BLASTX nr result
ID: Sinomenium22_contig00045762
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium22_contig00045762
(370 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006358268.1| PREDICTED: pentatricopeptide repeat-containi... 126 3e-27
ref|XP_002268526.2| PREDICTED: pentatricopeptide repeat-containi... 125 8e-27
ref|XP_004235420.1| PREDICTED: pentatricopeptide repeat-containi... 122 5e-26
ref|XP_002518060.1| pentatricopeptide repeat-containing protein,... 107 2e-21
ref|XP_006490098.1| PREDICTED: pentatricopeptide repeat-containi... 99 8e-19
ref|XP_006421694.1| hypothetical protein CICLE_v10004237mg [Citr... 99 8e-19
ref|XP_004160885.1| PREDICTED: pentatricopeptide repeat-containi... 97 3e-18
ref|XP_004148164.1| PREDICTED: pentatricopeptide repeat-containi... 97 3e-18
ref|XP_006858679.1| hypothetical protein AMTR_s00066p00082400 [A... 96 7e-18
ref|XP_006858678.1| hypothetical protein AMTR_s00066p00081840 [A... 96 7e-18
ref|XP_007038409.1| Tetratricopeptide repeat-like superfamily pr... 95 9e-18
gb|AFW81312.1| hypothetical protein ZEAMMB73_082399 [Zea mays] 87 3e-15
ref|XP_006384788.1| hypothetical protein POPTR_0004s21110g [Popu... 85 9e-15
gb|AFW81308.1| hypothetical protein ZEAMMB73_549819 [Zea mays] 85 9e-15
ref|XP_004979592.1| PREDICTED: protein Rf1, mitochondrial-like [... 84 2e-14
ref|XP_004979582.1| PREDICTED: protein Rf1, mitochondrial-like i... 84 3e-14
ref|XP_006828862.1| hypothetical protein AMTR_s00001p00165480 [A... 82 8e-14
ref|XP_002312829.1| pentatricopeptide repeat-containing family p... 82 8e-14
ref|XP_004979523.1| PREDICTED: protein Rf1, mitochondrial-like [... 80 2e-13
ref|XP_006423135.1| hypothetical protein CICLE_v10030406mg [Citr... 80 3e-13
>ref|XP_006358268.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g62370-like [Solanum tuberosum]
Length = 1067
Score = 126 bits (317), Expect = 3e-27
Identities = 62/117 (52%), Positives = 77/117 (65%)
Frame = +2
Query: 20 IVPVPSVLQSMIICYCRLGKLDKAKNFADELFGIGCYPCKTACNVLIRSLCMEDRILEAF 199
I P SVL SM ICYC LGKL++AK D+L PC + CN LI+ C +DRIL+ F
Sbjct: 128 IEPNHSVLNSMAICYCNLGKLEEAKLLFDKLVDKKLLPCSSTCNELIKGFCGQDRILDGF 187
Query: 200 DLFDRMICTGAFPSFWCYNILIDGLCFLGNLDESLYVFDEMIKSGTRPTSHLYKSLV 370
D+F I + +F CYN L+DGLCF G LDE+LYVFDEM G PT HL+K+L+
Sbjct: 188 DVFVEAINSEVLLAFSCYNKLVDGLCFRGYLDEALYVFDEMCDRGVPPTVHLFKTLI 244
Score = 57.0 bits (136), Expect = 3e-06
Identities = 33/115 (28%), Positives = 56/115 (48%)
Frame = +2
Query: 26 PVPSVLQSMIICYCRLGKLDKAKNFADELFGIGCYPCKTACNVLIRSLCMEDRILEAFDL 205
P ++ S+I C R ++D+A + G YP K +I +L + ++A +L
Sbjct: 585 PSVAIYDSVIGCLGREKRIDEALGVFRRMLEAGIYPDKILFVTMINALSRNGQAIQAHEL 644
Query: 206 FDRMICTGAFPSFWCYNILIDGLCFLGNLDESLYVFDEMIKSGTRPTSHLYKSLV 370
F M+ G PS + Y LI+GL +++ +MI+ G P + LY SL+
Sbjct: 645 FITMLEDGVQPSHYAYTALINGLVKKNMIEKGCVYLKQMIEEGFMPNTVLYTSLI 699
>ref|XP_002268526.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g62370-like [Vitis vinifera]
Length = 1101
Score = 125 bits (313), Expect = 8e-27
Identities = 58/117 (49%), Positives = 77/117 (65%), Gaps = 1/117 (0%)
Frame = +2
Query: 20 IVPVPSVLQSMIICYCRLGKLDKAKNFADELFGIGCYPCKTACNVLIRSLCMEDRILEAF 199
I+P L SM+ICYC LGKL++A D LF + +PCK ACN ++R LC +R+LEAF
Sbjct: 124 IIPDSETLNSMVICYCNLGKLEEAMAHFDRLFEVDSFPCKPACNAMLRELCARERVLEAF 183
Query: 200 DLFDRMICTGAFPSFWCYNILIDGLCFLGNLDESLYVFDEM-IKSGTRPTSHLYKSL 367
D F R+ G WC+N LIDGLC G++DE+ Y+FD M ++G T HLYK+L
Sbjct: 184 DYFVRINDVGILMGLWCFNRLIDGLCDKGHVDEAFYMFDTMRERTGLPATIHLYKTL 240
>ref|XP_004235420.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g62370-like [Solanum lycopersicum]
Length = 1081
Score = 122 bits (306), Expect = 5e-26
Identities = 60/117 (51%), Positives = 76/117 (64%)
Frame = +2
Query: 20 IVPVPSVLQSMIICYCRLGKLDKAKNFADELFGIGCYPCKTACNVLIRSLCMEDRILEAF 199
I P S+L SM ICYC LGKL++AK D+L + PC + CN LI+ C +DRIL+ F
Sbjct: 128 IEPNHSLLNSMAICYCNLGKLEEAKLLFDKLVDMKLMPCSSTCNELIKGFCGQDRILDGF 187
Query: 200 DLFDRMICTGAFPSFWCYNILIDGLCFLGNLDESLYVFDEMIKSGTRPTSHLYKSLV 370
D+F I + +F CYN L+D LCF G LDE+LYVFDEM G PT HL+K L+
Sbjct: 188 DVFVEAINSEVLLAFSCYNKLVDILCFQGYLDEALYVFDEMCDRGVPPTVHLFKRLI 244
Score = 58.9 bits (141), Expect = 7e-07
Identities = 35/115 (30%), Positives = 56/115 (48%)
Frame = +2
Query: 26 PVPSVLQSMIICYCRLGKLDKAKNFADELFGIGCYPCKTACNVLIRSLCMEDRILEAFDL 205
P ++ S+I C R ++D+A + G YP KT +I +L R ++A +L
Sbjct: 585 PSVAIYDSVIGCLGRKKRIDEALGVFRRMLETGIYPDKTLFVTMINALSRNGRAIQAHEL 644
Query: 206 FDRMICTGAFPSFWCYNILIDGLCFLGNLDESLYVFDEMIKSGTRPTSHLYKSLV 370
F M+ G PS Y LI+GL +++ +MI+ G P + LY SL+
Sbjct: 645 FVTMLEDGVQPSHNAYTALINGLVKKNMIEKGCVYLKQMIEEGFMPNTVLYTSLI 699
>ref|XP_002518060.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223542656|gb|EEF44193.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 402
Score = 107 bits (266), Expect = 2e-21
Identities = 55/117 (47%), Positives = 74/117 (63%), Gaps = 1/117 (0%)
Frame = +2
Query: 20 IVPVPSVLQSMIICYCRLGKLDKAKNFADELFGIGCYPCKTACNVLIRSLCMEDRILEAF 199
I P S+ SMIIC+ +LGKL++A+ D+L G GC PC ACNV++R LC ++ LEAF
Sbjct: 125 IQPNASITNSMIICFVKLGKLEEARLLFDKLIGNGCVPCNAACNVILRELCGQEMFLEAF 184
Query: 200 DLFDRMICTGAFPSFWCYNILIDGLCFLGNLDESLYVFDEMIK-SGTRPTSHLYKSL 367
D F R+ W YN+LIDGLC G + +++ VF+ M K + PT H YKSL
Sbjct: 185 DCFVRIRDAKMQLGMWFYNVLIDGLCSKGCVGDAMEVFNLMPKRTSFLPTLHNYKSL 241
>ref|XP_006490098.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g62370-like isoform X1 [Citrus sinensis]
gi|568873973|ref|XP_006490099.1| PREDICTED:
pentatricopeptide repeat-containing protein
At5g62370-like isoform X2 [Citrus sinensis]
gi|568873975|ref|XP_006490100.1| PREDICTED:
pentatricopeptide repeat-containing protein
At5g62370-like isoform X3 [Citrus sinensis]
Length = 1004
Score = 98.6 bits (244), Expect = 8e-19
Identities = 55/122 (45%), Positives = 71/122 (58%), Gaps = 1/122 (0%)
Frame = +2
Query: 5 FVRLRIVPVPSVLQSMIICYCRLGKLDKAKNFADELFGIGCYPCKTACNVLIRSLCMEDR 184
FV L I P P++L S+II YC+LG ++ A D L P K AC ++R L E++
Sbjct: 126 FVALGIDPDPAILNSVIIGYCKLGNIEDALRHFDRLISKNIVPIKLACVSILRGLFAEEK 185
Query: 185 ILEAFDLFDRMICTGAFPSFWCYNILIDGLCFLGNLDESLYVFDEM-IKSGTRPTSHLYK 361
LEAFD F ++ G + W YN+LIDGLC+ G LDE L V + M K G P H YK
Sbjct: 186 FLEAFDYFIKICNAGVDLNCWSYNVLIDGLCYKGFLDEVLEVVNIMRKKKGLVPALHPYK 245
Query: 362 SL 367
SL
Sbjct: 246 SL 247
Score = 55.5 bits (132), Expect = 8e-06
Identities = 32/102 (31%), Positives = 53/102 (51%)
Frame = +2
Query: 65 CRLGKLDKAKNFADELFGIGCYPCKTACNVLIRSLCMEDRILEAFDLFDRMICTGAFPSF 244
C+ G LD A + D++ G P + +I LC E RILEA D+F RM+ G P
Sbjct: 567 CKWGNLDSALDILDQMEVRGPKPSVAIYDAIIGHLCKEKRILEAEDMFKRMLKAGIDPDE 626
Query: 245 WCYNILIDGLCFLGNLDESLYVFDEMIKSGTRPTSHLYKSLV 370
+ +I+G E+ +F++M ++ +P S+ Y +L+
Sbjct: 627 VFFTTMINGYLQNRKPIEACQLFEKMKENSVQPGSYPYTALI 668
>ref|XP_006421694.1| hypothetical protein CICLE_v10004237mg [Citrus clementina]
gi|557523567|gb|ESR34934.1| hypothetical protein
CICLE_v10004237mg [Citrus clementina]
Length = 1004
Score = 98.6 bits (244), Expect = 8e-19
Identities = 55/122 (45%), Positives = 71/122 (58%), Gaps = 1/122 (0%)
Frame = +2
Query: 5 FVRLRIVPVPSVLQSMIICYCRLGKLDKAKNFADELFGIGCYPCKTACNVLIRSLCMEDR 184
FV L I P P++L S+II YC+LG ++ A D L P K AC ++R L E++
Sbjct: 126 FVALGIDPDPAILNSVIIGYCKLGNIEDALRHFDRLISKNIVPIKLACVSILRGLFAEEK 185
Query: 185 ILEAFDLFDRMICTGAFPSFWCYNILIDGLCFLGNLDESLYVFDEM-IKSGTRPTSHLYK 361
LEAFD F ++ G + W YN+LIDGLC+ G LDE L V + M K G P H YK
Sbjct: 186 FLEAFDYFIKICNAGVDLNCWSYNVLIDGLCYKGFLDEVLEVVNIMRKKKGLVPALHPYK 245
Query: 362 SL 367
SL
Sbjct: 246 SL 247
Score = 55.5 bits (132), Expect = 8e-06
Identities = 32/102 (31%), Positives = 53/102 (51%)
Frame = +2
Query: 65 CRLGKLDKAKNFADELFGIGCYPCKTACNVLIRSLCMEDRILEAFDLFDRMICTGAFPSF 244
C+ G LD A + D++ G P + +I LC E RILEA D+F RM+ G P
Sbjct: 567 CKWGNLDSALDILDQMEVRGPKPSVAIYDAIIGHLCKEKRILEAEDMFKRMLKAGIDPDE 626
Query: 245 WCYNILIDGLCFLGNLDESLYVFDEMIKSGTRPTSHLYKSLV 370
+ +I+G E+ +F++M ++ +P S+ Y +L+
Sbjct: 627 VFFTTMINGYLQNRKPIEACQLFEKMKENSVQPGSYPYTALI 668
>ref|XP_004160885.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g62370-like [Cucumis sativus]
Length = 693
Score = 96.7 bits (239), Expect = 3e-18
Identities = 46/111 (41%), Positives = 70/111 (63%), Gaps = 1/111 (0%)
Frame = +2
Query: 38 VLQSMIICYCRLGKLDKAKNFADELFGIGCYPCKTACNVLIRSLCMEDRILEAFDLFDRM 217
+L SM+ C+CRLGK ++A + + L + P K + N + R LC + R+LEAF+ F R+
Sbjct: 118 LLDSMVSCFCRLGKFEEALSHFNRLLSLNYVPSKVSFNAIFRELCAQGRVLEAFNYFVRV 177
Query: 218 ICTGAFPSFWCYNILIDGLCFLGNLDESLYVFDEM-IKSGTRPTSHLYKSL 367
G + WC+N+L+DGLC G + E+L +FD M +G PT HL+K+L
Sbjct: 178 NGAGIYLGCWCFNVLMDGLCNQGFMGEALELFDIMQSTNGYPPTLHLFKTL 228
>ref|XP_004148164.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g62370-like [Cucumis sativus]
Length = 693
Score = 96.7 bits (239), Expect = 3e-18
Identities = 46/111 (41%), Positives = 70/111 (63%), Gaps = 1/111 (0%)
Frame = +2
Query: 38 VLQSMIICYCRLGKLDKAKNFADELFGIGCYPCKTACNVLIRSLCMEDRILEAFDLFDRM 217
+L SM+ C+CRLGK ++A + + L + P K + N + R LC + R+LEAF+ F R+
Sbjct: 118 LLDSMVSCFCRLGKFEEALSHFNRLLSLNYVPSKVSFNAIFRELCAQGRVLEAFNYFVRV 177
Query: 218 ICTGAFPSFWCYNILIDGLCFLGNLDESLYVFDEM-IKSGTRPTSHLYKSL 367
G + WC+N+L+DGLC G + E+L +FD M +G PT HL+K+L
Sbjct: 178 NGAGIYLGCWCFNVLMDGLCNQGFMGEALELFDIMQSTNGYPPTLHLFKTL 228
>ref|XP_006858679.1| hypothetical protein AMTR_s00066p00082400 [Amborella trichopoda]
gi|548862790|gb|ERN20146.1| hypothetical protein
AMTR_s00066p00082400 [Amborella trichopoda]
Length = 992
Score = 95.5 bits (236), Expect = 7e-18
Identities = 49/117 (41%), Positives = 69/117 (58%)
Frame = +2
Query: 20 IVPVPSVLQSMIICYCRLGKLDKAKNFADELFGIGCYPCKTACNVLIRSLCMEDRILEAF 199
IVP P ++ MIICY RLGKL KA + + L +G P A N I+ LC+++R+ EA
Sbjct: 111 IVPDPDMVNCMIICYSRLGKLQKAIDHLEALVQVGSLPSSPAINASIQELCIKERVPEAL 170
Query: 200 DLFDRMICTGAFPSFWCYNILIDGLCFLGNLDESLYVFDEMIKSGTRPTSHLYKSLV 370
LF + I PS +L+ LC GN D++L VF+ M+ SG +P+ YKSL+
Sbjct: 171 SLFYKAISFKVLPSSSSCRLLLFSLCSRGNFDKALQVFETMVGSGMKPSIQFYKSLM 227
Score = 65.9 bits (159), Expect = 6e-09
Identities = 42/121 (34%), Positives = 61/121 (50%)
Frame = +2
Query: 8 VRLRIVPVPSVLQSMIICYCRLGKLDKAKNFADELFGIGCYPCKTACNVLIRSLCMEDRI 187
+R IVP +I +C GK D A F +++ + P + N L++ L EDRI
Sbjct: 449 LRSNIVPSSVAFNVLINAFCAEGKSDSAFYFINKMGYLELEPTVSTYNSLVKCLFKEDRI 508
Query: 188 LEAFDLFDRMICTGAFPSFWCYNILIDGLCFLGNLDESLYVFDEMIKSGTRPTSHLYKSL 367
+A L M G P+ Y I+I G C NL +L F+EMI+SG PT +Y S+
Sbjct: 509 ADAEALVSSMRERGLVPNRATYLIMISGHCKERNLVLALRAFEEMIESGLEPTVAIYDSI 568
Query: 368 V 370
+
Sbjct: 569 I 569
Score = 63.5 bits (153), Expect = 3e-08
Identities = 33/108 (30%), Positives = 56/108 (51%)
Frame = +2
Query: 47 SMIICYCRLGKLDKAKNFADELFGIGCYPCKTACNVLIRSLCMEDRILEAFDLFDRMICT 226
++I + +LG LD A + +E+ G P +V+I C ++R+ A L D M
Sbjct: 295 TLIYGFVKLGHLDLAWEYFNEMHARGLEPDVVTYSVIINRYCKDNRLDSALKLLDVMSSH 354
Query: 227 GAFPSFWCYNILIDGLCFLGNLDESLYVFDEMIKSGTRPTSHLYKSLV 370
G P+ CY +LI LC E+ ++F++M+ SG P ++ SL+
Sbjct: 355 GVAPNVHCYTVLIQALCKENRFSEADFLFNKMLDSGLAPDHIMFLSLI 402
Score = 57.4 bits (137), Expect = 2e-06
Identities = 33/113 (29%), Positives = 54/113 (47%)
Frame = +2
Query: 32 PSVLQSMIICYCRLGKLDKAKNFADELFGIGCYPCKTACNVLIRSLCMEDRILEAFDLFD 211
PS L+ C + K++ A + ++ G P N +I C D + A+DL D
Sbjct: 751 PSRLEQRFSCNSFVEKIELALSLMRDMIDDGLMPDLHIYNGMINGFCRADMMGNAYDLLD 810
Query: 212 RMICTGAFPSFWCYNILIDGLCFLGNLDESLYVFDEMIKSGTRPTSHLYKSLV 370
M+ G P+ YNILI+G G +D ++ +F++M G P Y +L+
Sbjct: 811 LMLQNGVHPNQVTYNILINGHSMHGEIDLAIKLFNQMAMDGYPPDKVTYNALL 863
>ref|XP_006858678.1| hypothetical protein AMTR_s00066p00081840 [Amborella trichopoda]
gi|548862789|gb|ERN20145.1| hypothetical protein
AMTR_s00066p00081840 [Amborella trichopoda]
Length = 992
Score = 95.5 bits (236), Expect = 7e-18
Identities = 49/117 (41%), Positives = 69/117 (58%)
Frame = +2
Query: 20 IVPVPSVLQSMIICYCRLGKLDKAKNFADELFGIGCYPCKTACNVLIRSLCMEDRILEAF 199
IVP P ++ MIICY RLGKL KA + + L +G P A N I+ LC+++R+ EA
Sbjct: 111 IVPDPDMVNCMIICYSRLGKLQKAIDHLEALVQVGSLPSSPAINASIQELCIKERVPEAL 170
Query: 200 DLFDRMICTGAFPSFWCYNILIDGLCFLGNLDESLYVFDEMIKSGTRPTSHLYKSLV 370
LF R I PS +++ LC GN D++L VF+ M+ SG +P+ YKSL+
Sbjct: 171 SLFYRAISFKVLPSSSSCRLVLFSLCSRGNFDKALQVFETMVGSGMKPSIQFYKSLM 227
Score = 65.1 bits (157), Expect = 1e-08
Identities = 41/121 (33%), Positives = 61/121 (50%)
Frame = +2
Query: 8 VRLRIVPVPSVLQSMIICYCRLGKLDKAKNFADELFGIGCYPCKTACNVLIRSLCMEDRI 187
+R IVP +I +C GK D A F +++ + P + N L++ L EDRI
Sbjct: 449 LRSNIVPSSVAFNVLINAFCAEGKSDSAFYFINKMGYLELEPTVSTYNSLVKCLFKEDRI 508
Query: 188 LEAFDLFDRMICTGAFPSFWCYNILIDGLCFLGNLDESLYVFDEMIKSGTRPTSHLYKSL 367
+A L M G P+ Y I+I G C NL +L F+EM++SG PT +Y S+
Sbjct: 509 ADAEALVSSMRERGLVPNRATYLIMISGHCKERNLVLALRAFEEMLESGLEPTVAIYDSI 568
Query: 368 V 370
+
Sbjct: 569 I 569
Score = 58.5 bits (140), Expect = 9e-07
Identities = 33/113 (29%), Positives = 54/113 (47%)
Frame = +2
Query: 32 PSVLQSMIICYCRLGKLDKAKNFADELFGIGCYPCKTACNVLIRSLCMEDRILEAFDLFD 211
PS L+ +C K++ A N ++ G P N +I C D + +A+DL D
Sbjct: 751 PSRLEQRFLCNSSEEKIELALNLMRDMIDDGLMPDLHIYNGMINGFCRADMMGDAYDLLD 810
Query: 212 RMICTGAFPSFWCYNILIDGLCFLGNLDESLYVFDEMIKSGTRPTSHLYKSLV 370
M+ G P+ Y ILI+G G +D ++ +F++M G P Y +L+
Sbjct: 811 LMLQNGVHPNQVTYTILINGHSMHGEIDLAIKLFNQMAMDGYPPDKVTYNALL 863
>ref|XP_007038409.1| Tetratricopeptide repeat-like superfamily protein, putative isoform
1 [Theobroma cacao] gi|590671720|ref|XP_007038410.1|
Tetratricopeptide repeat-like superfamily protein,
putative isoform 1 [Theobroma cacao]
gi|590671723|ref|XP_007038411.1| Tetratricopeptide
repeat-like superfamily protein, putative isoform 1
[Theobroma cacao] gi|508775654|gb|EOY22910.1|
Tetratricopeptide repeat-like superfamily protein,
putative isoform 1 [Theobroma cacao]
gi|508775655|gb|EOY22911.1| Tetratricopeptide
repeat-like superfamily protein, putative isoform 1
[Theobroma cacao] gi|508775656|gb|EOY22912.1|
Tetratricopeptide repeat-like superfamily protein,
putative isoform 1 [Theobroma cacao]
Length = 1003
Score = 95.1 bits (235), Expect = 9e-18
Identities = 54/121 (44%), Positives = 72/121 (59%), Gaps = 1/121 (0%)
Frame = +2
Query: 8 VRLRIVPVPSVLQSMIICYCRLGKLDKAKNFADELFGIGCYPCKTACNVLIRSLCMEDRI 187
+R I P P ++ SM+IC C+LGKL++A D L + K A N L+R L ++R
Sbjct: 121 IRRGINPDPFIVNSMVICLCKLGKLEEASTLFDRLL-MNNSSEKPAFNALVRELFAQERF 179
Query: 188 LEAFDLFDRMICTGAFPSFWCYNILIDGLCFLGNLDESLYVFDEMIK-SGTRPTSHLYKS 364
L+ FD F M G W YN LIDGLC GNL+E++ +FD M + +G PT HLYKS
Sbjct: 180 LDVFDYFVAMSDIGVNLGCWYYNGLIDGLCQKGNLEEAIQMFDLMRETAGLSPTLHLYKS 239
Query: 365 L 367
L
Sbjct: 240 L 240
Score = 67.0 bits (162), Expect = 3e-09
Identities = 39/117 (33%), Positives = 62/117 (52%)
Frame = +2
Query: 20 IVPVPSVLQSMIICYCRLGKLDKAKNFADELFGIGCYPCKTACNVLIRSLCMEDRILEAF 199
I P + M+ +C+ G L A + D++ G P + +I SLC + R+ EA
Sbjct: 541 IFPDQATYLIMVNEHCKHGDLASAFDILDQMEDRGMKPGVAIYDCIIGSLCRQKRLFEAE 600
Query: 200 DLFDRMICTGAFPSFWCYNILIDGLCFLGNLDESLYVFDEMIKSGTRPTSHLYKSLV 370
D+F RM+ +G P Y +I+G G L E+ +F++MI+ RPTSH Y +L+
Sbjct: 601 DMFIRMLESGEDPDEIVYMTMINGYAKNGRLIEARQLFEKMIEDAIRPTSHSYTALI 657
Score = 55.5 bits (132), Expect = 8e-06
Identities = 31/98 (31%), Positives = 48/98 (48%)
Frame = +2
Query: 77 KLDKAKNFADELFGIGCYPCKTACNVLIRSLCMEDRILEAFDLFDRMICTGAFPSFWCYN 256
KLD A +F D+L +GC P N L++ L E +A L D M G FP Y
Sbjct: 490 KLDTAVHFMDKLMNLGCMPLLFTYNSLVKCLSQEGLFEDAKSLVDLMQDRGIFPDQATYL 549
Query: 257 ILIDGLCFLGNLDESLYVFDEMIKSGTRPTSHLYKSLV 370
I+++ C G+L + + D+M G +P +Y ++
Sbjct: 550 IMVNEHCKHGDLASAFDILDQMEDRGMKPGVAIYDCII 587
>gb|AFW81312.1| hypothetical protein ZEAMMB73_082399 [Zea mays]
Length = 798
Score = 86.7 bits (213), Expect = 3e-15
Identities = 43/108 (39%), Positives = 62/108 (57%)
Frame = +2
Query: 47 SMIICYCRLGKLDKAKNFADELFGIGCYPCKTACNVLIRSLCMEDRILEAFDLFDRMICT 226
S+I C +G+ K + A E+ G +P N ++ +LC E R++EA D FD +I
Sbjct: 453 SLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHI 512
Query: 227 GAFPSFWCYNILIDGLCFLGNLDESLYVFDEMIKSGTRPTSHLYKSLV 370
G P+ YN LIDG CF+G +DES+ FD M+ G RP S Y +L+
Sbjct: 513 GVKPNVVSYNTLIDGYCFVGKMDESIKQFDRMVSIGLRPDSWTYNALL 560
Score = 58.5 bits (140), Expect = 9e-07
Identities = 28/92 (30%), Positives = 50/92 (54%)
Frame = +2
Query: 65 CRLGKLDKAKNFADELFGIGCYPCKTACNVLIRSLCMEDRILEAFDLFDRMICTGAFPSF 244
C+ G++ +A++F D + IG P + N LI C ++ E+ FDRM+ G P
Sbjct: 494 CKEGRVVEAQDFFDMVIHIGVKPNVVSYNTLIDGYCFVGKMDESIKQFDRMVSIGLRPDS 553
Query: 245 WCYNILIDGLCFLGNLDESLYVFDEMIKSGTR 340
W YN L++G G ++++L ++ EM + +
Sbjct: 554 WTYNALLNGYFKNGRVEDALALYREMFRKDVK 585
Score = 55.5 bits (132), Expect = 8e-06
Identities = 33/99 (33%), Positives = 49/99 (49%)
Frame = +2
Query: 74 GKLDKAKNFADELFGIGCYPCKTACNVLIRSLCMEDRILEAFDLFDRMICTGAFPSFWCY 253
G++DKA DE+ G G P + LI LC + +A + M G P+ Y
Sbjct: 217 GEVDKAYFLFDEMIGQGFPPDVVTYSSLIDGLCKAQAMNKAEAILQHMFDKGVMPNTRTY 276
Query: 254 NILIDGLCFLGNLDESLYVFDEMIKSGTRPTSHLYKSLV 370
NI+I G C LG L+E++ + +M SG +P Y L+
Sbjct: 277 NIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYILLI 315
>ref|XP_006384788.1| hypothetical protein POPTR_0004s21110g [Populus trichocarpa]
gi|550341556|gb|ERP62585.1| hypothetical protein
POPTR_0004s21110g [Populus trichocarpa]
Length = 1025
Score = 85.1 bits (209), Expect = 9e-15
Identities = 46/124 (37%), Positives = 68/124 (54%), Gaps = 2/124 (1%)
Frame = +2
Query: 2 LFVRLRIVPVPSVLQSMIICYCRLGKLDKAKNFADELFGIG-CYPCKTACNVLIRSLCME 178
L V I P +++ S++IC +LGKLD A D G G C AC+ +++ +
Sbjct: 116 LVVARGIEPDSNIVNSLVICLAKLGKLDDAVKLFDRHIGSGDCLVSNAACSTILKGFYEQ 175
Query: 179 DRILEAFDLFDRMICTGAFPSFWCYNILIDGLCFLGNLDESLYVFDEMIK-SGTRPTSHL 355
D+ +EAFD F R+ W YN+LIDGLC G + E++ V D M + +G PT H+
Sbjct: 176 DKFVEAFDYFVRISDANVKLGMWAYNVLIDGLCQQGYVGEAIEVLDIMCRITGLPPTLHM 235
Query: 356 YKSL 367
K+L
Sbjct: 236 LKTL 239
>gb|AFW81308.1| hypothetical protein ZEAMMB73_549819 [Zea mays]
Length = 795
Score = 85.1 bits (209), Expect = 9e-15
Identities = 43/108 (39%), Positives = 60/108 (55%)
Frame = +2
Query: 47 SMIICYCRLGKLDKAKNFADELFGIGCYPCKTACNVLIRSLCMEDRILEAFDLFDRMICT 226
S+I C +G+ K + A E+ G +P N ++ +LC E R++EA D FD +I
Sbjct: 450 SLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHI 509
Query: 227 GAFPSFWCYNILIDGLCFLGNLDESLYVFDEMIKSGTRPTSHLYKSLV 370
G P YN LIDG CF+G +DES+ D M+ G RP S Y SL+
Sbjct: 510 GVKPDVVSYNTLIDGYCFVGKMDESIKQLDRMVSIGLRPDSWTYNSLL 557
Score = 56.2 bits (134), Expect = 5e-06
Identities = 33/99 (33%), Positives = 47/99 (47%)
Frame = +2
Query: 74 GKLDKAKNFADELFGIGCYPCKTACNVLIRSLCMEDRILEAFDLFDRMICTGAFPSFWCY 253
G++DKA E+ G G P N LI LC + +A + M G P Y
Sbjct: 214 GEVDKAYFLFHEMMGQGLPPDVVTYNSLIDGLCKAQAMDKAVAILQHMFDKGVMPDTRTY 273
Query: 254 NILIDGLCFLGNLDESLYVFDEMIKSGTRPTSHLYKSLV 370
NI+I G C LG L+E++ + +M SG +P Y L+
Sbjct: 274 NIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYSLLI 312
Score = 55.8 bits (133), Expect = 6e-06
Identities = 27/92 (29%), Positives = 49/92 (53%)
Frame = +2
Query: 65 CRLGKLDKAKNFADELFGIGCYPCKTACNVLIRSLCMEDRILEAFDLFDRMICTGAFPSF 244
C+ G++ +A++F D + IG P + N LI C ++ E+ DRM+ G P
Sbjct: 491 CKEGRVVEAQDFFDMVIHIGVKPDVVSYNTLIDGYCFVGKMDESIKQLDRMVSIGLRPDS 550
Query: 245 WCYNILIDGLCFLGNLDESLYVFDEMIKSGTR 340
W YN L++G G ++++L ++ EM + +
Sbjct: 551 WTYNSLLNGYFKNGRVEDALALYREMFRKDVK 582
>ref|XP_004979592.1| PREDICTED: protein Rf1, mitochondrial-like [Setaria italica]
Length = 571
Score = 84.3 bits (207), Expect = 2e-14
Identities = 41/117 (35%), Positives = 66/117 (56%)
Frame = +2
Query: 20 IVPVPSVLQSMIICYCRLGKLDKAKNFADELFGIGCYPCKTACNVLIRSLCMEDRILEAF 199
+ P + Q +I +C G L KAK E+ G P N +I SLC E R+++A
Sbjct: 216 VAPSIATYQCLIQGFCTHGGLLKAKELVFEMMSKGMRPDIVHLNSIINSLCKEGRVVDAH 275
Query: 200 DLFDRMICTGAFPSFWCYNILIDGLCFLGNLDESLYVFDEMIKSGTRPTSHLYKSLV 370
D+FD ++ G P+ + Y+ L+DG C +G ++++L VFD M+ +G P +Y +LV
Sbjct: 276 DIFDLLVSIGLHPNVFVYSSLVDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYGTLV 332
Score = 67.0 bits (162), Expect = 3e-09
Identities = 34/106 (32%), Positives = 57/106 (53%)
Frame = +2
Query: 41 LQSMIICYCRLGKLDKAKNFADELFGIGCYPCKTACNVLIRSLCMEDRILEAFDLFDRMI 220
L S+I C+ G++ A + D L IG +P + L+ C+ ++ +A +FD M+
Sbjct: 258 LNSIINSLCKEGRVVDAHDIFDLLVSIGLHPNVFVYSSLVDGYCLVGKMEKALRVFDAMV 317
Query: 221 CTGAFPSFWCYNILIDGLCFLGNLDESLYVFDEMIKSGTRPTSHLY 358
G P+ Y L++G C LG +D+ L VF EM+ G +P++ Y
Sbjct: 318 SAGIEPNVVVYGTLVNGYCKLGRIDDGLSVFREMVHKGIKPSTIAY 363
Score = 60.8 bits (146), Expect = 2e-07
Identities = 37/123 (30%), Positives = 57/123 (46%)
Frame = +2
Query: 2 LFVRLRIVPVPSVLQSMIICYCRLGKLDKAKNFADELFGIGCYPCKTACNVLIRSLCMED 181
L V + + P V S++ YC +GK++KA D + G P L+ C
Sbjct: 280 LLVSIGLHPNVFVYSSLVDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYGTLVNGYCKLG 339
Query: 182 RILEAFDLFDRMICTGAFPSFWCYNILIDGLCFLGNLDESLYVFDEMIKSGTRPTSHLYK 361
RI + +F M+ G PS YNI++DGL G + F EMI+SG + Y
Sbjct: 340 RIDDGLSVFREMVHKGIKPSTIAYNIVLDGLFRAGRTVSAKERFHEMIESGISVGTATYN 399
Query: 362 SLV 370
+++
Sbjct: 400 TVL 402
Score = 57.4 bits (137), Expect = 2e-06
Identities = 32/120 (26%), Positives = 58/120 (48%)
Frame = +2
Query: 11 RLRIVPVPSVLQSMIICYCRLGKLDKAKNFADELFGIGCYPCKTACNVLIRSLCMEDRIL 190
R ++P S++ C+ GK+ +AK+ D + G P + +L+ E ++
Sbjct: 73 RRGLLPDIGTWNSLMASLCKHGKIKEAKDVFDSIATKGQEPDTVSYLILLDGYATEGCLV 132
Query: 191 EAFDLFDRMICTGAFPSFWCYNILIDGLCFLGNLDESLYVFDEMIKSGTRPTSHLYKSLV 370
+ DLF+ M+ G P +N+LI G G LD ++ +F EM G +P Y +++
Sbjct: 133 DMTDLFNLMLGDGVAPDVRIFNVLIKGYAKCGMLDRAMIIFSEMRHQGAKPDVVTYLTVI 192
>ref|XP_004979582.1| PREDICTED: protein Rf1, mitochondrial-like isoform X1 [Setaria
italica] gi|514809522|ref|XP_004979583.1| PREDICTED:
protein Rf1, mitochondrial-like isoform X2 [Setaria
italica] gi|514809524|ref|XP_004979584.1| PREDICTED:
protein Rf1, mitochondrial-like isoform X3 [Setaria
italica]
Length = 811
Score = 83.6 bits (205), Expect = 3e-14
Identities = 41/117 (35%), Positives = 65/117 (55%)
Frame = +2
Query: 20 IVPVPSVLQSMIICYCRLGKLDKAKNFADELFGIGCYPCKTACNVLIRSLCMEDRILEAF 199
+ P + Q +I +C G L KAK E+ G P N +I SLC E R+++A
Sbjct: 456 VAPSIATYQCLIQGFCTHGGLLKAKELVFEMMSKGMRPDIVHLNSIINSLCKEGRVVDAQ 515
Query: 200 DLFDRMICTGAFPSFWCYNILIDGLCFLGNLDESLYVFDEMIKSGTRPTSHLYKSLV 370
D+FD ++ G P + Y+ L+DG C +G ++++L VFD M+ +G P +Y +LV
Sbjct: 516 DIFDLLVSIGLHPDVFAYSSLVDGYCLVGKMEKALRVFDAMVSAGIEPDVAVYGTLV 572
Score = 68.2 bits (165), Expect = 1e-09
Identities = 34/106 (32%), Positives = 58/106 (54%)
Frame = +2
Query: 41 LQSMIICYCRLGKLDKAKNFADELFGIGCYPCKTACNVLIRSLCMEDRILEAFDLFDRMI 220
L S+I C+ G++ A++ D L IG +P A + L+ C+ ++ +A +FD M+
Sbjct: 498 LNSIINSLCKEGRVVDAQDIFDLLVSIGLHPDVFAYSSLVDGYCLVGKMEKALRVFDAMV 557
Query: 221 CTGAFPSFWCYNILIDGLCFLGNLDESLYVFDEMIKSGTRPTSHLY 358
G P Y L++G C +G +D+ L VF EM+ G +P++ Y
Sbjct: 558 SAGIEPDVAVYGTLVNGYCKIGRIDDGLSVFREMVHKGIKPSTIAY 603
Score = 59.7 bits (143), Expect = 4e-07
Identities = 36/123 (29%), Positives = 56/123 (45%)
Frame = +2
Query: 2 LFVRLRIVPVPSVLQSMIICYCRLGKLDKAKNFADELFGIGCYPCKTACNVLIRSLCMED 181
L V + + P S++ YC +GK++KA D + G P L+ C
Sbjct: 520 LLVSIGLHPDVFAYSSLVDGYCLVGKMEKALRVFDAMVSAGIEPDVAVYGTLVNGYCKIG 579
Query: 182 RILEAFDLFDRMICTGAFPSFWCYNILIDGLCFLGNLDESLYVFDEMIKSGTRPTSHLYK 361
RI + +F M+ G PS YNI++DGL G + F EMI+SG + Y
Sbjct: 580 RIDDGLSVFREMVHKGIKPSTIAYNIVLDGLFQAGRTVSAKERFHEMIESGISVGTDTYN 639
Query: 362 SLV 370
+++
Sbjct: 640 TVL 642
Score = 57.0 bits (136), Expect = 3e-06
Identities = 31/120 (25%), Positives = 59/120 (49%)
Frame = +2
Query: 11 RLRIVPVPSVLQSMIICYCRLGKLDKAKNFADELFGIGCYPCKTACNVLIRSLCMEDRIL 190
R ++P + S++ C+ GK+ +A++ D + G P + +L+ E +
Sbjct: 313 RRGLLPDIATWNSLMASLCKHGKIKEARDVFDSIATKGQEPDTVSYLILLDGYATEGCFV 372
Query: 191 EAFDLFDRMICTGAFPSFWCYNILIDGLCFLGNLDESLYVFDEMIKSGTRPTSHLYKSLV 370
+ DLF+ M+ G P +N+LI G G LD ++ +F EM G +P + Y +++
Sbjct: 373 DMTDLFNLMLGDGVAPDVRIFNVLIKGYAKCGMLDRAMIIFSEMRHQGAKPDAVTYLTVI 432
>ref|XP_006828862.1| hypothetical protein AMTR_s00001p00165480 [Amborella trichopoda]
gi|548833841|gb|ERM96278.1| hypothetical protein
AMTR_s00001p00165480 [Amborella trichopoda]
Length = 903
Score = 82.0 bits (201), Expect = 8e-14
Identities = 41/111 (36%), Positives = 61/111 (54%)
Frame = +2
Query: 38 VLQSMIICYCRLGKLDKAKNFADELFGIGCYPCKTACNVLIRSLCMEDRILEAFDLFDRM 217
+ S+I+ CR LD A N + ++G GC P ++LI LC + R+ EAF LF M
Sbjct: 239 IYTSLILGNCRRNNLDNAFNLFEMMYGDGCIPNAVTYSILISGLCEQGRMEEAFQLFGEM 298
Query: 218 ICTGAFPSFWCYNILIDGLCFLGNLDESLYVFDEMIKSGTRPTSHLYKSLV 370
G PS + Y +LI LC + + +S+ +F+EM+K G P H Y L+
Sbjct: 299 TEKGCEPSVYTYTVLIKALCGIRQVYKSIDLFNEMVKKGCVPNVHTYTVLI 349
Score = 63.9 bits (154), Expect = 2e-08
Identities = 33/116 (28%), Positives = 59/116 (50%)
Frame = +2
Query: 23 VPVPSVLQSMIICYCRLGKLDKAKNFADELFGIGCYPCKTACNVLIRSLCMEDRILEAFD 202
+P +I C G++++A E+ GC P VLI++LC ++ ++ D
Sbjct: 269 IPNAVTYSILISGLCEQGRMEEAFQLFGEMTEKGCEPSVYTYTVLIKALCGIRQVYKSID 328
Query: 203 LFDRMICTGAFPSFWCYNILIDGLCFLGNLDESLYVFDEMIKSGTRPTSHLYKSLV 370
LF+ M+ G P+ Y +LIDG C L+E+ + M++ G P++ Y +L+
Sbjct: 329 LFNEMVKKGCVPNVHTYTVLIDGWCRENKLEEANGLLKMMLEKGVLPSTITYNALI 384
Score = 63.9 bits (154), Expect = 2e-08
Identities = 37/117 (31%), Positives = 55/117 (47%)
Frame = +2
Query: 20 IVPVPSVLQSMIICYCRLGKLDKAKNFADELFGIGCYPCKTACNVLIRSLCMEDRILEAF 199
++P ++I YC+ G++ A + C P N LI LC E + +A
Sbjct: 373 VLPSTITYNALINGYCKEGRVFSAFELLSTMEKRKCKPNTRTYNELIDGLCRERKPYKAM 432
Query: 200 DLFDRMICTGAFPSFWCYNILIDGLCFLGNLDESLYVFDEMIKSGTRPTSHLYKSLV 370
L +M+ G FPS YN LI+G C G LD +L +F+ M + G P Y L+
Sbjct: 433 SLLQKMLDNGLFPSNVTYNTLINGFCGEGKLDMALCLFNSMSRIGLYPDGFTYTVLI 489
Score = 61.6 bits (148), Expect = 1e-07
Identities = 35/117 (29%), Positives = 57/117 (48%)
Frame = +2
Query: 20 IVPVPSVLQSMIICYCRLGKLDKAKNFADELFGIGCYPCKTACNVLIRSLCMEDRILEAF 199
+ P ++I +C GKLD A + + IG YP VLI LC + ++ +A
Sbjct: 443 LFPSNVTYNTLINGFCGEGKLDMALCLFNSMSRIGLYPDGFTYTVLIDGLCKKGQLEQAH 502
Query: 200 DLFDRMICTGAFPSFWCYNILIDGLCFLGNLDESLYVFDEMIKSGTRPTSHLYKSLV 370
+ F+ M+ G Y LIDG C ++ + + D+M++ G P SH + SL+
Sbjct: 503 EFFNEMVQEGICLDEVTYTALIDGYCKNEMMENAFALLDKMLEFGCEPNSHTFNSLM 559
Score = 61.2 bits (147), Expect = 1e-07
Identities = 33/102 (32%), Positives = 51/102 (50%)
Frame = +2
Query: 65 CRLGKLDKAKNFADELFGIGCYPCKTACNVLIRSLCMEDRILEAFDLFDRMICTGAFPSF 244
CR K KA + ++ G +P N LI C E ++ A LF+ M G +P
Sbjct: 423 CRERKPYKAMSLLQKMLDNGLFPSNVTYNTLINGFCGEGKLDMALCLFNSMSRIGLYPDG 482
Query: 245 WCYNILIDGLCFLGNLDESLYVFDEMIKSGTRPTSHLYKSLV 370
+ Y +LIDGLC G L+++ F+EM++ G Y +L+
Sbjct: 483 FTYTVLIDGLCKKGQLEQAHEFFNEMVQEGICLDEVTYTALI 524
Score = 60.5 bits (145), Expect = 2e-07
Identities = 33/108 (30%), Positives = 50/108 (46%)
Frame = +2
Query: 47 SMIICYCRLGKLDKAKNFADELFGIGCYPCKTACNVLIRSLCMEDRILEAFDLFDRMICT 226
++I YC+ ++ A D++ GC P N L+ C E+ + + LF +M+
Sbjct: 522 ALIDGYCKNEMMENAFALLDKMLEFGCEPNSHTFNSLMNGFCRENMLPQEHMLFGKMLKR 581
Query: 227 GAFPSFWCYNILIDGLCFLGNLDESLYVFDEMIKSGTRPTSHLYKSLV 370
G PS Y ILI+G C G S V D MI+ P + Y +V
Sbjct: 582 GLVPSVITYTILINGFCQAGKFSLSFEVLDRMIQENCFPNVYTYTVMV 629
Score = 56.6 bits (135), Expect = 3e-06
Identities = 35/121 (28%), Positives = 55/121 (45%)
Frame = +2
Query: 8 VRLRIVPVPSVLQSMIICYCRLGKLDKAKNFADELFGIGCYPCKTACNVLIRSLCMEDRI 187
V+ VP +I +CR KL++A + G P N LI C E R+
Sbjct: 334 VKKGCVPNVHTYTVLIDGWCRENKLEEANGLLKMMLEKGVLPSTITYNALINGYCKEGRV 393
Query: 188 LEAFDLFDRMICTGAFPSFWCYNILIDGLCFLGNLDESLYVFDEMIKSGTRPTSHLYKSL 367
AF+L M P+ YN LIDGLC +++ + +M+ +G P++ Y +L
Sbjct: 394 FSAFELLSTMEKRKCKPNTRTYNELIDGLCRERKPYKAMSLLQKMLDNGLFPSNVTYNTL 453
Query: 368 V 370
+
Sbjct: 454 I 454
Score = 55.5 bits (132), Expect = 8e-06
Identities = 29/115 (25%), Positives = 50/115 (43%)
Frame = +2
Query: 26 PVPSVLQSMIICYCRLGKLDKAKNFADELFGIGCYPCKTACNVLIRSLCMEDRILEAFDL 205
P S++ +CR L + ++ G P +LI C + +F++
Sbjct: 550 PNSHTFNSLMNGFCRENMLPQEHMLFGKMLKRGLVPSVITYTILINGFCQAGKFSLSFEV 609
Query: 206 FDRMICTGAFPSFWCYNILIDGLCFLGNLDESLYVFDEMIKSGTRPTSHLYKSLV 370
DRMI FP+ + Y +++DGLC G +E+ + + + G P Y LV
Sbjct: 610 LDRMIQENCFPNVYTYTVMVDGLCKRGRFEEAEMLLYNLFEMGICPNHVTYTVLV 664
>ref|XP_002312829.1| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|222849237|gb|EEE86784.1|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 734
Score = 82.0 bits (201), Expect = 8e-14
Identities = 45/116 (38%), Positives = 64/116 (55%), Gaps = 2/116 (1%)
Frame = +2
Query: 26 PVPSVLQSMIICYCRLGKLDKAKNFADELFGIG-CYPCKTACNVLIRSLCMEDRILEAFD 202
P +++ SMIIC +LGKLD A D L G C AC +++ +DR LEAFD
Sbjct: 124 PDSNIVNSMIICLAKLGKLDDAVRLFDRLIGSDDCVLSNAACIMILEGFYEQDRFLEAFD 183
Query: 203 LFDRMICTGAFPSFWCYNILIDGLCFLGNLDESLYVFDEMIK-SGTRPTSHLYKSL 367
R+ W Y +LI+GLC + E++ VFD M K +G+ PT H++K+L
Sbjct: 184 YLVRISDANVKLGMWVYTVLINGLCHQRYVGEAIQVFDIMCKRTGSPPTLHMFKTL 239
>ref|XP_004979523.1| PREDICTED: protein Rf1, mitochondrial-like [Setaria italica]
Length = 814
Score = 80.5 bits (197), Expect = 2e-13
Identities = 40/117 (34%), Positives = 64/117 (54%)
Frame = +2
Query: 20 IVPVPSVLQSMIICYCRLGKLDKAKNFADELFGIGCYPCKTACNVLIRSLCMEDRILEAF 199
+ P + Q +I +C G L KAK E+ G P +I SLC E R+++A
Sbjct: 459 VAPSIATYQCLIQGFCTHGGLLKAKELVFEMMSKGMRPDIVFLTSIINSLCKEGRVVDAQ 518
Query: 200 DLFDRMICTGAFPSFWCYNILIDGLCFLGNLDESLYVFDEMIKSGTRPTSHLYKSLV 370
D+FD ++ G P + Y+ L+DG C +G ++++L VFD M+ +G P +Y +LV
Sbjct: 519 DIFDILVSIGLHPDVFAYSSLMDGYCLVGKMEKALRVFDAMVSAGIEPNVAVYGTLV 575
Score = 67.4 bits (163), Expect = 2e-09
Identities = 34/106 (32%), Positives = 59/106 (55%)
Frame = +2
Query: 41 LQSMIICYCRLGKLDKAKNFADELFGIGCYPCKTACNVLIRSLCMEDRILEAFDLFDRMI 220
L S+I C+ G++ A++ D L IG +P A + L+ C+ ++ +A +FD M+
Sbjct: 501 LTSIINSLCKEGRVVDAQDIFDILVSIGLHPDVFAYSSLMDGYCLVGKMEKALRVFDAMV 560
Query: 221 CTGAFPSFWCYNILIDGLCFLGNLDESLYVFDEMIKSGTRPTSHLY 358
G P+ Y L++G C +G +D+ L VF EM+ G +P++ Y
Sbjct: 561 SAGIEPNVAVYGTLVNGYCKIGRIDDGLSVFREMVHKGIKPSTIAY 606
Score = 58.2 bits (139), Expect = 1e-06
Identities = 35/123 (28%), Positives = 56/123 (45%)
Frame = +2
Query: 2 LFVRLRIVPVPSVLQSMIICYCRLGKLDKAKNFADELFGIGCYPCKTACNVLIRSLCMED 181
+ V + + P S++ YC +GK++KA D + G P L+ C
Sbjct: 523 ILVSIGLHPDVFAYSSLMDGYCLVGKMEKALRVFDAMVSAGIEPNVAVYGTLVNGYCKIG 582
Query: 182 RILEAFDLFDRMICTGAFPSFWCYNILIDGLCFLGNLDESLYVFDEMIKSGTRPTSHLYK 361
RI + +F M+ G PS YNI++DGL G + F EMI+SG + Y
Sbjct: 583 RIDDGLSVFREMVHKGIKPSTIAYNIVLDGLFRAGRTVSAKERFHEMIESGISVDTGTYN 642
Query: 362 SLV 370
+++
Sbjct: 643 TVL 645
Score = 56.2 bits (134), Expect = 5e-06
Identities = 29/117 (24%), Positives = 58/117 (49%)
Frame = +2
Query: 20 IVPVPSVLQSMIICYCRLGKLDKAKNFADELFGIGCYPCKTACNVLIRSLCMEDRILEAF 199
++P + S++ C+ GK+ +A++ D + G P + +++ E ++
Sbjct: 319 LLPEIATWNSLMASLCKHGKIKEARDVFDSIATKGQEPNTVSYLIMLDGYATEGCFVDMT 378
Query: 200 DLFDRMICTGAFPSFWCYNILIDGLCFLGNLDESLYVFDEMIKSGTRPTSHLYKSLV 370
DLF+ M+ G P +N+LI G G LD ++ +F EM + G +P Y +++
Sbjct: 379 DLFNLMLGDGVAPDVRIFNVLIKGYAKCGMLDRAMIIFSEMRQQGAKPNVVTYLTVI 435
>ref|XP_006423135.1| hypothetical protein CICLE_v10030406mg [Citrus clementina]
gi|568851376|ref|XP_006479369.1| PREDICTED:
pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Citrus sinensis]
gi|557525069|gb|ESR36375.1| hypothetical protein
CICLE_v10030406mg [Citrus clementina]
Length = 645
Score = 80.1 bits (196), Expect = 3e-13
Identities = 44/117 (37%), Positives = 62/117 (52%)
Frame = +2
Query: 20 IVPVPSVLQSMIICYCRLGKLDKAKNFADELFGIGCYPCKTACNVLIRSLCMEDRILEAF 199
+VP ++I YC G L+ A +F DE+ G P + N+LI L ME +++EA
Sbjct: 339 LVPTAVTYNTLIDGYCNKGNLEMAFSFRDEMVKQGIMPTASTYNLLIHELLMERKMVEAD 398
Query: 200 DLFDRMICTGAFPSFWCYNILIDGLCFLGNLDESLYVFDEMIKSGTRPTSHLYKSLV 370
D+ M G P YNILI+G C GN ++ + DEMI G +PT Y SL+
Sbjct: 399 DMLKEMGEKGIVPDSITYNILINGYCRCGNAKKAFSLHDEMIHKGIQPTMLTYTSLI 455
Score = 64.3 bits (155), Expect = 2e-08
Identities = 37/117 (31%), Positives = 54/117 (46%)
Frame = +2
Query: 20 IVPVPSVLQSMIICYCRLGKLDKAKNFADELFGIGCYPCKTACNVLIRSLCMEDRILEAF 199
IVP +I YCR G KA + DE+ G P LI L ++R++EA
Sbjct: 409 IVPDSITYNILINGYCRCGNAKKAFSLHDEMIHKGIQPTMLTYTSLIFVLSKQNRMIEAD 468
Query: 200 DLFDRMICTGAFPSFWCYNILIDGLCFLGNLDESLYVFDEMIKSGTRPTSHLYKSLV 370
LF+ + G P +N LIDG C GN++ + + EM + P Y +L+
Sbjct: 469 QLFENFLAKGMLPDIVMFNALIDGHCTNGNIERAFSLLKEMDRMKVHPDEVTYNTLM 525
Score = 63.5 bits (153), Expect = 3e-08
Identities = 36/119 (30%), Positives = 57/119 (47%)
Frame = +2
Query: 14 LRIVPVPSVLQSMIICYCRLGKLDKAKNFADELFGIGCYPCKTACNVLIRSLCMEDRILE 193
L I P +++ YC G+++ A+ + + G P + +C E R+ E
Sbjct: 267 LGIKPNIVTYNTIVHGYCLSGRIEGARLVLNAMKSRGVQPDSYTYGSFVSGMCKEGRLEE 326
Query: 194 AFDLFDRMICTGAFPSFWCYNILIDGLCFLGNLDESLYVFDEMIKSGTRPTSHLYKSLV 370
A + ++M G P+ YN LIDG C GNL+ + DEM+K G PT+ Y L+
Sbjct: 327 ASRMLEQMKENGLVPTAVTYNTLIDGYCNKGNLEMAFSFRDEMVKQGIMPTASTYNLLI 385
Score = 62.8 bits (151), Expect = 5e-08
Identities = 35/120 (29%), Positives = 58/120 (48%)
Frame = +2
Query: 11 RLRIVPVPSVLQSMIICYCRLGKLDKAKNFADELFGIGCYPCKTACNVLIRSLCMEDRIL 190
R+RI MI C+ GKL KAK+F + +G P N ++ C+ RI
Sbjct: 231 RMRIKSSVCTFNIMINLLCKEGKLQKAKDFLGFMESLGIKPNIVTYNTIVHGYCLSGRIE 290
Query: 191 EAFDLFDRMICTGAFPSFWCYNILIDGLCFLGNLDESLYVFDEMIKSGTRPTSHLYKSLV 370
A + + M G P + Y + G+C G L+E+ + ++M ++G PT+ Y +L+
Sbjct: 291 GARLVLNAMKSRGVQPDSYTYGSFVSGMCKEGRLEEASRMLEQMKENGLVPTAVTYNTLI 350
Score = 57.4 bits (137), Expect = 2e-06
Identities = 33/122 (27%), Positives = 60/122 (49%)
Frame = +2
Query: 5 FVRLRIVPVPSVLQSMIICYCRLGKLDKAKNFADELFGIGCYPCKTACNVLIRSLCMEDR 184
F+ ++P + ++I +C G +++A + E+ + +P + N L+ C + +
Sbjct: 474 FLAKGMLPDIVMFNALIDGHCTNGNIERAFSLLKEMDRMKVHPDEVTYNTLMHGRCRQGK 533
Query: 185 ILEAFDLFDRMICTGAFPSFWCYNILIDGLCFLGNLDESLYVFDEMIKSGTRPTSHLYKS 364
+ EA L D+M G P YN LI G G++ ++ V DEM+ G PT Y +
Sbjct: 534 VEEARRLLDQMKRRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMLSVGFNPTRLTYNA 593
Query: 365 LV 370
L+
Sbjct: 594 LI 595
Score = 56.6 bits (135), Expect = 3e-06
Identities = 34/120 (28%), Positives = 57/120 (47%)
Frame = +2
Query: 11 RLRIVPVPSVLQSMIICYCRLGKLDKAKNFADELFGIGCYPCKTACNVLIRSLCMEDRIL 190
R+++ P +++ CR GK+++A+ D++ G P + N LI +
Sbjct: 511 RMKVHPDEVTYNTLMHGRCRQGKVEEARRLLDQMKRRGIKPDHISYNTLISGYSKRGDMK 570
Query: 191 EAFDLFDRMICTGAFPSFWCYNILIDGLCFLGNLDESLYVFDEMIKSGTRPTSHLYKSLV 370
+AF + D M+ G P+ YN LI GLC D + + EM+ G P + Y SL+
Sbjct: 571 DAFRVRDEMLSVGFNPTRLTYNALIQGLCKNQEGDLAEELLREMVSKGITPDDNTYFSLI 630