BLASTX nr result

ID: Sinomenium22_contig00042284 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium22_contig00042284
         (398 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002518854.1| ring finger protein, putative [Ricinus commu...    57   3e-06
ref|XP_006343826.1| PREDICTED: RING-H2 zinc finger protein RHA4a...    56   5e-06

>ref|XP_002518854.1| ring finger protein, putative [Ricinus communis]
           gi|223541841|gb|EEF43387.1| ring finger protein,
           putative [Ricinus communis]
          Length = 265

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 27/59 (45%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
 Frame = +1

Query: 1   CIHHWLQANTTCPLCRC-SIISTTRLHSHSQQNPPFTNSQESNSDDQHPHQELTISHLE 174
           CIHHWL +NTTCPLCR   II TT+L +  Q   P T+    N D  + +  + I+ LE
Sbjct: 131 CIHHWLHSNTTCPLCRSFVIIPTTKLDNQDQSGGPDTSPPPYNQDHANSNHHIQIASLE 189


>ref|XP_006343826.1| PREDICTED: RING-H2 zinc finger protein RHA4a-like [Solanum
           tuberosum]
          Length = 152

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 23/58 (39%), Positives = 36/58 (62%)
 Frame = +1

Query: 1   CIHHWLQANTTCPLCRCSIISTTRLHSHSQQNPPFTNSQESNSDDQHPHQELTISHLE 174
           CI HWL++N +CPLCRC ++ T +     QQ PP  N+  S  +++  H ++T+S  E
Sbjct: 50  CIRHWLRSNFSCPLCRCHVLVTNKKPQPPQQ-PPSNNNPSSVIEEEREHHDITVSREE 106


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