BLASTX nr result

ID: Sinomenium22_contig00042720 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium22_contig00042720
         (284 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_007211897.1| hypothetical protein PRUPE_ppa010317mg [Prun...    68   1e-09
ref|XP_004293884.1| PREDICTED: uncharacterized protein LOC101299...    64   3e-08
ref|XP_004232622.1| PREDICTED: uncharacterized protein LOC101252...    59   5e-07
ref|XP_004145209.1| PREDICTED: pentatricopeptide repeat-containi...    57   3e-06
ref|XP_003631195.1| PREDICTED: pentatricopeptide repeat-containi...    56   4e-06
ref|XP_002528136.1| conserved hypothetical protein [Ricinus comm...    55   8e-06

>ref|XP_007211897.1| hypothetical protein PRUPE_ppa010317mg [Prunus persica]
           gi|462407762|gb|EMJ13096.1| hypothetical protein
           PRUPE_ppa010317mg [Prunus persica]
          Length = 254

 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 35/73 (47%), Positives = 47/73 (64%), Gaps = 10/73 (13%)
 Frame = +2

Query: 2   LRVVRAMVEAEIVPGSETRRWLLRGLLREARISEAQETNEALGC----------DCVGKM 151
           L+V+RAM+   IVPG + ++W+ + LLREARI EA E NEALGC          +CV K+
Sbjct: 182 LKVLRAMLSTNIVPGCDLKKWVYKVLLREARIKEAVELNEALGCVGDREKGDESECVKKV 241

Query: 152 GELLDQIIRNWKD 190
             LLD +I NW +
Sbjct: 242 LALLDHMIGNWAE 254


>ref|XP_004293884.1| PREDICTED: uncharacterized protein LOC101299936 [Fragaria vesca
           subsp. vesca]
          Length = 147

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 36/71 (50%), Positives = 46/71 (64%), Gaps = 8/71 (11%)
 Frame = +2

Query: 2   LRVVRAMVEAEIVPGSETRRWLLRGLLREARISEAQETNEALGCDCVG--------KMGE 157
           L V+RAM+   IVPG + R+W+ RGLLREARI EA E N+AL  DCVG        K+  
Sbjct: 79  LNVLRAMLGVNIVPGCDLRKWVYRGLLREARIKEALELNKAL--DCVGDGESEGFRKVLA 136

Query: 158 LLDQIIRNWKD 190
           LLD +I +W +
Sbjct: 137 LLDHMIDSWTE 147


>ref|XP_004232622.1| PREDICTED: uncharacterized protein LOC101252041 [Solanum
           lycopersicum]
          Length = 252

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 34/66 (51%), Positives = 38/66 (57%), Gaps = 5/66 (7%)
 Frame = +2

Query: 2   LRVVRAMVEAEIVPGSETRRWLLRGLLREARISEAQETNEALGCDCVGKMGE-----LLD 166
           L+V+R MV   +  G E R W+ R LLREARI EAQE NE L C   G  G      LLD
Sbjct: 185 LKVLRMMVVGNLKVGGEVRMWVYRSLLREARIKEAQELNEDLKCVENGDKGNEEVVALLD 244

Query: 167 QIIRNW 184
            II NW
Sbjct: 245 SIISNW 250


>ref|XP_004145209.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Cucumis sativus]
           gi|449471407|ref|XP_004153300.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At4g20090-like [Cucumis sativus]
           gi|449474047|ref|XP_004154059.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At4g20090-like [Cucumis sativus]
           gi|449503375|ref|XP_004161971.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At4g20090-like [Cucumis sativus]
          Length = 258

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 29/70 (41%), Positives = 44/70 (62%), Gaps = 7/70 (10%)
 Frame = +2

Query: 2   LRVVRAMVEAEIVPGSETRRWLLRGLLREARISEAQETNEALG-------CDCVGKMGEL 160
           L+V+R M+++ +VP  + R W+ R LL+EA I EA E N+AL         D + ++ EL
Sbjct: 189 LKVLRNMIDSNLVPDCDLRNWVFRSLLKEAMIPEAMEFNDALNFVGDQNTIDHLRRVSEL 248

Query: 161 LDQIIRNWKD 190
           L++II NW D
Sbjct: 249 LNRIITNWID 258


>ref|XP_003631195.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Vitis vinifera]
          Length = 142

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 30/66 (45%), Positives = 43/66 (65%), Gaps = 5/66 (7%)
 Frame = +2

Query: 2   LRVVRAMVEAEIVPGSETRRWLLRGLLREARISEAQETNEALGC-----DCVGKMGELLD 166
           L+V+RAMV A++ P ++ R  + R LLREARI EA+E +  L C     +  GK+  LLD
Sbjct: 75  LKVLRAMVGADMAPAADLRTRVYRSLLREARIGEAKELDAVLRCVGDGGEGFGKVANLLD 134

Query: 167 QIIRNW 184
           ++I NW
Sbjct: 135 RMIGNW 140


>ref|XP_002528136.1| conserved hypothetical protein [Ricinus communis]
           gi|223532434|gb|EEF34227.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 147

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 31/69 (44%), Positives = 42/69 (60%), Gaps = 6/69 (8%)
 Frame = +2

Query: 2   LRVVRAMVEAEIVPGSETRRWLLRGLLREARISEAQETNEAL------GCDCVGKMGELL 163
           LR++R MV+   VPG   RR + R LL EAR+ EA E ++AL        D V K+ +LL
Sbjct: 79  LRILRDMVDVGFVPGVRLRRRVYRSLLMEARVREAVELDKALCFYANGDVDGVSKLRKLL 138

Query: 164 DQIIRNWKD 190
           D +IRNW +
Sbjct: 139 DPVIRNWTE 147


Top