BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium22_contig00042603
         (2056 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279505.2| PREDICTED: chloroplastic group IIA intron sp...   720   0.0  
emb|CBI27903.3| unnamed protein product [Vitis vinifera]              720   0.0  
ref|XP_007012812.1| CRS1 / YhbY domain-containing protein, putat...   696   0.0  
ref|XP_007012816.1| CRS1 / YhbY domain-containing protein, putat...   680   0.0  
ref|XP_007012815.1| CRS1 / YhbY domain-containing protein, putat...   680   0.0  
ref|XP_004243753.1| PREDICTED: chloroplastic group IIA intron sp...   676   0.0  
ref|XP_002309217.2| hypothetical protein POPTR_0006s15340g [Popu...   674   0.0  
ref|XP_004171699.1| PREDICTED: chloroplastic group IIA intron sp...   674   0.0  
ref|XP_004144114.1| PREDICTED: chloroplastic group IIA intron sp...   674   0.0  
ref|XP_006357699.1| PREDICTED: chloroplastic group IIA intron sp...   673   0.0  
ref|XP_002514120.1| conserved hypothetical protein [Ricinus comm...   671   0.0  
gb|EXB38853.1| Chloroplastic group IIA intron splicing facilitat...   656   0.0  
ref|XP_004288953.1| PREDICTED: chloroplastic group IIA intron sp...   654   0.0  
ref|XP_007203795.1| hypothetical protein PRUPE_ppa001111mg [Prun...   654   0.0  
ref|XP_006840356.1| hypothetical protein AMTR_s00045p00114550 [A...   650   0.0  
gb|EYU29891.1| hypothetical protein MIMGU_mgv1a001353mg [Mimulus...   647   0.0  
ref|XP_003550629.1| PREDICTED: chloroplastic group IIA intron sp...   646   0.0  
ref|XP_006475466.1| PREDICTED: chloroplastic group IIA intron sp...   645   0.0  
ref|XP_006451488.1| hypothetical protein CICLE_v10007477mg [Citr...   645   0.0  
ref|XP_004507937.1| PREDICTED: chloroplastic group IIA intron sp...   642   0.0  

>ref|XP_002279505.2| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Vitis vinifera]
          Length = 884

 Score =  720 bits (1859), Expect = 0.0
 Identities = 374/566 (66%), Positives = 450/566 (79%), Gaps = 1/566 (0%)
 Frame = -1

Query: 2056 VKFEGPPASNMKRTHEILENRSGGLVIWRSGSSLVLYRGLAYKLRCVRTYNNLNQCHQDI 1877
            +KFEGP + NMKRTHEILE R+GGLVIWR+GSS+VLYRG+AYKL CV++Y    + + +I
Sbjct: 313  LKFEGPSSCNMKRTHEILETRTGGLVIWRTGSSVVLYRGMAYKLHCVQSYIKQERDNVNI 372

Query: 1876 VNPLKDPNSYVAGDDGVNNSLRSTKSSVTGSS-LPKDLSEKEQNDMSVLNNLLDGLGPRF 1700
                +D  + +  D GV + +++T+S ++ S+   KDLSE+E  D+S LN+LLD LGPRF
Sbjct: 373  SEYSQDAANVIIQDIGVKDIVKTTESVISDSARYLKDLSEEELMDLSELNHLLDELGPRF 432

Query: 1699 KDWSGCNPQPVDADLLPGVVPGYAPPFRLLPYGVKYSLRNKEMTFYRRRARVMPPHFALG 1520
            KDWSG  P PVDADLLP VV  Y PPFRLLPYG+++ LRN+EMTF RR AR MPPHFALG
Sbjct: 433  KDWSGREPLPVDADLLPSVVHEYKPPFRLLPYGMRHCLRNREMTFIRRLARTMPPHFALG 492

Query: 1519 RNRELQGLAQAMVKLWQRNAIAKIAIKRGVLNTCNERMAEELKKLTGGTLVSRNKDYIVF 1340
            R+RELQGLA AMVKLW+R+AIAKIAIKRGV NTCN+RMAEELK LTGGTLVSRNKDYIVF
Sbjct: 493  RSRELQGLAMAMVKLWERSAIAKIAIKRGVQNTCNDRMAEELKNLTGGTLVSRNKDYIVF 552

Query: 1339 YRGNDFLSPNVTEALLERQKLVELQQDEEELARQRASSVLNVSNAKAAKFPLVAGTLAET 1160
            YRGNDFL P+V EAL ER+KL +LQQDEEE AR RAS++++ S A++AK PLVAGTLAET
Sbjct: 553  YRGNDFLPPHVMEALKERRKLRDLQQDEEEQARHRASALID-SKARSAKGPLVAGTLAET 611

Query: 1159 TAANSRWGNEPSGEDIEKMKRDFALTKHASVVRCLENKLTLAQQKFKKAERALTKVQEFL 980
             AA SRWG+EPS ED+ KM RD AL +HAS+VR +  KL  A+ K KK E+AL KVQE L
Sbjct: 612  LAATSRWGSEPSEEDVGKMIRDSALARHASLVRYVGKKLAHAKAKLKKTEKALRKVQEDL 671

Query: 979  KPTELPTDLETISDEERFLYRKIGLSMKPFLLLGRRGVFDGTVENIHLHWKFRELVKIIV 800
            +P ELP DLET+SDEERFL+RKIGLSMKPFLLLG RG+FDGTVEN+HLHWK+RELVKIIV
Sbjct: 672  EPAELPMDLETLSDEERFLFRKIGLSMKPFLLLGTRGIFDGTVENMHLHWKYRELVKIIV 731

Query: 799  RGKSFQQVKHIAISLEAESGGLLISVDKTNKGYAIIIYRGKNYQRPRAVRPKNLLTRRQA 620
            +GK+F QVKHIAISLEAESGG+L+SVD+T KGYAII+YRGKNYQRP A+RPKNLLT+RQA
Sbjct: 732  KGKNFAQVKHIAISLEAESGGVLVSVDRTPKGYAIIVYRGKNYQRPHALRPKNLLTKRQA 791

Query: 619  LARSIELQRREALLHHISSLRDRIELLKAELDQMESAKETGNEELYRRLNDALNXXXXXX 440
            LARSIELQR EAL HHIS L +RI+LLK+  ++M++     ++  Y RL+   +      
Sbjct: 792  LARSIELQRHEALKHHISDLEERIKLLKSLPEEMKTGNGIDDKAFYSRLDGTYS---TDE 848

Query: 439  XXXXXXXXXVYLKTYDSADEGSGYPN 362
                      YL+ Y S D+GS   N
Sbjct: 849  DMEEDEGEEAYLEIYGSEDKGSNIQN 874


>emb|CBI27903.3| unnamed protein product [Vitis vinifera]
          Length = 881

 Score =  720 bits (1859), Expect = 0.0
 Identities = 374/566 (66%), Positives = 450/566 (79%), Gaps = 1/566 (0%)
 Frame = -1

Query: 2056 VKFEGPPASNMKRTHEILENRSGGLVIWRSGSSLVLYRGLAYKLRCVRTYNNLNQCHQDI 1877
            +KFEGP + NMKRTHEILE R+GGLVIWR+GSS+VLYRG+AYKL CV++Y    + + +I
Sbjct: 310  LKFEGPSSCNMKRTHEILETRTGGLVIWRTGSSVVLYRGMAYKLHCVQSYIKQERDNVNI 369

Query: 1876 VNPLKDPNSYVAGDDGVNNSLRSTKSSVTGSS-LPKDLSEKEQNDMSVLNNLLDGLGPRF 1700
                +D  + +  D GV + +++T+S ++ S+   KDLSE+E  D+S LN+LLD LGPRF
Sbjct: 370  SEYSQDAANVIIQDIGVKDIVKTTESVISDSARYLKDLSEEELMDLSELNHLLDELGPRF 429

Query: 1699 KDWSGCNPQPVDADLLPGVVPGYAPPFRLLPYGVKYSLRNKEMTFYRRRARVMPPHFALG 1520
            KDWSG  P PVDADLLP VV  Y PPFRLLPYG+++ LRN+EMTF RR AR MPPHFALG
Sbjct: 430  KDWSGREPLPVDADLLPSVVHEYKPPFRLLPYGMRHCLRNREMTFIRRLARTMPPHFALG 489

Query: 1519 RNRELQGLAQAMVKLWQRNAIAKIAIKRGVLNTCNERMAEELKKLTGGTLVSRNKDYIVF 1340
            R+RELQGLA AMVKLW+R+AIAKIAIKRGV NTCN+RMAEELK LTGGTLVSRNKDYIVF
Sbjct: 490  RSRELQGLAMAMVKLWERSAIAKIAIKRGVQNTCNDRMAEELKNLTGGTLVSRNKDYIVF 549

Query: 1339 YRGNDFLSPNVTEALLERQKLVELQQDEEELARQRASSVLNVSNAKAAKFPLVAGTLAET 1160
            YRGNDFL P+V EAL ER+KL +LQQDEEE AR RAS++++ S A++AK PLVAGTLAET
Sbjct: 550  YRGNDFLPPHVMEALKERRKLRDLQQDEEEQARHRASALID-SKARSAKGPLVAGTLAET 608

Query: 1159 TAANSRWGNEPSGEDIEKMKRDFALTKHASVVRCLENKLTLAQQKFKKAERALTKVQEFL 980
             AA SRWG+EPS ED+ KM RD AL +HAS+VR +  KL  A+ K KK E+AL KVQE L
Sbjct: 609  LAATSRWGSEPSEEDVGKMIRDSALARHASLVRYVGKKLAHAKAKLKKTEKALRKVQEDL 668

Query: 979  KPTELPTDLETISDEERFLYRKIGLSMKPFLLLGRRGVFDGTVENIHLHWKFRELVKIIV 800
            +P ELP DLET+SDEERFL+RKIGLSMKPFLLLG RG+FDGTVEN+HLHWK+RELVKIIV
Sbjct: 669  EPAELPMDLETLSDEERFLFRKIGLSMKPFLLLGTRGIFDGTVENMHLHWKYRELVKIIV 728

Query: 799  RGKSFQQVKHIAISLEAESGGLLISVDKTNKGYAIIIYRGKNYQRPRAVRPKNLLTRRQA 620
            +GK+F QVKHIAISLEAESGG+L+SVD+T KGYAII+YRGKNYQRP A+RPKNLLT+RQA
Sbjct: 729  KGKNFAQVKHIAISLEAESGGVLVSVDRTPKGYAIIVYRGKNYQRPHALRPKNLLTKRQA 788

Query: 619  LARSIELQRREALLHHISSLRDRIELLKAELDQMESAKETGNEELYRRLNDALNXXXXXX 440
            LARSIELQR EAL HHIS L +RI+LLK+  ++M++     ++  Y RL+   +      
Sbjct: 789  LARSIELQRHEALKHHISDLEERIKLLKSLPEEMKTGNGIDDKAFYSRLDGTYS---TDE 845

Query: 439  XXXXXXXXXVYLKTYDSADEGSGYPN 362
                      YL+ Y S D+GS   N
Sbjct: 846  DMEEDEGEEAYLEIYGSEDKGSNIQN 871


>ref|XP_007012812.1| CRS1 / YhbY domain-containing protein, putative isoform 1 [Theobroma
            cacao] gi|590575888|ref|XP_007012813.1| CRS1 / YhbY
            domain-containing protein, putative isoform 1 [Theobroma
            cacao] gi|590575892|ref|XP_007012814.1| CRS1 / YhbY
            domain-containing protein, putative isoform 1 [Theobroma
            cacao] gi|508783175|gb|EOY30431.1| CRS1 / YhbY
            domain-containing protein, putative isoform 1 [Theobroma
            cacao] gi|508783176|gb|EOY30432.1| CRS1 / YhbY
            domain-containing protein, putative isoform 1 [Theobroma
            cacao] gi|508783177|gb|EOY30433.1| CRS1 / YhbY
            domain-containing protein, putative isoform 1 [Theobroma
            cacao]
          Length = 873

 Score =  696 bits (1795), Expect = 0.0
 Identities = 360/561 (64%), Positives = 448/561 (79%), Gaps = 2/561 (0%)
 Frame = -1

Query: 2056 VKFEGPPASNMKRTHEILENRSGGLVIWRSGSSLVLYRGLAYKLRCVRTYNNLNQCHQDI 1877
            +KFE P + NMKRTHEILE R+GGLVIWRSGSSLVLYRG+AYKL CV++Y + N+   + 
Sbjct: 308  LKFEEPLSLNMKRTHEILEQRTGGLVIWRSGSSLVLYRGMAYKLHCVQSYTSQNKVDMNA 367

Query: 1876 VNPLKDPNSYVAGDDGVNNSLRSTKSSVTGSS-LPKDLSEKEQNDMSVLNNLLDGLGPRF 1700
            ++   +  S    +  V  S+R+ +  +  SS   KDLS++E  D+  LN+LLD LGPR+
Sbjct: 368  LDCSTNVESDTTQNIVVKESVRTMECFMPSSSEYLKDLSKEELMDLCELNHLLDELGPRY 427

Query: 1699 KDWSGCNPQPVDADLLPGVVPGYAPPFRLLPYGVKYSLRNKEMTFYRRRARVMPPHFALG 1520
            KDWSG  P PVDADLLP VVPGY PPFR LPYG+++ L++ EMT +RR AR +PPHFALG
Sbjct: 428  KDWSGREPLPVDADLLPPVVPGYQPPFRRLPYGIRHCLKDHEMTTFRRLARTVPPHFALG 487

Query: 1519 RNRELQGLAQAMVKLWQRNAIAKIAIKRGVLNTCNERMAEELKKLTGGTLVSRNKDYIVF 1340
            RNRELQGLA+A+VKLW+ +AIAKIAIKRGV NT NERMAEELK+LTGGTL+SRNK++IVF
Sbjct: 488  RNRELQGLAEAIVKLWESSAIAKIAIKRGVQNTRNERMAEELKQLTGGTLLSRNKEFIVF 547

Query: 1339 YRGNDFLSPNVTEALLERQKLVELQQDEEELARQRASSVLNVSNAKAAKFPLVAGTLAET 1160
            YRGNDFL P VT+ L ERQK   LQQ+EEE AR+R  +++  SNAKA+K PLVAGTLAET
Sbjct: 548  YRGNDFLPPVVTKTLKERQKSRNLQQEEEEKARERVLALVG-SNAKASKLPLVAGTLAET 606

Query: 1159 TAANSRWGNEPSGEDIEKMKRDFALTKHASVVRCLENKLTLAQQKFKKAERALTKVQEFL 980
            TAA SRWG++PS E++E+MK++ ALT+ AS+VR LE KL LA  K +KA +AL KVQ+ L
Sbjct: 607  TAATSRWGHQPSIEEVEEMKKNSALTQQASLVRYLEKKLALAIGKLRKANKALAKVQKHL 666

Query: 979  KPTELPTDLETISDEERFLYRKIGLSMKPFLLLGRRGVFDGTVENIHLHWKFRELVKIIV 800
            +P +LPTDLET+SDEER L+RKIGLSMKP+LLLGRRGV+DGT+EN+HLHWK+RELVKIIV
Sbjct: 667  EPADLPTDLETLSDEERILFRKIGLSMKPYLLLGRRGVYDGTIENMHLHWKYRELVKIIV 726

Query: 799  RGKSFQQVKHIAISLEAESGGLLISVDKTNKGYAIIIYRGKNYQRPRAVRPKNLLTRRQA 620
            +G++F QVKHIAISLEAESGGLL+S+DKT KGYAIIIYRGKNY RP  +RPKNLLTRRQA
Sbjct: 727  KGENFAQVKHIAISLEAESGGLLVSLDKTTKGYAIIIYRGKNYMRPCVLRPKNLLTRRQA 786

Query: 619  LARSIELQRREALLHHISSLRDRIELLKAELDQMESAKETG-NEELYRRLNDALNXXXXX 443
            LARS+ELQRREAL HH+  L+++IEL+K+EL++M++ KE   ++  Y RLN A       
Sbjct: 787  LARSVELQRREALKHHVLDLQEKIELMKSELEEMKTGKEIDVDKTSYSRLNKA---PLFD 843

Query: 442  XXXXXXXXXXVYLKTYDSADE 380
                       YL+TYDS+++
Sbjct: 844  EDIEEGEWEEEYLETYDSSED 864


>ref|XP_007012816.1| CRS1 / YhbY domain-containing protein, putative isoform 5 [Theobroma
            cacao] gi|590575903|ref|XP_007012817.1| CRS1 / YhbY
            domain-containing protein, putative isoform 5 [Theobroma
            cacao] gi|508783179|gb|EOY30435.1| CRS1 / YhbY
            domain-containing protein, putative isoform 5 [Theobroma
            cacao] gi|508783180|gb|EOY30436.1| CRS1 / YhbY
            domain-containing protein, putative isoform 5 [Theobroma
            cacao]
          Length = 822

 Score =  680 bits (1755), Expect = 0.0
 Identities = 346/511 (67%), Positives = 424/511 (82%), Gaps = 1/511 (0%)
 Frame = -1

Query: 2056 VKFEGPPASNMKRTHEILENRSGGLVIWRSGSSLVLYRGLAYKLRCVRTYNNLNQCHQDI 1877
            +KFE P + NMKRTHEILE R+GGLVIWRSGSSLVLYRG+AYKL CV++Y + N+   + 
Sbjct: 308  LKFEEPLSLNMKRTHEILEQRTGGLVIWRSGSSLVLYRGMAYKLHCVQSYTSQNKVDMNA 367

Query: 1876 VNPLKDPNSYVAGDDGVNNSLRSTKSSVTGSS-LPKDLSEKEQNDMSVLNNLLDGLGPRF 1700
            ++   +  S    +  V  S+R+ +  +  SS   KDLS++E  D+  LN+LLD LGPR+
Sbjct: 368  LDCSTNVESDTTQNIVVKESVRTMECFMPSSSEYLKDLSKEELMDLCELNHLLDELGPRY 427

Query: 1699 KDWSGCNPQPVDADLLPGVVPGYAPPFRLLPYGVKYSLRNKEMTFYRRRARVMPPHFALG 1520
            KDWSG  P PVDADLLP VVPGY PPFR LPYG+++ L++ EMT +RR AR +PPHFALG
Sbjct: 428  KDWSGREPLPVDADLLPPVVPGYQPPFRRLPYGIRHCLKDHEMTTFRRLARTVPPHFALG 487

Query: 1519 RNRELQGLAQAMVKLWQRNAIAKIAIKRGVLNTCNERMAEELKKLTGGTLVSRNKDYIVF 1340
            RNRELQGLA+A+VKLW+ +AIAKIAIKRGV NT NERMAEELK+LTGGTL+SRNK++IVF
Sbjct: 488  RNRELQGLAEAIVKLWESSAIAKIAIKRGVQNTRNERMAEELKQLTGGTLLSRNKEFIVF 547

Query: 1339 YRGNDFLSPNVTEALLERQKLVELQQDEEELARQRASSVLNVSNAKAAKFPLVAGTLAET 1160
            YRGNDFL P VT+ L ERQK   LQQ+EEE AR+R  +++  SNAKA+K PLVAGTLAET
Sbjct: 548  YRGNDFLPPVVTKTLKERQKSRNLQQEEEEKARERVLALVG-SNAKASKLPLVAGTLAET 606

Query: 1159 TAANSRWGNEPSGEDIEKMKRDFALTKHASVVRCLENKLTLAQQKFKKAERALTKVQEFL 980
            TAA SRWG++PS E++E+MK++ ALT+ AS+VR LE KL LA  K +KA +AL KVQ+ L
Sbjct: 607  TAATSRWGHQPSIEEVEEMKKNSALTQQASLVRYLEKKLALAIGKLRKANKALAKVQKHL 666

Query: 979  KPTELPTDLETISDEERFLYRKIGLSMKPFLLLGRRGVFDGTVENIHLHWKFRELVKIIV 800
            +P +LPTDLET+SDEER L+RKIGLSMKP+LLLGRRGV+DGT+EN+HLHWK+RELVKIIV
Sbjct: 667  EPADLPTDLETLSDEERILFRKIGLSMKPYLLLGRRGVYDGTIENMHLHWKYRELVKIIV 726

Query: 799  RGKSFQQVKHIAISLEAESGGLLISVDKTNKGYAIIIYRGKNYQRPRAVRPKNLLTRRQA 620
            +G++F QVKHIAISLEAESGGLL+S+DKT KGYAIIIYRGKNY RP  +RPKNLLTRRQA
Sbjct: 727  KGENFAQVKHIAISLEAESGGLLVSLDKTTKGYAIIIYRGKNYMRPCVLRPKNLLTRRQA 786

Query: 619  LARSIELQRREALLHHISSLRDRIELLKAEL 527
            LARS+ELQRREAL HH+  L+++IEL+K+EL
Sbjct: 787  LARSVELQRREALKHHVLDLQEKIELMKSEL 817


>ref|XP_007012815.1| CRS1 / YhbY domain-containing protein, putative isoform 4 [Theobroma
            cacao] gi|508783178|gb|EOY30434.1| CRS1 / YhbY
            domain-containing protein, putative isoform 4 [Theobroma
            cacao]
          Length = 818

 Score =  680 bits (1755), Expect = 0.0
 Identities = 346/511 (67%), Positives = 424/511 (82%), Gaps = 1/511 (0%)
 Frame = -1

Query: 2056 VKFEGPPASNMKRTHEILENRSGGLVIWRSGSSLVLYRGLAYKLRCVRTYNNLNQCHQDI 1877
            +KFE P + NMKRTHEILE R+GGLVIWRSGSSLVLYRG+AYKL CV++Y + N+   + 
Sbjct: 308  LKFEEPLSLNMKRTHEILEQRTGGLVIWRSGSSLVLYRGMAYKLHCVQSYTSQNKVDMNA 367

Query: 1876 VNPLKDPNSYVAGDDGVNNSLRSTKSSVTGSS-LPKDLSEKEQNDMSVLNNLLDGLGPRF 1700
            ++   +  S    +  V  S+R+ +  +  SS   KDLS++E  D+  LN+LLD LGPR+
Sbjct: 368  LDCSTNVESDTTQNIVVKESVRTMECFMPSSSEYLKDLSKEELMDLCELNHLLDELGPRY 427

Query: 1699 KDWSGCNPQPVDADLLPGVVPGYAPPFRLLPYGVKYSLRNKEMTFYRRRARVMPPHFALG 1520
            KDWSG  P PVDADLLP VVPGY PPFR LPYG+++ L++ EMT +RR AR +PPHFALG
Sbjct: 428  KDWSGREPLPVDADLLPPVVPGYQPPFRRLPYGIRHCLKDHEMTTFRRLARTVPPHFALG 487

Query: 1519 RNRELQGLAQAMVKLWQRNAIAKIAIKRGVLNTCNERMAEELKKLTGGTLVSRNKDYIVF 1340
            RNRELQGLA+A+VKLW+ +AIAKIAIKRGV NT NERMAEELK+LTGGTL+SRNK++IVF
Sbjct: 488  RNRELQGLAEAIVKLWESSAIAKIAIKRGVQNTRNERMAEELKQLTGGTLLSRNKEFIVF 547

Query: 1339 YRGNDFLSPNVTEALLERQKLVELQQDEEELARQRASSVLNVSNAKAAKFPLVAGTLAET 1160
            YRGNDFL P VT+ L ERQK   LQQ+EEE AR+R  +++  SNAKA+K PLVAGTLAET
Sbjct: 548  YRGNDFLPPVVTKTLKERQKSRNLQQEEEEKARERVLALVG-SNAKASKLPLVAGTLAET 606

Query: 1159 TAANSRWGNEPSGEDIEKMKRDFALTKHASVVRCLENKLTLAQQKFKKAERALTKVQEFL 980
            TAA SRWG++PS E++E+MK++ ALT+ AS+VR LE KL LA  K +KA +AL KVQ+ L
Sbjct: 607  TAATSRWGHQPSIEEVEEMKKNSALTQQASLVRYLEKKLALAIGKLRKANKALAKVQKHL 666

Query: 979  KPTELPTDLETISDEERFLYRKIGLSMKPFLLLGRRGVFDGTVENIHLHWKFRELVKIIV 800
            +P +LPTDLET+SDEER L+RKIGLSMKP+LLLGRRGV+DGT+EN+HLHWK+RELVKIIV
Sbjct: 667  EPADLPTDLETLSDEERILFRKIGLSMKPYLLLGRRGVYDGTIENMHLHWKYRELVKIIV 726

Query: 799  RGKSFQQVKHIAISLEAESGGLLISVDKTNKGYAIIIYRGKNYQRPRAVRPKNLLTRRQA 620
            +G++F QVKHIAISLEAESGGLL+S+DKT KGYAIIIYRGKNY RP  +RPKNLLTRRQA
Sbjct: 727  KGENFAQVKHIAISLEAESGGLLVSLDKTTKGYAIIIYRGKNYMRPCVLRPKNLLTRRQA 786

Query: 619  LARSIELQRREALLHHISSLRDRIELLKAEL 527
            LARS+ELQRREAL HH+  L+++IEL+K+EL
Sbjct: 787  LARSVELQRREALKHHVLDLQEKIELMKSEL 817


>ref|XP_004243753.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Solanum lycopersicum]
          Length = 812

 Score =  676 bits (1745), Expect = 0.0
 Identities = 348/529 (65%), Positives = 423/529 (79%)
 Frame = -1

Query: 2056 VKFEGPPASNMKRTHEILENRSGGLVIWRSGSSLVLYRGLAYKLRCVRTYNNLNQCHQDI 1877
            ++FEG P+ NMKRTH+ILE+R+GGLVIWRSGSS+VLYRG++YKL CV+++ + N      
Sbjct: 274  LRFEGAPSHNMKRTHDILEHRTGGLVIWRSGSSIVLYRGISYKLPCVQSFTSKNHD---- 329

Query: 1876 VNPLKDPNSYVAGDDGVNNSLRSTKSSVTGSSLPKDLSEKEQNDMSVLNNLLDGLGPRFK 1697
            VN  + PN+      GV     + +    GS+   DLS +E  D+S LN +LD +GPRFK
Sbjct: 330  VNESEYPNNDSCQSLGVKCLNEAVERPRNGST---DLSGEEIVDLSELNMILDEVGPRFK 386

Query: 1696 DWSGCNPQPVDADLLPGVVPGYAPPFRLLPYGVKYSLRNKEMTFYRRRARVMPPHFALGR 1517
            DWSG  P PVDADLLP VVPGY PPFR LPYG K +L+NKEMT+ RR AR+MPPHFALGR
Sbjct: 387  DWSGRGPMPVDADLLPAVVPGYRPPFRRLPYGAKLNLKNKEMTYLRRTARIMPPHFALGR 446

Query: 1516 NRELQGLAQAMVKLWQRNAIAKIAIKRGVLNTCNERMAEELKKLTGGTLVSRNKDYIVFY 1337
            NR+LQGLA AMVKLW+R+AIAKIAIKRGVLNT NERMAEELK LTGGTL+SRNKDYIVFY
Sbjct: 447  NRQLQGLAAAMVKLWRRSAIAKIAIKRGVLNTSNERMAEELKVLTGGTLLSRNKDYIVFY 506

Query: 1336 RGNDFLSPNVTEALLERQKLVELQQDEEELARQRASSVLNVSNAKAAKFPLVAGTLAETT 1157
            RGNDFLSP VTEAL E ++  +  QD+EE ARQRA++ ++ S+ +A K PLVAGTL+ET 
Sbjct: 507  RGNDFLSPRVTEALEEAERKSDFLQDQEEQARQRAATSID-SDTRAPKRPLVAGTLSETM 565

Query: 1156 AANSRWGNEPSGEDIEKMKRDFALTKHASVVRCLENKLTLAQQKFKKAERALTKVQEFLK 977
            AA SRWGN+PS E+ EKM RD A+ +HAS+V+ L+ KL LA+ K KKAE  L K+QE  +
Sbjct: 566  AATSRWGNQPSIEEREKMLRDAAVARHASLVKYLDEKLALAKGKVKKAENMLRKLQENRE 625

Query: 976  PTELPTDLETISDEERFLYRKIGLSMKPFLLLGRRGVFDGTVENIHLHWKFRELVKIIVR 797
            P+ELPTDLE +S EERFL+RK+GLSMKPFLLLGRR VFDGT+ENIHLHWK+RELVKII  
Sbjct: 626  PSELPTDLEILSAEERFLFRKMGLSMKPFLLLGRRDVFDGTIENIHLHWKYRELVKIIAE 685

Query: 796  GKSFQQVKHIAISLEAESGGLLISVDKTNKGYAIIIYRGKNYQRPRAVRPKNLLTRRQAL 617
             ++  Q+KHIAI+LEAESGGLL+S+DKT +GYAII+YRGKNYQRP   RPKNLLT+RQAL
Sbjct: 686  RRNAAQIKHIAITLEAESGGLLVSIDKTTQGYAIILYRGKNYQRPNEFRPKNLLTKRQAL 745

Query: 616  ARSIELQRREALLHHISSLRDRIELLKAELDQMESAKETGNEELYRRLN 470
            ARSIELQRREAL HHI+ L+D+I+ LK+EL+  E  +E   E L+ RL+
Sbjct: 746  ARSIELQRREALKHHITELQDKIQNLKSELEDTEMVEEIDEETLFSRLD 794


>ref|XP_002309217.2| hypothetical protein POPTR_0006s15340g [Populus trichocarpa]
            gi|550336383|gb|EEE92740.2| hypothetical protein
            POPTR_0006s15340g [Populus trichocarpa]
          Length = 977

 Score =  674 bits (1740), Expect = 0.0
 Identities = 345/533 (64%), Positives = 420/533 (78%), Gaps = 2/533 (0%)
 Frame = -1

Query: 2056 VKFEGPPASNMKRTHEILENRSGGLVIWRSGSSLVLYRGLAYKLRCVRTYNNLNQCHQDI 1877
            +KFE P + NMKRTHEILE+R+GGL+IWRSGSS+V+YRG  YK +CV++Y   N+   D+
Sbjct: 410  LKFEWPLSCNMKRTHEILESRTGGLIIWRSGSSVVMYRGTTYKFQCVQSYTKQNEAGMDV 469

Query: 1876 VNPLKDPNSYVAGDDGVNNSLRSTKSSVTGSS-LPKDLSEKEQNDMSVLNNLLDGLGPRF 1700
            +   ++  +      G+ +  R+ +S +  ++   KDLS++E  D S LN+LLD LGPR+
Sbjct: 470  LQYAEEATNSATSSAGMKDLARTMESIIPDAAKYLKDLSQEELMDFSELNHLLDELGPRY 529

Query: 1699 KDWSGCNPQPVDADLLPGVVPGYAPPFRLLPYGVKYSLRNKEMTFYRRRARVMPPHFALG 1520
            KDW G  P PVDADLLP VVPGY  P RLLPYGVK  L NK  T +RR AR  PPHF LG
Sbjct: 530  KDWCGREPLPVDADLLPAVVPGYKSPLRLLPYGVKPCLSNKNTTNFRRLARTTPPHFVLG 589

Query: 1519 RNRELQGLAQAMVKLWQRNAIAKIAIKRGVLNTCNERMAEELKKLTGGTLVSRNKDYIVF 1340
            RNRELQGLA AMVKLW+R+AIAKIAIKRGV  T NE MAEELK+LTGGTL+SRNK+YIVF
Sbjct: 590  RNRELQGLANAMVKLWERSAIAKIAIKRGVQYTRNEIMAEELKRLTGGTLLSRNKEYIVF 649

Query: 1339 YRGNDFLSPNVTEALLERQKLVELQQDEEELARQRASSVLNVSNAKAAKFPLVAGTLAET 1160
            YRGNDFL P + E L ER+KL  L QDEE+ ARQ  S+ +  S+ K  K PLVAGTL ET
Sbjct: 650  YRGNDFLPPVINETLKERRKLAFLYQDEEDQARQMTSAFIG-SSVKTTKGPLVAGTLVET 708

Query: 1159 TAANSRWGNEPSGEDIEKMKRDFALTKHASVVRCLENKLTLAQQKFKKAERALTKVQEFL 980
             AA SRWGN+PS ED+E+M RD AL +HAS+V+ LENKL  A+ K KK+E+ L KVQE L
Sbjct: 709  VAAISRWGNQPSSEDVEEMIRDSALARHASLVKHLENKLAQAKGKLKKSEKDLAKVQENL 768

Query: 979  KPTELPTDLETISDEERFLYRKIGLSMKPFLLLGRRGVFDGTVENIHLHWKFRELVKIIV 800
            +PTELPTDLETISDEERFL+RKIGLSMKP+L LGRRGVFDGT+EN+HLHWK+RELVKIIV
Sbjct: 769  EPTELPTDLETISDEERFLFRKIGLSMKPYLFLGRRGVFDGTIENMHLHWKYRELVKIIV 828

Query: 799  RGKSFQQVKHIAISLEAESGGLLISVDKTNKGYAIIIYRGKNYQRPRAVRPKNLLTRRQA 620
              K   QVKHIAISLEAESGG+L+SVD+T KGYAII+YRGKNY RP+A+RP+NLLTRRQA
Sbjct: 829  ERKGIAQVKHIAISLEAESGGVLVSVDRTTKGYAIIVYRGKNYMRPQAMRPENLLTRRQA 888

Query: 619  LARSIELQRREALLHHISSLRDRIELLKAELDQMESAKETG-NEELYRRLNDA 464
            LARS+ELQR EAL HHI+ L++RIEL+ +EL++ME+ K++   + LY + +DA
Sbjct: 889  LARSVELQRYEALKHHITDLQERIELVTSELEEMEADKKSEVYKALYSKFDDA 941


>ref|XP_004171699.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like, partial [Cucumis sativus]
          Length = 789

 Score =  674 bits (1740), Expect = 0.0
 Identities = 345/522 (66%), Positives = 413/522 (79%), Gaps = 5/522 (0%)
 Frame = -1

Query: 2056 VKFEGPPASNMKRTHEILENRSGGLVIWRSGSSLVLYRGLAYKLRCVRTYNNLNQCHQDI 1877
            +KFEGP   NMKR HE LENR+GGLVIWRSGS +VLYRG+ Y L CV++Y   NQ     
Sbjct: 267  LKFEGPLTVNMKRAHEKLENRTGGLVIWRSGSLIVLYRGMTYHLPCVQSYAKQNQAKS-- 324

Query: 1876 VNPLKDPNSYVAGDDGVNNSLRSTKSSVT-----GSSLPKDLSEKEQNDMSVLNNLLDGL 1712
             N L  PN+  + D   N  L +T  +++      S   K LS+KE  ++S LN+LLD +
Sbjct: 325  -NTLDVPNNVESDDITRNEKLHTTVGTMSTIVSGASKHTKTLSKKELMELSDLNHLLDEI 383

Query: 1711 GPRFKDWSGCNPQPVDADLLPGVVPGYAPPFRLLPYGVKYSLRNKEMTFYRRRARVMPPH 1532
            GPRFKDWSGC P PVDADLLPG+VPGY PP R+LPYGV++ LRNKE+T +RR AR MPPH
Sbjct: 384  GPRFKDWSGCEPVPVDADLLPGIVPGYKPPTRILPYGVRHCLRNKEVTIFRRLARKMPPH 443

Query: 1531 FALGRNRELQGLAQAMVKLWQRNAIAKIAIKRGVLNTCNERMAEELKKLTGGTLVSRNKD 1352
            FALGRNR+LQGLA AMVKLW++ AIAKIAIKRGV NT NERMAEEL+ LTGGTL+SRNK+
Sbjct: 444  FALGRNRQLQGLANAMVKLWEKCAIAKIAIKRGVENTRNERMAEELRILTGGTLLSRNKE 503

Query: 1351 YIVFYRGNDFLSPNVTEALLERQKLVELQQDEEELARQRASSVLNVSNAKAAKFPLVAGT 1172
            YIVFYRGND+L P +TEAL ER+KL + QQD EE  RQ AS+ +  S  KA+  PLVAGT
Sbjct: 504  YIVFYRGNDYLPPTITEALKERRKLADRQQDVEEQVRQVASAAIE-SKVKASNAPLVAGT 562

Query: 1171 LAETTAANSRWGNEPSGEDIEKMKRDFALTKHASVVRCLENKLTLAQQKFKKAERALTKV 992
            L ET AA SRWG++PSG DIE M+ D AL K  S++  L+ KL LA+ K K AE+ + K+
Sbjct: 563  LTETIAATSRWGSQPSGHDIENMREDSALAKLDSLIEYLKKKLALAKCKVKNAEKIIAKL 622

Query: 991  QEFLKPTELPTDLETISDEERFLYRKIGLSMKPFLLLGRRGVFDGTVENIHLHWKFRELV 812
            QE  +P++LPTDLETI+DEER L+RKIGLSMKP+LLLGRRGV+DGTVEN+HLHWKFRELV
Sbjct: 623  QEKKEPSDLPTDLETITDEERLLFRKIGLSMKPYLLLGRRGVYDGTVENMHLHWKFRELV 682

Query: 811  KIIVRGKSFQQVKHIAISLEAESGGLLISVDKTNKGYAIIIYRGKNYQRPRAVRPKNLLT 632
            KIIVRGK+ QQVKH+AISLEAES G++IS+DKT KGY +I+YRGKNY RP A+RPKN+LT
Sbjct: 683  KIIVRGKTLQQVKHVAISLEAESNGVVISLDKTTKGYEVIVYRGKNYTRPDAMRPKNMLT 742

Query: 631  RRQALARSIELQRREALLHHISSLRDRIELLKAELDQMESAK 506
            RRQALARSIELQRREAL HHI  L ++IELLKAEL++ +S K
Sbjct: 743  RRQALARSIELQRREALKHHILDLEEKIELLKAELEERKSGK 784


>ref|XP_004144114.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Cucumis sativus]
          Length = 846

 Score =  674 bits (1740), Expect = 0.0
 Identities = 345/522 (66%), Positives = 413/522 (79%), Gaps = 5/522 (0%)
 Frame = -1

Query: 2056 VKFEGPPASNMKRTHEILENRSGGLVIWRSGSSLVLYRGLAYKLRCVRTYNNLNQCHQDI 1877
            +KFEGP   NMKR HE LENR+GGLVIWRSGS +VLYRG+ Y L CV++Y   NQ     
Sbjct: 324  LKFEGPLTVNMKRAHEKLENRTGGLVIWRSGSLIVLYRGMTYHLPCVQSYAKQNQAKS-- 381

Query: 1876 VNPLKDPNSYVAGDDGVNNSLRSTKSSVT-----GSSLPKDLSEKEQNDMSVLNNLLDGL 1712
             N L  PN+  + D   N  L +T  +++      S   K LS+KE  ++S LN+LLD +
Sbjct: 382  -NTLDVPNNVESDDITRNEKLHTTVGTMSTIVSGASKHTKTLSKKELMELSDLNHLLDEI 440

Query: 1711 GPRFKDWSGCNPQPVDADLLPGVVPGYAPPFRLLPYGVKYSLRNKEMTFYRRRARVMPPH 1532
            GPRFKDWSGC P PVDADLLPG+VPGY PP R+LPYGV++ LRNKE+T +RR AR MPPH
Sbjct: 441  GPRFKDWSGCEPVPVDADLLPGIVPGYKPPTRILPYGVRHCLRNKEVTIFRRLARKMPPH 500

Query: 1531 FALGRNRELQGLAQAMVKLWQRNAIAKIAIKRGVLNTCNERMAEELKKLTGGTLVSRNKD 1352
            FALGRNR+LQGLA AMVKLW++ AIAKIAIKRGV NT NERMAEEL+ LTGGTL+SRNK+
Sbjct: 501  FALGRNRQLQGLANAMVKLWEKCAIAKIAIKRGVENTRNERMAEELRILTGGTLLSRNKE 560

Query: 1351 YIVFYRGNDFLSPNVTEALLERQKLVELQQDEEELARQRASSVLNVSNAKAAKFPLVAGT 1172
            YIVFYRGND+L P +TEAL ER+KL + QQD EE  RQ AS+ +  S  KA+  PLVAGT
Sbjct: 561  YIVFYRGNDYLPPTITEALKERRKLADRQQDVEEQVRQVASAAIE-SKVKASNAPLVAGT 619

Query: 1171 LAETTAANSRWGNEPSGEDIEKMKRDFALTKHASVVRCLENKLTLAQQKFKKAERALTKV 992
            L ET AA SRWG++PSG DIE M+ D AL K  S++  L+ KL LA+ K K AE+ + K+
Sbjct: 620  LTETIAATSRWGSQPSGHDIENMREDSALAKLDSLIEYLKKKLALAKCKVKNAEKIIAKL 679

Query: 991  QEFLKPTELPTDLETISDEERFLYRKIGLSMKPFLLLGRRGVFDGTVENIHLHWKFRELV 812
            QE  +P++LPTDLETI+DEER L+RKIGLSMKP+LLLGRRGV+DGTVEN+HLHWKFRELV
Sbjct: 680  QEKKEPSDLPTDLETITDEERLLFRKIGLSMKPYLLLGRRGVYDGTVENMHLHWKFRELV 739

Query: 811  KIIVRGKSFQQVKHIAISLEAESGGLLISVDKTNKGYAIIIYRGKNYQRPRAVRPKNLLT 632
            KIIVRGK+ QQVKH+AISLEAES G++IS+DKT KGY +I+YRGKNY RP A+RPKN+LT
Sbjct: 740  KIIVRGKTLQQVKHVAISLEAESNGVVISLDKTTKGYEVIVYRGKNYTRPDAMRPKNMLT 799

Query: 631  RRQALARSIELQRREALLHHISSLRDRIELLKAELDQMESAK 506
            RRQALARSIELQRREAL HHI  L ++IELLKAEL++ +S K
Sbjct: 800  RRQALARSIELQRREALKHHILDLEEKIELLKAELEERKSGK 841


>ref|XP_006357699.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like isoform X1 [Solanum tuberosum]
            gi|565382761|ref|XP_006357700.1| PREDICTED: chloroplastic
            group IIA intron splicing facilitator CRS1,
            chloroplastic-like isoform X2 [Solanum tuberosum]
          Length = 820

 Score =  673 bits (1737), Expect = 0.0
 Identities = 346/529 (65%), Positives = 422/529 (79%)
 Frame = -1

Query: 2056 VKFEGPPASNMKRTHEILENRSGGLVIWRSGSSLVLYRGLAYKLRCVRTYNNLNQCHQDI 1877
            ++FEGPP+ NMKRTH+ILE+R+GGLVIWRSGSS+VLYRG++YKL CV+++ + N      
Sbjct: 282  LRFEGPPSHNMKRTHDILEHRTGGLVIWRSGSSIVLYRGISYKLPCVQSFTSKNHD---- 337

Query: 1876 VNPLKDPNSYVAGDDGVNNSLRSTKSSVTGSSLPKDLSEKEQNDMSVLNNLLDGLGPRFK 1697
            V+  + PN+      GV     + +    GS+   DLS +E  D+S LN +LD +GPRFK
Sbjct: 338  VDESEYPNNDSCQSLGVKCLNEAAERPRNGST---DLSSEEIVDLSELNMILDEVGPRFK 394

Query: 1696 DWSGCNPQPVDADLLPGVVPGYAPPFRLLPYGVKYSLRNKEMTFYRRRARVMPPHFALGR 1517
            DWSG  P PVDADLLP VVPGY PPFR LPYG K +L+NKEMT+ RR AR+MPPHFALGR
Sbjct: 395  DWSGREPLPVDADLLPAVVPGYRPPFRRLPYGAKLNLKNKEMTYLRRTARIMPPHFALGR 454

Query: 1516 NRELQGLAQAMVKLWQRNAIAKIAIKRGVLNTCNERMAEELKKLTGGTLVSRNKDYIVFY 1337
            NR+LQGLA AMVKLW+R+AIAKIAIKRGVLNT NERM+EELK LTGGTL+SRNKDYIVFY
Sbjct: 455  NRQLQGLAAAMVKLWRRSAIAKIAIKRGVLNTSNERMSEELKVLTGGTLLSRNKDYIVFY 514

Query: 1336 RGNDFLSPNVTEALLERQKLVELQQDEEELARQRASSVLNVSNAKAAKFPLVAGTLAETT 1157
            RGNDFL P VTEAL E ++  +  QD+EE ARQRA + ++ S+ +A K PLVAGTL+ET 
Sbjct: 515  RGNDFLPPRVTEALEEAERKSDFLQDQEEQARQRAVTSID-SDTRAPKRPLVAGTLSETM 573

Query: 1156 AANSRWGNEPSGEDIEKMKRDFALTKHASVVRCLENKLTLAQQKFKKAERALTKVQEFLK 977
            AA SRWGN+PS E+ EKM RD A+ +HAS+V+ LE KL LA+ K KKAE  L K+QE  +
Sbjct: 574  AATSRWGNQPSIEEREKMMRDAAVARHASLVKYLEEKLALAKGKVKKAENMLRKLQENRE 633

Query: 976  PTELPTDLETISDEERFLYRKIGLSMKPFLLLGRRGVFDGTVENIHLHWKFRELVKIIVR 797
            P+ELPTDLE +S EERFL+RK+GLSMKPFLLLGRR VFDGT+ENIHLHWK+RELVKII  
Sbjct: 634  PSELPTDLEILSAEERFLFRKMGLSMKPFLLLGRRDVFDGTIENIHLHWKYRELVKIIAE 693

Query: 796  GKSFQQVKHIAISLEAESGGLLISVDKTNKGYAIIIYRGKNYQRPRAVRPKNLLTRRQAL 617
             ++  Q+KHIAI+LEAESGGLL+S+DKT +GYAII+YRGKNYQRP   RPKNLLT+RQAL
Sbjct: 694  RRNTAQIKHIAITLEAESGGLLVSIDKTTQGYAIILYRGKNYQRPNEFRPKNLLTKRQAL 753

Query: 616  ARSIELQRREALLHHISSLRDRIELLKAELDQMESAKETGNEELYRRLN 470
            ARSIELQRREAL HHI++L+D+I+ LK+EL+     +E   E L+ RL+
Sbjct: 754  ARSIELQRREALKHHITALQDKIQNLKSELEDTNMVEEIDEETLFSRLD 802


>ref|XP_002514120.1| conserved hypothetical protein [Ricinus communis]
            gi|223546576|gb|EEF48074.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 930

 Score =  671 bits (1730), Expect = 0.0
 Identities = 341/532 (64%), Positives = 423/532 (79%), Gaps = 1/532 (0%)
 Frame = -1

Query: 2056 VKFEGPPASNMKRTHEILENRSGGLVIWRSGSSLVLYRGLAYKLRCVRTYNNLNQCHQDI 1877
            +KFE P + NM+RTHEILENR+GGLVIWRSGSS+VLYRG++YKL CVR+++  ++  ++I
Sbjct: 372  LKFEEPLSFNMRRTHEILENRTGGLVIWRSGSSVVLYRGISYKLHCVRSFSKQDEAGKEI 431

Query: 1876 VNPLKDPNSYVAGDDGVNNSLRSTKSSVTG-SSLPKDLSEKEQNDMSVLNNLLDGLGPRF 1700
            +   ++  S    + GV + + +T+S +   +   KDLS +E  D + LN  LD LGPRF
Sbjct: 432  LAHPEEVTSNATLNIGVKHFIGTTESYIPDRAKYLKDLSREELTDFTELNQFLDELGPRF 491

Query: 1699 KDWSGCNPQPVDADLLPGVVPGYAPPFRLLPYGVKYSLRNKEMTFYRRRARVMPPHFALG 1520
            +DW G  P PVDADLL  V PGY PPFRLLPYGV++ L +KEMT +RR AR +PPHFALG
Sbjct: 492  EDWCGREPLPVDADLLLAVDPGYKPPFRLLPYGVRHCLTDKEMTIFRRLARTVPPHFALG 551

Query: 1519 RNRELQGLAQAMVKLWQRNAIAKIAIKRGVLNTCNERMAEELKKLTGGTLVSRNKDYIVF 1340
            RNR+LQGLA+A+VKLW+R+AI KIAIKRGV NT NERMAEELK LTGG L+SRNK+YIVF
Sbjct: 552  RNRQLQGLAKAIVKLWERSAIVKIAIKRGVQNTRNERMAEELKVLTGGILLSRNKEYIVF 611

Query: 1339 YRGNDFLSPNVTEALLERQKLVELQQDEEELARQRASSVLNVSNAKAAKFPLVAGTLAET 1160
            YRGNDFL P + + L ER+KL  L+QDEEE ARQ A + +  S+AK +K PLVAGTLAET
Sbjct: 612  YRGNDFLPPAIVKTLKERKKLTYLKQDEEEQARQMALASVE-SSAKTSKVPLVAGTLAET 670

Query: 1159 TAANSRWGNEPSGEDIEKMKRDFALTKHASVVRCLENKLTLAQQKFKKAERALTKVQEFL 980
             AA S W ++    DI++M R+  L K AS+V+ LENKL LA+ K +KAE+AL KV E L
Sbjct: 671  VAATSHWRDQRGSPDIDEMLREAVLAKRASLVKHLENKLALAKGKLRKAEKALAKVHEHL 730

Query: 979  KPTELPTDLETISDEERFLYRKIGLSMKPFLLLGRRGVFDGTVENIHLHWKFRELVKIIV 800
             P+ LPTDLETISDEERFL+RKIGLSMKP+L LG+RGV+DGT+EN+HLHWK+RELVK+IV
Sbjct: 731  DPSGLPTDLETISDEERFLFRKIGLSMKPYLFLGKRGVYDGTIENMHLHWKYRELVKVIV 790

Query: 799  RGKSFQQVKHIAISLEAESGGLLISVDKTNKGYAIIIYRGKNYQRPRAVRPKNLLTRRQA 620
            RGKSF QVKHIAISLEAESGG+L+S+++T KGYAII+YRGKNY  P  +RPKNLLT+RQA
Sbjct: 791  RGKSFAQVKHIAISLEAESGGVLVSIERTTKGYAIIVYRGKNYLHPEVMRPKNLLTKRQA 850

Query: 619  LARSIELQRREALLHHISSLRDRIELLKAELDQMESAKETGNEELYRRLNDA 464
            L RSIELQRREAL HHIS L++RIELLK EL+ MES KE   +++  RL+D+
Sbjct: 851  LVRSIELQRREALKHHISDLQERIELLKLELEDMESGKEIDVDKMSSRLDDS 902


>gb|EXB38853.1| Chloroplastic group IIA intron splicing facilitator CRS1 [Morus
            notabilis]
          Length = 859

 Score =  656 bits (1693), Expect = 0.0
 Identities = 337/523 (64%), Positives = 411/523 (78%), Gaps = 1/523 (0%)
 Frame = -1

Query: 2056 VKFEGPPASNMKRTHEILENRSGGLVIWRSGSSLVLYRGLAYKLRCVRTYNNLNQCHQDI 1877
            +KFE P + NM+RTHEILE+++GGLVIWRSGSS+VLYRG+ Y L CV++Y   NQ     
Sbjct: 293  LKFEEPLSLNMRRTHEILESKTGGLVIWRSGSSVVLYRGMTYNLLCVQSYTKENQSDSMK 352

Query: 1876 VNPLKDPNSYVAGDDGVNNSLRSTKSSVTGS-SLPKDLSEKEQNDMSVLNNLLDGLGPRF 1700
            +  L+D  S +  D  V  S+R+ +SS   S    K LSE E   ++ LN LLD LGPRF
Sbjct: 353  LPALEDGKSDIVHDKQVKVSIRTMESSTPISVKKVKGLSEGETMQLNDLNQLLDELGPRF 412

Query: 1699 KDWSGCNPQPVDADLLPGVVPGYAPPFRLLPYGVKYSLRNKEMTFYRRRARVMPPHFALG 1520
             DW G  P PVDADLLP VVP Y  PFR+LPYGVK  + NKEMT  RR AR++PPHFALG
Sbjct: 413  TDWLGREPLPVDADLLPPVVPDYRTPFRILPYGVKRCVGNKEMTKLRRTARMIPPHFALG 472

Query: 1519 RNRELQGLAQAMVKLWQRNAIAKIAIKRGVLNTCNERMAEELKKLTGGTLVSRNKDYIVF 1340
            RNRELQGLA+AMV+LW+++AIAKIAIKRGV NTCNERMAEELK+LTGGTL+SRNKD+I+F
Sbjct: 473  RNRELQGLAKAMVRLWEKSAIAKIAIKRGVQNTCNERMAEELKRLTGGTLLSRNKDFIIF 532

Query: 1339 YRGNDFLSPNVTEALLERQKLVELQQDEEELARQRASSVLNVSNAKAAKFPLVAGTLAET 1160
            YRGNDF+ P V  +L ER+KL +LQQDEEE  RQ A + +  S ++A    LVAGTLAET
Sbjct: 533  YRGNDFMPPVVVGSLKERRKLRDLQQDEEEKVRQMAPAFIQ-SKSQACINQLVAGTLAET 591

Query: 1159 TAANSRWGNEPSGEDIEKMKRDFALTKHASVVRCLENKLTLAQQKFKKAERALTKVQEFL 980
             AA +RWGN+ S  D+E M +D  L +HAS++R LE KL LA+    KAE+AL KVQE +
Sbjct: 592  MAATARWGNQQSPVDVEMMMKDSTLARHASIIRHLERKLALAKGNLTKAEKALAKVQENM 651

Query: 979  KPTELPTDLETISDEERFLYRKIGLSMKPFLLLGRRGVFDGTVENIHLHWKFRELVKIIV 800
             P++LP DLETI+DEERFL+RKIGLSM+PFLLLGRRG++ GT+EN+HLHWK+RELVKIIV
Sbjct: 652  DPSDLPNDLETITDEERFLFRKIGLSMEPFLLLGRRGLYSGTIENMHLHWKYRELVKIIV 711

Query: 799  RGKSFQQVKHIAISLEAESGGLLISVDKTNKGYAIIIYRGKNYQRPRAVRPKNLLTRRQA 620
            RGKSF+ VK IAISLEAESGG+L+S+DKT KGYAI++YRGKNYQ P  +RP+NLLTRRQA
Sbjct: 712  RGKSFEHVKQIAISLEAESGGVLVSIDKTIKGYAILVYRGKNYQSPLKIRPQNLLTRRQA 771

Query: 619  LARSIELQRREALLHHISSLRDRIELLKAELDQMESAKETGNE 491
            LARS+ELQRREAL HHI+ L++RI LLK+ELD+  + K   NE
Sbjct: 772  LARSVELQRREALQHHIAELQERIGLLKSELDESRNGKIVDNE 814


>ref|XP_004288953.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Fragaria vesca subsp. vesca]
          Length = 933

 Score =  654 bits (1686), Expect = 0.0
 Identities = 346/559 (61%), Positives = 423/559 (75%)
 Frame = -1

Query: 2056 VKFEGPPASNMKRTHEILENRSGGLVIWRSGSSLVLYRGLAYKLRCVRTYNNLNQCHQDI 1877
            +KFE P + NM+RTH ILE+++GGLVIWRSGSS+VLYRG++Y L+CV++Y    Q    +
Sbjct: 384  LKFEEPLSLNMRRTHGILESKTGGLVIWRSGSSVVLYRGISYNLQCVKSYTKQRQTGSHM 443

Query: 1876 VNPLKDPNSYVAGDDGVNNSLRSTKSSVTGSSLPKDLSEKEQNDMSVLNNLLDGLGPRFK 1697
            +  L+D        DG +N +             KDLS+KE  ++S LN+LLD LGPRFK
Sbjct: 444  LQDLED----TVRRDGTHNYM-------------KDLSKKELMELSDLNHLLDELGPRFK 486

Query: 1696 DWSGCNPQPVDADLLPGVVPGYAPPFRLLPYGVKYSLRNKEMTFYRRRARVMPPHFALGR 1517
            DW G  P PVDADLLP VVPGY  PFRLLPYGV+  L++K+MT +RR AR  PPHFALGR
Sbjct: 487  DWIGREPLPVDADLLPAVVPGYQTPFRLLPYGVRPGLKDKDMTKFRRLARAAPPHFALGR 546

Query: 1516 NRELQGLAQAMVKLWQRNAIAKIAIKRGVLNTCNERMAEELKKLTGGTLVSRNKDYIVFY 1337
            ++ELQGLA+AMVKLW++ AIAKIAIKRGV NT NERMAEELK+LTGGTL+SRNKD+IVFY
Sbjct: 547  SKELQGLAKAMVKLWEKCAIAKIAIKRGVQNTRNERMAEELKRLTGGTLLSRNKDFIVFY 606

Query: 1336 RGNDFLSPNVTEALLERQKLVELQQDEEELARQRASSVLNVSNAKAAKFPLVAGTLAETT 1157
            RGNDFL P VT  L ER+++ ELQQDEEE ARQ  S  +  S ++A+   LVAGTLAET 
Sbjct: 607  RGNDFLPPVVTGVLKERREMRELQQDEEEKARQMTSDYIE-SRSEASNGQLVAGTLAETI 665

Query: 1156 AANSRWGNEPSGEDIEKMKRDFALTKHASVVRCLENKLTLAQQKFKKAERALTKVQEFLK 977
            AA +RW  + + ED++KM RD  L K AS+VR LE KL LA+ K KKAE+AL KVQE L 
Sbjct: 666  AATARWIKQLTIEDVDKMTRDSNLEKRASLVRYLEKKLALAKGKLKKAEKALAKVQENLD 725

Query: 976  PTELPTDLETISDEERFLYRKIGLSMKPFLLLGRRGVFDGTVENIHLHWKFRELVKIIVR 797
            P +LP DLE ++DE+RFL+RKIGLSMKPFLLLGRR V+ GT+EN+HLHWK RELVKIIVR
Sbjct: 726  PADLPDDLEILTDEDRFLFRKIGLSMKPFLLLGRREVYSGTIENMHLHWKHRELVKIIVR 785

Query: 796  GKSFQQVKHIAISLEAESGGLLISVDKTNKGYAIIIYRGKNYQRPRAVRPKNLLTRRQAL 617
            GK+F+QVKHIAISLEAESGGLL+S+DKT KGYAII+YRGKNYQ P  +RP+NLLTRRQAL
Sbjct: 786  GKNFKQVKHIAISLEAESGGLLVSLDKTTKGYAIILYRGKNYQCPLPLRPRNLLTRRQAL 845

Query: 616  ARSIELQRREALLHHISSLRDRIELLKAELDQMESAKETGNEELYRRLNDALNXXXXXXX 437
            ARSIELQRRE L HH+S L++RIELLK EL++ME+ +   +    R L+ +L+       
Sbjct: 846  ARSIELQRREGLKHHLSDLQERIELLKTELEEMENGRMVDDG---RTLHSSLDDSLFSSD 902

Query: 436  XXXXXXXXVYLKTYDSADE 380
                     YL+ YDS +E
Sbjct: 903  NEEDEGEEAYLEVYDSGNE 921


>ref|XP_007203795.1| hypothetical protein PRUPE_ppa001111mg [Prunus persica]
            gi|462399326|gb|EMJ04994.1| hypothetical protein
            PRUPE_ppa001111mg [Prunus persica]
          Length = 906

 Score =  654 bits (1686), Expect = 0.0
 Identities = 341/560 (60%), Positives = 427/560 (76%), Gaps = 1/560 (0%)
 Frame = -1

Query: 2056 VKFEGPPASNMKRTHEILENRSGGLVIWRSGSSLVLYRGLAYKLRCVRTYNNLNQCHQDI 1877
            +KFE P + NMKRTHEILE+++GGLVIWRSGSS+VLYRG+ Y L CV+TY   +Q +  +
Sbjct: 338  LKFEEPFSLNMKRTHEILESKTGGLVIWRSGSSVVLYRGMTYNLPCVQTYAKHSQTNSHM 397

Query: 1876 VNPLKDPNSYVAGDDGVNNSLRSTK-SSVTGSSLPKDLSEKEQNDMSVLNNLLDGLGPRF 1700
            +   ++  S    + GV +  R+T   S+  +   KDLS++E   ++ LN+LLD LGPRF
Sbjct: 398  LQHSENATSDSMHNVGVKDVSRTTDFPSLESAEYLKDLSQRELMALNDLNHLLDELGPRF 457

Query: 1699 KDWSGCNPQPVDADLLPGVVPGYAPPFRLLPYGVKYSLRNKEMTFYRRRARVMPPHFALG 1520
            KDW G  P PVDADLLP VV GY  PFRLLPYG +  LR+K+MT YRR AR +PPHFALG
Sbjct: 458  KDWIGREPLPVDADLLPSVVRGYKTPFRLLPYGFRPCLRDKDMTKYRRLARTVPPHFALG 517

Query: 1519 RNRELQGLAQAMVKLWQRNAIAKIAIKRGVLNTCNERMAEELKKLTGGTLVSRNKDYIVF 1340
             NRELQGLA AM+KLW+++AIAKIAIKRGV NTCNERMAEELK+LTGGTL+SRNKD+IVF
Sbjct: 518  MNRELQGLANAMMKLWEKSAIAKIAIKRGVQNTCNERMAEELKRLTGGTLLSRNKDFIVF 577

Query: 1339 YRGNDFLSPNVTEALLERQKLVELQQDEEELARQRASSVLNVSNAKAAKFPLVAGTLAET 1160
            YRGND+L   VT  L ER+KL +LQQDEEE ARQ AS  + VSN++A+K   VAGTLAET
Sbjct: 578  YRGNDYLPSVVTGVLEERRKLRDLQQDEEEQARQMASDYV-VSNSEASKGQFVAGTLAET 636

Query: 1159 TAANSRWGNEPSGEDIEKMKRDFALTKHASVVRCLENKLTLAQQKFKKAERALTKVQEFL 980
             AA + W N+ + + +EKM+RD    +HAS+VR LE KL L + K +KAE+AL +VQE L
Sbjct: 637  MAATTHWRNQLTIDKVEKMRRDSTFARHASLVRHLEKKLALGKGKLRKAEKALARVQESL 696

Query: 979  KPTELPTDLETISDEERFLYRKIGLSMKPFLLLGRRGVFDGTVENIHLHWKFRELVKIIV 800
            +P++LP DLET++DE+RFL+RKIGLSMKPFLLLGRR V+ GT+EN+HLHWK +ELVKIIV
Sbjct: 697  EPSDLPDDLETLTDEDRFLFRKIGLSMKPFLLLGRREVYSGTIENMHLHWKHKELVKIIV 756

Query: 799  RGKSFQQVKHIAISLEAESGGLLISVDKTNKGYAIIIYRGKNYQRPRAVRPKNLLTRRQA 620
            RGKSF+QVKHIAISLEAESGG+L+S+DKT KGYAII+YRGKNYQ P  +RP+NLLTRRQA
Sbjct: 757  RGKSFEQVKHIAISLEAESGGVLVSLDKTTKGYAIILYRGKNYQCPLPLRPRNLLTRRQA 816

Query: 619  LARSIELQRREALLHHISSLRDRIELLKAELDQMESAKETGNEELYRRLNDALNXXXXXX 440
            LARS+ELQRREAL HHIS L++++ LLK+EL++M + +   +        D  +      
Sbjct: 817  LARSVELQRREALKHHISDLQEKVGLLKSELEEMGNGRMVDDGRTLHSTGD--DPLIPSD 874

Query: 439  XXXXXXXXXVYLKTYDSADE 380
                      YL+ YDS +E
Sbjct: 875  DSEEDEGEEAYLEVYDSGNE 894


>ref|XP_006840356.1| hypothetical protein AMTR_s00045p00114550 [Amborella trichopoda]
            gi|548842074|gb|ERN02031.1| hypothetical protein
            AMTR_s00045p00114550 [Amborella trichopoda]
          Length = 1059

 Score =  650 bits (1677), Expect = 0.0
 Identities = 336/533 (63%), Positives = 410/533 (76%), Gaps = 1/533 (0%)
 Frame = -1

Query: 2056 VKFEGPPASNMKRTHEILENRSGGLVIWRSGSSLVLYRGLAYKLRCVRTYNNLNQCHQDI 1877
            +KFEGPPA NMKRTHEILE ++GGLVI R GS +VLYRG+ Y+L CV++Y        D 
Sbjct: 518  IKFEGPPAMNMKRTHEILERKTGGLVILRCGSFVVLYRGMGYELPCVQSYRQHLHIIHDT 577

Query: 1876 VNPLKDPNSYVAGDDGVNNSLRSTKSSVTGSSLPKDLSEKEQNDMSVLNNLLDGLGPRFK 1697
            +     P +   GD  VN  +R+T SS  G+S P +  + E    + +  +L+ LGPRF+
Sbjct: 578  LPHDMIPATDNIGDTKVNALVRATVSS--GTSSPTNYDKCESPHETDIEIILESLGPRFR 635

Query: 1696 DWSGCNPQPVDADLLPGVVPGYAPPFRLLPYGVKYSLRNKEMTFYRRRARVMPPHFALGR 1517
            DWSGC P PVDADLLP V+PGY PPFR LP+G+++ L+NK+MT  RR AR MPPHFALGR
Sbjct: 636  DWSGCAPLPVDADLLPPVLPGYKPPFRFLPHGMRHCLKNKDMTALRRLARQMPPHFALGR 695

Query: 1516 NRELQGLAQAMVKLWQRNAIAKIAIKRGVLNTCNERMAEELKKLTGGTLVSRNKDYIVFY 1337
            NR LQGLA AMV LW+ + IAKIAIKRGV NTCNERMAEEL+KLTGG LVSRNK+YIVFY
Sbjct: 696  NRVLQGLAAAMVNLWETSVIAKIAIKRGVQNTCNERMAEELEKLTGGILVSRNKEYIVFY 755

Query: 1336 RGNDFLSPNVTEALLERQKLVELQQDEEELARQRASSVLNVSNAKAAKFPLVAGTLAETT 1157
            RGNDFLSP+V E L+ R+KL +   DEEE AR +A +   +SN   A+ PLVAGTL ET 
Sbjct: 756  RGNDFLSPSVKEVLVNREKLAKSLLDEEEKARMKAHAS-TLSNTSTARGPLVAGTLEETL 814

Query: 1156 AANSRWGNEPSGEDIEKMKRDFALTKHASVVRCLENKLTLAQQKFKKAERALTKVQEFLK 977
             A SRWG +PS  + ++MKRD  L++HA++++ LE KL LA++K  KAERAL KVQE LK
Sbjct: 815  EAKSRWGMQPSTHERDEMKRDMTLSRHAALIKHLEKKLALAKRKVSKAERALLKVQEDLK 874

Query: 976  PTELPTDLETISDEERFLYRKIGLSMKPFLLLGRRGVFDGTVENIHLHWKFRELVKIIVR 797
            P ELPTDLE I+DEER  +RK+GLSMKP+LLLGRRGVFDGTVEN+HLHWK+REL+KI+V+
Sbjct: 875  PAELPTDLEIITDEERITFRKMGLSMKPYLLLGRRGVFDGTVENMHLHWKYRELIKILVK 934

Query: 796  GKSFQQVKHIAISLEAESGGLLISVDKTNKGYAIIIYRGKNYQRPRAVRPKNLLTRRQAL 617
            GK F QVKHIAISLEAESGG+LISVDKT KGYAII+YRGKNYQRP  VRP NLLT+R+AL
Sbjct: 935  GKRFLQVKHIAISLEAESGGVLISVDKTTKGYAIILYRGKNYQRPSMVRPGNLLTKRKAL 994

Query: 616  ARSIELQRREALLHHISSLRDRIELLKAELDQMESA-KETGNEELYRRLNDAL 461
            ARS+ELQRREAL HHI  L+ +IE L++E DQM +  ++ G E+ Y    D +
Sbjct: 995  ARSVELQRREALNHHILDLQMQIEKLRSEFDQMRTVWEKEGQEDSYVTSEDEI 1047


>gb|EYU29891.1| hypothetical protein MIMGU_mgv1a001353mg [Mimulus guttatus]
          Length = 835

 Score =  647 bits (1670), Expect = 0.0
 Identities = 332/535 (62%), Positives = 416/535 (77%), Gaps = 4/535 (0%)
 Frame = -1

Query: 2056 VKFEGPPASNMKRTHEILENRSGGLVIWRSGSSLVLYRGLAYKLRCVRTYNNLNQCHQDI 1877
            +KF GPP+ NMKRTHEILE R+GGLVIWRSGSSLVLYRG+ Y L CV++Y    +   + 
Sbjct: 305  LKFLGPPSKNMKRTHEILERRTGGLVIWRSGSSLVLYRGMTYNLDCVKSYTKHVEDDAEE 364

Query: 1876 VNPLKDPNSYVAGDDGVNNSLRSTKSSVT-GSSLPKDLSEKEQNDMSVLNNLLDGLGPRF 1700
            +   K+ +        +    R  +SS T  S    +LSE+EQ D+S +N LLD LGPRF
Sbjct: 365  LESSKEDSP-----QRIKVKKRPGESSGTFDSDYFNNLSEEEQMDLSEMNLLLDELGPRF 419

Query: 1699 KDWSGCNPQPVDADLLPGVVPGYAPPFRLLPYGVKYSLRNKEMTFYRRRARVMPPHFALG 1520
             DWSG +P PVDADLLP VVPGY  P+RLLP+G++  LR+K+MT+ RR AR MPPHF LG
Sbjct: 420  IDWSGRDPLPVDADLLPPVVPGYKTPYRLLPHGIRQPLRDKQMTYIRRTARTMPPHFVLG 479

Query: 1519 RNRELQGLAQAMVKLWQRNAIAKIAIKRGVLNTCNERMAEELKKLTGGTLVSRNKDYIVF 1340
            RNRELQGLA AMVKLW+++++AKIAIKRGVLNT NERMAEELK+LTGGTLVSRNK++IVF
Sbjct: 480  RNRELQGLALAMVKLWEKSSLAKIAIKRGVLNTSNERMAEELKRLTGGTLVSRNKEFIVF 539

Query: 1339 YRGNDFLSPNVTEALLERQKLVELQQDEEELARQRASSVLNV---SNAKAAKFPLVAGTL 1169
            YRGNDFL P ++ AL E++  + LQQD EE ARQRA+S++     + +K  K  LVAGTL
Sbjct: 540  YRGNDFLPPGISSALTEKENSITLQQDHEEKARQRAASLIEPKLKALSKKHKPLLVAGTL 599

Query: 1168 AETTAANSRWGNEPSGEDIEKMKRDFALTKHASVVRCLENKLTLAQQKFKKAERALTKVQ 989
            AET AA +RWGN+ +G D+EKM R+ A+ +HA +V  L+ KL LA++K +KAE++L KV 
Sbjct: 600  AETIAATTRWGNQSNGADMEKMMRENAVDRHAFLVNSLQKKLALAKEKMRKAEKSLQKVL 659

Query: 988  EFLKPTELPTDLETISDEERFLYRKIGLSMKPFLLLGRRGVFDGTVENIHLHWKFRELVK 809
            E  +P +LPTDLET++DEERFL+R+IGLSMKP+LLLGRR +FDGT+EN+HLHWK+RELVK
Sbjct: 660  ENQEPGDLPTDLETLTDEERFLFRRIGLSMKPYLLLGRREIFDGTIENMHLHWKYRELVK 719

Query: 808  IIVRGKSFQQVKHIAISLEAESGGLLISVDKTNKGYAIIIYRGKNYQRPRAVRPKNLLTR 629
            I+V+ K+F QVKHIA+SLEAESGG+L+SVDKT KGY II+YRGKNYQ P A RP+NLLT+
Sbjct: 720  IMVQRKTFPQVKHIAVSLEAESGGVLVSVDKTFKGYVIIVYRGKNYQSPLAFRPRNLLTK 779

Query: 628  RQALARSIELQRREALLHHISSLRDRIELLKAELDQMESAKETGNEELYRRLNDA 464
            RQALARSIELQRREAL HH+  L ++ E LK EL+ M +A + G E    R+N A
Sbjct: 780  RQALARSIELQRREALKHHVWELEEKFEKLKQELEDMMAANKNGAESSGSRINSA 834


>ref|XP_003550629.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Glycine max]
          Length = 794

 Score =  646 bits (1666), Expect = 0.0
 Identities = 333/535 (62%), Positives = 421/535 (78%), Gaps = 3/535 (0%)
 Frame = -1

Query: 2053 KFEGPPASNMKRTHEILENRSGGLVIWRSGSSLVLYRGLAYKLRCVRTYNNLNQCHQDIV 1874
            KF  P +++MK+ H+ILE++ GG+VIWRSGSS+VLYRG+AYKL C+  Y  +N   ++ V
Sbjct: 248  KFGIPLSAHMKKAHQILESKIGGIVIWRSGSSIVLYRGMAYKLPCIENYKKVNLAKENAV 307

Query: 1873 NPLKDPNSYVAGDDGVNNSLRSTKSSVTGSS-LPKDLSEKEQNDMSVLNNLLDGLGPRFK 1697
            +      +   G   VN ++ + +S +  S+   KD+SE+E  +M  LN+LLD LGPRFK
Sbjct: 308  DHSLHVGNGSDGQASVNETVGTAESVIQESAEYLKDMSEEELMEMCDLNHLLDELGPRFK 367

Query: 1696 DWSGCNPQPVDADLLPGVVPGYAPPFRLLPYGVKYSLRNKEMTFYRRRARVMPPHFALGR 1517
            DW+G  P PVDADLLP VVPGY  PFRLLPY ++  L NKEMT +RR AR   PHFALGR
Sbjct: 368  DWTGRQPLPVDADLLPAVVPGYKTPFRLLPYRIRPCLTNKEMTNFRRLARTTAPHFALGR 427

Query: 1516 NRELQGLAQAMVKLWQRNAIAKIAIKRGVLNTCNERMAEELKKLTGGTLVSRNKDYIVFY 1337
            NRELQGLA+AMVKLW+ +AIAKIAIKRGV NTCN+RMAEEL+KLTGGTL+SRNK+YIVFY
Sbjct: 428  NRELQGLARAMVKLWETSAIAKIAIKRGVPNTCNDRMAEELRKLTGGTLLSRNKEYIVFY 487

Query: 1336 RGNDFLSPNVTEALLERQKLVELQQDEEELARQRASSVLNVSNAKAAKFPLVAGTLAETT 1157
            RGNDFL P VT  L ERQKL  LQQDEE+ ARQ ASS+  VSN+KAA+ PL+AGTL ET 
Sbjct: 488  RGNDFLPPVVTNTLNERQKLTLLQQDEEDKARQIASSI-TVSNSKAAQVPLIAGTLTETR 546

Query: 1156 AANSRWGNEPSGEDIEKMKRDFALTKHASVVRCLENKLTLAQQKFKKAERALTKVQEFLK 977
            AA + WG++PS ++IE M RD A+ K +++V+  E KL LA+ KF+KAE+AL KVQ  L 
Sbjct: 547  AATTNWGHQPSKQEIENMIRDSAMNKLSALVKHHEKKLALAKSKFRKAEKALAKVQRDLD 606

Query: 976  PTELPTDLETISDEERFLYRKIGLSMKPFLLLGRRGVFDGTVENIHLHWKFRELVKIIVR 797
            P ++P+DLET+++EERFL+RKIGLSMKP+LLLGRR V+ GT+EN+HLHWK+RELVK+IV+
Sbjct: 607  PADIPSDLETLTNEERFLFRKIGLSMKPYLLLGRRDVYAGTIENMHLHWKYRELVKLIVK 666

Query: 796  GKSFQQVKHIAISLEAESGGLLISVDKTNKG-YAIIIYRGKNYQRPRAVRPKNLLTRRQA 620
            G++  QVKHI+ISLEAESGG+L+SVDK  +G + II+YRGKNY  PR VRPKNLLTRRQA
Sbjct: 667  GRNSAQVKHISISLEAESGGVLVSVDKDTRGHHTIIVYRGKNYFSPRVVRPKNLLTRRQA 726

Query: 619  LARSIELQRREALLHHISSLRDRIELLKAELDQMESAKE-TGNEELYRRLNDALN 458
            LARS+ELQRREAL HHIS L +RI LLK+EL+ M++ KE   ++ LY  L + ++
Sbjct: 727  LARSVELQRREALKHHISDLEERIGLLKSELEDMKNGKEIEDSKTLYPALENPVS 781


>ref|XP_006475466.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like isoform X1 [Citrus sinensis]
            gi|568843115|ref|XP_006475467.1| PREDICTED: chloroplastic
            group IIA intron splicing facilitator CRS1,
            chloroplastic-like isoform X2 [Citrus sinensis]
            gi|568843117|ref|XP_006475468.1| PREDICTED: chloroplastic
            group IIA intron splicing facilitator CRS1,
            chloroplastic-like isoform X3 [Citrus sinensis]
            gi|568843119|ref|XP_006475469.1| PREDICTED: chloroplastic
            group IIA intron splicing facilitator CRS1,
            chloroplastic-like isoform X4 [Citrus sinensis]
          Length = 812

 Score =  645 bits (1663), Expect = 0.0
 Identities = 336/518 (64%), Positives = 409/518 (78%), Gaps = 1/518 (0%)
 Frame = -1

Query: 2056 VKFEGPPASNMKRTHEILENRSGGLVIWRSGSSLVLYRGLAYKLRCVRTYNNLNQCHQDI 1877
            +KFE P +  MKRTHEILE R+GGLVIWRSGSS+VL+RG+AYKL CV+++   N   Q  
Sbjct: 298  LKFEEPHSLQMKRTHEILERRTGGLVIWRSGSSVVLFRGMAYKLPCVQSFTKHNHTQQT- 356

Query: 1876 VNPLKDPNSYVAGDDGVNNSLRSTKSSVTGSSLP-KDLSEKEQNDMSVLNNLLDGLGPRF 1700
                +D  + V  + G +    + +S V  S+   ++LS++E  D+  LN LLD LGPRF
Sbjct: 357  ----QDVTNEVMRNVGEHPPRSAMESYVPDSANNLENLSKEELMDLCELNYLLDELGPRF 412

Query: 1699 KDWSGCNPQPVDADLLPGVVPGYAPPFRLLPYGVKYSLRNKEMTFYRRRARVMPPHFALG 1520
            KDW G  P PVDADLLP VVP Y PP RLLPYG+K  LR+ E T +RR AR  PPHFALG
Sbjct: 413  KDWPGREPLPVDADLLPPVVPDYKPPLRLLPYGIKPGLRDCETTEFRRLARKTPPHFALG 472

Query: 1519 RNRELQGLAQAMVKLWQRNAIAKIAIKRGVLNTCNERMAEELKKLTGGTLVSRNKDYIVF 1340
            RNRELQGLA+AMVKLW+++AIAKIAIKR V+NT NERMAEELKKLTGGTL+ RNKDYIVF
Sbjct: 473  RNRELQGLAKAMVKLWEKSAIAKIAIKRDVMNTRNERMAEELKKLTGGTLLCRNKDYIVF 532

Query: 1339 YRGNDFLSPNVTEALLERQKLVELQQDEEELARQRASSVLNVSNAKAAKFPLVAGTLAET 1160
            YRGNDFL P VT+A+ ER KL +++QDEEE AR  AS+++ +  AK     LVAGTLAET
Sbjct: 533  YRGNDFLPPVVTDAVKERSKLTDIRQDEEEQARHVASALIELK-AKGFVGSLVAGTLAET 591

Query: 1159 TAANSRWGNEPSGEDIEKMKRDFALTKHASVVRCLENKLTLAQQKFKKAERALTKVQEFL 980
             AA SRWG +PS ED+EKM RD  L++HAS++R LE KL LA++K K A++AL KVQE L
Sbjct: 592  LAATSRWGRQPSYEDVEKMMRDSTLSRHASLLRYLEQKLALAKRKLKMADKALAKVQESL 651

Query: 979  KPTELPTDLETISDEERFLYRKIGLSMKPFLLLGRRGVFDGTVENIHLHWKFRELVKIIV 800
             P ELP+DLETI++EERFL RK+GLSMKP+LLLGRRG++DGT+EN+HLHWK+RELVKIIV
Sbjct: 652  DPAELPSDLETITNEERFLLRKMGLSMKPYLLLGRRGIYDGTIENMHLHWKYRELVKIIV 711

Query: 799  RGKSFQQVKHIAISLEAESGGLLISVDKTNKGYAIIIYRGKNYQRPRAVRPKNLLTRRQA 620
            +GKSF QVK IAISLEAESGG+L+S+DKT KG AII+YRGKNY RP  +RP+NLL RRQA
Sbjct: 712  KGKSFAQVKQIAISLEAESGGVLVSLDKTPKGIAIIVYRGKNYVRPLKLRPQNLLNRRQA 771

Query: 619  LARSIELQRREALLHHISSLRDRIELLKAELDQMESAK 506
            LARS+ELQRRE L HHI  L +RIEL+K+EL+++E  K
Sbjct: 772  LARSVELQRREGLKHHILDLEERIELVKSELEEIEGGK 809


>ref|XP_006451488.1| hypothetical protein CICLE_v10007477mg [Citrus clementina]
            gi|557554714|gb|ESR64728.1| hypothetical protein
            CICLE_v10007477mg [Citrus clementina]
          Length = 810

 Score =  645 bits (1663), Expect = 0.0
 Identities = 336/518 (64%), Positives = 409/518 (78%), Gaps = 1/518 (0%)
 Frame = -1

Query: 2056 VKFEGPPASNMKRTHEILENRSGGLVIWRSGSSLVLYRGLAYKLRCVRTYNNLNQCHQDI 1877
            +KFE P +  MKRTHEILE R+GGLVIWRSGSS+VL+RG+AYKL CV+++   N   Q  
Sbjct: 296  LKFEEPHSLQMKRTHEILERRTGGLVIWRSGSSVVLFRGMAYKLPCVQSFTKHNHTQQT- 354

Query: 1876 VNPLKDPNSYVAGDDGVNNSLRSTKSSVTGSSLP-KDLSEKEQNDMSVLNNLLDGLGPRF 1700
                +D  + V  + G +    + +S V  S+   ++LS++E  D+  LN LLD LGPRF
Sbjct: 355  ----QDVTNEVMRNVGEHPPRSAMESYVPDSANNLENLSKEELMDLCELNYLLDELGPRF 410

Query: 1699 KDWSGCNPQPVDADLLPGVVPGYAPPFRLLPYGVKYSLRNKEMTFYRRRARVMPPHFALG 1520
            KDW G  P PVDADLLP VVP Y PP RLLPYG+K  LR+ E T +RR AR  PPHFALG
Sbjct: 411  KDWPGREPLPVDADLLPPVVPDYKPPLRLLPYGIKPGLRDCETTEFRRLARKTPPHFALG 470

Query: 1519 RNRELQGLAQAMVKLWQRNAIAKIAIKRGVLNTCNERMAEELKKLTGGTLVSRNKDYIVF 1340
            RNRELQGLA+AMVKLW+++AIAKIAIKR V+NT NERMAEELKKLTGGTL+ RNKDYIVF
Sbjct: 471  RNRELQGLAKAMVKLWEKSAIAKIAIKRDVMNTRNERMAEELKKLTGGTLLCRNKDYIVF 530

Query: 1339 YRGNDFLSPNVTEALLERQKLVELQQDEEELARQRASSVLNVSNAKAAKFPLVAGTLAET 1160
            YRGNDFL P VT+A+ ER KL +++QDEEE AR  AS+++ +  AK     LVAGTLAET
Sbjct: 531  YRGNDFLPPVVTDAVKERSKLTDIRQDEEEQARHVASALIELK-AKGFVGSLVAGTLAET 589

Query: 1159 TAANSRWGNEPSGEDIEKMKRDFALTKHASVVRCLENKLTLAQQKFKKAERALTKVQEFL 980
             AA SRWG +PS ED+EKM RD  L++HAS++R LE KL LA++K K A++AL KVQE L
Sbjct: 590  LAATSRWGRQPSYEDVEKMMRDSTLSRHASLLRYLEQKLALAKRKLKMADKALAKVQESL 649

Query: 979  KPTELPTDLETISDEERFLYRKIGLSMKPFLLLGRRGVFDGTVENIHLHWKFRELVKIIV 800
             P ELP+DLETI++EERFL RK+GLSMKP+LLLGRRG++DGT+EN+HLHWK+RELVKIIV
Sbjct: 650  DPAELPSDLETITNEERFLLRKMGLSMKPYLLLGRRGIYDGTIENMHLHWKYRELVKIIV 709

Query: 799  RGKSFQQVKHIAISLEAESGGLLISVDKTNKGYAIIIYRGKNYQRPRAVRPKNLLTRRQA 620
            +GKSF QVK IAISLEAESGG+L+S+DKT KG AII+YRGKNY RP  +RP+NLL RRQA
Sbjct: 710  KGKSFAQVKQIAISLEAESGGVLVSLDKTPKGIAIIVYRGKNYVRPLKLRPQNLLNRRQA 769

Query: 619  LARSIELQRREALLHHISSLRDRIELLKAELDQMESAK 506
            LARS+ELQRRE L HHI  L +RIEL+K+EL+++E  K
Sbjct: 770  LARSVELQRREGLKHHILDLEERIELVKSELEEIEGGK 807


>ref|XP_004507937.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like isoform X1 [Cicer arietinum]
          Length = 768

 Score =  642 bits (1655), Expect = 0.0
 Identities = 329/537 (61%), Positives = 413/537 (76%), Gaps = 6/537 (1%)
 Frame = -1

Query: 2053 KFEGPPASNMKRTHEILENRSGGLVIWRSGSSLVLYRGLAYKLRCVRTYNNLNQCHQDIV 1874
            KF+ P ++NMKR H+ILE+++GG+V+WRSGSS+VLYRG+ YKL CV  Y  +N   ++ V
Sbjct: 222  KFDSPLSANMKRAHQILESKTGGIVVWRSGSSIVLYRGMTYKLPCVELYTKVNDIKENAV 281

Query: 1873 NPLKDPNSYVAGDDGVNNSLRSTKSSV-----TGSSLPKDLSEKEQNDMSVLNNLLDGLG 1709
                D + +V        S++     +       +   KD+SE+E  ++  LN+LLD LG
Sbjct: 282  ----DHSVHVGSGSNAQVSVQEMVGPIESFNRNAAEYLKDMSEEELMELIELNHLLDELG 337

Query: 1708 PRFKDWSGCNPQPVDADLLPGVVPGYAPPFRLLPYGVKYSLRNKEMTFYRRRARVMPPHF 1529
            PRFKDW+G  P PVDAD+LP +VPGY  PFRLLPYGVK  L NKEMT  RR AR   PHF
Sbjct: 338  PRFKDWTGREPLPVDADMLPALVPGYKTPFRLLPYGVKPCLSNKEMTVIRRIARRTAPHF 397

Query: 1528 ALGRNRELQGLAQAMVKLWQRNAIAKIAIKRGVLNTCNERMAEELKKLTGGTLVSRNKDY 1349
            ALGRNRELQGLA+A+VKLW+ +AIAKIAIKRGV  TCN+RMAEELKKLTGGTLVSRNK+Y
Sbjct: 398  ALGRNRELQGLARAIVKLWETSAIAKIAIKRGVPYTCNDRMAEELKKLTGGTLVSRNKEY 457

Query: 1348 IVFYRGNDFLSPNVTEALLERQKLVELQQDEEELARQRASSVLNVSNAKAAKFPLVAGTL 1169
            IVFYRGNDFL P VT  L ERQKL  LQQDEEE ARQ A S+  +SN K+++ PL+AGTL
Sbjct: 458  IVFYRGNDFLPPTVTNTLTERQKLTVLQQDEEEKARQNALSI-TISNRKSSQMPLLAGTL 516

Query: 1168 AETTAANSRWGNEPSGEDIEKMKRDFALTKHASVVRCLENKLTLAQQKFKKAERALTKVQ 989
            AET AA + WG++PS ++ EKM R+  L + +S++R  E KL LA+ +FKKAE+ L K+Q
Sbjct: 517  AETRAATTNWGHQPSKQEAEKMMRESTLDRLSSLIRNHEKKLALAKARFKKAEKDLAKIQ 576

Query: 988  EFLKPTELPTDLETISDEERFLYRKIGLSMKPFLLLGRRGVFDGTVENIHLHWKFRELVK 809
              L P +LP+DLET+++EERFL+RKIGLSMKP+LLLGRR V+ GT+EN+HLHWK+RE+VK
Sbjct: 577  GDLDPADLPSDLETLTNEERFLFRKIGLSMKPYLLLGRRDVYAGTIENMHLHWKYREVVK 636

Query: 808  IIVRGKSFQQVKHIAISLEAESGGLLISVDKTNKGYAIIIYRGKNYQRPRAVRPKNLLTR 629
            IIV+GK+  QVKHIAISLEAESGG+L+SVDK  KGY II+YRGKNY RP+  RPK+LLTR
Sbjct: 637  IIVKGKNLAQVKHIAISLEAESGGVLVSVDKDTKGYIIILYRGKNYFRPQVTRPKSLLTR 696

Query: 628  RQALARSIELQRREALLHHISSLRDRIELLKAELDQMESAK-ETGNEELYRRLNDAL 461
            RQALARSIELQRREAL +HIS L++ IELLK+EL+  ++ K   G++ +Y  L + L
Sbjct: 697  RQALARSIELQRREALKYHISDLQEMIELLKSELEDKKNEKVNDGDKTMYSTLANTL 753