BLASTX nr result
ID: Sinomenium22_contig00042182
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium22_contig00042182
(660 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006488688.1| PREDICTED: uncharacterized protein LOC102623... 64 2e-33
ref|XP_006486503.1| PREDICTED: uncharacterized protein LOC102607... 69 2e-30
gb|AAF79618.1|AC027665_19 F5M15.26 [Arabidopsis thaliana] 67 7e-28
gb|AFU25705.1| gag-pol precursor [Castanea mollissima] 57 3e-27
ref|XP_004301972.1| PREDICTED: uncharacterized protein LOC101291... 65 7e-26
gb|AAD22505.1| putative retroelement gag/pol polyprotein [Arabid... 65 3e-25
ref|XP_004295848.1| PREDICTED: uncharacterized protein LOC101309... 64 3e-25
ref|XP_004308264.1| PREDICTED: uncharacterized protein LOC101303... 59 7e-24
ref|XP_006492207.1| PREDICTED: uncharacterized protein LOC102617... 62 7e-24
ref|XP_004295649.1| PREDICTED: uncharacterized protein LOC101312... 59 1e-23
gb|ABF97286.1| transposon protein, putative, unclassified [Oryza... 49 2e-23
gb|AAP05806.1| putative GAG-POL precursor [Oryza sativa Japonica... 49 2e-23
ref|NP_063998.1| orf764 gene product (mitochondrion) [Beta vulga... 49 2e-23
dbj|BAD66751.1| orf764 [Beta vulgaris subsp. vulgaris] 49 2e-23
gb|AAT77381.1| putative polyprotein [Oryza sativa Japonica Group] 52 4e-23
gb|AAO62321.1| putative GAG-POL precursor [Oryza sativa Japonica... 49 4e-23
gb|ABF96190.1| retrotransposon protein, putative, Ty3-gypsy subc... 49 4e-23
gb|AAV32140.1| putative polyprotein [Oryza sativa Japonica Group] 52 4e-23
gb|ABA96534.1| retrotransposon protein, putative, unclassified [... 49 7e-23
gb|ABA98352.1| transposon protein, putative, unclassified [Oryza... 47 1e-22
>ref|XP_006488688.1| PREDICTED: uncharacterized protein LOC102623105 [Citrus sinensis]
Length = 1407
Score = 63.5 bits (153), Expect(4) = 2e-33
Identities = 30/56 (53%), Positives = 41/56 (73%)
Frame = -3
Query: 658 PECDKAFQALKDYLENALLLAKPTLGEKLFLYLSVSDSTVSSALVRDDQGTQQPIF 491
P C++AF+ LK YL+ A LL+ P G+KL LYL+VSD SS LVR+++G Q PI+
Sbjct: 1141 PGCEEAFRNLKQYLQQAPLLSTPRDGDKLNLYLAVSDRAASSVLVREEEGVQYPIY 1196
Score = 63.5 bits (153), Expect(4) = 2e-33
Identities = 31/58 (53%), Positives = 40/58 (68%)
Frame = -2
Query: 491 YNSKSILDAESKYLEMQKLVLALIATARKLRPYFQAKAIVVFTKYLLQQILQKPKTLG 318
Y SK++LDAE++Y ++K LAL+ ARKLRPYFQA + V T L+QIL KP G
Sbjct: 1197 YTSKALLDAETRYPPLEKWALALVVAARKLRPYFQAFPVSVITNQPLRQILHKPDASG 1254
Score = 41.6 bits (96), Expect(4) = 2e-33
Identities = 17/35 (48%), Positives = 27/35 (77%)
Frame = -1
Query: 321 RVMK*VIELGKFDIEYKPCTSIKGQVLADFVSEMS 217
R++K +EL +FD++YKP +IK Q +ADFV+E +
Sbjct: 1255 RLVKWAVELSEFDMDYKPRAAIKAQAMADFVAEFA 1289
Score = 41.2 bits (95), Expect(4) = 2e-33
Identities = 18/44 (40%), Positives = 30/44 (68%)
Frame = -2
Query: 134 GSRAGLVLISHEGKKHMCQLSFDFVATNNEEEYDALLVGVKMVQ 3
GS AG+VL EG++ + +F ATNN+ EY+AL+ G+++ +
Sbjct: 1322 GSGAGIVLEGPEGEEISYAVKLEFAATNNQAEYEALIAGLELAR 1365
>ref|XP_006486503.1| PREDICTED: uncharacterized protein LOC102607673 [Citrus sinensis]
Length = 1866
Score = 68.6 bits (166), Expect(4) = 2e-30
Identities = 34/58 (58%), Positives = 42/58 (72%)
Frame = -2
Query: 491 YNSKSILDAESKYLEMQKLVLALIATARKLRPYFQAKAIVVFTKYLLQQILQKPKTLG 318
Y SK+++DAE++Y M+K LALI ARKLRPYFQA IVV T L+Q+LQKP G
Sbjct: 1184 YTSKALVDAETRYPPMEKWALALITAARKLRPYFQAHQIVVMTDQPLRQVLQKPDASG 1241
Score = 61.6 bits (148), Expect(4) = 2e-30
Identities = 27/56 (48%), Positives = 40/56 (71%)
Frame = -3
Query: 658 PECDKAFQALKDYLENALLLAKPTLGEKLFLYLSVSDSTVSSALVRDDQGTQQPIF 491
PEC++AF LK+YL A LL+ P G++L LYL++S SS LVR+++G Q P++
Sbjct: 1128 PECEEAFGQLKEYLARAPLLSTPREGDQLLLYLAISKRATSSVLVREEEGKQHPVY 1183
Score = 37.4 bits (85), Expect(4) = 2e-30
Identities = 17/40 (42%), Positives = 26/40 (65%)
Frame = -2
Query: 134 GSRAGLVLISHEGKKHMCQLSFDFVATNNEEEYDALLVGV 15
GS AG+V+ S EG + + F+F TNN+ EY+A + G+
Sbjct: 1309 GSGAGVVIRSPEGTEITYAVKFEFQLTNNQAEYEAFITGL 1348
Score = 32.0 bits (71), Expect(4) = 2e-30
Identities = 13/31 (41%), Positives = 21/31 (67%)
Frame = -1
Query: 321 RVMK*VIELGKFDIEYKPCTSIKGQVLADFV 229
R++K +EL +FD+ Y+P + K Q L DF+
Sbjct: 1242 RLVKWSVELSEFDLSYRPRGATKAQALVDFM 1272
>gb|AAF79618.1|AC027665_19 F5M15.26 [Arabidopsis thaliana]
Length = 1838
Score = 66.6 bits (161), Expect(4) = 7e-28
Identities = 30/55 (54%), Positives = 42/55 (76%)
Frame = -3
Query: 655 ECDKAFQALKDYLENALLLAKPTLGEKLFLYLSVSDSTVSSALVRDDQGTQQPIF 491
+ ++AF+ LKDYL +L KP +GE L+LY++VSD VSS LVR+D+G Q+PIF
Sbjct: 1094 DSEEAFEKLKDYLSTPPILVKPEVGETLYLYIAVSDHAVSSVLVREDRGEQRPIF 1148
Score = 55.1 bits (131), Expect(4) = 7e-28
Identities = 26/58 (44%), Positives = 38/58 (65%)
Frame = -2
Query: 491 YNSKSILDAESKYLEMQKLVLALIATARKLRPYFQAKAIVVFTKYLLQQILQKPKTLG 318
Y SKS+++AE++Y ++K LA++ +ARKLRPYFQ+ I V T L+ L P G
Sbjct: 1149 YTSKSLVEAETRYPVIEKAALAVVTSARKLRPYFQSHTIAVLTDQPLRVALHSPSQSG 1206
Score = 38.5 bits (88), Expect(4) = 7e-28
Identities = 17/42 (40%), Positives = 30/42 (71%)
Frame = -1
Query: 339 SEAKDIRVMK*VIELGKFDIEYKPCTSIKGQVLADFVSEMSL 214
S ++ R+ K +EL ++DI+++P ++K QVLADF+ E+ L
Sbjct: 1201 SPSQSGRMTKWAVELSEYDIDFRPRPAMKSQVLADFLIELPL 1242
Score = 30.4 bits (67), Expect(4) = 7e-28
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = -2
Query: 134 GSRAGLVLISHEGKKHMCQLSFDFVATNNEEEYDALLVGVKM 9
GS G+ L+S + FVATNN EY+ L+ G+++
Sbjct: 1269 GSGIGIRLVSPTAEVLEQSFRLRFVATNNVAEYEVLIAGLRL 1310
>gb|AFU25705.1| gag-pol precursor [Castanea mollissima]
Length = 1106
Score = 57.0 bits (136), Expect(4) = 3e-27
Identities = 26/58 (44%), Positives = 40/58 (68%)
Frame = -3
Query: 655 ECDKAFQALKDYLENALLLAKPTLGEKLFLYLSVSDSTVSSALVRDDQGTQQPIFTIA 482
EC+ AF+ L+ YL N L+L++P E L+ YL+V + VS L+R+D G Q+PI+ I+
Sbjct: 363 ECNLAFEDLRQYLANPLILSRPEKKEVLYAYLAVMNYAVSLVLIRNDDGVQKPIYYIS 420
Score = 52.0 bits (123), Expect(4) = 3e-27
Identities = 26/53 (49%), Positives = 37/53 (69%)
Frame = -2
Query: 491 YNSKSILDAESKYLEMQKLVLALIATARKLRPYFQAKAIVVFTKYLLQQILQK 333
Y SKS+ +AE +YL ++K +LA++ RKL YFQA IVV T+ LQ I++K
Sbjct: 418 YISKSLQEAERRYLPLEKALLAVVHATRKLPHYFQAHTIVVLTQLPLQAIMRK 470
Score = 40.8 bits (94), Expect(4) = 3e-27
Identities = 21/46 (45%), Positives = 29/46 (63%)
Frame = -2
Query: 140 KAGSRAGLVLISHEGKKHMCQLSFDFVATNNEEEYDALLVGVKMVQ 3
+ G+ G+VLI+ E L F+ATNNE EY+ALL G +MV+
Sbjct: 544 RKGAGIGVVLITPEKLVMEKSLRLGFIATNNEAEYEALLAGAQMVR 589
Score = 38.5 bits (88), Expect(4) = 3e-27
Identities = 18/35 (51%), Positives = 25/35 (71%)
Frame = -1
Query: 321 RVMK*VIELGKFDIEYKPCTSIKGQVLADFVSEMS 217
RV K +LG +D++Y P T+IKGQ L DFV+E +
Sbjct: 476 RVAKWGTKLGAYDVKYMPRTAIKGQDLVDFVAEFT 510
>ref|XP_004301972.1| PREDICTED: uncharacterized protein LOC101291061 [Fragaria vesca
subsp. vesca]
Length = 567
Score = 64.7 bits (156), Expect(3) = 7e-26
Identities = 33/58 (56%), Positives = 40/58 (68%)
Frame = -2
Query: 491 YNSKSILDAESKYLEMQKLVLALIATARKLRPYFQAKAIVVFTKYLLQQILQKPKTLG 318
Y SK +DAE +Y E++KL ALI ARKLRPYFQA I V T L+Q+L KP+T G
Sbjct: 105 YVSKGFVDAEFRYPEIEKLAFALITLARKLRPYFQAHTIKVMTNQPLKQVLWKPETSG 162
Score = 53.9 bits (128), Expect(3) = 7e-26
Identities = 24/58 (41%), Positives = 42/58 (72%)
Frame = -3
Query: 655 ECDKAFQALKDYLENALLLAKPTLGEKLFLYLSVSDSTVSSALVRDDQGTQQPIFTIA 482
EC+KAF LK+++ A +L+KP G+ L +YLSVS + +SS LVR+++ ++ I+ ++
Sbjct: 50 ECEKAFINLKEHMGKAPVLSKPRSGDVLLIYLSVSTAAISSVLVREEEKHEEAIYYVS 107
Score = 45.4 bits (106), Expect(3) = 7e-26
Identities = 18/35 (51%), Positives = 28/35 (80%)
Frame = -1
Query: 321 RVMK*VIELGKFDIEYKPCTSIKGQVLADFVSEMS 217
R++K +ELG+FDI Y P T++KGQ +ADF+S+ +
Sbjct: 163 RLVKCAVELGEFDIHYSPRTAVKGQAIADFISKFT 197
>gb|AAD22505.1| putative retroelement gag/pol polyprotein [Arabidopsis thaliana]
Length = 1212
Score = 65.5 bits (158), Expect(3) = 3e-25
Identities = 28/60 (46%), Positives = 44/60 (73%)
Frame = -3
Query: 652 CDKAFQALKDYLENALLLAKPTLGEKLFLYLSVSDSTVSSALVRDDQGTQQPIFTIASLY 473
C++AF+ LK YL L+LAKP GE+LFLY+SVS++ +S LVR ++ ++PIF ++ +
Sbjct: 592 CEEAFRQLKSYLSEPLVLAKPEFGERLFLYISVSENAISGVLVRVERSDERPIFYVSKSF 651
Score = 58.9 bits (141), Expect(3) = 3e-25
Identities = 30/58 (51%), Positives = 37/58 (63%)
Frame = -2
Query: 491 YNSKSILDAESKYLEMQKLVLALIATARKLRPYFQAKAIVVFTKYLLQQILQKPKTLG 318
Y SKS D E++Y M+KL LA++ ARKLRPYFQ+ IVV T L+ IL P G
Sbjct: 646 YVSKSFSDVETRYPMMEKLALAVVTAARKLRPYFQSHPIVVLTSLPLRTILHSPNQSG 703
Score = 37.7 bits (86), Expect(3) = 3e-25
Identities = 18/36 (50%), Positives = 26/36 (72%)
Frame = -1
Query: 321 RVMK*VIELGKFDIEYKPCTSIKGQVLADFVSEMSL 214
R+ K IEL +F++E+ TS+K QVLADF+ E+ L
Sbjct: 704 RLAKWAIELSEFNLEFHARTSLKSQVLADFLIELPL 739
>ref|XP_004295848.1| PREDICTED: uncharacterized protein LOC101309919 [Fragaria vesca
subsp. vesca]
Length = 284
Score = 63.5 bits (153), Expect(4) = 3e-25
Identities = 32/58 (55%), Positives = 40/58 (68%)
Frame = -2
Query: 491 YNSKSILDAESKYLEMQKLVLALIATARKLRPYFQAKAIVVFTKYLLQQILQKPKTLG 318
Y + D E++Y ++KL LALI TARKLR YFQA I V T + L+QILQKP+T G
Sbjct: 120 YYGRGFADPETRYPNIEKLALALITTARKLRQYFQAHTIHVLTNHPLRQILQKPETSG 177
Score = 45.4 bits (106), Expect(4) = 3e-25
Identities = 20/33 (60%), Positives = 27/33 (81%)
Frame = -1
Query: 321 RVMK*VIELGKFDIEYKPCTSIKGQVLADFVSE 223
R++K IELG+FDI +KP T+IKGQ ADF++E
Sbjct: 178 RMVKWAIELGEFDIHFKPRTAIKGQAAADFIAE 210
Score = 41.2 bits (95), Expect(4) = 3e-25
Identities = 18/38 (47%), Positives = 27/38 (71%)
Frame = -3
Query: 604 LLAKPTLGEKLFLYLSVSDSTVSSALVRDDQGTQQPIF 491
LL+KP LGE L+LYL VS + +S+AL R + + P++
Sbjct: 82 LLSKPILGEVLYLYLVVSATAISAALTRHEHNNELPVY 119
Score = 31.6 bits (70), Expect(4) = 3e-25
Identities = 13/39 (33%), Positives = 24/39 (61%)
Frame = -2
Query: 125 AGLVLISHEGKKHMCQLSFDFVATNNEEEYDALLVGVKM 9
A +++ EG + L F+F +NN EY+AL+ G+++
Sbjct: 245 ARIIITDLEGHSYEYALRFEFKESNNIAEYEALVAGIQL 283
>ref|XP_004308264.1| PREDICTED: uncharacterized protein LOC101303566 [Fragaria vesca
subsp. vesca]
Length = 512
Score = 59.3 bits (142), Expect(4) = 7e-24
Identities = 30/58 (51%), Positives = 39/58 (67%)
Frame = -2
Query: 491 YNSKSILDAESKYLEMQKLVLALIATARKLRPYFQAKAIVVFTKYLLQQILQKPKTLG 318
Y + D E++Y +++KL LALI ARKLR YFQA V T + L+QILQKP+T G
Sbjct: 111 YCGRGFTDPETRYPDIEKLALALITVARKLRQYFQAHTNHVLTNHPLRQILQKPETSG 168
Score = 50.1 bits (118), Expect(4) = 7e-24
Identities = 25/56 (44%), Positives = 36/56 (64%)
Frame = -3
Query: 658 PECDKAFQALKDYLENALLLAKPTLGEKLFLYLSVSDSTVSSALVRDDQGTQQPIF 491
PE D AF +K YL LL+K GE L+LYL+VS +T+++AL R + Q P++
Sbjct: 55 PEHDDAFNNIKAYLVVVPLLSKHVQGEVLYLYLAVSATTINAALTRHEHDNQLPVY 110
Score = 35.8 bits (81), Expect(4) = 7e-24
Identities = 16/44 (36%), Positives = 26/44 (59%)
Frame = -2
Query: 140 KAGSRAGLVLISHEGKKHMCQLSFDFVATNNEEEYDALLVGVKM 9
K S AG+++ EG + L F+F A+NN EY L+ G+++
Sbjct: 191 KGLSGAGIIITDLEGNSYEYALRFEFKASNNIAEYKVLIAGIQL 234
Score = 31.6 bits (70), Expect(4) = 7e-24
Identities = 13/23 (56%), Positives = 19/23 (82%)
Frame = -1
Query: 318 VMK*VIELGKFDIEYKPCTSIKG 250
++K IELG+FD+ +KP T+IKG
Sbjct: 170 MVKWAIELGEFDLHFKPRTAIKG 192
>ref|XP_006492207.1| PREDICTED: uncharacterized protein LOC102617447 [Citrus sinensis]
Length = 1100
Score = 61.6 bits (148), Expect(3) = 7e-24
Identities = 27/55 (49%), Positives = 41/55 (74%)
Frame = -3
Query: 655 ECDKAFQALKDYLENALLLAKPTLGEKLFLYLSVSDSTVSSALVRDDQGTQQPIF 491
EC++AF LK+YL +A LL+ P G++LFLYL++S SS LVR+++G Q P++
Sbjct: 742 ECEEAFGQLKEYLAHAPLLSTPREGDQLFLYLAISKRATSSVLVREEEGKQHPVY 796
Score = 60.1 bits (144), Expect(3) = 7e-24
Identities = 30/58 (51%), Positives = 39/58 (67%)
Frame = -2
Query: 491 YNSKSILDAESKYLEMQKLVLALIATARKLRPYFQAKAIVVFTKYLLQQILQKPKTLG 318
Y SK+++DAE++Y M+K ALI RK RPYFQA I+V T L+Q+LQKP G
Sbjct: 797 YTSKALVDAETRYPLMEKWAQALITATRKPRPYFQAHPIIVMTDQPLRQMLQKPDASG 854
Score = 35.4 bits (80), Expect(3) = 7e-24
Identities = 15/31 (48%), Positives = 23/31 (74%)
Frame = -1
Query: 321 RVMK*VIELGKFDIEYKPCTSIKGQVLADFV 229
R++K +EL +FD+ Y+P +IK Q LADF+
Sbjct: 855 RLVKWSVELSEFDLSYRPRGAIKAQALADFM 885
>ref|XP_004295649.1| PREDICTED: uncharacterized protein LOC101312238 [Fragaria vesca
subsp. vesca]
Length = 591
Score = 58.9 bits (141), Expect(3) = 1e-23
Identities = 29/58 (50%), Positives = 41/58 (70%)
Frame = -2
Query: 491 YNSKSILDAESKYLEMQKLVLALIATARKLRPYFQAKAIVVFTKYLLQQILQKPKTLG 318
Y K AES+Y +++KL LALI TA+KL+ YFQA +I +FT L+Q+L+KP+ G
Sbjct: 178 YVGKGFTLAESRYPDLEKLALALIVTAQKLQHYFQAHSITLFTNCPLRQVLEKPEASG 235
Score = 55.1 bits (131), Expect(3) = 1e-23
Identities = 24/57 (42%), Positives = 41/57 (71%)
Frame = -3
Query: 655 ECDKAFQALKDYLENALLLAKPTLGEKLFLYLSVSDSTVSSALVRDDQGTQQPIFTI 485
E ++AF+ +K+YL + L+L+KP GE L+LYL+ D+TVS AL++ D + P++ +
Sbjct: 123 EQEEAFRKIKEYLASVLMLSKPIPGEMLYLYLAAFDTTVSLALIKKDDVIELPVYYV 179
Score = 42.7 bits (99), Expect(3) = 1e-23
Identities = 19/41 (46%), Positives = 29/41 (70%)
Frame = -1
Query: 321 RVMK*VIELGKFDIEYKPCTSIKGQVLADFVSEMSLIEKSE 199
R+ K I+LG+FDI Y P ++KGQ ADF+SE++ ++ E
Sbjct: 236 RLAKWAIKLGEFDIHYVPRVAMKGQTAADFISELTPMKNDE 276
>gb|ABF97286.1| transposon protein, putative, unclassified [Oryza sativa Japonica
Group]
Length = 1515
Score = 48.5 bits (114), Expect(4) = 2e-23
Identities = 22/58 (37%), Positives = 40/58 (68%)
Frame = -2
Query: 491 YNSKSILDAESKYLEMQKLVLALIATARKLRPYFQAKAIVVFTKYLLQQILQKPKTLG 318
Y S+++ DA+++Y +QKL+ A+I T+RKLR YFQA + V + + L ++++ +G
Sbjct: 821 YVSEALHDAKTRYPHIQKLLYAVIMTSRKLRHYFQAHRVTVVSSFPLGEVVRNKDVVG 878
Score = 46.2 bits (108), Expect(4) = 2e-23
Identities = 21/58 (36%), Positives = 38/58 (65%)
Frame = -3
Query: 655 ECDKAFQALKDYLENALLLAKPTLGEKLFLYLSVSDSTVSSALVRDDQGTQQPIFTIA 482
E ++AF ALK YL N +L P E+LFLY++ + +VS+ +V + + Q+P++ ++
Sbjct: 766 EAEEAFIALKRYLSNPPVLVAPQPNEELFLYITATPYSVSTVIVVETEKIQRPVYYVS 823
Score = 42.7 bits (99), Expect(4) = 2e-23
Identities = 20/41 (48%), Positives = 31/41 (75%), Gaps = 2/41 (4%)
Frame = -1
Query: 330 KDI--RVMK*VIELGKFDIEYKPCTSIKGQVLADFVSEMSL 214
KD+ R+ K V+EL +FDI + P T+IK Q+LADFV++ ++
Sbjct: 874 KDVVGRIAKWVVELSQFDIHFVPRTAIKSQILADFVADWTM 914
Score = 37.7 bits (86), Expect(4) = 2e-23
Identities = 17/41 (41%), Positives = 25/41 (60%)
Frame = -2
Query: 134 GSRAGLVLISHEGKKHMCQLSFDFVATNNEEEYDALLVGVK 12
G+RAG +L S G + + +F ATNN EY+ LL G++
Sbjct: 940 GARAGFILTSLSGDQFKHAIHLNFRATNNTAEYEGLLAGIR 980
>gb|AAP05806.1| putative GAG-POL precursor [Oryza sativa Japonica Group]
gi|50399970|gb|AAT76358.1| putative GAG-POL precursor
[Oryza sativa Japonica Group]
Length = 964
Score = 48.5 bits (114), Expect(4) = 2e-23
Identities = 22/58 (37%), Positives = 40/58 (68%)
Frame = -2
Query: 491 YNSKSILDAESKYLEMQKLVLALIATARKLRPYFQAKAIVVFTKYLLQQILQKPKTLG 318
Y S+++ DA+++Y +QKL+ A+I T+RKLR YFQA + V + + L ++++ +G
Sbjct: 270 YVSEALHDAKTRYPHIQKLLYAVIMTSRKLRHYFQAHRVTVVSSFPLGEVVRNKDVVG 327
Score = 46.2 bits (108), Expect(4) = 2e-23
Identities = 21/58 (36%), Positives = 38/58 (65%)
Frame = -3
Query: 655 ECDKAFQALKDYLENALLLAKPTLGEKLFLYLSVSDSTVSSALVRDDQGTQQPIFTIA 482
E ++AF ALK YL N +L P E+LFLY++ + +VS+ +V + + Q+P++ ++
Sbjct: 215 EAEEAFIALKRYLSNPPVLVAPQPNEELFLYITATPYSVSTVIVVETEKIQRPVYYVS 272
Score = 42.7 bits (99), Expect(4) = 2e-23
Identities = 20/41 (48%), Positives = 31/41 (75%), Gaps = 2/41 (4%)
Frame = -1
Query: 330 KDI--RVMK*VIELGKFDIEYKPCTSIKGQVLADFVSEMSL 214
KD+ R+ K V+EL +FDI + P T+IK Q+LADFV++ ++
Sbjct: 323 KDVVGRIAKWVVELSQFDIHFVPRTAIKSQILADFVADWTM 363
Score = 37.7 bits (86), Expect(4) = 2e-23
Identities = 17/41 (41%), Positives = 25/41 (60%)
Frame = -2
Query: 134 GSRAGLVLISHEGKKHMCQLSFDFVATNNEEEYDALLVGVK 12
G+RAG +L S G + + +F ATNN EY+ LL G++
Sbjct: 389 GARAGFILTSLSGDQFKHAIHLNFRATNNTAEYEGLLAGIR 429
>ref|NP_063998.1| orf764 gene product (mitochondrion) [Beta vulgaris subsp. vulgaris]
gi|323435157|ref|YP_004222375.1| hypothetical protein
BevumaM_p142 [Beta vulgaris subsp. maritima]
gi|346683249|ref|YP_004842181.1| hypothetical protein
BemaM_p137 [Beta macrocarpa] gi|9049300|dbj|BAA99310.1|
orf764 [Beta vulgaris subsp. vulgaris]
gi|317905608|emb|CBJ14014.1| hypothetical protein [Beta
vulgaris subsp. maritima] gi|319439890|emb|CBJ17590.1|
hypothetical protein [Beta vulgaris subsp. maritima]
gi|320148045|emb|CBJ20708.1| hypothetical protein [Beta
vulgaris subsp. maritima] gi|345500167|emb|CBX24986.1|
hypothetical protein [Beta macrocarpa]
gi|384977907|emb|CBL54131.1| hypothetical protein
(mitochondrion) [Beta vulgaris subsp. maritima]
Length = 764
Score = 48.9 bits (115), Expect(4) = 2e-23
Identities = 26/64 (40%), Positives = 39/64 (60%)
Frame = -2
Query: 509 YTTTHIYNSKSILDAESKYLEMQKLVLALIATARKLRPYFQAKAIVVFTKYLLQQILQKP 330
Y +H+ N +AE +Y ++K+ LA++ ARKLRPYF A I V + + L++ LQK
Sbjct: 93 YFVSHVLN-----EAEQRYPLLEKMSLAVMIAARKLRPYFDAHTIQVLSNHPLEKALQKL 147
Query: 329 KTLG 318
T G
Sbjct: 148 DTSG 151
Score = 45.8 bits (107), Expect(4) = 2e-23
Identities = 20/41 (48%), Positives = 30/41 (73%)
Frame = -1
Query: 321 RVMK*VIELGKFDIEYKPCTSIKGQVLADFVSEMSLIEKSE 199
R+++ +EL +F++EYKP T+IK Q LADF+ E S E+ E
Sbjct: 152 RLLRWAVELSEFEVEYKPRTAIKAQALADFIVEASYEEEEE 192
Score = 41.6 bits (96), Expect(4) = 2e-23
Identities = 20/54 (37%), Positives = 35/54 (64%)
Frame = -3
Query: 643 AFQALKDYLENALLLAKPTLGEKLFLYLSVSDSTVSSALVRDDQGTQQPIFTIA 482
AF A+K++L+ + +P GE+L LY+S S TV++ L+ + TQ PI+ ++
Sbjct: 43 AFAAIKEHLKKLPTVTRPKEGERLQLYISASPKTVAAVLLVERIKTQLPIYFVS 96
Score = 38.9 bits (89), Expect(4) = 2e-23
Identities = 18/44 (40%), Positives = 30/44 (68%)
Frame = -2
Query: 140 KAGSRAGLVLISHEGKKHMCQLSFDFVATNNEEEYDALLVGVKM 9
+ GS AG+++ S EG ++ + + F A+NNE EY+A + G+KM
Sbjct: 207 QTGSGAGIIMTSPEG--NVFEYAIKFKASNNEAEYEAAIAGIKM 248
>dbj|BAD66751.1| orf764 [Beta vulgaris subsp. vulgaris]
Length = 764
Score = 48.9 bits (115), Expect(4) = 2e-23
Identities = 26/64 (40%), Positives = 39/64 (60%)
Frame = -2
Query: 509 YTTTHIYNSKSILDAESKYLEMQKLVLALIATARKLRPYFQAKAIVVFTKYLLQQILQKP 330
Y +H+ N +AE +Y ++K+ LA++ ARKLRPYF A I V + + L++ LQK
Sbjct: 93 YFVSHVLN-----EAEQRYPLLEKMSLAVMIAARKLRPYFDAHTIQVLSNHPLEKALQKL 147
Query: 329 KTLG 318
T G
Sbjct: 148 DTSG 151
Score = 45.8 bits (107), Expect(4) = 2e-23
Identities = 20/41 (48%), Positives = 30/41 (73%)
Frame = -1
Query: 321 RVMK*VIELGKFDIEYKPCTSIKGQVLADFVSEMSLIEKSE 199
R+++ +EL +F++EYKP T+IK Q LADF+ E S E+ E
Sbjct: 152 RLLRWAVELSEFEVEYKPRTAIKAQALADFIVEASYEEEEE 192
Score = 41.6 bits (96), Expect(4) = 2e-23
Identities = 20/54 (37%), Positives = 35/54 (64%)
Frame = -3
Query: 643 AFQALKDYLENALLLAKPTLGEKLFLYLSVSDSTVSSALVRDDQGTQQPIFTIA 482
AF A+K++L+ + +P GE+L LY+S S TV++ L+ + TQ PI+ ++
Sbjct: 43 AFAAIKEHLKKLPTVTRPKEGERLQLYISASPKTVAAVLLVERIKTQLPIYFVS 96
Score = 38.9 bits (89), Expect(4) = 2e-23
Identities = 18/44 (40%), Positives = 30/44 (68%)
Frame = -2
Query: 140 KAGSRAGLVLISHEGKKHMCQLSFDFVATNNEEEYDALLVGVKM 9
+ GS AG+++ S EG ++ + + F A+NNE EY+A + G+KM
Sbjct: 207 QTGSGAGIIMTSPEG--NVFEYAIKFKASNNEAEYEAAIAGIKM 248
>gb|AAT77381.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1672
Score = 51.6 bits (122), Expect(4) = 4e-23
Identities = 23/58 (39%), Positives = 42/58 (72%)
Frame = -2
Query: 491 YNSKSILDAESKYLEMQKLVLALIATARKLRPYFQAKAIVVFTKYLLQQILQKPKTLG 318
Y S+++ DA+++YL++QKL+ A+I T+RKLR YFQA + V + + L ++++ +G
Sbjct: 1013 YVSEALHDAKTRYLQIQKLLYAVIMTSRKLRHYFQAHRVTVVSSFPLGEVVRNKDIVG 1070
Score = 43.9 bits (102), Expect(4) = 4e-23
Identities = 22/43 (51%), Positives = 32/43 (74%), Gaps = 2/43 (4%)
Frame = -1
Query: 330 KDI--RVMK*VIELGKFDIEYKPCTSIKGQVLADFVSEMSLIE 208
KDI R+ K V+EL +FD+ + P T+IK QVLADFV++ ++ E
Sbjct: 1066 KDIVGRIAKWVVELSQFDVHFLPRTAIKSQVLADFVADWNMPE 1108
Score = 43.1 bits (100), Expect(4) = 4e-23
Identities = 20/58 (34%), Positives = 37/58 (63%)
Frame = -3
Query: 655 ECDKAFQALKDYLENALLLAKPTLGEKLFLYLSVSDSTVSSALVRDDQGTQQPIFTIA 482
E ++AF ALK L N +L P E+LFLY++ + +VS+ +V + + Q+P++ ++
Sbjct: 958 EAEEAFIALKRNLSNPPVLVSPQPNEELFLYIAATPYSVSTVIVVEREKVQRPVYYVS 1015
Score = 35.4 bits (80), Expect(4) = 4e-23
Identities = 16/41 (39%), Positives = 24/41 (58%)
Frame = -2
Query: 134 GSRAGLVLISHEGKKHMCQLSFDFVATNNEEEYDALLVGVK 12
G+ AG +L S G + + +F ATNN EY+ LL G++
Sbjct: 1132 GAGAGFILTSPSGDQFKHAIHLNFRATNNTAEYEGLLAGIR 1172
>gb|AAO62321.1| putative GAG-POL precursor [Oryza sativa Japonica Group]
Length = 1665
Score = 49.3 bits (116), Expect(4) = 4e-23
Identities = 22/58 (37%), Positives = 41/58 (70%)
Frame = -2
Query: 491 YNSKSILDAESKYLEMQKLVLALIATARKLRPYFQAKAIVVFTKYLLQQILQKPKTLG 318
Y S+++ DA+++Y ++QKL+ A+I T+RKLR YFQA + V + + L ++++ +G
Sbjct: 1026 YVSEALHDAKTRYPQIQKLLYAVIMTSRKLRHYFQAHRVTVVSSFPLGEVVRNKDVVG 1083
Score = 48.5 bits (114), Expect(4) = 4e-23
Identities = 22/58 (37%), Positives = 38/58 (65%)
Frame = -3
Query: 655 ECDKAFQALKDYLENALLLAKPTLGEKLFLYLSVSDSTVSSALVRDDQGTQQPIFTIA 482
E +KAF ALK YL N+ +L P E+LFLY+ + +VS+ +V + + Q+P++ ++
Sbjct: 971 EAEKAFIALKRYLSNSPVLVAPQTNEELFLYIVATPHSVSTVIVVEREKVQRPVYYVS 1028
Score = 40.8 bits (94), Expect(4) = 4e-23
Identities = 19/41 (46%), Positives = 30/41 (73%), Gaps = 2/41 (4%)
Frame = -1
Query: 330 KDI--RVMK*VIELGKFDIEYKPCTSIKGQVLADFVSEMSL 214
KD+ R+ K V+EL +FD+ + P T+IK QVL DFV++ ++
Sbjct: 1079 KDVVGRIAKWVVELSQFDVHFVPRTAIKSQVLIDFVADWTM 1119
Score = 35.4 bits (80), Expect(4) = 4e-23
Identities = 16/41 (39%), Positives = 24/41 (58%)
Frame = -2
Query: 134 GSRAGLVLISHEGKKHMCQLSFDFVATNNEEEYDALLVGVK 12
G+ AG +L S G + + +F ATNN EY+ LL G++
Sbjct: 1145 GAGAGFILTSPSGDQFKHAIHLNFRATNNTAEYEGLLAGIR 1185
>gb|ABF96190.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1602
Score = 49.3 bits (116), Expect(4) = 4e-23
Identities = 22/58 (37%), Positives = 41/58 (70%)
Frame = -2
Query: 491 YNSKSILDAESKYLEMQKLVLALIATARKLRPYFQAKAIVVFTKYLLQQILQKPKTLG 318
Y S+++ DA+++Y ++QKL+ A+I T+RKLR YFQA + V + + L ++++ +G
Sbjct: 963 YVSEALHDAKTRYPQIQKLLYAVIMTSRKLRHYFQAHRVTVVSSFPLGEVVRNKDVVG 1020
Score = 48.5 bits (114), Expect(4) = 4e-23
Identities = 22/58 (37%), Positives = 38/58 (65%)
Frame = -3
Query: 655 ECDKAFQALKDYLENALLLAKPTLGEKLFLYLSVSDSTVSSALVRDDQGTQQPIFTIA 482
E +KAF ALK YL N+ +L P E+LFLY+ + +VS+ +V + + Q+P++ ++
Sbjct: 908 EAEKAFIALKRYLSNSPVLVAPQTNEELFLYIVATPHSVSTVIVVEREKVQRPVYYVS 965
Score = 40.8 bits (94), Expect(4) = 4e-23
Identities = 19/41 (46%), Positives = 30/41 (73%), Gaps = 2/41 (4%)
Frame = -1
Query: 330 KDI--RVMK*VIELGKFDIEYKPCTSIKGQVLADFVSEMSL 214
KD+ R+ K V+EL +FD+ + P T+IK QVL DFV++ ++
Sbjct: 1016 KDVVGRIAKWVVELSQFDVHFVPRTAIKSQVLIDFVADWTM 1056
Score = 35.4 bits (80), Expect(4) = 4e-23
Identities = 16/41 (39%), Positives = 24/41 (58%)
Frame = -2
Query: 134 GSRAGLVLISHEGKKHMCQLSFDFVATNNEEEYDALLVGVK 12
G+ AG +L S G + + +F ATNN EY+ LL G++
Sbjct: 1082 GAGAGFILTSPSGDQFKHAIHLNFRATNNTAEYEGLLAGIR 1122
>gb|AAV32140.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1302
Score = 51.6 bits (122), Expect(4) = 4e-23
Identities = 23/58 (39%), Positives = 42/58 (72%)
Frame = -2
Query: 491 YNSKSILDAESKYLEMQKLVLALIATARKLRPYFQAKAIVVFTKYLLQQILQKPKTLG 318
Y S+++ DA+++YL++QKL+ A+I T+RKLR YFQA + V + + L ++++ +G
Sbjct: 721 YVSEALHDAKTRYLQIQKLLYAVIMTSRKLRHYFQAHRVTVVSSFPLGEVVRNKDIVG 778
Score = 43.9 bits (102), Expect(4) = 4e-23
Identities = 22/43 (51%), Positives = 32/43 (74%), Gaps = 2/43 (4%)
Frame = -1
Query: 330 KDI--RVMK*VIELGKFDIEYKPCTSIKGQVLADFVSEMSLIE 208
KDI R+ K V+EL +FD+ + P T+IK QVLADFV++ ++ E
Sbjct: 774 KDIVGRIAKWVVELSQFDVHFLPRTAIKSQVLADFVADWNMPE 816
Score = 43.1 bits (100), Expect(4) = 4e-23
Identities = 20/58 (34%), Positives = 37/58 (63%)
Frame = -3
Query: 655 ECDKAFQALKDYLENALLLAKPTLGEKLFLYLSVSDSTVSSALVRDDQGTQQPIFTIA 482
E ++AF ALK L N +L P E+LFLY++ + +VS+ +V + + Q+P++ ++
Sbjct: 666 EAEEAFIALKRNLSNPPVLVSPQPNEELFLYIAATPYSVSTVIVVEREKVQRPVYYVS 723
Score = 35.4 bits (80), Expect(4) = 4e-23
Identities = 16/41 (39%), Positives = 24/41 (58%)
Frame = -2
Query: 134 GSRAGLVLISHEGKKHMCQLSFDFVATNNEEEYDALLVGVK 12
G+ AG +L S G + + +F ATNN EY+ LL G++
Sbjct: 840 GAGAGFILTSPSGDQFKHAIHLNFRATNNTAEYEGLLAGIR 880
>gb|ABA96534.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 753
Score = 48.9 bits (115), Expect(4) = 7e-23
Identities = 20/58 (34%), Positives = 41/58 (70%)
Frame = -2
Query: 491 YNSKSILDAESKYLEMQKLVLALIATARKLRPYFQAKAIVVFTKYLLQQILQKPKTLG 318
Y S+++ D +++Y ++QKL+ A+I T+R+LR YFQA ++V + + L ++++ +G
Sbjct: 244 YVSEALHDVKTRYSQIQKLLYAVIMTSRRLRHYFQAHRVIVVSSFPLSEVMRNRDVVG 301
Score = 44.7 bits (104), Expect(4) = 7e-23
Identities = 20/58 (34%), Positives = 37/58 (63%)
Frame = -3
Query: 655 ECDKAFQALKDYLENALLLAKPTLGEKLFLYLSVSDSTVSSALVRDDQGTQQPIFTIA 482
E ++ F ALK YL N +L P E+LFLY++ + +VS+ +V + + Q+P++ ++
Sbjct: 189 EAEEPFVALKRYLSNPPVLVAPQPNEELFLYIAATPYSVSTVIVVERERVQRPVYYVS 246
Score = 43.1 bits (100), Expect(4) = 7e-23
Identities = 18/36 (50%), Positives = 29/36 (80%)
Frame = -1
Query: 321 RVMK*VIELGKFDIEYKPCTSIKGQVLADFVSEMSL 214
R++K V+EL +FD+ + P T+IK QVLADFV++ ++
Sbjct: 302 RIVKWVVELSQFDVHFVPRTAIKSQVLADFVADWTM 337
Score = 36.6 bits (83), Expect(4) = 7e-23
Identities = 16/43 (37%), Positives = 25/43 (58%)
Frame = -2
Query: 134 GSRAGLVLISHEGKKHMCQLSFDFVATNNEEEYDALLVGVKMV 6
G+ AG +L S G + + +F ATNN EY+ LL G++ +
Sbjct: 363 GAGAGFILTSPSGDQFKHAIQLNFRATNNTAEYEGLLAGIRAI 405
>gb|ABA98352.1| transposon protein, putative, unclassified [Oryza sativa Japonica
Group]
Length = 569
Score = 47.0 bits (110), Expect(4) = 1e-22
Identities = 22/58 (37%), Positives = 37/58 (63%)
Frame = -3
Query: 655 ECDKAFQALKDYLENALLLAKPTLGEKLFLYLSVSDSTVSSALVRDDQGTQQPIFTIA 482
E +AF ALK YL N +L P E+LFLY++ + +VS+ +V + + QQP++ ++
Sbjct: 95 EAKEAFIALKRYLSNPPILVAPQPNEELFLYIAATPYSVSTVIVVEREKVQQPVYYVS 152
Score = 46.2 bits (108), Expect(4) = 1e-22
Identities = 22/58 (37%), Positives = 38/58 (65%)
Frame = -2
Query: 491 YNSKSILDAESKYLEMQKLVLALIATARKLRPYFQAKAIVVFTKYLLQQILQKPKTLG 318
Y S ++ D +++Y ++QKL+ A+I T+RKLR YFQA + V + L ++++ LG
Sbjct: 150 YVSDALHDTKTRYPQIQKLLYAVIMTSRKLRHYFQAHRVTVVSSCPLGEVVRNKDVLG 207
Score = 43.9 bits (102), Expect(4) = 1e-22
Identities = 21/41 (51%), Positives = 32/41 (78%), Gaps = 2/41 (4%)
Frame = -1
Query: 330 KDI--RVMK*VIELGKFDIEYKPCTSIKGQVLADFVSEMSL 214
KD+ R++K V+EL +FDI + P T+IK QVLADFV++ ++
Sbjct: 203 KDVLGRIVKWVVELSQFDIRFVPRTAIKSQVLADFVADWTM 243
Score = 35.4 bits (80), Expect(4) = 1e-22
Identities = 16/41 (39%), Positives = 24/41 (58%)
Frame = -2
Query: 134 GSRAGLVLISHEGKKHMCQLSFDFVATNNEEEYDALLVGVK 12
G+ AG +L S G + + +F ATNN EY+ LL G++
Sbjct: 269 GAGAGFILTSPSGDQFKHAIHLNFRATNNTAEYEGLLAGIR 309