BLASTX nr result

ID: Sinomenium22_contig00040251 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium22_contig00040251
         (266 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004246507.1| PREDICTED: ABC transporter B family member 2...    59   7e-07
emb|CBI30307.3| unnamed protein product [Vitis vinifera]               59   7e-07
ref|XP_002276489.1| PREDICTED: ABC transporter B family member 2...    59   7e-07
ref|XP_006341102.1| PREDICTED: ABC transporter B family member 2...    58   2e-06

>ref|XP_004246507.1| PREDICTED: ABC transporter B family member 29, chloroplastic-like
           [Solanum lycopersicum]
          Length = 639

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 25/39 (64%), Positives = 32/39 (82%)
 Frame = -2

Query: 118 PIKPVVQSEWRQILSGWVCSLISVYSLSQIASKVGNFSA 2
           P+KP + SEW+ IL GW+CS+ISVYSLS+I  KVG FS+
Sbjct: 71  PLKPYLLSEWKSILCGWLCSVISVYSLSKIVPKVGKFSS 109


>emb|CBI30307.3| unnamed protein product [Vitis vinifera]
          Length = 723

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 33/74 (44%), Positives = 41/74 (55%), Gaps = 6/74 (8%)
 Frame = -2

Query: 205 TSSFLLTP*IEIRTSFDL------ITFPPFLPFLHPIKPVVQSEWRQILSGWVCSLISVY 44
           T  F  +P + ++ SF           P     L  IKP V SE++ IL GW CSL+SVY
Sbjct: 121 TKLFAFSPNLTVKPSFKASLKPFNFISPSTFHSLEAIKPYVLSEYKPILKGWFCSLVSVY 180

Query: 43  SLSQIASKVGNFSA 2
           SLS+I  KVG FSA
Sbjct: 181 SLSKIVPKVGKFSA 194


>ref|XP_002276489.1| PREDICTED: ABC transporter B family member 29, chloroplastic [Vitis
           vinifera]
          Length = 630

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 33/74 (44%), Positives = 41/74 (55%), Gaps = 6/74 (8%)
 Frame = -2

Query: 205 TSSFLLTP*IEIRTSFDL------ITFPPFLPFLHPIKPVVQSEWRQILSGWVCSLISVY 44
           T  F  +P + ++ SF           P     L  IKP V SE++ IL GW CSL+SVY
Sbjct: 27  TKLFAFSPNLTVKPSFKASLKPFNFISPSTFHSLEAIKPYVLSEYKPILKGWFCSLVSVY 86

Query: 43  SLSQIASKVGNFSA 2
           SLS+I  KVG FSA
Sbjct: 87  SLSKIVPKVGKFSA 100


>ref|XP_006341102.1| PREDICTED: ABC transporter B family member 29, chloroplastic-like
           [Solanum tuberosum]
          Length = 639

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 24/39 (61%), Positives = 32/39 (82%)
 Frame = -2

Query: 118 PIKPVVQSEWRQILSGWVCSLISVYSLSQIASKVGNFSA 2
           P+KP + SEW+ IL GW+CS++SVYSLS+I  KVG FS+
Sbjct: 71  PLKPYLLSEWKPILCGWLCSVLSVYSLSKIVPKVGKFSS 109


Top