BLASTX nr result
ID: Sinomenium22_contig00040261
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium22_contig00040261
(444 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006841194.1| hypothetical protein AMTR_s00334p00011530 [A... 120 1e-40
ref|XP_004162281.1| PREDICTED: LOW QUALITY PROTEIN: cytochrome b... 129 4e-28
ref|XP_004228904.1| PREDICTED: LOW QUALITY PROTEIN: cytochrome b... 122 4e-26
pir||T14570 cytochrome b559 component psbE - beet chloroplast gi... 122 7e-26
ref|YP_008757458.1| cytochrome b559 subunit alpha (chloroplast) ... 120 3e-25
ref|XP_006404486.1| hypothetical protein EUTSA_v10011089mg, part... 110 3e-22
gb|AER45593.1| psbE (chloroplast) [Halocarpus kirkii] 103 2e-20
gb|EYU45044.1| hypothetical protein MIMGU_mgv1a022247mg [Mimulus... 101 9e-20
ref|YP_006665797.1| photosystem II cytochrome b559 alpha subunit... 100 2e-19
gb|AAM53426.1| PsbE [Cuscuta gronovii] 100 2e-19
ref|YP_008993193.1| photosystem II cytochrome b559 alpha subunit... 100 2e-19
gb|AHA12699.1| photosystem II cytochrome b559 alpha subunit [Orc... 100 2e-19
gb|AGQ55692.1| photosystem II protein V (chloroplast) [Alstroeme... 100 2e-19
gb|AGW04683.1| photosystem II protein V [Matelea biflora] 100 2e-19
gb|EPS73280.1| cytochrome b559 subunit alpha, partial [Genlisea ... 100 2e-19
ref|YP_008378800.1| photosystem II protein V (chloroplast) [Naja... 100 2e-19
ref|XP_004987318.1| PREDICTED: cytochrome b559 subunit alpha-lik... 100 2e-19
ref|YP_007475978.1| photosystem II cytochrome b559 alpha subunit... 100 2e-19
gb|AGC38262.1| photosystem II protein V (chloroplast) [Cryptochl... 100 2e-19
ref|YP_358595.1| photosystem II protein V [Phalaenopsis aphrodit... 100 2e-19
>ref|XP_006841194.1| hypothetical protein AMTR_s00334p00011530 [Amborella trichopoda]
gi|548843101|gb|ERN02869.1| hypothetical protein
AMTR_s00334p00011530 [Amborella trichopoda]
Length = 162
Score = 120 bits (302), Expect(2) = 1e-40
Identities = 58/60 (96%), Positives = 58/60 (96%)
Frame = +3
Query: 264 PPLTVQEYVELSMSGSTGERSFADIITSIRYWVIHSITIPSLFIAGWLFVSTGLAYDVFG 443
PPLTVQEY EL MSGSTGERSFADIITSIRYWVIHSITIPSLFIAGWLFVSTGLAYDVFG
Sbjct: 68 PPLTVQEYAELKMSGSTGERSFADIITSIRYWVIHSITIPSLFIAGWLFVSTGLAYDVFG 127
Score = 71.6 bits (174), Expect(2) = 1e-40
Identities = 37/54 (68%), Positives = 42/54 (77%)
Frame = +2
Query: 104 EIALLCQKKDSYTESVYSKNTLGTLLTISQKKMKFQ*NLSGFPLTDFIFDGIDP 265
EI+LLCQKKDSYT+SVYSK TLGTLLTISQ+ + S F TDFIF G+DP
Sbjct: 20 EISLLCQKKDSYTDSVYSKETLGTLLTISQRS-----DFSEFLFTDFIFYGVDP 68
>ref|XP_004162281.1| PREDICTED: LOW QUALITY PROTEIN: cytochrome b559 subunit alpha-like
[Cucumis sativus]
Length = 132
Score = 129 bits (324), Expect = 4e-28
Identities = 68/76 (89%), Positives = 68/76 (89%)
Frame = +3
Query: 216 ISVGFH*LISSLMESIPPLTVQEYVELSMSGSTGERSFADIITSIRYWVIHSITIPSLFI 395
ISV FH LISS ESIP LTVQEYVEL MSGSTGERSFADIITSIRYWVIHS IPSLFI
Sbjct: 23 ISVNFHLLISSFTESIPLLTVQEYVELGMSGSTGERSFADIITSIRYWVIHS-XIPSLFI 81
Query: 396 AGWLFVSTGLAYDVFG 443
AGWLFVSTGLAYDVFG
Sbjct: 82 AGWLFVSTGLAYDVFG 97
>ref|XP_004228904.1| PREDICTED: LOW QUALITY PROTEIN: cytochrome b559 subunit alpha-like
[Solanum lycopersicum]
Length = 116
Score = 122 bits (307), Expect = 4e-26
Identities = 64/75 (85%), Positives = 66/75 (88%)
Frame = +3
Query: 219 SVGFH*LISSLMESIPPLTVQEYVELSMSGSTGERSFADIITSIRYWVIHSITIPSLFIA 398
++ H LISS E LTVQEYVELSMSGSTGERSFADIITSIRYWVIHSITIPSLFIA
Sbjct: 8 TINCHLLISSFTER-SSLTVQEYVELSMSGSTGERSFADIITSIRYWVIHSITIPSLFIA 66
Query: 399 GWLFVSTGLAYDVFG 443
GWLFVSTGLAYDVFG
Sbjct: 67 GWLFVSTGLAYDVFG 81
>pir||T14570 cytochrome b559 component psbE - beet chloroplast
gi|860891|emb|CAA60967.1| PSII cytochome b559 alpha
chain [Beta vulgaris subsp. vulgaris]
gi|860897|emb|CAA60972.1| PSII cytochrome b599 alpha
chain [Beta vulgaris subsp. vulgaris]
Length = 118
Score = 122 bits (305), Expect = 7e-26
Identities = 63/69 (91%), Positives = 64/69 (92%)
Frame = +3
Query: 237 LISSLMESIPPLTVQEYVELSMSGSTGERSFADIITSIRYWVIHSITIPSLFIAGWLFVS 416
LISS + PLTVQEYVELSMSGSTGERSFADIITSIRYWVIHSITIPSLFIAGWLFVS
Sbjct: 17 LISSFTDL--PLTVQEYVELSMSGSTGERSFADIITSIRYWVIHSITIPSLFIAGWLFVS 74
Query: 417 TGLAYDVFG 443
TGLAYDVFG
Sbjct: 75 TGLAYDVFG 83
>ref|YP_008757458.1| cytochrome b559 subunit alpha (chloroplast) [Oryza rufipogon]
gi|42795499|gb|AAS46066.1| cytochrome b559 alpha chain
[Oryza sativa Indica Group] gi|42795566|gb|AAS46132.1|
cytochrome b559 alpha chain [Oryza sativa Japonica
Group] gi|42795630|gb|AAS46195.1| cytochrome b559 alpha
chain [Oryza sativa Japonica Group]
gi|290790587|gb|ADD62847.1| photosystem II cytochrome
b559 alpha subunit [Oryza sativa Japonica Group]
gi|290790656|gb|ADD62915.1| photosystem II cytochrome
b559 alpha subunit [Oryza meridionalis]
gi|290790725|gb|ADD62983.1| photosystem II cytochrome
b559 alpha subunit [Oryza australiensis]
gi|290790794|gb|ADD63051.1| photosystem II cytochrome
b559 alpha subunit [Potamophila parviflora]
gi|290790861|gb|ADD63117.1| photosystem II cytochrome
b559 alpha subunit [Microlaena stipoides]
gi|552954496|gb|AGY48964.1| cytochrome b559 subunit
alpha (chloroplast) [Oryza rufipogon]
Length = 104
Score = 120 bits (300), Expect = 3e-25
Identities = 60/69 (86%), Positives = 63/69 (91%)
Frame = +3
Query: 237 LISSLMESIPPLTVQEYVELSMSGSTGERSFADIITSIRYWVIHSITIPSLFIAGWLFVS 416
+I S ESIP L VQ++ ELSMSGSTGERSFADIITSIRYWVIHSITIPSLFIAGWLFVS
Sbjct: 1 MIPSFTESIPFLNVQKFGELSMSGSTGERSFADIITSIRYWVIHSITIPSLFIAGWLFVS 60
Query: 417 TGLAYDVFG 443
TGLAYDVFG
Sbjct: 61 TGLAYDVFG 69
>ref|XP_006404486.1| hypothetical protein EUTSA_v10011089mg, partial [Eutrema
salsugineum] gi|557105605|gb|ESQ45939.1| hypothetical
protein EUTSA_v10011089mg, partial [Eutrema salsugineum]
Length = 94
Score = 110 bits (274), Expect = 3e-22
Identities = 52/57 (91%), Positives = 56/57 (98%)
Frame = +3
Query: 273 TVQEYVELSMSGSTGERSFADIITSIRYWVIHSITIPSLFIAGWLFVSTGLAYDVFG 443
+++EY+E SMSGSTGERSFADIITSIRYWVIHSITIPSLFIAGWLFVSTGLAYDVFG
Sbjct: 3 SLREYLEFSMSGSTGERSFADIITSIRYWVIHSITIPSLFIAGWLFVSTGLAYDVFG 59
>gb|AER45593.1| psbE (chloroplast) [Halocarpus kirkii]
Length = 87
Score = 103 bits (257), Expect = 2e-20
Identities = 49/52 (94%), Positives = 52/52 (100%)
Frame = +3
Query: 288 VELSMSGSTGERSFADIITSIRYWVIHSITIPSLFIAGWLFVSTGLAYDVFG 443
+ELSMSG+TGER+FADIITSIRYWVIHSITIPSLFIAGWLFVSTGLAYDVFG
Sbjct: 1 MELSMSGNTGERAFADIITSIRYWVIHSITIPSLFIAGWLFVSTGLAYDVFG 52
>gb|EYU45044.1| hypothetical protein MIMGU_mgv1a022247mg [Mimulus guttatus]
Length = 85
Score = 101 bits (252), Expect = 9e-20
Identities = 49/51 (96%), Positives = 50/51 (98%)
Frame = +3
Query: 288 VELSMSGSTGERSFADIITSIRYWVIHSITIPSLFIAGWLFVSTGLAYDVF 440
+ELSMSGSTGERSFADIITSIRYWVIH ITIPSLFIAGWLFVSTGLAYDVF
Sbjct: 1 MELSMSGSTGERSFADIITSIRYWVIHRITIPSLFIAGWLFVSTGLAYDVF 51
>ref|YP_006665797.1| photosystem II cytochrome b559 alpha subunit (chloroplast) [Elodea
canadensis] gi|456061468|ref|YP_007475636.1| photosystem
II cytochrome b559 alpha subunit [Heliconia collinsiana]
gi|511943388|ref|YP_008081667.1| cytochrome b559 alpha
chain (chloroplast) [Cymbidium sinense]
gi|511943501|ref|YP_008081823.1| cytochrome b559 alpha
chain (chloroplast) [Cymbidium tracyanum]
gi|512721449|ref|YP_008081745.1| cytochrome b559 alpha
chain (chloroplast) [Cymbidium tortisepalum]
gi|556927249|ref|YP_008758205.1| cytochrome b559 alpha
chain (chloroplast) [Veratrum patulum]
gi|563940569|ref|YP_008854442.1| photosystem II
cytochrome b559 alpha subunit [Musa textilis]
gi|563940671|ref|YP_008854527.1| photosystem II
cytochrome b559 alpha subunit [Ravenala
madagascariensis] gi|618750318|ref|YP_009026454.1|
photosystem II protein V (chloroplast) [Dendrobium
officinale] gi|548610|sp|P36442.2|PSBE_MESCR RecName:
Full=Cytochrome b559 subunit alpha; AltName: Full=PSII
reaction center subunit V gi|437300|gb|AAA21857.1|
cytochrome b-559 alpha subunit [Mesembryanthemum
crystallinum] gi|156598315|gb|ABU85418.1| photosystem II
cytochrome b559 alpha subunit [Musa acuminata]
gi|374094613|gb|AEY84669.1| photosystem II cytochrome
b559 alpha subunit (chloroplast) [Elodea canadensis]
gi|374974833|gb|AFA27508.1| photosystem II cytochrome
b559 alpha subunit, partial [Flagellaria indica]
gi|374974849|gb|AFA27516.1| photosystem II cytochrome
b559 alpha subunit, partial [Kingia australis]
gi|374974887|gb|AFA27535.1| photosystem II cytochrome
b559 alpha subunit, partial [Thurnia sphaerocephala]
gi|392841355|gb|AFM83310.1| photosystem II cytochrome
b559 alpha subunit (chloroplast) [Kingia australis]
gi|408903948|gb|AFU96558.1| PsbE, partial (chloroplast)
[Chrysobalanus icaco] gi|408903958|gb|AFU96563.1| PsbE,
partial (chloroplast) [Euphorbia maculata]
gi|408903978|gb|AFU96573.1| PsbE, partial (chloroplast)
[Linum usitatissimum] gi|449326115|gb|AGE92701.1|
photosystem II cytochrome b559 alpha subunit [Heliconia
collinsiana] gi|449326896|gb|AGE93473.1| photosystem II
cytochrome b559 alpha subunit [Xiphidium caeruleum]
gi|482662138|gb|AGK25366.1| cytochrome b559 alpha chain
(chloroplast) [Cymbidium sinense]
gi|482662217|gb|AGK25444.1| cytochrome b559 alpha chain
(chloroplast) [Cymbidium tortisepalum]
gi|482662296|gb|AGK25522.1| cytochrome b559 alpha chain
(chloroplast) [Cymbidium tortisepalum]
gi|482662454|gb|AGK25678.1| cytochrome b559 alpha chain
(chloroplast) [Cymbidium tracyanum]
gi|482662533|gb|AGK25756.1| cytochrome b559 alpha chain
(chloroplast) [Cymbidium tortisepalum]
gi|507474336|gb|AGM48212.1| photosystem II protein V
(chloroplast) [Dendrobium officinale]
gi|525312474|emb|CCW72392.1| psbF (chloroplast) [Musa
acuminata subsp. malaccensis]
gi|549531734|gb|AGX28860.1| cytochrome b559 alpha chain
(chloroplast) [Veratrum patulum]
gi|557636929|gb|AHA12531.1| photosystem II cytochrome
b559 alpha subunit [Musa textilis]
gi|557637015|gb|AHA12616.1| photosystem II cytochrome
b559 alpha subunit [Ravenala madagascariensis]
gi|557637173|gb|AHA12772.1| photosystem II cytochrome
b559 alpha subunit [Canna indica]
gi|557637257|gb|AHA12855.1| photosystem II cytochrome
b559 alpha subunit [Maranta leuconeura]
gi|557637344|gb|AHA12941.1| photosystem II cytochrome
b559 alpha subunit [Monocostus uniflorus]
gi|557637431|gb|AHA13027.1| photosystem II cytochrome
b559 alpha subunit [Costus pulverulentus]
gi|557637605|gb|AHA13199.1| photosystem II cytochrome
b559 alpha subunit [Thaumatococcus daniellii]
Length = 83
Score = 100 bits (249), Expect = 2e-19
Identities = 48/48 (100%), Positives = 48/48 (100%)
Frame = +3
Query: 300 MSGSTGERSFADIITSIRYWVIHSITIPSLFIAGWLFVSTGLAYDVFG 443
MSGSTGERSFADIITSIRYWVIHSITIPSLFIAGWLFVSTGLAYDVFG
Sbjct: 1 MSGSTGERSFADIITSIRYWVIHSITIPSLFIAGWLFVSTGLAYDVFG 48
>gb|AAM53426.1| PsbE [Cuscuta gronovii]
Length = 84
Score = 100 bits (249), Expect = 2e-19
Identities = 48/48 (100%), Positives = 48/48 (100%)
Frame = +3
Query: 300 MSGSTGERSFADIITSIRYWVIHSITIPSLFIAGWLFVSTGLAYDVFG 443
MSGSTGERSFADIITSIRYWVIHSITIPSLFIAGWLFVSTGLAYDVFG
Sbjct: 1 MSGSTGERSFADIITSIRYWVIHSITIPSLFIAGWLFVSTGLAYDVFG 48
>ref|YP_008993193.1| photosystem II cytochrome b559 alpha subunit (chloroplast)
[Magnolia cathcartii]
Length = 83
Score = 100 bits (249), Expect = 2e-19
Identities = 48/48 (100%), Positives = 48/48 (100%)
Frame = +3
Query: 300 MSGSTGERSFADIITSIRYWVIHSITIPSLFIAGWLFVSTGLAYDVFG 443
MSGSTGERSFADIITSIRYWVIHSITIPSLFIAGWLFVSTGLAYDVFG
Sbjct: 1 MSGSTGERSFADIITSIRYWVIHSITIPSLFIAGWLFVSTGLAYDVFG 48
>gb|AHA12699.1| photosystem II cytochrome b559 alpha subunit [Orchidantha
fimbriata]
Length = 83
Score = 100 bits (249), Expect = 2e-19
Identities = 48/48 (100%), Positives = 48/48 (100%)
Frame = +3
Query: 300 MSGSTGERSFADIITSIRYWVIHSITIPSLFIAGWLFVSTGLAYDVFG 443
MSGSTGERSFADIITSIRYWVIHSITIPSLFIAGWLFVSTGLAYDVFG
Sbjct: 1 MSGSTGERSFADIITSIRYWVIHSITIPSLFIAGWLFVSTGLAYDVFG 48
>gb|AGQ55692.1| photosystem II protein V (chloroplast) [Alstroemeria aurea]
Length = 83
Score = 100 bits (249), Expect = 2e-19
Identities = 48/48 (100%), Positives = 48/48 (100%)
Frame = +3
Query: 300 MSGSTGERSFADIITSIRYWVIHSITIPSLFIAGWLFVSTGLAYDVFG 443
MSGSTGERSFADIITSIRYWVIHSITIPSLFIAGWLFVSTGLAYDVFG
Sbjct: 1 MSGSTGERSFADIITSIRYWVIHSITIPSLFIAGWLFVSTGLAYDVFG 48
>gb|AGW04683.1| photosystem II protein V [Matelea biflora]
Length = 83
Score = 100 bits (249), Expect = 2e-19
Identities = 48/48 (100%), Positives = 48/48 (100%)
Frame = +3
Query: 300 MSGSTGERSFADIITSIRYWVIHSITIPSLFIAGWLFVSTGLAYDVFG 443
MSGSTGERSFADIITSIRYWVIHSITIPSLFIAGWLFVSTGLAYDVFG
Sbjct: 1 MSGSTGERSFADIITSIRYWVIHSITIPSLFIAGWLFVSTGLAYDVFG 48
>gb|EPS73280.1| cytochrome b559 subunit alpha, partial [Genlisea aurea]
Length = 95
Score = 100 bits (249), Expect = 2e-19
Identities = 48/48 (100%), Positives = 48/48 (100%)
Frame = +3
Query: 300 MSGSTGERSFADIITSIRYWVIHSITIPSLFIAGWLFVSTGLAYDVFG 443
MSGSTGERSFADIITSIRYWVIHSITIPSLFIAGWLFVSTGLAYDVFG
Sbjct: 1 MSGSTGERSFADIITSIRYWVIHSITIPSLFIAGWLFVSTGLAYDVFG 48
>ref|YP_008378800.1| photosystem II protein V (chloroplast) [Najas flexilis]
gi|427920131|gb|AFY64162.1| photosystem II protein V
(chloroplast) [Najas flexilis]
Length = 83
Score = 100 bits (249), Expect = 2e-19
Identities = 48/48 (100%), Positives = 48/48 (100%)
Frame = +3
Query: 300 MSGSTGERSFADIITSIRYWVIHSITIPSLFIAGWLFVSTGLAYDVFG 443
MSGSTGERSFADIITSIRYWVIHSITIPSLFIAGWLFVSTGLAYDVFG
Sbjct: 1 MSGSTGERSFADIITSIRYWVIHSITIPSLFIAGWLFVSTGLAYDVFG 48
>ref|XP_004987318.1| PREDICTED: cytochrome b559 subunit alpha-like [Setaria italica]
gi|514825361|ref|XP_004987334.1| PREDICTED: cytochrome
b559 subunit alpha-like [Setaria italica]
Length = 136
Score = 100 bits (249), Expect = 2e-19
Identities = 48/48 (100%), Positives = 48/48 (100%)
Frame = +3
Query: 300 MSGSTGERSFADIITSIRYWVIHSITIPSLFIAGWLFVSTGLAYDVFG 443
MSGSTGERSFADIITSIRYWVIHSITIPSLFIAGWLFVSTGLAYDVFG
Sbjct: 1 MSGSTGERSFADIITSIRYWVIHSITIPSLFIAGWLFVSTGLAYDVFG 48
>ref|YP_007475978.1| photosystem II cytochrome b559 alpha subunit [Bismarckia nobilis]
gi|449326461|gb|AGE93043.1| photosystem II cytochrome
b559 alpha subunit [Bismarckia nobilis]
Length = 83
Score = 100 bits (249), Expect = 2e-19
Identities = 48/48 (100%), Positives = 48/48 (100%)
Frame = +3
Query: 300 MSGSTGERSFADIITSIRYWVIHSITIPSLFIAGWLFVSTGLAYDVFG 443
MSGSTGERSFADIITSIRYWVIHSITIPSLFIAGWLFVSTGLAYDVFG
Sbjct: 1 MSGSTGERSFADIITSIRYWVIHSITIPSLFIAGWLFVSTGLAYDVFG 48
>gb|AGC38262.1| photosystem II protein V (chloroplast) [Cryptochloa strictiflora]
Length = 87
Score = 100 bits (249), Expect = 2e-19
Identities = 48/48 (100%), Positives = 48/48 (100%)
Frame = +3
Query: 300 MSGSTGERSFADIITSIRYWVIHSITIPSLFIAGWLFVSTGLAYDVFG 443
MSGSTGERSFADIITSIRYWVIHSITIPSLFIAGWLFVSTGLAYDVFG
Sbjct: 1 MSGSTGERSFADIITSIRYWVIHSITIPSLFIAGWLFVSTGLAYDVFG 48
>ref|YP_358595.1| photosystem II protein V [Phalaenopsis aphrodite subsp. formosana]
gi|94730458|sp|Q3BAM3.1|PSBE_PHAAO RecName:
Full=Cytochrome b559 subunit alpha; AltName: Full=PSII
reaction center subunit V gi|58802797|gb|AAW82517.1|
cytochrome b559 alpha chain [Phalaenopsis aphrodite
subsp. formosana]
Length = 83
Score = 100 bits (249), Expect = 2e-19
Identities = 48/48 (100%), Positives = 48/48 (100%)
Frame = +3
Query: 300 MSGSTGERSFADIITSIRYWVIHSITIPSLFIAGWLFVSTGLAYDVFG 443
MSGSTGERSFADIITSIRYWVIHSITIPSLFIAGWLFVSTGLAYDVFG
Sbjct: 1 MSGSTGERSFADIITSIRYWVIHSITIPSLFIAGWLFVSTGLAYDVFG 48