AMCGSRRTHEAERLLMEMVGFG-LTPRQGTVTKVLXXXXXXXXXXXXXXXXXXXXXGGIR 180
++C +R+T++ ++ EMV ++PR+G +TKV G
Sbjct: 215 SLCLARKTNDVVNIVKEMVSKARISPRKGMLTKVASALRANRETWKAIEMIEFVESRGYP 274
Query: 181 VGFEGYEEVVKGCVERREFVLGAEVVVEMVERGFVP 288
V FE YE VV+GC+E RE++L ++VV M +RGF+P
Sbjct: 275 VEFESYEVVVEGCLEIREYILAGKMVVRMTDRGFIP 310
>ref|NP_563765.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75264068|sp|Q9LNC0.1|PPR16_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At1g06270 gi|8844132|gb|AAF80224.1|AC025290_13 Contains
similarity to an unknown protein F23N19.4 gi|6630464
from Arabidopsis thaliana gb|AC007190 and contains
multiple PPR PF|01535 repeats. EST gb|T44174 comes from
this gene [Arabidopsis thaliana]
gi|17529194|gb|AAL38823.1| unknown protein [Arabidopsis
thaliana] gi|20465473|gb|AAM20196.1| unknown protein
[Arabidopsis thaliana] gi|21536601|gb|AAM60933.1|
unknown [Arabidopsis thaliana]
gi|332189849|gb|AEE27970.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 343
Score = 62.8 bits (151), Expect = 5e-08
Identities = 33/96 (34%), Positives = 53/96 (55%), Gaps = 1/96 (1%)
Frame = +1
Query: 4 AMCGSRRTHEAERLLMEMVG-FGLTPRQGTVTKVLXXXXXXXXXXXXXXXXXXXXXGGIR 180
++C +R+T + +++ EMV G++PR+G +TKV
Sbjct: 215 SLCLARKTTDVVKIVKEMVSKAGISPRKGMLTKVAAALRANREIWKAIEMIEFVESRDYP 274
Query: 181 VGFEGYEEVVKGCVERREFVLGAEVVVEMVERGFVP 288
V FE YE VV+GC+E RE++L +VV+ M +RGF+P
Sbjct: 275 VEFESYEVVVEGCLEVREYILAGKVVMRMTDRGFIP 310
>ref|XP_002892331.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297338173|gb|EFH68590.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 343
Score = 62.8 bits (151), Expect = 5e-08
Identities = 32/96 (33%), Positives = 54/96 (56%), Gaps = 1/96 (1%)
Frame = +1
Query: 4 AMCGSRRTHEAERLLMEMVG-FGLTPRQGTVTKVLXXXXXXXXXXXXXXXXXXXXXGGIR 180
++C +R+T++ +++ EMV G++PR+G +TKV
Sbjct: 215 SLCLARKTNDVVKIVKEMVSKAGISPRKGMLTKVAAALRANREIWKAIEMIEFVESRDYP 274
Query: 181 VGFEGYEEVVKGCVERREFVLGAEVVVEMVERGFVP 288
V FE YE VV+GC+E RE++L ++V+ M +RGF+P
Sbjct: 275 VEFESYEVVVEGCLEVREYILAGKMVMRMTDRGFIP 310
>ref|XP_004139374.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g06270-like [Cucumis sativus]
gi|449483078|ref|XP_004156487.1| PREDICTED:
pentatricopeptide repeat-containing protein
At1g06270-like [Cucumis sativus]
Length = 343
Score = 62.4 bits (150), Expect = 6e-08
Identities = 36/91 (39%), Positives = 48/91 (52%), Gaps = 1/91 (1%)
Frame = +1
Query: 19 RRTHEAERLLMEMV-GFGLTPRQGTVTKVLXXXXXXXXXXXXXXXXXXXXXGGIRVGFEG 195
RRT +A LL EMV L PRQGT+T V+ VGFE
Sbjct: 220 RRTDKAVELLKEMVVKVKLMPRQGTITNVVAALRTNREVRRAVEIIELLERDSHDVGFES 279
Query: 196 YEEVVKGCVERREFVLGAEVVVEMVERGFVP 288
YE +V+GC+E RE++L +V + M +RGF+P
Sbjct: 280 YELLVEGCLECREYILAGKVTMGMTDRGFIP 310
>ref|XP_004229701.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g06270-like [Solanum lycopersicum]
Length = 333
Score = 61.2 bits (147), Expect = 1e-07
Identities = 33/91 (36%), Positives = 49/91 (53%), Gaps = 1/91 (1%)
Frame = +1
Query: 19 RRTHEAERLLMEMVG-FGLTPRQGTVTKVLXXXXXXXXXXXXXXXXXXXXXGGIRVGFEG 195
R T + L EMV FGL+PR+ T+ K L G+ VGFE
Sbjct: 210 RLTSAIIKTLNEMVAIFGLSPRKETLVKALAAIRANKEIRRAIEVIEFLTNEGVHVGFEC 269
Query: 196 YEEVVKGCVERREFVLGAEVVVEMVERGFVP 288
++ V++GC+E R+F+L + V+EM +RGF+P
Sbjct: 270 HQSVLEGCLESRQFLLAGKFVIEMTKRGFIP 300
>ref|XP_006417939.1| hypothetical protein EUTSA_v10008110mg [Eutrema salsugineum]
gi|557095710|gb|ESQ36292.1| hypothetical protein
EUTSA_v10008110mg [Eutrema salsugineum]
Length = 343
Score = 60.8 bits (146), Expect = 2e-07
Identities = 32/96 (33%), Positives = 52/96 (54%), Gaps = 1/96 (1%)
Frame = +1
Query: 4 AMCGSRRTHEAERLLMEMVG-FGLTPRQGTVTKVLXXXXXXXXXXXXXXXXXXXXXGGIR 180
+MC +R+T + + + EMV G++PR+G +TKV
Sbjct: 215 SMCLARKTSDVVKTVKEMVSKAGISPRKGMLTKVAAALRANREIWKAIEMIEFVESRDYP 274
Query: 181 VGFEGYEEVVKGCVERREFVLGAEVVVEMVERGFVP 288
V FE YE +V+GC+E RE++L ++V+ M +RGF+P
Sbjct: 275 VEFESYEVLVEGCLEVREYILAGKMVMRMTDRGFIP 310