BLASTX nr result

ID: Sinomenium22_contig00042369 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium22_contig00042369
         (479 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282803.1| PREDICTED: pentatricopeptide repeat-containi...    59   7e-07
emb|CAN74403.1| hypothetical protein VITISV_043633 [Vitis vinifera]    59   7e-07
ref|XP_002978636.1| hypothetical protein SELMODRAFT_109283 [Sela...    59   9e-07
ref|XP_007204466.1| hypothetical protein PRUPE_ppa023169mg [Prun...    58   1e-06
gb|ACE80803.1| pentatricopeptide repeat protein [Cycas revoluta]       57   2e-06
ref|XP_002984574.1| hypothetical protein SELMODRAFT_120669 [Sela...    57   3e-06

>ref|XP_002282803.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g40720-like [Vitis vinifera]
          Length = 854

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 27/40 (67%), Positives = 32/40 (80%)
 Frame = -3

Query: 477 FTAGDRSHLQSNKIYAKLSSLTTFMKENGYVPDLRWVLQD 358
           F+AGDRSH QS+KIYAKLS L + M+E GY PDLRWV  +
Sbjct: 812 FSAGDRSHPQSDKIYAKLSILLSSMRETGYDPDLRWVFHE 851


>emb|CAN74403.1| hypothetical protein VITISV_043633 [Vitis vinifera]
          Length = 841

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 27/40 (67%), Positives = 32/40 (80%)
 Frame = -3

Query: 477 FTAGDRSHLQSNKIYAKLSSLTTFMKENGYVPDLRWVLQD 358
           F+AGDRSH QS+KIYAKLS L + M+E GY PDLRWV  +
Sbjct: 799 FSAGDRSHPQSDKIYAKLSILLSSMRETGYDPDLRWVFHE 838


>ref|XP_002978636.1| hypothetical protein SELMODRAFT_109283 [Selaginella moellendorffii]
           gi|300153445|gb|EFJ20083.1| hypothetical protein
           SELMODRAFT_109283 [Selaginella moellendorffii]
          Length = 438

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 44/99 (44%), Positives = 55/99 (55%), Gaps = 4/99 (4%)
 Frame = -3

Query: 477 FTAGDRSHLQSNKIYAKLSSLTTFMKENGYVPDLRWVLQD*RMIKKVRGYLF-IVRSCVI 301
           F AGD SH+Q N I AKL  L++ MKE GYVPD   VL D    +K +  L+   +  V 
Sbjct: 318 FVAGDMSHVQMNPIRAKLQELSSAMKEAGYVPDTSLVLHDVAEEEKEQVLLWHSEKLAVA 377

Query: 300 FGLLNTPFSAWIPSRFALFLR---D*SDALRDPNALESK 193
           FGLLNTP  A  P R    LR   D  DA +  +A+E +
Sbjct: 378 FGLLNTP--AGSPIRVIKNLRVCKDCHDAAKLISAIEQR 414


>ref|XP_007204466.1| hypothetical protein PRUPE_ppa023169mg [Prunus persica]
           gi|462399997|gb|EMJ05665.1| hypothetical protein
           PRUPE_ppa023169mg [Prunus persica]
          Length = 86

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 27/40 (67%), Positives = 33/40 (82%)
 Frame = -3

Query: 477 FTAGDRSHLQSNKIYAKLSSLTTFMKENGYVPDLRWVLQD 358
           F AGD SHLQS+ IYA L+SL T +KE+GY+PDLR VL+D
Sbjct: 44  FVAGDTSHLQSDIIYASLNSLLTLIKESGYIPDLRLVLRD 83


>gb|ACE80803.1| pentatricopeptide repeat protein [Cycas revoluta]
          Length = 152

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 33/68 (48%), Positives = 43/68 (63%), Gaps = 2/68 (2%)
 Frame = -3

Query: 477 FTAGDRSHLQSNKIYAKLSSLTTFMKENGYVPDLRWVLQD*RMIKKVRGYLFI--VRSCV 304
           F AGDRSH Q+ KIYAKL  LT  MKE GY+P   +VL D    +K + +LF    +  +
Sbjct: 39  FVAGDRSHPQAEKIYAKLERLTGEMKETGYMPHTEFVLHDVEEEQKEQ-FLFYHSEKLAI 97

Query: 303 IFGLLNTP 280
            FGL++TP
Sbjct: 98  AFGLISTP 105


>ref|XP_002984574.1| hypothetical protein SELMODRAFT_120669 [Selaginella moellendorffii]
           gi|300147556|gb|EFJ14219.1| hypothetical protein
           SELMODRAFT_120669 [Selaginella moellendorffii]
          Length = 369

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 43/99 (43%), Positives = 55/99 (55%), Gaps = 4/99 (4%)
 Frame = -3

Query: 477 FTAGDRSHLQSNKIYAKLSSLTTFMKENGYVPDLRWVLQD*RMIKKVRGYLF-IVRSCVI 301
           F AGD SH+Q N I AKL  L++ MK+ GYVPD   VL D    +K +  L+   +  V 
Sbjct: 249 FVAGDMSHVQMNPIRAKLQELSSAMKKAGYVPDTSLVLHDVAEEEKEQVLLWHSEKLAVA 308

Query: 300 FGLLNTPFSAWIPSRFALFLR---D*SDALRDPNALESK 193
           FGLLNTP  A  P R    LR   D  DA +  +A+E +
Sbjct: 309 FGLLNTP--AGSPIRVIKNLRVCKDCHDAAKLISAIEQR 345


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