BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium22_contig00042763
         (687 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280792.1| PREDICTED: pentatricopeptide repeat-containi...   223   6e-56
ref|XP_007226881.1| hypothetical protein PRUPE_ppa016715mg, part...   213   6e-53
ref|NP_178260.1| pentatricopeptide repeat-containing protein [Ar...   192   1e-46
ref|XP_006398544.1| hypothetical protein EUTSA_v10001115mg [Eutr...   189   6e-46
ref|XP_004298471.1| PREDICTED: pentatricopeptide repeat-containi...   188   1e-45
ref|XP_006290812.1| hypothetical protein CARUB_v10016917mg [Caps...   187   2e-45
ref|XP_002876755.1| pentatricopeptide repeat-containing protein ...   185   1e-44
ref|XP_006826862.1| hypothetical protein AMTR_s00010p00121230, p...   158   1e-36
ref|XP_006407296.1| hypothetical protein EUTSA_v10020185mg [Eutr...   143   6e-32
ref|NP_187883.2| mitochondrial editing factor 22 [Arabidopsis th...   140   4e-31
dbj|BAD94552.1| hypothetical protein [Arabidopsis thaliana]           140   4e-31
ref|XP_002884925.1| predicted protein [Arabidopsis lyrata subsp....   137   3e-30
ref|XP_006299513.1| hypothetical protein CARUB_v10015683mg [Caps...   136   6e-30
ref|XP_006299486.1| hypothetical protein CARUB_v10015651mg [Caps...   134   2e-29
ref|XP_002884209.1| pentatricopeptide repeat-containing protein ...   131   2e-28
ref|XP_004304934.1| PREDICTED: pentatricopeptide repeat-containi...   130   3e-28
ref|XP_006339048.1| PREDICTED: pentatricopeptide repeat-containi...   130   5e-28
ref|XP_003551818.1| PREDICTED: pentatricopeptide repeat-containi...   130   5e-28
ref|XP_002265522.1| PREDICTED: putative pentatricopeptide repeat...   129   7e-28
ref|XP_002276196.1| PREDICTED: pentatricopeptide repeat-containi...   129   9e-28

>ref|XP_002280792.1| PREDICTED: pentatricopeptide repeat-containing protein At2g01510,
           mitochondrial [Vitis vinifera]
           gi|297737690|emb|CBI26891.3| unnamed protein product
           [Vitis vinifera]
          Length = 610

 Score =  223 bits (567), Expect = 6e-56
 Identities = 114/197 (57%), Positives = 139/197 (70%), Gaps = 1/197 (0%)
 Frame = +1

Query: 97  YSALSVTH-FGTNNSLSSQKQSFASLLHCCSSHPNQLKQIHALLLTTGLSIKNXXXXXXX 273
           +S+L   H   T  SL   KQ+  +LL  CSSHP+ LKQ+HALLLTTGLSIKN       
Sbjct: 17  FSSLLHAHGSSTGQSLPITKQALTTLLQSCSSHPSLLKQLHALLLTTGLSIKNALITQLL 76

Query: 274 XXXXXXGDMAYARRLFDEMHKPRSFLWNTLIKGYVKNELFHDAVALYGQMHRISVRPDQF 453
                 GDM+YAR+LFDEMHKPR FLWNT++KGYVKN +   AV++YG+M  + VRPD F
Sbjct: 77  TSLTLLGDMSYARQLFDEMHKPRPFLWNTIMKGYVKNGIPDKAVSVYGKMRHLGVRPDPF 136

Query: 454 TFPFVLKGCAGLVDQSCGAEVHAHVVKSGVDFDAIVRTELMIMYAKFEDLDSADYLFESM 633
           TFPFV+K CA L +   G  +H HVVK G++F A VRTELMIMY KF +L  A++LF SM
Sbjct: 137 TFPFVIKACAELAELWAGLGMHGHVVKHGLEFVAAVRTELMIMYVKFGELGCAEFLFGSM 196

Query: 634 HERDLVAWNALMSVYTQ 684
            ERDLVAWNAL++V  Q
Sbjct: 197 VERDLVAWNALIAVCVQ 213



 Score = 66.2 bits (160), Expect = 9e-09
 Identities = 37/132 (28%), Positives = 62/132 (46%)
 Frame = +1

Query: 292 GDMAYARRLFDEMHKPRSFLWNTLIKGYVKNELFHDAVALYGQMHRISVRPDQFTFPFVL 471
           G++  A  LF  M +     WN LI   V+      A+  + +M    ++PD  T    L
Sbjct: 184 GELGCAEFLFGSMVERDLVAWNALIAVCVQTGFSSKALQSFREMGMAGIKPDSVTIVSAL 243

Query: 472 KGCAGLVDQSCGAEVHAHVVKSGVDFDAIVRTELMIMYAKFEDLDSADYLFESMHERDLV 651
             C  L     G E++    + G+D + IV    + M AK  D+D A  LF+ M +R+++
Sbjct: 244 SACGHLGCLETGEEIYEFAREEGIDSNIIVHNARLDMCAKCGDMDKAMNLFDEMPQRNVI 303

Query: 652 AWNALMSVYTQN 687
           +W+ ++  Y  N
Sbjct: 304 SWSTVIGGYAVN 315


>ref|XP_007226881.1| hypothetical protein PRUPE_ppa016715mg, partial [Prunus persica]
           gi|462423817|gb|EMJ28080.1| hypothetical protein
           PRUPE_ppa016715mg, partial [Prunus persica]
          Length = 574

 Score =  213 bits (541), Expect = 6e-53
 Identities = 105/178 (58%), Positives = 131/178 (73%)
 Frame = +1

Query: 154 QSFASLLHCCSSHPNQLKQIHALLLTTGLSIKNXXXXXXXXXXXXXGDMAYARRLFDEMH 333
           Q F +LL  CSS+PN LKQIHAL+LTTGLSIKN              DM+YAR+LFD+MH
Sbjct: 1   QVFTTLLQSCSSYPNHLKQIHALILTTGLSIKNSLTTQLLTNLTLLRDMSYARQLFDQMH 60

Query: 334 KPRSFLWNTLIKGYVKNELFHDAVALYGQMHRISVRPDQFTFPFVLKGCAGLVDQSCGAE 513
           KPR FLWNTLIK YVKN +F +A  +Y QMH + VRPDQFT+ FV+K CA L +   G+ 
Sbjct: 61  KPRVFLWNTLIKAYVKNGIFTEAAFVYRQMHLLGVRPDQFTYTFVVKACAELPELWAGSA 120

Query: 514 VHAHVVKSGVDFDAIVRTELMIMYAKFEDLDSADYLFESMHERDLVAWNALMSVYTQN 687
           V AHVVK G++F A+VRTEL++M+AKF +L  AD+LFE+M ERDL+AWNA ++   QN
Sbjct: 121 VLAHVVKYGLEFVAMVRTELILMFAKFGELGMADFLFETMVERDLIAWNAFIAACVQN 178



 Score = 63.2 bits (152), Expect = 8e-08
 Identities = 37/132 (28%), Positives = 64/132 (48%)
 Frame = +1

Query: 292 GDMAYARRLFDEMHKPRSFLWNTLIKGYVKNELFHDAVALYGQMHRISVRPDQFTFPFVL 471
           G++  A  LF+ M +     WN  I   V+N     A+AL+ QM    ++ D  +     
Sbjct: 148 GELGMADFLFETMVERDLIAWNAFIAACVQNGNAGKALALFRQMDVAGIKHDAVSVVSAF 207

Query: 472 KGCAGLVDQSCGAEVHAHVVKSGVDFDAIVRTELMIMYAKFEDLDSADYLFESMHERDLV 651
             C  L     G E++  + K G+  + IV    + MY K   +D A+ LFE M +R+++
Sbjct: 208 SACGQLGCLENGQEIYGIMRKYGIVCNIIVANAQLDMYVKCGSIDMAEALFEDMPQRNVI 267

Query: 652 AWNALMSVYTQN 687
           +W+ ++  Y+ N
Sbjct: 268 SWSTMIIGYSIN 279


>ref|NP_178260.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75216969|sp|Q9ZVF4.1|PP140_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At2g01510, mitochondrial; Flags: Precursor
           gi|3785980|gb|AAC67327.1| hypothetical protein
           [Arabidopsis thaliana] gi|330250369|gb|AEC05463.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 584

 Score =  192 bits (487), Expect = 1e-46
 Identities = 96/178 (53%), Positives = 122/178 (68%)
 Frame = +1

Query: 151 KQSFASLLHCCSSHPNQLKQIHALLLTTGLSIKNXXXXXXXXXXXXXGDMAYARRLFDEM 330
           KQ  + LL   SS P QLK+IHA++L TG S KN             GDM YAR++FDEM
Sbjct: 10  KQMLSELLRASSSKPKQLKKIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFDEM 69

Query: 331 HKPRSFLWNTLIKGYVKNELFHDAVALYGQMHRISVRPDQFTFPFVLKGCAGLVDQSCGA 510
           HKPR FLWNTL KGYV+N+L  +++ LY +M  + VRPD+FT+PFV+K  + L D SCG 
Sbjct: 70  HKPRIFLWNTLFKGYVRNQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGF 129

Query: 511 EVHAHVVKSGVDFDAIVRTELMIMYAKFEDLDSADYLFESMHERDLVAWNALMSVYTQ 684
            +HAHVVK G     IV TEL++MY KF +L SA++LFESM  +DLVAWNA ++V  Q
Sbjct: 130 ALHAHVVKYGFGCLGIVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQ 187



 Score = 60.1 bits (144), Expect = 7e-07
 Identities = 35/132 (26%), Positives = 63/132 (47%)
 Frame = +1

Query: 292 GDMAYARRLFDEMHKPRSFLWNTLIKGYVKNELFHDAVALYGQMHRISVRPDQFTFPFVL 471
           G+++ A  LF+ M       WN  +   V+      A+  + +M   +V+ D FT   +L
Sbjct: 158 GELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCADAVQFDSFTVVSML 217

Query: 472 KGCAGLVDQSCGAEVHAHVVKSGVDFDAIVRTELMIMYAKFEDLDSADYLFESMHERDLV 651
             C  L     G E++    K  +D + IV    + M+ K  + ++A  LFE M +R++V
Sbjct: 218 SACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAARVLFEEMKQRNVV 277

Query: 652 AWNALMSVYTQN 687
           +W+ ++  Y  N
Sbjct: 278 SWSTMIVGYAMN 289


>ref|XP_006398544.1| hypothetical protein EUTSA_v10001115mg [Eutrema salsugineum]
           gi|557099633|gb|ESQ39997.1| hypothetical protein
           EUTSA_v10001115mg [Eutrema salsugineum]
          Length = 584

 Score =  189 bits (481), Expect = 6e-46
 Identities = 95/178 (53%), Positives = 120/178 (67%)
 Frame = +1

Query: 151 KQSFASLLHCCSSHPNQLKQIHALLLTTGLSIKNXXXXXXXXXXXXXGDMAYARRLFDEM 330
           KQ  + LL   SS P Q K+IHAL+LT+GLS+KN             GDM YAR++FDEM
Sbjct: 10  KQMLSKLLRASSSKPKQFKKIHALVLTSGLSVKNSLLTQLLEKLILVGDMCYARQMFDEM 69

Query: 331 HKPRSFLWNTLIKGYVKNELFHDAVALYGQMHRISVRPDQFTFPFVLKGCAGLVDQSCGA 510
           HKPR FLWNTL KGYVKN+L  ++V LY  M  + VRPD+FT+PFV+K  + L    CG 
Sbjct: 70  HKPRIFLWNTLFKGYVKNQLPLESVMLYKNMRDLDVRPDEFTYPFVVKAISQLGVLPCGF 129

Query: 511 EVHAHVVKSGVDFDAIVRTELMIMYAKFEDLDSADYLFESMHERDLVAWNALMSVYTQ 684
             HAHV+K G +   IV TEL++MY KF +L SA++LFESM  +DLVAWNA ++   Q
Sbjct: 130 AFHAHVLKYGFETLGIVATELVMMYMKFGELSSAEFLFESMQGKDLVAWNAFIAACVQ 187



 Score = 65.1 bits (157), Expect = 2e-08
 Identities = 41/158 (25%), Positives = 67/158 (42%)
 Frame = +1

Query: 214 HALLLTTGLSIKNXXXXXXXXXXXXXGDMAYARRLFDEMHKPRSFLWNTLIKGYVKNELF 393
           HA +L  G                  G+++ A  LF+ M       WN  I   V+    
Sbjct: 132 HAHVLKYGFETLGIVATELVMMYMKFGELSSAEFLFESMQGKDLVAWNAFIAACVQTGNS 191

Query: 394 HDAVALYGQMHRISVRPDQFTFPFVLKGCAGLVDQSCGAEVHAHVVKSGVDFDAIVRTEL 573
             A+  Y +M   +V+ D FT   VL  C  L     G +++    K  +D + IV    
Sbjct: 192 AIALEYYHKMCEDAVQFDSFTVVSVLSACGQLGSLEIGKQIYDRARKEDIDCNIIVENAK 251

Query: 574 MIMYAKFEDLDSADYLFESMHERDLVAWNALMSVYTQN 687
           + MY K    ++A  LF+ M +R++V+W+ ++  Y  N
Sbjct: 252 LDMYLKCGSTEAARVLFDEMRQRNIVSWSTMIVGYAMN 289


>ref|XP_004298471.1| PREDICTED: pentatricopeptide repeat-containing protein At2g01510,
           mitochondrial-like [Fragaria vesca subsp. vesca]
          Length = 614

 Score =  188 bits (478), Expect = 1e-45
 Identities = 93/179 (51%), Positives = 127/179 (70%)
 Frame = +1

Query: 151 KQSFASLLHCCSSHPNQLKQIHALLLTTGLSIKNXXXXXXXXXXXXXGDMAYARRLFDEM 330
           KQ+F + L  CSSHP+QLKQ+HA++LTTG+S+KN             G+ +YAR++FDEM
Sbjct: 41  KQAFTAQLESCSSHPDQLKQLHAVILTTGISVKNSLLTRLITSFIALGETSYARKVFDEM 100

Query: 331 HKPRSFLWNTLIKGYVKNELFHDAVALYGQMHRISVRPDQFTFPFVLKGCAGLVDQSCGA 510
           HKPR FLWNT+IK YVK+  F +A A+Y +MHR+ VRPD+FT+ FV+K CA L+  + G 
Sbjct: 101 HKPRVFLWNTMIKAYVKDGDFIEAAAVYRRMHRLGVRPDEFTYTFVVKACAQLLPWA-GL 159

Query: 511 EVHAHVVKSGVDFDAIVRTELMIMYAKFEDLDSADYLFESMHERDLVAWNALMSVYTQN 687
            V AH VK G++F A VRTE+++M  +  +L  A +LF SM ERDLVAWNA ++   Q+
Sbjct: 160 AVAAHAVKYGLEFVAEVRTEMVVMCVRNRELGLARFLFGSMVERDLVAWNAFVAACVQS 218



 Score = 60.5 bits (145), Expect = 5e-07
 Identities = 34/131 (25%), Positives = 61/131 (46%)
 Frame = +1

Query: 295 DMAYARRLFDEMHKPRSFLWNTLIKGYVKNELFHDAVALYGQMHRISVRPDQFTFPFVLK 474
           ++  AR LF  M +     WN  +   V++    +A+ L+ +M    V+ D  T      
Sbjct: 189 ELGLARFLFGSMVERDLVAWNAFVAACVQSGHAAEALDLFRRMRVAGVKLDAVTIVSAFS 248

Query: 475 GCAGLVDQSCGAEVHAHVVKSGVDFDAIVRTELMIMYAKFEDLDSADYLFESMHERDLVA 654
            C  L     G E++  + + G+  + IV    + MY K   +D A+ LFE M  R++++
Sbjct: 249 ACGQLGCLETGEEIYGIMRQCGIGCNVIVANARLDMYVKCGSVDMAEALFEDMSRRNVIS 308

Query: 655 WNALMSVYTQN 687
           W+ ++  Y  N
Sbjct: 309 WSTMVLGYAMN 319


>ref|XP_006290812.1| hypothetical protein CARUB_v10016917mg [Capsella rubella]
           gi|482559519|gb|EOA23710.1| hypothetical protein
           CARUB_v10016917mg [Capsella rubella]
          Length = 584

 Score =  187 bits (476), Expect = 2e-45
 Identities = 94/178 (52%), Positives = 121/178 (67%)
 Frame = +1

Query: 151 KQSFASLLHCCSSHPNQLKQIHALLLTTGLSIKNXXXXXXXXXXXXXGDMAYARRLFDEM 330
           KQ  + LL   SS PNQLK+IHA++L TG S KN             GDM YAR+LFDEM
Sbjct: 10  KQMLSELLRASSSKPNQLKKIHAIVLRTGFSEKNSLLTQLLENLVLLGDMCYARQLFDEM 69

Query: 331 HKPRSFLWNTLIKGYVKNELFHDAVALYGQMHRISVRPDQFTFPFVLKGCAGLVDQSCGA 510
           HKPR FLWN+L KGYVKN L  ++V LY +M  + VRPD+FT+PFV+K  + L    CG+
Sbjct: 70  HKPRIFLWNSLFKGYVKNHLPFESVLLYKKMRDLGVRPDEFTYPFVVKAISQLGFFPCGS 129

Query: 511 EVHAHVVKSGVDFDAIVRTELMIMYAKFEDLDSADYLFESMHERDLVAWNALMSVYTQ 684
            +HAHV+K+G +   IV TEL++MY KF +L SA+ LFESM  +D+VAWNA ++   Q
Sbjct: 130 ALHAHVLKNGFECLGIVATELVMMYMKFGELSSAELLFESMQVKDVVAWNAFIAACVQ 187



 Score = 64.7 bits (156), Expect = 3e-08
 Identities = 40/159 (25%), Positives = 69/159 (43%)
 Frame = +1

Query: 211 IHALLLTTGLSIKNXXXXXXXXXXXXXGDMAYARRLFDEMHKPRSFLWNTLIKGYVKNEL 390
           +HA +L  G                  G+++ A  LF+ M       WN  I   V+   
Sbjct: 131 LHAHVLKNGFECLGIVATELVMMYMKFGELSSAELLFESMQVKDVVAWNAFIAACVQTGN 190

Query: 391 FHDAVALYGQMHRISVRPDQFTFPFVLKGCAGLVDQSCGAEVHAHVVKSGVDFDAIVRTE 570
              A+  Y +M   +V+ D FT   +L  C  L     G E++    K  +D + IV   
Sbjct: 191 SAIALEYYHKMCAAAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENA 250

Query: 571 LMIMYAKFEDLDSADYLFESMHERDLVAWNALMSVYTQN 687
            + M+ K  + ++A  LF+ M +R++V+W+ ++  Y  N
Sbjct: 251 RLDMHLKCGNTEAARVLFDEMKQRNVVSWSTMIVGYAMN 289


>ref|XP_002876755.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297322593|gb|EFH53014.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 597

 Score =  185 bits (469), Expect = 1e-44
 Identities = 92/178 (51%), Positives = 121/178 (67%)
 Frame = +1

Query: 151 KQSFASLLHCCSSHPNQLKQIHALLLTTGLSIKNXXXXXXXXXXXXXGDMAYARRLFDEM 330
           KQ  + LL   SS P QLK+IHA+++ TG S KN             GDM YAR++FDEM
Sbjct: 10  KQMLSELLRASSSKPKQLKKIHAVVIRTGFSEKNSLLTQLLENLVLVGDMCYARQVFDEM 69

Query: 331 HKPRSFLWNTLIKGYVKNELFHDAVALYGQMHRISVRPDQFTFPFVLKGCAGLVDQSCGA 510
            KPR FLWNTL KGYV+N+L  ++V LY +M  + VRPD+FT+PFV+K  + L    CG 
Sbjct: 70  PKPRIFLWNTLFKGYVRNQLPFESVLLYKKMRDLGVRPDEFTYPFVVKAISQLGVLPCGV 129

Query: 511 EVHAHVVKSGVDFDAIVRTELMIMYAKFEDLDSADYLFESMHERDLVAWNALMSVYTQ 684
            +HAHV+K+G +   IV TEL++MY KF +L SA++LFESM  +DLVAWNA ++V  Q
Sbjct: 130 SLHAHVLKNGFECLGIVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFIAVCVQ 187



 Score = 59.7 bits (143), Expect = 9e-07
 Identities = 38/159 (23%), Positives = 68/159 (42%)
 Frame = +1

Query: 211 IHALLLTTGLSIKNXXXXXXXXXXXXXGDMAYARRLFDEMHKPRSFLWNTLIKGYVKNEL 390
           +HA +L  G                  G+++ A  LF+ M       WN  I   V+   
Sbjct: 131 LHAHVLKNGFECLGIVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFIAVCVQTGN 190

Query: 391 FHDAVALYGQMHRISVRPDQFTFPFVLKGCAGLVDQSCGAEVHAHVVKSGVDFDAIVRTE 570
              A+  + +M   +V+ D FT   +L  C  L     G E++    K  ++ + IV   
Sbjct: 191 SAIALEYFNKMCADAVQFDSFTVVSMLSACGQLGSLDIGEEIYDRARKEEIECNIIVENA 250

Query: 571 LMIMYAKFEDLDSADYLFESMHERDLVAWNALMSVYTQN 687
            + M+ K    ++A  LF+ M +R++V+W+ ++  Y  N
Sbjct: 251 RLDMHLKCGSTEAARVLFDDMKQRNVVSWSTMIVGYAMN 289


>ref|XP_006826862.1| hypothetical protein AMTR_s00010p00121230, partial [Amborella
           trichopoda] gi|548831291|gb|ERM94099.1| hypothetical
           protein AMTR_s00010p00121230, partial [Amborella
           trichopoda]
          Length = 135

 Score =  158 bits (400), Expect = 1e-36
 Identities = 73/130 (56%), Positives = 97/130 (74%)
 Frame = +1

Query: 298 MAYARRLFDEMHKPRSFLWNTLIKGYVKNELFHDAVALYGQMHRISVRPDQFTFPFVLKG 477
           M YA  LF +MHKPR F+WNTLI+ Y K  LF  A++LY QMH  +VRPD+FTFPFVLK 
Sbjct: 1   MDYAHLLFQQMHKPRPFIWNTLIRSYYKTHLFSHALSLYDQMHVSNVRPDEFTFPFVLKA 60

Query: 478 CAGLVDQSCGAEVHAHVVKSGVDFDAIVRTELMIMYAKFEDLDSADYLFESMHERDLVAW 657
           CAGL+ Q  G++VHA ++K G D + IV+TEL+IMY +F +LD A+ +FE + +RDL++W
Sbjct: 61  CAGLIAQREGSQVHALIIKYGFDSEDIVQTELIIMYVRFGELDFAERMFERIPKRDLISW 120

Query: 658 NALMSVYTQN 687
           NAL+    QN
Sbjct: 121 NALIGALAQN 130


>ref|XP_006407296.1| hypothetical protein EUTSA_v10020185mg [Eutrema salsugineum]
           gi|557108442|gb|ESQ48749.1| hypothetical protein
           EUTSA_v10020185mg [Eutrema salsugineum]
          Length = 694

 Score =  143 bits (360), Expect = 6e-32
 Identities = 76/198 (38%), Positives = 112/198 (56%), Gaps = 2/198 (1%)
 Frame = +1

Query: 100 SALSVTHFGTNNSLSSQKQSFASLLHCCSSHPNQLKQIHALLLTTGLSIKNXXXXXXXXX 279
           S L+     +N+ + S   SF + L   S+H +QL+QIHA LL  GL             
Sbjct: 5   SLLASPFLHSNSGIHSD--SFYAALIDGSTHKSQLRQIHARLLVLGLQFSGFLITKLIHA 62

Query: 280 XXXXGDMAYARRLFDEMHKPRSFLWNTLIKGYVKNELFHDAVALYGQMHRISVRPDQFTF 459
               GD+ +AR++FD++ +P+ F WN +I+GY +N LF DA+ +Y +M    V PD FTF
Sbjct: 63  SSSFGDICFARQVFDDLPRPQIFPWNAIIRGYSRNNLFQDALLMYSKMQLARVSPDSFTF 122

Query: 460 PFVLKGCAGLVDQSCGAEVHAHVVKSGVDFDAIVRTELMIMYAKFEDLDSADYLFES--M 633
           P +LK C+GL +   G  VHAHV + G + D  V+  L+ +YAK   +  A  +F    +
Sbjct: 123 PHLLKACSGLPNLQMGRLVHAHVFRLGFEADVFVQNGLIALYAKCRRMGQAKTVFAGLPL 182

Query: 634 HERDLVAWNALMSVYTQN 687
            ER +V+W AL+S Y QN
Sbjct: 183 QERTIVSWTALISAYAQN 200



 Score = 79.0 bits (193), Expect = 1e-12
 Identities = 44/166 (26%), Positives = 77/166 (46%)
 Frame = +1

Query: 181 CSSHPNQLKQIHALLLTTGLSIKNXXXXXXXXXXXXXGDMAYARRLFDEMHKPRSFLWNT 360
           C     Q + IHA ++  GL  +              G +A A+ LFD+M  P   LWN 
Sbjct: 234 CLQDLEQGRSIHASVVKMGLETEPDLLISLNTMYAKCGRVATAKILFDKMKSPNLILWNA 293

Query: 361 LIKGYVKNELFHDAVALYGQMHRISVRPDQFTFPFVLKGCAGLVDQSCGAEVHAHVVKSG 540
           +I GY KN    DA+ ++ +M    V PD  +    +  CA +        +  +V +S 
Sbjct: 294 MISGYAKNGYAKDAIDMFHEMINEGVTPDTISITSAISACAQVGSLEQARWMDEYVSRSN 353

Query: 541 VDFDAIVRTELMIMYAKFEDLDSADYLFESMHERDLVAWNALMSVY 678
           +  D  + + L+ M+ K   ++ A  +F+   ++D+V W+A++  Y
Sbjct: 354 LGDDVFISSALIDMFGKCGSVECARSVFDRTLDKDVVVWSAMIVGY 399



 Score = 76.3 bits (186), Expect = 9e-12
 Identities = 52/187 (27%), Positives = 82/187 (43%), Gaps = 4/187 (2%)
 Frame = +1

Query: 139 LSSQKQSFASLLHCCSSHPNQL--KQIHALLLTTGLSIKNXXXXXXXXXXXXXGDMAYAR 312
           +S    +F  LL  CS  PN    + +HA +   G                    M  A+
Sbjct: 115 VSPDSFTFPHLLKACSGLPNLQMGRLVHAHVFRLGFEADVFVQNGLIALYAKCRRMGQAK 174

Query: 313 RLFDEMHKPRSFL--WNTLIKGYVKNELFHDAVALYGQMHRISVRPDQFTFPFVLKGCAG 486
            +F  +      +  W  LI  Y +N    +A+ ++ QM ++ V+PD      VL     
Sbjct: 175 TVFAGLPLQERTIVSWTALISAYAQNGEPMEALGIFSQMRKMDVKPDWVALVSVLNAFTC 234

Query: 487 LVDQSCGAEVHAHVVKSGVDFDAIVRTELMIMYAKFEDLDSADYLFESMHERDLVAWNAL 666
           L D   G  +HA VVK G++ +  +   L  MYAK   + +A  LF+ M   +L+ WNA+
Sbjct: 235 LQDLEQGRSIHASVVKMGLETEPDLLISLNTMYAKCGRVATAKILFDKMKSPNLILWNAM 294

Query: 667 MSVYTQN 687
           +S Y +N
Sbjct: 295 ISGYAKN 301


>ref|NP_187883.2| mitochondrial editing factor 22 [Arabidopsis thaliana]
           gi|75274142|sp|Q9LTV8.1|PP224_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At3g12770 gi|11994419|dbj|BAB02421.1| selenium-binding
           protein-like [Arabidopsis thaliana]
           gi|332641723|gb|AEE75244.1| mitochondrial editing factor
           22 [Arabidopsis thaliana]
          Length = 694

 Score =  140 bits (353), Expect = 4e-31
 Identities = 76/189 (40%), Positives = 106/189 (56%), Gaps = 2/189 (1%)
 Frame = +1

Query: 127 TNNSLSSQKQSFASLLHCCSSHPNQLKQIHALLLTTGLSIKNXXXXXXXXXXXXXGDMAY 306
           TN+ + S   SF + L   ++H  QLKQIHA LL  GL                 GD+ +
Sbjct: 14  TNSGIHSD--SFYASLIDSATHKAQLKQIHARLLVLGLQFSGFLITKLIHASSSFGDITF 71

Query: 307 ARRLFDEMHKPRSFLWNTLIKGYVKNELFHDAVALYGQMHRISVRPDQFTFPFVLKGCAG 486
           AR++FD++ +P+ F WN +I+GY +N  F DA+ +Y  M    V PD FTFP +LK C+G
Sbjct: 72  ARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSG 131

Query: 487 LVDQSCGAEVHAHVVKSGVDFDAIVRTELMIMYAKFEDLDSADYLFES--MHERDLVAWN 660
           L     G  VHA V + G D D  V+  L+ +YAK   L SA  +FE   + ER +V+W 
Sbjct: 132 LSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWT 191

Query: 661 ALMSVYTQN 687
           A++S Y QN
Sbjct: 192 AIVSAYAQN 200



 Score = 86.7 bits (213), Expect = 7e-15
 Identities = 47/166 (28%), Positives = 80/166 (48%)
 Frame = +1

Query: 181 CSSHPNQLKQIHALLLTTGLSIKNXXXXXXXXXXXXXGDMAYARRLFDEMHKPRSFLWNT 360
           C     Q + IHA ++  GL I+              G +A A+ LFD+M  P   LWN 
Sbjct: 234 CLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNA 293

Query: 361 LIKGYVKNELFHDAVALYGQMHRISVRPDQFTFPFVLKGCAGLVDQSCGAEVHAHVVKSG 540
           +I GY KN    +A+ ++ +M    VRPD  +    +  CA +        ++ +V +S 
Sbjct: 294 MISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSD 353

Query: 541 VDFDAIVRTELMIMYAKFEDLDSADYLFESMHERDLVAWNALMSVY 678
              D  + + L+ M+AK   ++ A  +F+   +RD+V W+A++  Y
Sbjct: 354 YRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGY 399



 Score = 80.1 bits (196), Expect = 6e-13
 Identities = 51/187 (27%), Positives = 84/187 (44%), Gaps = 4/187 (2%)
 Frame = +1

Query: 139 LSSQKQSFASLLHCCS--SHPNQLKQIHALLLTTGLSIKNXXXXXXXXXXXXXGDMAYAR 312
           +S    +F  LL  CS  SH    + +HA +   G                    +  AR
Sbjct: 115 VSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSAR 174

Query: 313 RLFDEMHKPRSFL--WNTLIKGYVKNELFHDAVALYGQMHRISVRPDQFTFPFVLKGCAG 486
            +F+ +  P   +  W  ++  Y +N    +A+ ++ QM ++ V+PD      VL     
Sbjct: 175 TVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTC 234

Query: 487 LVDQSCGAEVHAHVVKSGVDFDAIVRTELMIMYAKFEDLDSADYLFESMHERDLVAWNAL 666
           L D   G  +HA VVK G++ +  +   L  MYAK   + +A  LF+ M   +L+ WNA+
Sbjct: 235 LQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAM 294

Query: 667 MSVYTQN 687
           +S Y +N
Sbjct: 295 ISGYAKN 301


>dbj|BAD94552.1| hypothetical protein [Arabidopsis thaliana]
          Length = 694

 Score =  140 bits (353), Expect = 4e-31
 Identities = 76/189 (40%), Positives = 106/189 (56%), Gaps = 2/189 (1%)
 Frame = +1

Query: 127 TNNSLSSQKQSFASLLHCCSSHPNQLKQIHALLLTTGLSIKNXXXXXXXXXXXXXGDMAY 306
           TN+ + S   SF + L   ++H  QLKQIHA LL  GL                 GD+ +
Sbjct: 14  TNSGIHSD--SFYASLIDSATHKAQLKQIHARLLVLGLQFSGFLITKLIHASSSFGDITF 71

Query: 307 ARRLFDEMHKPRSFLWNTLIKGYVKNELFHDAVALYGQMHRISVRPDQFTFPFVLKGCAG 486
           AR++FD++ +P+ F WN +I+GY +N  F DA+ +Y  M    V PD FTFP +LK C+G
Sbjct: 72  ARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSG 131

Query: 487 LVDQSCGAEVHAHVVKSGVDFDAIVRTELMIMYAKFEDLDSADYLFES--MHERDLVAWN 660
           L     G  VHA V + G D D  V+  L+ +YAK   L SA  +FE   + ER +V+W 
Sbjct: 132 LSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWT 191

Query: 661 ALMSVYTQN 687
           A++S Y QN
Sbjct: 192 AIVSAYAQN 200



 Score = 86.7 bits (213), Expect = 7e-15
 Identities = 47/166 (28%), Positives = 80/166 (48%)
 Frame = +1

Query: 181 CSSHPNQLKQIHALLLTTGLSIKNXXXXXXXXXXXXXGDMAYARRLFDEMHKPRSFLWNT 360
           C     Q + IHA ++  GL I+              G +A A+ LFD+M  P   LWN 
Sbjct: 234 CLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNA 293

Query: 361 LIKGYVKNELFHDAVALYGQMHRISVRPDQFTFPFVLKGCAGLVDQSCGAEVHAHVVKSG 540
           +I GY KN    +A+ ++ +M    VRPD  +    +  CA +        ++ +V +S 
Sbjct: 294 MISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSD 353

Query: 541 VDFDAIVRTELMIMYAKFEDLDSADYLFESMHERDLVAWNALMSVY 678
              D  + + L+ M+AK   ++ A  +F+   +RD+V W+A++  Y
Sbjct: 354 YRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGY 399



 Score = 78.2 bits (191), Expect = 2e-12
 Identities = 50/187 (26%), Positives = 83/187 (44%), Gaps = 4/187 (2%)
 Frame = +1

Query: 139 LSSQKQSFASLLHCCS--SHPNQLKQIHALLLTTGLSIKNXXXXXXXXXXXXXGDMAYAR 312
           +S    +F  LL  CS  SH    + +HA +   G                    +  AR
Sbjct: 115 VSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSAR 174

Query: 313 RLFDEMHKPRSFL--WNTLIKGYVKNELFHDAVALYGQMHRISVRPDQFTFPFVLKGCAG 486
            +F+ +  P   +  W  ++  Y +N    +A+ ++  M ++ V+PD      VL     
Sbjct: 175 TVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSHMRKMDVKPDWVALVSVLNAFTC 234

Query: 487 LVDQSCGAEVHAHVVKSGVDFDAIVRTELMIMYAKFEDLDSADYLFESMHERDLVAWNAL 666
           L D   G  +HA VVK G++ +  +   L  MYAK   + +A  LF+ M   +L+ WNA+
Sbjct: 235 LQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAM 294

Query: 667 MSVYTQN 687
           +S Y +N
Sbjct: 295 ISGYAKN 301


>ref|XP_002884925.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297330765|gb|EFH61184.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 694

 Score =  137 bits (346), Expect = 3e-30
 Identities = 76/198 (38%), Positives = 108/198 (54%), Gaps = 2/198 (1%)
 Frame = +1

Query: 100 SALSVTHFGTNNSLSSQKQSFASLLHCCSSHPNQLKQIHALLLTTGLSIKNXXXXXXXXX 279
           S L+     TN+ + S   SF + L   S+H  QL+QIHA LL  GL             
Sbjct: 5   SCLASPFLYTNSGIHSD--SFYASLIDSSTHKAQLRQIHARLLVLGLQFSGFLITKLIHA 62

Query: 280 XXXXGDMAYARRLFDEMHKPRSFLWNTLIKGYVKNELFHDAVALYGQMHRISVRPDQFTF 459
               GD+ +AR++FD++ +P+ F WN +I+GY +N  F DA+ +Y +M    V PD FTF
Sbjct: 63  SSSYGDITFARQVFDDLPRPQVFPWNAIIRGYSRNNHFQDALLMYSKMQLARVSPDSFTF 122

Query: 460 PFVLKGCAGLVDQSCGAEVHAHVVKSGVDFDAIVRTELMIMYAKFEDLDSADYLFES--M 633
           P +LK C GL     G  VHA V + G + D  V+  L+ +YAK   L  A  +FE   +
Sbjct: 123 PHLLKACGGLSHLQMGRFVHAQVFRLGFEADVFVQNGLIALYAKCRRLGCARTVFEGLPL 182

Query: 634 HERDLVAWNALMSVYTQN 687
            ER +V+W A++S Y QN
Sbjct: 183 PERTIVSWTAIVSAYAQN 200



 Score = 84.7 bits (208), Expect = 3e-14
 Identities = 48/166 (28%), Positives = 78/166 (46%)
 Frame = +1

Query: 181 CSSHPNQLKQIHALLLTTGLSIKNXXXXXXXXXXXXXGDMAYARRLFDEMHKPRSFLWNT 360
           C     Q + IHA ++  GL  +              G +A A+ LFD+M  P   LWN 
Sbjct: 234 CLQDLEQGRSIHASVMKMGLETEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNA 293

Query: 361 LIKGYVKNELFHDAVALYGQMHRISVRPDQFTFPFVLKGCAGLVDQSCGAEVHAHVVKSG 540
           +I GY KN    DA+ L+ +M    VRPD  +    +  CA +        +  +V +S 
Sbjct: 294 MISGYAKNGFAKDAIDLFHEMINKDVRPDTISITSAISACAQVGSLEQARWMDEYVSRSD 353

Query: 541 VDFDAIVRTELMIMYAKFEDLDSADYLFESMHERDLVAWNALMSVY 678
              D  + + L+ M+AK   ++ A  +F+   +RD+V W+A++  Y
Sbjct: 354 YRDDVFISSALIDMFAKCGSVECARSVFDRTLDRDVVVWSAMIVGY 399



 Score = 75.9 bits (185), Expect = 1e-11
 Identities = 49/187 (26%), Positives = 83/187 (44%), Gaps = 4/187 (2%)
 Frame = +1

Query: 139 LSSQKQSFASLLHCCS--SHPNQLKQIHALLLTTGLSIKNXXXXXXXXXXXXXGDMAYAR 312
           +S    +F  LL  C   SH    + +HA +   G                    +  AR
Sbjct: 115 VSPDSFTFPHLLKACGGLSHLQMGRFVHAQVFRLGFEADVFVQNGLIALYAKCRRLGCAR 174

Query: 313 RLFDEMHKPRSFL--WNTLIKGYVKNELFHDAVALYGQMHRISVRPDQFTFPFVLKGCAG 486
            +F+ +  P   +  W  ++  Y +N    +A+ ++ QM ++ V+PD      VL     
Sbjct: 175 TVFEGLPLPERTIVSWTAIVSAYAQNGEPVEALEIFSQMRKMDVKPDCVALVSVLNAFTC 234

Query: 487 LVDQSCGAEVHAHVVKSGVDFDAIVRTELMIMYAKFEDLDSADYLFESMHERDLVAWNAL 666
           L D   G  +HA V+K G++ +  +   L  MYAK   + +A  LF+ M   +L+ WNA+
Sbjct: 235 LQDLEQGRSIHASVMKMGLETEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAM 294

Query: 667 MSVYTQN 687
           +S Y +N
Sbjct: 295 ISGYAKN 301


>ref|XP_006299513.1| hypothetical protein CARUB_v10015683mg [Capsella rubella]
           gi|482568222|gb|EOA32411.1| hypothetical protein
           CARUB_v10015683mg [Capsella rubella]
          Length = 694

 Score =  136 bits (343), Expect = 6e-30
 Identities = 75/198 (37%), Positives = 109/198 (55%), Gaps = 2/198 (1%)
 Frame = +1

Query: 100 SALSVTHFGTNNSLSSQKQSFASLLHCCSSHPNQLKQIHALLLTTGLSIKNXXXXXXXXX 279
           +AL  + F   NS       +ASL+   S+H  QL+QIHA LL  GL             
Sbjct: 4   AALLASPFLYTNSGIHSDSFYASLIDS-STHKAQLRQIHARLLVLGLHFSGFLITKLIQA 62

Query: 280 XXXXGDMAYARRLFDEMHKPRSFLWNTLIKGYVKNELFHDAVALYGQMHRISVRPDQFTF 459
               GD+ +AR++FD++ +P+ F WN +I+GY +N  F DA+ +Y +M    V PD FTF
Sbjct: 63  SSSFGDVTFARQVFDDLPRPQIFPWNAIIRGYSRNSYFQDALLMYSKMQLARVSPDSFTF 122

Query: 460 PFVLKGCAGLVDQSCGAEVHAHVVKSGVDFDAIVRTELMIMYAKFEDLDSADYLFES--M 633
           P +LK C+GL     G  VH+ V + G + D  V+  L+ +YAK   L  A  +FE   +
Sbjct: 123 PHLLKACSGLSHLPMGRLVHSQVFRLGFEADVFVQNGLIALYAKCRRLGCARTVFEGLPL 182

Query: 634 HERDLVAWNALMSVYTQN 687
            ER +V+W A++S Y QN
Sbjct: 183 PERTIVSWTAIISAYAQN 200



 Score = 86.3 bits (212), Expect = 9e-15
 Identities = 51/168 (30%), Positives = 83/168 (49%), Gaps = 2/168 (1%)
 Frame = +1

Query: 181 CSSHPNQLKQIHALLLTTGLSIKNXXXXXXXXXXXXXGDMAYARRLFDEMHKPRSFLWNT 360
           C     Q + IHA ++  GL  +              G +A A+ LFD+M  P   LWN 
Sbjct: 234 CLQDLEQGRSIHASVVKMGLETEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNA 293

Query: 361 LIKGYVKNELFHDAVALYGQMHRISVRPDQFTFPFVLKGCA--GLVDQSCGAEVHAHVVK 534
           +I GY KN    DA+ ++ +M    VRPD  +    +  CA  G ++Q+C  E   +V +
Sbjct: 294 MISGYAKNGYAKDAIDMFHKMIDKDVRPDTISITSAISACAQVGCLEQACWME--KYVGR 351

Query: 535 SGVDFDAIVRTELMIMYAKFEDLDSADYLFESMHERDLVAWNALMSVY 678
           S    D  + + L+ M+AK   ++ A  +F+   +RD+V W+A++  Y
Sbjct: 352 SDYRDDVFISSALIDMFAKCGSVECARSVFDRTLDRDVVVWSAMIVGY 399



 Score = 79.3 bits (194), Expect = 1e-12
 Identities = 51/187 (27%), Positives = 84/187 (44%), Gaps = 4/187 (2%)
 Frame = +1

Query: 139 LSSQKQSFASLLHCCS--SHPNQLKQIHALLLTTGLSIKNXXXXXXXXXXXXXGDMAYAR 312
           +S    +F  LL  CS  SH    + +H+ +   G                    +  AR
Sbjct: 115 VSPDSFTFPHLLKACSGLSHLPMGRLVHSQVFRLGFEADVFVQNGLIALYAKCRRLGCAR 174

Query: 313 RLFDEMHKPRSFL--WNTLIKGYVKNELFHDAVALYGQMHRISVRPDQFTFPFVLKGCAG 486
            +F+ +  P   +  W  +I  Y +N    +A+ ++ QM ++ V+PD      VL     
Sbjct: 175 TVFEGLPLPERTIVSWTAIISAYAQNGELVEALEIFSQMRKMGVKPDWVALVSVLNAFTC 234

Query: 487 LVDQSCGAEVHAHVVKSGVDFDAIVRTELMIMYAKFEDLDSADYLFESMHERDLVAWNAL 666
           L D   G  +HA VVK G++ +  +   L  MYAK   + +A  LF+ M   +L+ WNA+
Sbjct: 235 LQDLEQGRSIHASVVKMGLETEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAM 294

Query: 667 MSVYTQN 687
           +S Y +N
Sbjct: 295 ISGYAKN 301


>ref|XP_006299486.1| hypothetical protein CARUB_v10015651mg [Capsella rubella]
           gi|482568195|gb|EOA32384.1| hypothetical protein
           CARUB_v10015651mg [Capsella rubella]
          Length = 534

 Score =  134 bits (338), Expect = 2e-29
 Identities = 69/185 (37%), Positives = 106/185 (57%), Gaps = 1/185 (0%)
 Frame = +1

Query: 133 NSLSSQKQSFASLLHCCSSHPNQLKQIHALLLTTGLSIKNXXXXXXXXXXXXXGDMAYAR 312
           N +   +  F SLL    S  N+LK+IHA ++  GLS  +             GDM YA 
Sbjct: 4   NGIREVENCFVSLLQRFRSR-NELKKIHASIIIHGLSQSSFMVTKMVDSCDKIGDMEYAT 62

Query: 313 RLFDEMHKPRSFLWNTLIKGYVKNELFHDAVALYGQMHRISVR-PDQFTFPFVLKGCAGL 489
           RLF+++  P  FL+N++I+ Y  + L+ + + +Y Q+   S+  PD+FTFPF+ K CA L
Sbjct: 63  RLFNQVSYPNVFLYNSIIRAYTHHSLYCEVIRIYRQLFMKSIELPDRFTFPFMFKSCASL 122

Query: 490 VDQSCGAEVHAHVVKSGVDFDAIVRTELMIMYAKFEDLDSADYLFESMHERDLVAWNALM 669
                G +VH H+ K G  F  +    L+ MY KF+DL  AD +F+ M +RD+++WN+L+
Sbjct: 123 GSCYLGKQVHGHLCKFGPKFHVVTENALIDMYMKFDDLADADRVFDEMSDRDVISWNSLL 182

Query: 670 SVYTQ 684
           S Y +
Sbjct: 183 SGYAR 187



 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 34/132 (25%), Positives = 59/132 (44%)
 Frame = +1

Query: 292 GDMAYARRLFDEMHKPRSFLWNTLIKGYVKNELFHDAVALYGQMHRISVRPDQFTFPFVL 471
           G M  A+ LF  M       W  +I GY     + +A+  + +M    + PD+ +   VL
Sbjct: 189 GQMKKAKALFRLMPDKTIVSWTAMISGYSGIGCYVEAMDFFREMQLAGIEPDEISLISVL 248

Query: 472 KGCAGLVDQSCGAEVHAHVVKSGVDFDAIVRTELMIMYAKFEDLDSADYLFESMHERDLV 651
             CA L     G  +H +  +        V   L+ MY+K   +  A  LF+ M  +D++
Sbjct: 249 PSCAHLGSLELGKWIHMYAERRRFLKQTGVCNALIEMYSKCGVISQAIQLFDQMKRKDVI 308

Query: 652 AWNALMSVYTQN 687
           +W+ ++S Y  +
Sbjct: 309 SWSTMISGYAHH 320


>ref|XP_002884209.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297330049|gb|EFH60468.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 534

 Score =  131 bits (330), Expect = 2e-28
 Identities = 64/164 (39%), Positives = 97/164 (59%), Gaps = 1/164 (0%)
 Frame = +1

Query: 196 NQLKQIHALLLTTGLSIKNXXXXXXXXXXXXXGDMAYARRLFDEMHKPRSFLWNTLIKGY 375
           N+ K+IHA ++  GLS  +             GDM YA RLF+++  P  FL+N++I+ Y
Sbjct: 24  NEWKKIHACIIVHGLSQSSFMVTKMVDLCDKLGDMDYATRLFNQVSNPNVFLYNSIIRAY 83

Query: 376 VKNELFHDAVALYGQMHRISVR-PDQFTFPFVLKGCAGLVDQSCGAEVHAHVVKSGVDFD 552
             N L+ D + +Y Q+ R ++  PD+FTFPF+ K CA L     G +VH H+ K G  F 
Sbjct: 84  THNSLYCDVIRIYKQLLRKTIEFPDRFTFPFMFKSCASLGSCYLGKQVHGHLYKFGPRFH 143

Query: 553 AIVRTELMIMYAKFEDLDSADYLFESMHERDLVAWNALMSVYTQ 684
            +    L+ MY KF+DL  A  +F+ M ERD+++WN+L+S Y +
Sbjct: 144 VVTENALIDMYMKFDDLVDAHKVFDEMSERDVISWNSLLSGYAR 187



 Score = 61.2 bits (147), Expect = 3e-07
 Identities = 36/129 (27%), Positives = 59/129 (45%)
 Frame = +1

Query: 292 GDMAYARRLFDEMHKPRSFLWNTLIKGYVKNELFHDAVALYGQMHRISVRPDQFTFPFVL 471
           G M  A+ LF  M       W  +I GY     + +A+  + +M    + PD+ +   VL
Sbjct: 189 GQMKKAKGLFHLMIDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVL 248

Query: 472 KGCAGLVDQSCGAEVHAHVVKSGVDFDAIVRTELMIMYAKFEDLDSADYLFESMHERDLV 651
             CA L     G  +H +  + G+     V   L+ MY+K   L  A  LFE    +D++
Sbjct: 249 PSCAHLGSLELGKWIHMYAERRGLLKQTGVCNALIEMYSKCGMLSQAIQLFEQTKGKDVI 308

Query: 652 AWNALMSVY 678
           +W+ ++S Y
Sbjct: 309 SWSTMISGY 317


>ref|XP_004304934.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g12770-like [Fragaria vesca subsp. vesca]
          Length = 739

 Score =  130 bits (328), Expect = 3e-28
 Identities = 75/204 (36%), Positives = 108/204 (52%), Gaps = 1/204 (0%)
 Frame = +1

Query: 79  PLCIRRYSALSVT-HFGTNNSLSSQKQSFASLLHCCSSHPNQLKQIHALLLTTGLSIKNX 255
           PL +  Y + + T HFG ++     + SFAS +   S+    L QIHA LL  G      
Sbjct: 48  PLSLDSYFSDNHTLHFGYDS-----ESSFASFIDS-STRRTHLTQIHAQLLVLGFQASAF 101

Query: 256 XXXXXXXXXXXXGDMAYARRLFDEMHKPRSFLWNTLIKGYVKNELFHDAVALYGQMHRIS 435
                       G ++YAR++FDE   P  FLWN +I+GY K+  + DAV +Y  M  + 
Sbjct: 102 LITKLVNCSSNLGHISYARQVFDEFTDPGVFLWNAIIRGYSKHNAYADAVQMYCGMQEMG 161

Query: 436 VRPDQFTFPFVLKGCAGLVDQSCGAEVHAHVVKSGVDFDAIVRTELMIMYAKFEDLDSAD 615
           V PD FTFP VLK C GL     G  VH  V + G + + +V+  L+  YAK   +D A 
Sbjct: 162 VGPDGFTFPHVLKACGGLGAVEIGRRVHGQVFRHGFESNVVVQNSLVAFYAKCGRVDRAR 221

Query: 616 YLFESMHERDLVAWNALMSVYTQN 687
            +F+ + ER +V+W +++S Y QN
Sbjct: 222 IVFDGLGERSIVSWTSIISGYAQN 245



 Score = 85.1 bits (209), Expect = 2e-14
 Identities = 49/160 (30%), Positives = 74/160 (46%)
 Frame = +1

Query: 199 QLKQIHALLLTTGLSIKNXXXXXXXXXXXXXGDMAYARRLFDEMHKPRSFLWNTLIKGYV 378
           Q + +H  L+  GL  +              G +  AR LFD+M +P   +WN +I GY 
Sbjct: 285 QGRSVHGCLVKMGLEFEPDLVISLTAMYAKSGQVMVARSLFDKMERPNVIMWNAMISGYA 344

Query: 379 KNELFHDAVALYGQMHRISVRPDQFTFPFVLKGCAGLVDQSCGAEVHAHVVKSGVDFDAI 558
           KN     AV L+ +M   S+R D  T    +  CA +        +  +V KS       
Sbjct: 345 KNGHAEKAVELFREMISRSIRIDSITLRSAIVACAQVGSLELAKWMDGYVCKSEYRNHVF 404

Query: 559 VRTELMIMYAKFEDLDSADYLFESMHERDLVAWNALMSVY 678
           V T L+ MYAK   +DSA  +F+    +D+V W+A++  Y
Sbjct: 405 VNTSLIDMYAKCGSVDSARMVFDRTPNKDVVVWSAMIVGY 444



 Score = 79.3 bits (194), Expect = 1e-12
 Identities = 42/132 (31%), Positives = 71/132 (53%)
 Frame = +1

Query: 292 GDMAYARRLFDEMHKPRSFLWNTLIKGYVKNELFHDAVALYGQMHRISVRPDQFTFPFVL 471
           G +  AR +FD + +     W ++I GY +N    +A+ ++G M +++V+PD      VL
Sbjct: 215 GRVDRARIVFDGLGERSIVSWTSIISGYAQNGECLEALRIFGLMRKVNVKPDWIVLVSVL 274

Query: 472 KGCAGLVDQSCGAEVHAHVVKSGVDFDAIVRTELMIMYAKFEDLDSADYLFESMHERDLV 651
           K    + D   G  VH  +VK G++F+  +   L  MYAK   +  A  LF+ M   +++
Sbjct: 275 KAYTDVEDLGQGRSVHGCLVKMGLEFEPDLVISLTAMYAKSGQVMVARSLFDKMERPNVI 334

Query: 652 AWNALMSVYTQN 687
            WNA++S Y +N
Sbjct: 335 MWNAMISGYAKN 346


>ref|XP_006339048.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Solanum tuberosum]
          Length = 680

 Score =  130 bits (326), Expect = 5e-28
 Identities = 71/187 (37%), Positives = 105/187 (56%), Gaps = 2/187 (1%)
 Frame = +1

Query: 124 GTNNSLSSQKQSFASLLHCCS--SHPNQLKQIHALLLTTGLSIKNXXXXXXXXXXXXXGD 297
           G  + L  QKQ   SLL   +  S  N LK +H  LL TGL   +             G 
Sbjct: 3   GPCSGLWQQKQFALSLLKSPNKLSTLNHLKSLHVYLLRTGLHHSSFAVGNFITHCASLGL 62

Query: 298 MAYARRLFDEMHKPRSFLWNTLIKGYVKNELFHDAVALYGQMHRISVRPDQFTFPFVLKG 477
           M+YA +LFD+M +P SF+WNTLI+G+ +N      +  + QM   + +PD+FT+PF ++ 
Sbjct: 63  MSYAAQLFDQMSEPNSFVWNTLIRGFQQNHSPKYTLYYFDQMRVNNAQPDRFTYPFTIRA 122

Query: 478 CAGLVDQSCGAEVHAHVVKSGVDFDAIVRTELMIMYAKFEDLDSADYLFESMHERDLVAW 657
           C+GL++ + GA +H  VVK GV+FD  V T L+  Y    DL+    +FE + ++D V W
Sbjct: 123 CSGLLEFAKGASLHGQVVKIGVNFDVFVGTSLVDFYTAMGDLNMTKQVFEELPDKDEVTW 182

Query: 658 NALMSVY 678
            A++S Y
Sbjct: 183 YAMLSSY 189



 Score = 80.5 bits (197), Expect = 5e-13
 Identities = 43/132 (32%), Positives = 73/132 (55%)
 Frame = +1

Query: 292 GDMAYARRLFDEMHKPRSFLWNTLIKGYVKNELFHDAVALYGQMHRISVRPDQFTFPFVL 471
           G++    RLF EM       WNT+I G V++   ++A+  + +M R+++ PD  T   +L
Sbjct: 256 GEVDRLLRLFHEMPCRDLVSWNTVIGGLVRDGRINEAMRFFYEMERVNLSPDDVTLASLL 315

Query: 472 KGCAGLVDQSCGAEVHAHVVKSGVDFDAIVRTELMIMYAKFEDLDSADYLFESMHERDLV 651
             CA       G  +H+++ +   + +A++ T L+ MY K  DL SA  +F  M ERD+V
Sbjct: 316 SACAQAGALDIGKWLHSYIDRRCSELNAVIGTALVDMYCKCGDLGSAADVFNKMSERDVV 375

Query: 652 AWNALMSVYTQN 687
           AW+A++   + N
Sbjct: 376 AWSAMIMGSSMN 387


>ref|XP_003551818.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g12770-like [Glycine max]
          Length = 727

 Score =  130 bits (326), Expect = 5e-28
 Identities = 67/196 (34%), Positives = 102/196 (52%)
 Frame = +1

Query: 100 SALSVTHFGTNNSLSSQKQSFASLLHCCSSHPNQLKQIHALLLTTGLSIKNXXXXXXXXX 279
           SAL   HF  ++   +    +ASL+   S+H   L QIH  L+ +GL             
Sbjct: 39  SALHPEHFVNHDHCFNSDSFYASLIDN-STHKRHLDQIHNRLVISGLQHNGFLMTKLVNG 97

Query: 280 XXXXGDMAYARRLFDEMHKPRSFLWNTLIKGYVKNELFHDAVALYGQMHRISVRPDQFTF 459
               G + YAR+LFDE   P  F+WN +I+ Y +N ++ D V +Y  M    V PD FTF
Sbjct: 98  SSNLGQICYARKLFDEFCYPDVFMWNAIIRSYSRNNMYRDTVEMYRWMRWTGVHPDGFTF 157

Query: 460 PFVLKGCAGLVDQSCGAEVHAHVVKSGVDFDAIVRTELMIMYAKFEDLDSADYLFESMHE 639
           P+VLK C  L+D      +H  ++K G   D  V+  L+ +YAK   +  A  +F+ ++ 
Sbjct: 158 PYVLKACTELLDFGLSCIIHGQIIKYGFGSDVFVQNGLVALYAKCGHIGVAKVVFDGLYH 217

Query: 640 RDLVAWNALMSVYTQN 687
           R +V+W +++S Y QN
Sbjct: 218 RTIVSWTSIISGYAQN 233



 Score = 71.2 bits (173), Expect = 3e-10
 Identities = 43/160 (26%), Positives = 72/160 (45%)
 Frame = +1

Query: 199 QLKQIHALLLTTGLSIKNXXXXXXXXXXXXXGDMAYARRLFDEMHKPRSFLWNTLIKGYV 378
           Q + IH  ++  GL  +              G +  A+  FD+M      +WN +I GY 
Sbjct: 273 QGRSIHGFVIKMGLEDEPALLISLTAFYAKCGLVTVAKSFFDQMKTTNVIMWNAMISGYA 332

Query: 379 KNELFHDAVALYGQMHRISVRPDQFTFPFVLKGCAGLVDQSCGAEVHAHVVKSGVDFDAI 558
           KN    +AV L+  M   +++PD  T    +   A +        +  +V KS    D  
Sbjct: 333 KNGHAEEAVNLFHYMISRNIKPDSVTVRSAVLASAQVGSLELAQWMDDYVSKSNYGSDIF 392

Query: 559 VRTELMIMYAKFEDLDSADYLFESMHERDLVAWNALMSVY 678
           V T L+ MYAK   ++ A  +F+   ++D+V W+A++  Y
Sbjct: 393 VNTSLIDMYAKCGSVEFARRVFDRNSDKDVVMWSAMIMGY 432



 Score = 70.5 bits (171), Expect = 5e-10
 Identities = 35/132 (26%), Positives = 65/132 (49%)
 Frame = +1

Query: 292 GDMAYARRLFDEMHKPRSFLWNTLIKGYVKNELFHDAVALYGQMHRISVRPDQFTFPFVL 471
           G +  A+ +FD ++      W ++I GY +N    +A+ ++ QM    V+PD      +L
Sbjct: 203 GHIGVAKVVFDGLYHRTIVSWTSIISGYAQNGKAVEALRMFSQMRNNGVKPDWIALVSIL 262

Query: 472 KGCAGLVDQSCGAEVHAHVVKSGVDFDAIVRTELMIMYAKFEDLDSADYLFESMHERDLV 651
           +    + D   G  +H  V+K G++ +  +   L   YAK   +  A   F+ M   +++
Sbjct: 263 RAYTDVDDLEQGRSIHGFVIKMGLEDEPALLISLTAFYAKCGLVTVAKSFFDQMKTTNVI 322

Query: 652 AWNALMSVYTQN 687
            WNA++S Y +N
Sbjct: 323 MWNAMISGYAKN 334


>ref|XP_002265522.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g08820-like [Vitis vinifera]
          Length = 686

 Score =  129 bits (325), Expect = 7e-28
 Identities = 65/159 (40%), Positives = 91/159 (57%)
 Frame = +1

Query: 202 LKQIHALLLTTGLSIKNXXXXXXXXXXXXXGDMAYARRLFDEMHKPRSFLWNTLIKGYVK 381
           LK +HA LL  GL   N              D  Y R LF ++ +P  FLWNT+I+G V 
Sbjct: 30  LKHLHAHLLRFGLCHDNYLLNMILRCSFDFSDTNYTRFLFHQIKQPNIFLWNTMIRGLVS 89

Query: 382 NELFHDAVALYGQMHRISVRPDQFTFPFVLKGCAGLVDQSCGAEVHAHVVKSGVDFDAIV 561
           N+ F DA+  YG M      P+ FTFPFVLK CA L+D   G ++H  VVK G D D  V
Sbjct: 90  NDCFDDAIEFYGLMRSEGFLPNNFTFPFVLKACARLLDLQLGVKIHTLVVKGGFDCDVFV 149

Query: 562 RTELMIMYAKFEDLDSADYLFESMHERDLVAWNALMSVY 678
           +T L+ +YAK   L+ A  +F+ + ++++V+W A++S Y
Sbjct: 150 KTSLVCLYAKCGYLEDAHKVFDDIPDKNVVSWTAIISGY 188



 Score = 82.8 bits (203), Expect = 1e-13
 Identities = 43/160 (26%), Positives = 80/160 (50%)
 Frame = +1

Query: 208 QIHALLLTTGLSIKNXXXXXXXXXXXXXGDMAYARRLFDEMHKPRSFLWNTLIKGYVKNE 387
           +IH L++  G                  G +  A ++FD++       W  +I GY+   
Sbjct: 133 KIHTLVVKGGFDCDVFVKTSLVCLYAKCGYLEDAHKVFDDIPDKNVVSWTAIISGYIGVG 192

Query: 388 LFHDAVALYGQMHRISVRPDQFTFPFVLKGCAGLVDQSCGAEVHAHVVKSGVDFDAIVRT 567
            F +A+ ++ ++  +++ PD FT   VL  C  L D + G  +H  +++ G+  +  V T
Sbjct: 193 KFREAIDMFRRLLEMNLAPDSFTIVRVLSACTQLGDLNSGEWIHKCIMEMGMVRNVFVGT 252

Query: 568 ELMIMYAKFEDLDSADYLFESMHERDLVAWNALMSVYTQN 687
            L+ MYAK  +++ A  +F+ M E+D+V+W A++  Y  N
Sbjct: 253 SLVDMYAKCGNMEKARSVFDGMPEKDIVSWGAMIQGYALN 292



 Score = 78.6 bits (192), Expect = 2e-12
 Identities = 46/132 (34%), Positives = 71/132 (53%)
 Frame = +1

Query: 292 GDMAYARRLFDEMHKPRSFLWNTLIKGYVKNELFHDAVALYGQMHRISVRPDQFTFPFVL 471
           G+M  AR +FD M +     W  +I+GY  N L  +A+ L+ QM R +V+PD +T   VL
Sbjct: 262 GNMEKARSVFDGMPEKDIVSWGAMIQGYALNGLPKEAIDLFLQMQRENVKPDCYTVVGVL 321

Query: 472 KGCAGLVDQSCGAEVHAHVVKSGVDFDAIVRTELMIMYAKFEDLDSADYLFESMHERDLV 651
             CA L     G  V   V ++   ++ ++ T L+ +YAK   +  A  +F+ M E+D V
Sbjct: 322 SACARLGALELGEWVSGLVDRNEFLYNPVLGTALIDLYAKCGSMSRAWEVFKGMKEKDRV 381

Query: 652 AWNALMSVYTQN 687
            WNA++S    N
Sbjct: 382 VWNAIISGLAMN 393


>ref|XP_002276196.1| PREDICTED: pentatricopeptide repeat-containing protein At3g12770
           [Vitis vinifera] gi|296081235|emb|CBI17979.3| unnamed
           protein product [Vitis vinifera]
          Length = 742

 Score =  129 bits (324), Expect = 9e-28
 Identities = 65/177 (36%), Positives = 97/177 (54%)
 Frame = +1

Query: 157 SFASLLHCCSSHPNQLKQIHALLLTTGLSIKNXXXXXXXXXXXXXGDMAYARRLFDEMHK 336
           SF S L   S H   L QIHA L+ +GL                 G++ YAR++FDE  +
Sbjct: 72  SFFSSLLDHSVHKRHLNQIHAQLVVSGLVESGFLVTKFVNASWNIGEIGYARKVFDEFPE 131

Query: 337 PRSFLWNTLIKGYVKNELFHDAVALYGQMHRISVRPDQFTFPFVLKGCAGLVDQSCGAEV 516
           P  FLWN +I+GY  +  F DA+ +Y +M    V PD FT P VLK C+G+     G  V
Sbjct: 132 PSVFLWNAIIRGYSSHNFFGDAIEMYSRMQASGVNPDGFTLPCVLKACSGVPVLEVGKRV 191

Query: 517 HAHVVKSGVDFDAIVRTELMIMYAKFEDLDSADYLFESMHERDLVAWNALMSVYTQN 687
           H  + + G + D  V+  L+ +YAK   ++ A  +FE + +R++V+W +++S Y QN
Sbjct: 192 HGQIFRLGFESDVFVQNGLVALYAKCGRVEQARIVFEGLDDRNIVSWTSMISGYGQN 248



 Score = 79.3 bits (194), Expect = 1e-12
 Identities = 45/160 (28%), Positives = 75/160 (46%)
 Frame = +1

Query: 199 QLKQIHALLLTTGLSIKNXXXXXXXXXXXXXGDMAYARRLFDEMHKPRSFLWNTLIKGYV 378
           Q K IH  ++  GL  +              G +  AR  FD+M  P   +WN +I GY 
Sbjct: 288 QGKSIHGCVVKMGLEFEPDLLISLTAMYAKCGQVMVARSFFDQMEIPNVMMWNAMISGYA 347

Query: 379 KNELFHDAVALYGQMHRISVRPDQFTFPFVLKGCAGLVDQSCGAEVHAHVVKSGVDFDAI 558
           KN   ++AV L+ +M   ++R D  T    +  CA +        +  ++ K+    D  
Sbjct: 348 KNGYTNEAVGLFQEMISKNIRTDSITVRSAILACAQVGSLDLAKWMGDYINKTEYRNDVF 407

Query: 559 VRTELMIMYAKFEDLDSADYLFESMHERDLVAWNALMSVY 678
           V T L+ M+AK   +D A  +F+   ++D+V W+A++  Y
Sbjct: 408 VNTALIDMFAKCGSVDLAREVFDRTLDKDVVVWSAMIVGY 447



 Score = 77.8 bits (190), Expect = 3e-12
 Identities = 48/175 (27%), Positives = 81/175 (46%), Gaps = 2/175 (1%)
 Frame = +1

Query: 169 LLHCCSSHP--NQLKQIHALLLTTGLSIKNXXXXXXXXXXXXXGDMAYARRLFDEMHKPR 342
           +L  CS  P     K++H  +   G                  G +  AR +F+ +    
Sbjct: 175 VLKACSGVPVLEVGKRVHGQIFRLGFESDVFVQNGLVALYAKCGRVEQARIVFEGLDDRN 234

Query: 343 SFLWNTLIKGYVKNELFHDAVALYGQMHRISVRPDQFTFPFVLKGCAGLVDQSCGAEVHA 522
              W ++I GY +N L  +A+ ++GQM + +V+PD      VL+    + D   G  +H 
Sbjct: 235 IVSWTSMISGYGQNGLPMEALRIFGQMRQRNVKPDWIALVSVLRAYTDVEDLEQGKSIHG 294

Query: 523 HVVKSGVDFDAIVRTELMIMYAKFEDLDSADYLFESMHERDLVAWNALMSVYTQN 687
            VVK G++F+  +   L  MYAK   +  A   F+ M   +++ WNA++S Y +N
Sbjct: 295 CVVKMGLEFEPDLLISLTAMYAKCGQVMVARSFFDQMEIPNVMMWNAMISGYAKN 349