BLASTX nr result

ID: Sinomenium22_contig00045293 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium22_contig00045293
         (260 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEV41076.1| putative UBX domain-containing protein [Oryza min...    39   6e-08

>gb|AEV41076.1| putative UBX domain-containing protein [Oryza minuta]
          Length = 402

 Score = 39.3 bits (90), Expect(3) = 6e-08
 Identities = 17/19 (89%), Positives = 17/19 (89%)
 Frame = +3

Query: 78  EAVAQTIRSNFIFWQAYDD 134
           EAVAQTIRSNFIFWQ Y D
Sbjct: 158 EAVAQTIRSNFIFWQVYHD 176



 Score = 33.9 bits (76), Expect(3) = 6e-08
 Identities = 12/20 (60%), Positives = 16/20 (80%)
 Frame = +1

Query: 199 DPISRQKLRSWNGMIQPESL 258
           DPI+ QK+R WNGM+ P+ L
Sbjct: 199 DPITGQKMRGWNGMVHPDRL 218



 Score = 28.5 bits (62), Expect(3) = 6e-08
 Identities = 14/27 (51%), Positives = 18/27 (66%)
 Frame = +2

Query: 137 TEGMKVRIYYKLDSVPAVLVMTLFRGK 217
           +EG KV  YY L SVPAVL++    G+
Sbjct: 178 SEGRKVCTYYNLVSVPAVLLIDPITGQ 204


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