BLASTX nr result

ID: Sinomenium22_contig00040487 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium22_contig00040487
         (380 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002518274.1| conserved hypothetical protein [Ricinus comm...    99   8e-19
emb|CAN71465.1| hypothetical protein VITISV_038986 [Vitis vinifera]    57   5e-10

>ref|XP_002518274.1| conserved hypothetical protein [Ricinus communis]
           gi|223542494|gb|EEF44034.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 431

 Score = 98.6 bits (244), Expect = 8e-19
 Identities = 47/50 (94%), Positives = 48/50 (96%)
 Frame = +3

Query: 3   RCIEEYLCTMFRFTDKEDRVGVGVYDVILLKYDPGRYMLTMGRKQEPLCK 152
           RCIEEYLCTMFRFTDKEDRV VGVY+VI LKYDPGRYMLTMGRKQEPLCK
Sbjct: 383 RCIEEYLCTMFRFTDKEDRVRVGVYNVI-LKYDPGRYMLTMGRKQEPLCK 431


>emb|CAN71465.1| hypothetical protein VITISV_038986 [Vitis vinifera]
          Length = 564

 Score = 57.0 bits (136), Expect(2) = 5e-10
 Identities = 24/29 (82%), Positives = 28/29 (96%)
 Frame = -3

Query: 309 RFPPTDRSTPITPRTVQDSYHLSYGFLTS 223
           + PPTDRSTPITPRTVQDSYHLSYG+L++
Sbjct: 300 KIPPTDRSTPITPRTVQDSYHLSYGWLSN 328



 Score = 32.3 bits (72), Expect(2) = 5e-10
 Identities = 27/78 (34%), Positives = 27/78 (34%)
 Frame = -2

Query: 235 LSNFTSFSGRSALLDRW*YKISFTPRHFLHNGSCFLPIVSMYLPGXXXXXXXXXXXXXXX 56
           LSNFTSFSGRSAL                                               
Sbjct: 326 LSNFTSFSGRSAL----------------------------------------------- 338

Query: 55  XXXSVNRNIVHRYSSMQR 2
               VNRNIVHRYSSMQR
Sbjct: 339 -SIDVNRNIVHRYSSMQR 355


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