BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium22_contig00043593
         (579 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_001004218.1| RNA polymerase alpha subunit [Ranunculus mac...    64   4e-08
ref|YP_008081397.1| RNA polymerase alpha subunit (chloroplast) [...    63   6e-08
ref|YP_001294216.1| RNA polymerase alpha subunit [Buxus microphy...    63   6e-08
ref|YP_008993724.1| RNA polymerase alpha subunit (chloroplast) [...    62   1e-07
ref|YP_008993896.1| RNA polymerase alpha subunit (chloroplast) [...    62   1e-07
ref|YP_008993810.1| RNA polymerase alpha subunit (chloroplast) [...    62   1e-07
ref|YP_008993638.1| RNA polymerase alpha subunit (chloroplast) [...    62   1e-07
ref|YP_008993466.1| RNA polymerase alpha subunit (chloroplast) [...    62   1e-07
ref|YP_008993208.1| RNA polymerase alpha subunit (chloroplast) [...    62   1e-07
ref|YP_007474568.1| RNA polymerase alpha subunit (chloroplast) [...    62   1e-07
ref|YP_007474402.1| RNA polymerase alpha subunit (chloroplast) [...    62   1e-07
ref|YP_006576146.1| RpoA (chloroplast) [Magnolia denudata] gi|57...    62   1e-07
ref|YP_740234.1| RNA polymerase alpha subunit [Liriodendron tuli...    62   1e-07
ref|YP_008993294.1| RNA polymerase alpha subunit (chloroplast) [...    62   1e-07
gb|ADD31223.1| RNA polymerase alpha subunit protein [Berberidops...    62   1e-07
gb|ADD31215.1| RNA polymerase alpha subunit protein [Ilex cornuta]     61   2e-07
gb|AEX98283.1| RNA polymerase alpha subunit (chloroplast) [Magno...    61   2e-07
ref|YP_004563899.1| RNA polymerase alpha subunit [Nelumbo lutea]...    60   3e-07
gb|ADD31222.1| RNA polymerase alpha subunit protein [Ximenia ame...    60   3e-07
ref|YP_008993380.1| RNA polymerase alpha subunit (chloroplast) [...    60   4e-07

>ref|YP_001004218.1| RNA polymerase alpha subunit [Ranunculus macranthus]
           gi|158514028|sp|A1XGS0.1|RPOA_RANMC RecName:
           Full=DNA-directed RNA polymerase subunit alpha;
           Short=PEP; AltName: Full=Plastid-encoded RNA polymerase
           subunit alpha; Short=RNA polymerase subunit alpha
           gi|85540836|gb|ABC70788.1| RNA polymerase alpha subunit
           [Ranunculus macranthus]
          Length = 346

 Score = 63.5 bits (153), Expect = 4e-08
 Identities = 31/41 (75%), Positives = 37/41 (90%), Gaps = 1/41 (2%)
 Frame = +3

Query: 426 QKIIMKIEHFRIEDLKQILNILQKHF-IIDLPKNKFSI*NP 545
           Q+ +MKIEHFRIED+KQIL+I+QKHF +IDLPKNKF I NP
Sbjct: 304 QEDLMKIEHFRIEDVKQILDIIQKHFVVIDLPKNKFLIGNP 344


>ref|YP_008081397.1| RNA polymerase alpha subunit (chloroplast) [Tetracentron sinense]
           gi|479279235|gb|AGJ72089.1| RNA polymerase alpha subunit
           (chloroplast) [Tetracentron sinense]
          Length = 337

 Score = 62.8 bits (151), Expect = 6e-08
 Identities = 29/35 (82%), Positives = 33/35 (94%)
 Frame = +3

Query: 426 QKIIMKIEHFRIEDLKQILNILQKHFIIDLPKNKF 530
           Q+ +MKIEHFRIED+KQIL+ILQKHF IDLPKNKF
Sbjct: 303 QEDLMKIEHFRIEDVKQILDILQKHFSIDLPKNKF 337


>ref|YP_001294216.1| RNA polymerase alpha subunit [Buxus microphylla]
           gi|172048681|sp|A6MM68.1|RPOA_BUXMI RecName:
           Full=DNA-directed RNA polymerase subunit alpha;
           Short=PEP; AltName: Full=Plastid-encoded RNA polymerase
           subunit alpha; Short=RNA polymerase subunit alpha
           gi|146762316|gb|ABQ45280.1| RNA polymerase alpha subunit
           [Buxus microphylla]
          Length = 337

 Score = 62.8 bits (151), Expect = 6e-08
 Identities = 29/35 (82%), Positives = 32/35 (91%)
 Frame = +3

Query: 426 QKIIMKIEHFRIEDLKQILNILQKHFIIDLPKNKF 530
           Q+ +MKIEHFRIED+KQIL ILQKHF IDLPKNKF
Sbjct: 303 QEDLMKIEHFRIEDVKQILGILQKHFAIDLPKNKF 337


>ref|YP_008993724.1| RNA polymerase alpha subunit (chloroplast) [Magnolia salicifolia]
          Length = 337

 Score = 62.0 bits (149), Expect = 1e-07
 Identities = 28/35 (80%), Positives = 33/35 (94%)
 Frame = +3

Query: 426 QKIIMKIEHFRIEDLKQILNILQKHFIIDLPKNKF 530
           Q+ +M+IEHFRIED+KQIL+ILQKHF IDLPKNKF
Sbjct: 303 QEDLMRIEHFRIEDVKQILDILQKHFTIDLPKNKF 337


>ref|YP_008993896.1| RNA polymerase alpha subunit (chloroplast) [Magnolia sprengeri]
          Length = 337

 Score = 62.0 bits (149), Expect = 1e-07
 Identities = 28/35 (80%), Positives = 33/35 (94%)
 Frame = +3

Query: 426 QKIIMKIEHFRIEDLKQILNILQKHFIIDLPKNKF 530
           Q+ +M+IEHFRIED+KQIL+ILQKHF IDLPKNKF
Sbjct: 303 QEDLMRIEHFRIEDVKQILDILQKHFTIDLPKNKF 337


>ref|YP_008993810.1| RNA polymerase alpha subunit (chloroplast) [Magnolia sinica]
          Length = 337

 Score = 62.0 bits (149), Expect = 1e-07
 Identities = 28/35 (80%), Positives = 33/35 (94%)
 Frame = +3

Query: 426 QKIIMKIEHFRIEDLKQILNILQKHFIIDLPKNKF 530
           Q+ +M+IEHFRIED+KQIL+ILQKHF IDLPKNKF
Sbjct: 303 QEDLMRIEHFRIEDVKQILDILQKHFTIDLPKNKF 337


>ref|YP_008993638.1| RNA polymerase alpha subunit (chloroplast) [Magnolia odora]
          Length = 337

 Score = 62.0 bits (149), Expect = 1e-07
 Identities = 28/35 (80%), Positives = 33/35 (94%)
 Frame = +3

Query: 426 QKIIMKIEHFRIEDLKQILNILQKHFIIDLPKNKF 530
           Q+ +M+IEHFRIED+KQIL+ILQKHF IDLPKNKF
Sbjct: 303 QEDLMRIEHFRIEDVKQILDILQKHFTIDLPKNKF 337


>ref|YP_008993466.1| RNA polymerase alpha subunit (chloroplast) [Magnolia kobus]
          Length = 337

 Score = 62.0 bits (149), Expect = 1e-07
 Identities = 28/35 (80%), Positives = 33/35 (94%)
 Frame = +3

Query: 426 QKIIMKIEHFRIEDLKQILNILQKHFIIDLPKNKF 530
           Q+ +M+IEHFRIED+KQIL+ILQKHF IDLPKNKF
Sbjct: 303 QEDLMRIEHFRIEDVKQILDILQKHFTIDLPKNKF 337


>ref|YP_008993208.1| RNA polymerase alpha subunit (chloroplast) [Magnolia cathcartii]
          Length = 337

 Score = 62.0 bits (149), Expect = 1e-07
 Identities = 28/35 (80%), Positives = 33/35 (94%)
 Frame = +3

Query: 426 QKIIMKIEHFRIEDLKQILNILQKHFIIDLPKNKF 530
           Q+ +M+IEHFRIED+KQIL+ILQKHF IDLPKNKF
Sbjct: 303 QEDLMRIEHFRIEDVKQILDILQKHFTIDLPKNKF 337


>ref|YP_007474568.1| RNA polymerase alpha subunit (chloroplast) [Magnolia grandiflora]
           gi|372862875|gb|AEX98951.1| RNA polymerase alpha subunit
           (chloroplast) [Magnolia grandiflora]
           gi|372863045|gb|AEX99119.1| RNA polymerase alpha subunit
           (chloroplast) [Magnolia grandiflora]
          Length = 337

 Score = 62.0 bits (149), Expect = 1e-07
 Identities = 28/35 (80%), Positives = 33/35 (94%)
 Frame = +3

Query: 426 QKIIMKIEHFRIEDLKQILNILQKHFIIDLPKNKF 530
           Q+ +M+IEHFRIED+KQIL+ILQKHF IDLPKNKF
Sbjct: 303 QEDLMRIEHFRIEDVKQILDILQKHFTIDLPKNKF 337


>ref|YP_007474402.1| RNA polymerase alpha subunit (chloroplast) [Magnolia officinalis]
           gi|452848803|ref|YP_007474484.1| RNA polymerase alpha
           subunit (chloroplast) [Magnolia officinalis subsp.
           biloba] gi|619275767|ref|YP_009026913.1| RNA polymerase
           alpha subunit [Magnolia tripetala]
           gi|372862453|gb|AEX98534.1| RNA polymerase alpha subunit
           (chloroplast) [Magnolia officinalis]
           gi|372862536|gb|AEX98616.1| RNA polymerase alpha subunit
           (chloroplast) [Magnolia officinalis subsp. biloba]
           gi|372862621|gb|AEX98700.1| RNA polymerase alpha subunit
           (chloroplast) [Magnolia officinalis subsp. biloba]
           gi|372862706|gb|AEX98784.1| RNA polymerase alpha subunit
           (chloroplast) [Magnolia officinalis subsp. biloba]
           gi|608608435|gb|AHW51989.1| RNA polymerase alpha subunit
           [Magnolia tripetala]
          Length = 337

 Score = 62.0 bits (149), Expect = 1e-07
 Identities = 28/35 (80%), Positives = 33/35 (94%)
 Frame = +3

Query: 426 QKIIMKIEHFRIEDLKQILNILQKHFIIDLPKNKF 530
           Q+ +M+IEHFRIED+KQIL+ILQKHF IDLPKNKF
Sbjct: 303 QEDLMRIEHFRIEDVKQILDILQKHFTIDLPKNKF 337


>ref|YP_006576146.1| RpoA (chloroplast) [Magnolia denudata]
           gi|570760131|ref|YP_008993552.1| RNA polymerase alpha
           subunit (chloroplast) [Magnolia liliifera]
           gi|343887570|gb|AEM65249.1| RpoA [Magnolia denudata]
           gi|372862283|gb|AEX98366.1| RNA polymerase alpha subunit
           (chloroplast) [Magnolia denudata]
          Length = 337

 Score = 62.0 bits (149), Expect = 1e-07
 Identities = 28/35 (80%), Positives = 33/35 (94%)
 Frame = +3

Query: 426 QKIIMKIEHFRIEDLKQILNILQKHFIIDLPKNKF 530
           Q+ +M+IEHFRIED+KQIL+ILQKHF IDLPKNKF
Sbjct: 303 QEDLMRIEHFRIEDVKQILDILQKHFTIDLPKNKF 337


>ref|YP_740234.1| RNA polymerase alpha subunit [Liriodendron tulipifera]
           gi|122239940|sp|Q0G9I7.1|RPOA_LIRTU RecName:
           Full=DNA-directed RNA polymerase subunit alpha;
           Short=PEP; AltName: Full=Plastid-encoded RNA polymerase
           subunit alpha; Short=RNA polymerase subunit alpha
           gi|113201026|gb|ABI32541.1| RNA polymerase alpha subunit
           [Liriodendron tulipifera]
          Length = 337

 Score = 62.0 bits (149), Expect = 1e-07
 Identities = 28/35 (80%), Positives = 33/35 (94%)
 Frame = +3

Query: 426 QKIIMKIEHFRIEDLKQILNILQKHFIIDLPKNKF 530
           Q+ +M+IEHFRIED+KQIL+ILQKHF IDLPKNKF
Sbjct: 303 QEDLMRIEHFRIEDVKQILDILQKHFTIDLPKNKF 337


>ref|YP_008993294.1| RNA polymerase alpha subunit (chloroplast) [Magnolia dealbata]
          Length = 337

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 27/35 (77%), Positives = 33/35 (94%)
 Frame = +3

Query: 426 QKIIMKIEHFRIEDLKQILNILQKHFIIDLPKNKF 530
           Q+ +M+IEHFRIED+KQIL++LQKHF IDLPKNKF
Sbjct: 303 QEDLMRIEHFRIEDVKQILDVLQKHFTIDLPKNKF 337


>gb|ADD31223.1| RNA polymerase alpha subunit protein [Berberidopsis corallina]
          Length = 337

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 28/35 (80%), Positives = 32/35 (91%)
 Frame = +3

Query: 426 QKIIMKIEHFRIEDLKQILNILQKHFIIDLPKNKF 530
           Q+ +MKIEHFRIED+KQIL IL+KHF IDLPKNKF
Sbjct: 303 QEDLMKIEHFRIEDVKQILGILEKHFTIDLPKNKF 337


>gb|ADD31215.1| RNA polymerase alpha subunit protein [Ilex cornuta]
          Length = 337

 Score = 61.2 bits (147), Expect = 2e-07
 Identities = 27/35 (77%), Positives = 32/35 (91%)
 Frame = +3

Query: 426 QKIIMKIEHFRIEDLKQILNILQKHFIIDLPKNKF 530
           Q+ +MKIEHFRIED+KQIL +L+KHF IDLPKNKF
Sbjct: 303 QEDLMKIEHFRIEDVKQILGVLEKHFAIDLPKNKF 337


>gb|AEX98283.1| RNA polymerase alpha subunit (chloroplast) [Magnolia liliiflora]
          Length = 337

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 27/32 (84%), Positives = 31/32 (96%)
 Frame = +3

Query: 435 IMKIEHFRIEDLKQILNILQKHFIIDLPKNKF 530
           +M+IEHFRIED+KQIL+ILQKHF IDLPKNKF
Sbjct: 306 LMRIEHFRIEDVKQILDILQKHFTIDLPKNKF 337


>ref|YP_004563899.1| RNA polymerase alpha subunit [Nelumbo lutea]
           gi|224474167|gb|ACN49356.1| RNA polymerase alpha subunit
           [Nelumbo lutea] gi|383286921|gb|AFH01570.1| RNA
           polymerase alpha subunit (chloroplast) [Nelumbo lutea]
          Length = 339

 Score = 60.5 bits (145), Expect = 3e-07
 Identities = 27/35 (77%), Positives = 33/35 (94%)
 Frame = +3

Query: 426 QKIIMKIEHFRIEDLKQILNILQKHFIIDLPKNKF 530
           Q+ +MK+EHF+IED+KQIL+ILQKHF IDLPKNKF
Sbjct: 305 QEDLMKMEHFQIEDVKQILDILQKHFAIDLPKNKF 339


>gb|ADD31222.1| RNA polymerase alpha subunit protein [Ximenia americana]
          Length = 337

 Score = 60.5 bits (145), Expect = 3e-07
 Identities = 27/35 (77%), Positives = 31/35 (88%)
 Frame = +3

Query: 426 QKIIMKIEHFRIEDLKQILNILQKHFIIDLPKNKF 530
           QK +MKIEHFR+ED KQIL IL+KHF +DLPKNKF
Sbjct: 303 QKDLMKIEHFRVEDGKQILGILEKHFAVDLPKNKF 337


>ref|YP_008993380.1| RNA polymerase alpha subunit (chloroplast) [Magnolia pyramidata]
          Length = 337

 Score = 60.1 bits (144), Expect = 4e-07
 Identities = 27/35 (77%), Positives = 33/35 (94%)
 Frame = +3

Query: 426 QKIIMKIEHFRIEDLKQILNILQKHFIIDLPKNKF 530
           Q+ +M+IEHFRIED+KQIL+ILQKHF I+LPKNKF
Sbjct: 303 QEDLMRIEHFRIEDVKQILDILQKHFTINLPKNKF 337