BLASTX nr result

ID: Sinomenium22_contig00042779 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium22_contig00042779
         (481 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN77561.1| hypothetical protein VITISV_026449 [Vitis vinifera]    62   8e-08
ref|XP_002272603.2| PREDICTED: pentatricopeptide repeat-containi...    62   1e-07

>emb|CAN77561.1| hypothetical protein VITISV_026449 [Vitis vinifera]
          Length = 741

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 44/135 (32%), Positives = 63/135 (46%), Gaps = 7/135 (5%)
 Frame = +1

Query: 1   KPPGVKKLYHHLVYWS----LYCSSSEG-SNYLDIRNLKFGHNEKFNGIHNMCNFLFSEL 165
           K P +K LY+ L + S    + CSS +  SNY  +   K      F  IHN+C+ +F+EL
Sbjct: 44  KLPRLKSLYYLLTHLSVNIPICCSSDDAASNYWSMNGFKI----TFTTIHNLCSTMFNEL 99

Query: 166 SCRFERLYSALFFVPEDM--TNLPSDMWGPQPEFTXXXXXXXXXXXXXXXXXXXXMEKCE 339
             RF+ L     F   D+  ++L SDMWG   E T                     +KC 
Sbjct: 100 CKRFKDLSDV--FARRDLGESSLHSDMWGTXKELTLLLRCCIVSLNLLGSDQSLLFQKCR 157

Query: 340 ILLSILGKLCSPDLT 384
           +LL+IL + CS  L+
Sbjct: 158 VLLTILSRFCSQGLS 172


>ref|XP_002272603.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g55840-like [Vitis vinifera]
          Length = 2037

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 44/135 (32%), Positives = 63/135 (46%), Gaps = 7/135 (5%)
 Frame = +1

Query: 1   KPPGVKKLYHHLVYWS----LYCSSSEG-SNYLDIRNLKFGHNEKFNGIHNMCNFLFSEL 165
           K P +K LY+ L + S    + CSS +  SNY  +   K      F  IHN+C+ +F+EL
Sbjct: 44  KLPRLKSLYYLLTHLSVNIPICCSSDDAASNYWSMNGFKI----TFTTIHNLCSTMFNEL 99

Query: 166 SCRFERLYSALFFVPEDM--TNLPSDMWGPQPEFTXXXXXXXXXXXXXXXXXXXXMEKCE 339
             RF+ L     F   D+  ++L SDMWG   E T                     +KC 
Sbjct: 100 CKRFKDLSDV--FARRDLGESSLHSDMWGTVKELTLLLRCCIVSLNLLGSDQSLLFQKCR 157

Query: 340 ILLSILGKLCSPDLT 384
           +LL+IL + CS  L+
Sbjct: 158 VLLTILSRFCSQGLS 172


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