BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium22_contig00042264
         (469 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004293756.1| PREDICTED: pentatricopeptide repeat-containi...    58   2e-06
ref|XP_006362578.1| PREDICTED: pentatricopeptide repeat-containi...    57   3e-06
ref|XP_006413926.1| hypothetical protein EUTSA_v10027430mg, part...    46   5e-06
ref|XP_007024941.1| Pentatricopeptide repeat superfamily protein...    56   6e-06
ref|XP_007024939.1| Pentatricopeptide repeat (PPR-like) superfam...    56   6e-06
ref|XP_004233900.1| PREDICTED: pentatricopeptide repeat-containi...    55   8e-06
ref|XP_002528370.1| pentatricopeptide repeat-containing protein,...    55   8e-06

>ref|XP_004293756.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g19890-like [Fragaria vesca subsp. vesca]
          Length = 705

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 27/50 (54%), Positives = 34/50 (68%)
 Frame = -1

Query: 214 WIRNFGLKLSIRKLTCEGKVEVVASFFHKFLDEDQNVDHIT*AAFMSACY 65
           WIR   +   +RKL CE KV + A FFHK +D+DQNVD +T  AF +ACY
Sbjct: 638 WIRT--VNTLVRKLCCEKKVGIAALFFHKLVDKDQNVDRVTLQAFTTACY 685


>ref|XP_006362578.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g19890-like isoform X1 [Solanum tuberosum]
           gi|565393841|ref|XP_006362579.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At4g19890-like isoform X2 [Solanum tuberosum]
           gi|565393843|ref|XP_006362580.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At4g19890-like isoform X3 [Solanum tuberosum]
          Length = 716

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 28/54 (51%), Positives = 36/54 (66%)
 Frame = -1

Query: 214 WIRNFGLKLSIRKLTCEGKVEVVASFFHKFLDEDQNVDHIT*AAFMSACYAATS 53
           WIR   +   +RKL  E  V+V A FFHK LD+ Q+VD +T AAFMSACY + +
Sbjct: 644 WIRT--VSTLVRKLCSEKNVDVAALFFHKLLDKQQSVDRVTLAAFMSACYESNN 695


>ref|XP_006413926.1| hypothetical protein EUTSA_v10027430mg, partial [Eutrema
           salsugineum] gi|557115096|gb|ESQ55379.1| hypothetical
           protein EUTSA_v10027430mg, partial [Eutrema salsugineum]
          Length = 677

 Score = 46.2 bits (108), Expect(2) = 5e-06
 Identities = 23/49 (46%), Positives = 31/49 (63%)
 Frame = -1

Query: 214 WIRNFGLKLSIRKLTCEGKVEVVASFFHKFLDEDQNVDHIT*AAFMSAC 68
           WIR   ++  +RKL  E K+ V A FF K L++D N D +T AAF +AC
Sbjct: 610 WIRT--VRTLVRKLCSEKKIGVAALFFQKLLEKDGNADRVTLAAFTTAC 656



 Score = 29.6 bits (65), Expect(2) = 5e-06
 Identities = 12/25 (48%), Positives = 19/25 (76%)
 Frame = -3

Query: 332 LH*SLIDKGHAPCEVTHMTMVHESC 258
           L+ ++IDKG +P EVT +T+ +E C
Sbjct: 566 LYEAMIDKGISPSEVTRVTIAYEYC 590


>ref|XP_007024941.1| Pentatricopeptide repeat superfamily protein [Theobroma cacao]
           gi|508780307|gb|EOY27563.1| Pentatricopeptide repeat
           superfamily protein [Theobroma cacao]
          Length = 738

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 27/50 (54%), Positives = 35/50 (70%)
 Frame = -1

Query: 214 WIRNFGLKLSIRKLTCEGKVEVVASFFHKFLDEDQNVDHIT*AAFMSACY 65
           W+R   +   IRKL  E KV + A FFH+ LD+D+NVD +T AAFM+ACY
Sbjct: 671 WMRT--VNTLIRKLCSEKKVGIAALFFHRLLDKDRNVDRVTLAAFMTACY 718


>ref|XP_007024939.1| Pentatricopeptide repeat (PPR-like) superfamily protein [Theobroma
           cacao] gi|508780305|gb|EOY27561.1| Pentatricopeptide
           repeat (PPR-like) superfamily protein [Theobroma cacao]
          Length = 692

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 27/50 (54%), Positives = 35/50 (70%)
 Frame = -1

Query: 214 WIRNFGLKLSIRKLTCEGKVEVVASFFHKFLDEDQNVDHIT*AAFMSACY 65
           W+R   +   IRKL  E KV + A FFH+ LD+D+NVD +T AAFM+ACY
Sbjct: 625 WMRT--VNTLIRKLCSEKKVGIAALFFHRLLDKDRNVDRVTLAAFMTACY 672


>ref|XP_004233900.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g19890-like [Solanum lycopersicum]
          Length = 716

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 31/62 (50%), Positives = 37/62 (59%)
 Frame = -1

Query: 250 TTPLLHWLPWTDWIRNFGLKLSIRKLTCEGKVEVVASFFHKFLDEDQNVDHIT*AAFMSA 71
           T  LL  L    W+R   +   +RKL  E  V V A FFHK LD+ Q+VD +T AAFMSA
Sbjct: 632 TMGLLDKLEKKLWVRT--VSTLVRKLCSEKNVNVAALFFHKLLDKQQSVDRVTLAAFMSA 689

Query: 70  CY 65
           CY
Sbjct: 690 CY 691


>ref|XP_002528370.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223532238|gb|EEF34042.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 712

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 30/50 (60%), Positives = 33/50 (66%)
 Frame = -1

Query: 214 WIRNFGLKLSIRKLTCEGKVEVVASFFHKFLDEDQNVDHIT*AAFMSACY 65
           WIR   +   IRKL  E KV V A FFHK LD+D NVD IT AAF +ACY
Sbjct: 645 WIRT--VNTLIRKLCSEKKVGVAALFFHKLLDKDLNVDRITLAAFTTACY 692