BLASTX nr result

ID: Sinomenium22_contig00042926 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium22_contig00042926
         (496 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EXC14470.1| RING-H2 zinc finger protein RHA4a [Morus notabilis]     74   3e-11
ref|XP_002518854.1| ring finger protein, putative [Ricinus commu...    72   6e-11
ref|XP_007019708.1| RING/U-box superfamily protein, putative [Th...    66   4e-09
ref|XP_004300501.1| PREDICTED: RING-H2 zinc finger protein RHA4a...    60   3e-07
ref|XP_006413486.1| hypothetical protein EUTSA_v10026391mg [Eutr...    59   5e-07
ref|XP_003530445.1| PREDICTED: RING-H2 zinc finger protein RHA4a...    57   3e-06
ref|XP_003524431.1| PREDICTED: RING-H2 zinc finger protein RHA4a...    57   3e-06

>gb|EXC14470.1| RING-H2 zinc finger protein RHA4a [Morus notabilis]
          Length = 218

 Score = 73.6 bits (179), Expect = 3e-11
 Identities = 47/113 (41%), Positives = 55/113 (48%), Gaps = 3/113 (2%)
 Frame = -1

Query: 331 MGLPPSESPSHLFSQAIQLKLYQAXXXXXXXXXXXXXXXXXXXXXLKRRRXXXXXXXXXX 152
           MG+P S +P HL+ QA+QLKLYQA                     LKRR           
Sbjct: 1   MGVPQSPTPPHLYPQALQLKLYQAFIFSIPILFSIILFLLFYLFYLKRRASNSTSISFPP 60

Query: 151 XXXXXXALPTPP---DPLPFEVCLKEELKDNLPIIMFDEALRARDSQCCVCLG 2
                 +  T      P  F+  LK ELKD LPI++FDE LR RDSQCCVCLG
Sbjct: 61  LPRPRRSHQTTTYVSSPCQFD--LKVELKDELPIVLFDEELRKRDSQCCVCLG 111


>ref|XP_002518854.1| ring finger protein, putative [Ricinus communis]
           gi|223541841|gb|EEF43387.1| ring finger protein,
           putative [Ricinus communis]
          Length = 265

 Score = 72.4 bits (176), Expect = 6e-11
 Identities = 46/117 (39%), Positives = 59/117 (50%), Gaps = 7/117 (5%)
 Frame = -1

Query: 331 MGLPPSESPS-HLFSQAIQLKLYQAXXXXXXXXXXXXXXXXXXXXXLKRRRXXXXXXXXX 155
           MG PP+ SP+ HL+ QA+QLKLYQA                     LKRR          
Sbjct: 1   MGFPPTSSPNAHLYPQALQLKLYQAFIFSIPILFSIILFLLFYLFYLKRRATSLSSPSQV 60

Query: 154 XXXXXXXALPTPPD------PLPFEVCLKEELKDNLPIIMFDEALRARDSQCCVCLG 2
                   LPT  +      P   ++ LK+E+KD LPI++FDE L+ R+SQCCVCLG
Sbjct: 61  --------LPTSSNQAAQQLPSVCQIGLKKEIKDKLPIVLFDEDLKTRESQCCVCLG 109


>ref|XP_007019708.1| RING/U-box superfamily protein, putative [Theobroma cacao]
           gi|508725036|gb|EOY16933.1| RING/U-box superfamily
           protein, putative [Theobroma cacao]
          Length = 215

 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 42/112 (37%), Positives = 52/112 (46%), Gaps = 2/112 (1%)
 Frame = -1

Query: 331 MGLP--PSESPSHLFSQAIQLKLYQAXXXXXXXXXXXXXXXXXXXXXLKRRRXXXXXXXX 158
           MGLP  PS +P HL+ QA+QLKLYQA                      +R          
Sbjct: 1   MGLPHTPSPTPPHLYPQALQLKLYQAFIFSIPILFSVILFLLFTVYLKRRASTPSYPRPL 60

Query: 157 XXXXXXXXALPTPPDPLPFEVCLKEELKDNLPIIMFDEALRARDSQCCVCLG 2
                      TP  P P ++ LK+EL D LP ++FDE L  RDS+C VCLG
Sbjct: 61  IPTTFNQ---ATPYLPSPCQLSLKKELTDKLPTVLFDEELSTRDSKCSVCLG 109


>ref|XP_004300501.1| PREDICTED: RING-H2 zinc finger protein RHA4a-like [Fragaria vesca
           subsp. vesca]
          Length = 270

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 40/106 (37%), Positives = 46/106 (43%), Gaps = 3/106 (2%)
 Frame = -1

Query: 310 SPSHLFSQAIQLKLYQAXXXXXXXXXXXXXXXXXXXXXLKRRRXXXXXXXXXXXXXXXXA 131
           S SHL+ QA+QLKLYQA                     LKRR                  
Sbjct: 16  SQSHLYPQALQLKLYQAFIFSIPILFSIILFLLFYLFYLKRRASTLQSSPPILIRRRSPN 75

Query: 130 LPTPPDPLPFEVC---LKEELKDNLPIIMFDEALRARDSQCCVCLG 2
             + P       C   LK ELK+ L II+FDE L  +DSQCCVCLG
Sbjct: 76  QASAPSQYVSSPCPMDLKGELKEKLQIILFDEELMKKDSQCCVCLG 121


>ref|XP_006413486.1| hypothetical protein EUTSA_v10026391mg [Eutrema salsugineum]
           gi|557114656|gb|ESQ54939.1| hypothetical protein
           EUTSA_v10026391mg [Eutrema salsugineum]
          Length = 173

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 38/107 (35%), Positives = 47/107 (43%)
 Frame = -1

Query: 322 PPSESPSHLFSQAIQLKLYQAXXXXXXXXXXXXXXXXXXXXXLKRRRXXXXXXXXXXXXX 143
           P S  P HL+ QAIQLKLYQA                     LKRR              
Sbjct: 4   PQSPIPPHLYPQAIQLKLYQAFIFSIPILFSIILFLLFYLFYLKRRASSLSSHSPMILPV 63

Query: 142 XXXALPTPPDPLPFEVCLKEELKDNLPIIMFDEALRARDSQCCVCLG 2
                P+   P    + +K ELKD L +++F++ L  RDS CCVCLG
Sbjct: 64  SSTHQPSSHLPSVCLLDVKVELKDKLHVVLFNDELGTRDSLCCVCLG 110


>ref|XP_003530445.1| PREDICTED: RING-H2 zinc finger protein RHA4a-like [Glycine max]
          Length = 209

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 42/113 (37%), Positives = 47/113 (41%), Gaps = 3/113 (2%)
 Frame = -1

Query: 331 MGLPPSESPS-HLFSQAIQLKLYQAXXXXXXXXXXXXXXXXXXXXXLKRRRXXXXXXXXX 155
           MG+P    PS HL+ Q IQLKLYQA                     LKRR          
Sbjct: 1   MGVPQPPPPSQHLYPQEIQLKLYQAFIFSIPILFSIILVLLFYLFYLKRRASSLSSPPLH 60

Query: 154 XXXXXXXALPT--PPDPLPFEVCLKEELKDNLPIIMFDEALRARDSQCCVCLG 2
                     T  P    P  + L  +  D LP I+FDE LR RDS CCVCLG
Sbjct: 61  ILPSTSTDPQTAYPYSTQPCRLDLTVQFLDKLPRILFDEDLRTRDSVCCVCLG 113


>ref|XP_003524431.1| PREDICTED: RING-H2 zinc finger protein RHA4a-like [Glycine max]
          Length = 206

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 42/112 (37%), Positives = 48/112 (42%), Gaps = 2/112 (1%)
 Frame = -1

Query: 331 MGLPPSESPS-HLFSQAIQLKLYQAXXXXXXXXXXXXXXXXXXXXXLKRRRXXXXXXXXX 155
           MG+P    PS HL+ Q IQLKLYQA                     LKRR          
Sbjct: 1   MGVPQPPPPSQHLYPQEIQLKLYQAFIFSIPILFSIILVLLFYLFYLKRRASSLSSPPLH 60

Query: 154 XXXXXXXALPTPPDPL-PFEVCLKEELKDNLPIIMFDEALRARDSQCCVCLG 2
                  +  T P P  P  + L  +  D LP I+FDE LR  DS CCVCLG
Sbjct: 61  ILPSTTNSQTTYPYPSQPCRLDLAVQFLDKLPRILFDEDLRTGDSVCCVCLG 112