BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium22_contig00040190
         (758 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004305832.1| PREDICTED: pentatricopeptide repeat-containi...   355   1e-95
ref|XP_002279693.1| PREDICTED: pentatricopeptide repeat-containi...   355   1e-95
ref|XP_002306741.1| pentatricopeptide repeat-containing family p...   352   8e-95
ref|XP_002534070.1| pentatricopeptide repeat-containing protein,...   347   2e-93
ref|XP_006437177.1| hypothetical protein CICLE_v10031197mg [Citr...   345   1e-92
gb|EXB44509.1| hypothetical protein L484_000760 [Morus notabilis...   344   2e-92
ref|XP_006484869.1| PREDICTED: pentatricopeptide repeat-containi...   343   4e-92
ref|XP_007048864.1| Pentatricopeptide repeat (PPR-like) superfam...   339   7e-91
ref|XP_006356395.1| PREDICTED: pentatricopeptide repeat-containi...   335   8e-90
ref|XP_004250888.1| PREDICTED: pentatricopeptide repeat-containi...   331   2e-88
ref|XP_007141857.1| hypothetical protein PHAVU_008G231600g [Phas...   321   2e-85
ref|XP_003545143.1| PREDICTED: pentatricopeptide repeat-containi...   321   2e-85
ref|XP_004151347.1| PREDICTED: pentatricopeptide repeat-containi...   320   4e-85
ref|XP_004491336.1| PREDICTED: pentatricopeptide repeat-containi...   313   5e-83
gb|EYU29595.1| hypothetical protein MIMGU_mgv1a025435mg [Mimulus...   311   2e-82
ref|XP_003617444.1| Pentatricopeptide repeat-containing protein ...   302   1e-79
ref|XP_006411565.1| hypothetical protein EUTSA_v10017572mg [Eutr...   298   1e-78
ref|NP_181820.1| pentatricopeptide repeat-containing protein [Ar...   296   4e-78
ref|XP_002880012.1| pentatricopeptide repeat-containing protein ...   294   3e-77
ref|XP_006293939.1| hypothetical protein CARUB_v10022931mg [Caps...   289   8e-76

>ref|XP_004305832.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
           chloroplastic-like [Fragaria vesca subsp. vesca]
          Length = 550

 Score =  355 bits (911), Expect = 1e-95
 Identities = 171/252 (67%), Positives = 207/252 (82%)
 Frame = +1

Query: 1   VRNTIIFMYANCGFLSEASRLFDEDSDFDVVAWNSMIMGLAKSGQVDDSRRLFDKMESKS 180
           VRNTII MY+NCG LSEA R+FDED +FD+VAWNSMIMGL+K G+V +SRRLFDKM  ++
Sbjct: 158 VRNTIIHMYSNCGLLSEARRVFDEDLEFDIVAWNSMIMGLSKCGEVGESRRLFDKMPQRN 217

Query: 181 TITWNSMISGYVRNGRAKEAFDLFFQMQNQKIHPTEFTMASLLTTCGRLGALEQGEWIHA 360
           +I+WNSMI G VRNG   EA DLF +MQ QKI P+EFTM SLL    +LGA+ QGEWIH 
Sbjct: 218 SISWNSMIGGSVRNGMYTEALDLFGEMQKQKIKPSEFTMVSLLNASAQLGAIRQGEWIHE 277

Query: 361 YIRKSKIEVNSIVLTAMVDMYSKCGSVNKALQVFVEAPKKGLSTWNSMIIGLAINGRGEE 540
           YIRK+ I++N IV+TA+++MYSKCGS+ KA+ VF  AP+ GLS WNS+I+GLA NG  EE
Sbjct: 278 YIRKNHIQLNPIVVTAIINMYSKCGSIEKAVHVFEAAPRTGLSCWNSIIMGLATNGCEEE 337

Query: 541 AIEMFSRLQSSGLEPDDVSFIGVLTACNHCGMVKEARKYFSLMNKTCNFKPTIKHYSCMV 720
           AIE+FSRL+SS   PDDVSF+GVLTAC+H GMV++ARKYFS+M +T    P+IKHYSCMV
Sbjct: 338 AIELFSRLKSSSFVPDDVSFLGVLTACSHSGMVEKARKYFSVMRETYRIAPSIKHYSCMV 397

Query: 721 DVLGRAGFLEEA 756
           DVLGRAG LEEA
Sbjct: 398 DVLGRAGLLEEA 409



 Score = 80.5 bits (197), Expect = 6e-13
 Identities = 55/258 (21%), Positives = 111/258 (43%), Gaps = 34/258 (13%)
 Frame = +1

Query: 85  DVVAWNSMIMGLAK-SGQVDDSRRLFDKMESKSTITWNSMISGYVRNGRAKEAFDLFFQM 261
           D VA + ++   A  +G ++ +  +F  + + +   WN++I G+  +   + A  LF  M
Sbjct: 52  DTVAASRVLAFCASPAGDINYAYMVFRHIHNPNLFIWNTIIRGFSNSSNPEAAISLFIDM 111

Query: 262 Q-NQKIHPTEFTMASLLTTCGRLGALEQGEWIHAYIRKSKIEVNSIVLTAMVDMYSKCGS 438
                + P   T  S+     +LG    G  +H  + K  +E +  V   ++ MYS CG 
Sbjct: 112 LVTSTVQPQRLTYPSVFKAYAQLGLAHDGAQLHGRVVKLGLESDQFVRNTIIHMYSNCGL 171

Query: 439 VNKALQVFVEAPKKGLSTWNSMIIGLA-------------------------------IN 525
           +++A +VF E  +  +  WNSMI+GL+                                N
Sbjct: 172 LSEARRVFDEDLEFDIVAWNSMIMGLSKCGEVGESRRLFDKMPQRNSISWNSMIGGSVRN 231

Query: 526 GRGEEAIEMFSRLQSSGLEPDDVSFIGVLTACNHCGMVKEARKYFSLMNKT-CNFKPTIK 702
           G   EA+++F  +Q   ++P + + + +L A    G +++       + K      P + 
Sbjct: 232 GMYTEALDLFGEMQKQKIKPSEFTMVSLLNASAQLGAIRQGEWIHEYIRKNHIQLNPIV- 290

Query: 703 HYSCMVDVLGRAGFLEEA 756
             + ++++  + G +E+A
Sbjct: 291 -VTAIINMYSKCGSIEKA 307


>ref|XP_002279693.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
           chloroplastic [Vitis vinifera]
           gi|302143555|emb|CBI22116.3| unnamed protein product
           [Vitis vinifera]
          Length = 533

 Score =  355 bits (910), Expect = 1e-95
 Identities = 167/252 (66%), Positives = 208/252 (82%)
 Frame = +1

Query: 1   VRNTIIFMYANCGFLSEASRLFDEDSDFDVVAWNSMIMGLAKSGQVDDSRRLFDKMESKS 180
           +RNTII+MYANCGFLSE  + F E  DFD+VAWNSMIMGLAK G+VD+SR+LFD+M  ++
Sbjct: 162 IRNTIIYMYANCGFLSEMWKAFYERMDFDIVAWNSMIMGLAKCGEVDESRKLFDEMPLRN 221

Query: 181 TITWNSMISGYVRNGRAKEAFDLFFQMQNQKIHPTEFTMASLLTTCGRLGALEQGEWIHA 360
           T++WNSMISGYVRNGR +EA DLF QMQ ++I P+EFTM SLL    RLGAL+QGEWIH 
Sbjct: 222 TVSWNSMISGYVRNGRLREALDLFGQMQEERIKPSEFTMVSLLNASARLGALKQGEWIHD 281

Query: 361 YIRKSKIEVNSIVLTAMVDMYSKCGSVNKALQVFVEAPKKGLSTWNSMIIGLAINGRGEE 540
           YIRK+  E+N IV  +++DMY KCGS+ +A QVF  AP KGLS+WN+MI+GLA+NG   E
Sbjct: 282 YIRKNNFELNVIVTASIIDMYCKCGSIGEAFQVFEMAPLKGLSSWNTMILGLAMNGCENE 341

Query: 541 AIEMFSRLQSSGLEPDDVSFIGVLTACNHCGMVKEARKYFSLMNKTCNFKPTIKHYSCMV 720
           AI++FSRL+ S L PDDV+F+GVLTACN+ G+V +A++YFSLM+KT   +P+IKHYSCMV
Sbjct: 342 AIQLFSRLECSNLRPDDVTFVGVLTACNYSGLVDKAKEYFSLMSKTYKIEPSIKHYSCMV 401

Query: 721 DVLGRAGFLEEA 756
           D LGRAG LEEA
Sbjct: 402 DTLGRAGLLEEA 413



 Score = 82.0 bits (201), Expect = 2e-13
 Identities = 52/241 (21%), Positives = 105/241 (43%), Gaps = 32/241 (13%)
 Frame = +1

Query: 130 GQVDDSRRLFDKMESKSTITWNSMISGYVRNGRAKEAFDLFFQMQN-QKIHPTEFTMASL 306
           G ++ +  +F ++ S +  +WN++I G+ ++     A  LF  M     + P   T  S+
Sbjct: 72  GDINYAYLVFTQIHSPNLFSWNTIIRGFSQSSTPHHAISLFIDMLIVSSVQPHRLTYPSV 131

Query: 307 LTTCGRLGALEQGEWIHAYIRKSKIEVNSIVLTAMVDMYSKCGSVNKALQVFVEAPKKGL 486
                +LG    G  +H  + K  ++ +  +   ++ MY+ CG +++  + F E     +
Sbjct: 132 FKAYAQLGLAHYGAQLHGRVIKLGLQFDPFIRNTIIYMYANCGFLSEMWKAFYERMDFDI 191

Query: 487 STWNSMIIGLA-------------------------------INGRGEEAIEMFSRLQSS 573
             WNSMI+GLA                                NGR  EA+++F ++Q  
Sbjct: 192 VAWNSMIMGLAKCGEVDESRKLFDEMPLRNTVSWNSMISGYVRNGRLREALDLFGQMQEE 251

Query: 574 GLEPDDVSFIGVLTACNHCGMVKEARKYFSLMNKTCNFKPTIKHYSCMVDVLGRAGFLEE 753
            ++P + + + +L A    G +K+       + K  NF+  +   + ++D+  + G + E
Sbjct: 252 RIKPSEFTMVSLLNASARLGALKQGEWIHDYIRKN-NFELNVIVTASIIDMYCKCGSIGE 310

Query: 754 A 756
           A
Sbjct: 311 A 311


>ref|XP_002306741.1| pentatricopeptide repeat-containing family protein [Populus
           trichocarpa] gi|222856190|gb|EEE93737.1|
           pentatricopeptide repeat-containing family protein
           [Populus trichocarpa]
          Length = 509

 Score =  352 bits (903), Expect = 8e-95
 Identities = 167/252 (66%), Positives = 205/252 (81%)
 Frame = +1

Query: 1   VRNTIIFMYANCGFLSEASRLFDEDSDFDVVAWNSMIMGLAKSGQVDDSRRLFDKMESKS 180
           ++NTI+ MY NCGFL EA R+FD  + FDVV WN+MI+GLAK G++D SRRLFDKM  ++
Sbjct: 134 IQNTILNMYVNCGFLGEAQRIFDGATGFDVVTWNTMIIGLAKCGEIDKSRRLFDKMLLRN 193

Query: 181 TITWNSMISGYVRNGRAKEAFDLFFQMQNQKIHPTEFTMASLLTTCGRLGALEQGEWIHA 360
           T++WNSMISGYVR GR  EA +LF +MQ + I P+EFTM SLL  C  LGAL QGEWIH 
Sbjct: 194 TVSWNSMISGYVRKGRFFEAMELFSRMQEEGIKPSEFTMVSLLNACACLGALRQGEWIHD 253

Query: 361 YIRKSKIEVNSIVLTAMVDMYSKCGSVNKALQVFVEAPKKGLSTWNSMIIGLAINGRGEE 540
           YI K+   +NSIV+TA++DMYSKCGS++KALQVF  APKKGLS WNS+I+GLA++GRG E
Sbjct: 254 YIVKNNFALNSIVITAIIDMYSKCGSIDKALQVFKSAPKKGLSCWNSLILGLAMSGRGNE 313

Query: 541 AIEMFSRLQSSGLEPDDVSFIGVLTACNHCGMVKEARKYFSLMNKTCNFKPTIKHYSCMV 720
           A+ +FS+L+SS L+PD VSFIGVLTACNH GMV  A+ YF LM++T   +P+IKHYSCMV
Sbjct: 314 AVRLFSKLESSNLKPDHVSFIGVLTACNHAGMVDRAKDYFLLMSETYKIEPSIKHYSCMV 373

Query: 721 DVLGRAGFLEEA 756
           DVLGRAG LEEA
Sbjct: 374 DVLGRAGLLEEA 385



 Score = 88.6 bits (218), Expect = 2e-15
 Identities = 56/243 (23%), Positives = 109/243 (44%), Gaps = 33/243 (13%)
 Frame = +1

Query: 127 SGQVDDSRRLFDKMESKSTITWNSMISGYVRNGRAKEAFDLFFQMQ--NQKIHPTEFTMA 300
           +G ++ +  +F ++ + +   WN++I G+ ++     A  LF  M   +    P   T  
Sbjct: 42  AGDINYAYLVFTQIRNPNLFVWNTIIRGFSQSSTPHNAISLFIDMMFTSPTTQPQRLTYP 101

Query: 301 SLLTTCGRLGALEQGEWIHAYIRKSKIEVNSIVLTAMVDMYSKCGSVNKALQVFVEAPKK 480
           S+     +LG   +G  +H  + K  +E +  +   +++MY  CG + +A ++F  A   
Sbjct: 102 SVFKAYAQLGLAHEGAQLHGRVIKLGLENDQFIQNTILNMYVNCGFLGEAQRIFDGATGF 161

Query: 481 GLSTWNSMIIGLA-------------------------------INGRGEEAIEMFSRLQ 567
            + TWN+MIIGLA                                 GR  EA+E+FSR+Q
Sbjct: 162 DVVTWNTMIIGLAKCGEIDKSRRLFDKMLLRNTVSWNSMISGYVRKGRFFEAMELFSRMQ 221

Query: 568 SSGLEPDDVSFIGVLTACNHCGMVKEARKYFSLMNKTCNFKPTIKHYSCMVDVLGRAGFL 747
             G++P + + + +L AC   G +++       + K  NF       + ++D+  + G +
Sbjct: 222 EEGIKPSEFTMVSLLNACACLGALRQGEWIHDYIVKN-NFALNSIVITAIIDMYSKCGSI 280

Query: 748 EEA 756
           ++A
Sbjct: 281 DKA 283


>ref|XP_002534070.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223525897|gb|EEF28314.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 533

 Score =  347 bits (891), Expect = 2e-93
 Identities = 164/252 (65%), Positives = 203/252 (80%)
 Frame = +1

Query: 1   VRNTIIFMYANCGFLSEASRLFDEDSDFDVVAWNSMIMGLAKSGQVDDSRRLFDKMESKS 180
           +RNTI+FMY NCGF SEA ++FD   DFD+VAWN+MIMG+AK G VD+SRRLFDKM  ++
Sbjct: 159 IRNTILFMYVNCGFTSEARKVFDRGMDFDIVAWNTMIMGVAKCGLVDESRRLFDKMSLRN 218

Query: 181 TITWNSMISGYVRNGRAKEAFDLFFQMQNQKIHPTEFTMASLLTTCGRLGALEQGEWIHA 360
            ++WNSMISGYVRNGR  +A +LF +MQ ++I P+EFTM SLL  C  LGA+ QGEWIH 
Sbjct: 219 AVSWNSMISGYVRNGRFFDALELFQKMQVERIEPSEFTMVSLLNACACLGAIRQGEWIHD 278

Query: 361 YIRKSKIEVNSIVLTAMVDMYSKCGSVNKALQVFVEAPKKGLSTWNSMIIGLAINGRGEE 540
           Y+ K K E+N IV+TA++DMYSKCGS++KA+QVF  AP++GLS WNSMI+GLA+NG+  E
Sbjct: 279 YMVKKKFELNPIVVTAIIDMYSKCGSIDKAVQVFQSAPRRGLSCWNSMILGLAMNGQENE 338

Query: 541 AIEMFSRLQSSGLEPDDVSFIGVLTACNHCGMVKEARKYFSLMNKTCNFKPTIKHYSCMV 720
           A+++FS LQSS L PDDVSFI VLTAC+H GMV +A+ YF LM      KP IKH+SCMV
Sbjct: 339 ALQLFSVLQSSDLRPDDVSFIAVLTACDHTGMVDKAKDYFLLMRDKYKIKPGIKHFSCMV 398

Query: 721 DVLGRAGFLEEA 756
           DVLGRAG LEEA
Sbjct: 399 DVLGRAGLLEEA 410



 Score = 78.6 bits (192), Expect = 2e-12
 Identities = 50/243 (20%), Positives = 107/243 (44%), Gaps = 33/243 (13%)
 Frame = +1

Query: 127 SGQVDDSRRLFDKMESKSTITWNSMISGYVRNGRAKEAFDLFFQMQ-NQKIHPTEFTMAS 303
           +G ++ +  +F ++++ +   WN++I G+ R+   + +  L+  M     + P   T  S
Sbjct: 68  AGDINYAYLVFVQIQNPNIFAWNTIIRGFSRSSVPQNSISLYIDMLLTSPVQPQRLTYPS 127

Query: 304 LLTTCGRLGALEQGEWIHAYIRKSKIEVNSIVLTAMVDMYSKCGSVNKALQVFVEAPKKG 483
           +     +L    +G  +H  + K  +E +S +   ++ MY  CG  ++A +VF       
Sbjct: 128 VFKAFAQLDLASEGAQLHGKMIKLGLENDSFIRNTILFMYVNCGFTSEARKVFDRGMDFD 187

Query: 484 LSTWNSMIIGLA-------------------------------INGRGEEAIEMFSRLQS 570
           +  WN+MI+G+A                                NGR  +A+E+F ++Q 
Sbjct: 188 IVAWNTMIMGVAKCGLVDESRRLFDKMSLRNAVSWNSMISGYVRNGRFFDALELFQKMQV 247

Query: 571 SGLEPDDVSFIGVLTACNHCGMVKEARKYFSLM-NKTCNFKPTIKHYSCMVDVLGRAGFL 747
             +EP + + + +L AC   G +++       M  K     P +   + ++D+  + G +
Sbjct: 248 ERIEPSEFTMVSLLNACACLGAIRQGEWIHDYMVKKKFELNPIV--VTAIIDMYSKCGSI 305

Query: 748 EEA 756
           ++A
Sbjct: 306 DKA 308


>ref|XP_006437177.1| hypothetical protein CICLE_v10031197mg [Citrus clementina]
           gi|557539373|gb|ESR50417.1| hypothetical protein
           CICLE_v10031197mg [Citrus clementina]
          Length = 534

 Score =  345 bits (885), Expect = 1e-92
 Identities = 165/253 (65%), Positives = 204/253 (80%), Gaps = 1/253 (0%)
 Frame = +1

Query: 1   VRNTIIFMYANCGFLSEASRLFDE-DSDFDVVAWNSMIMGLAKSGQVDDSRRLFDKMESK 177
           + NTII+MYANCGFLSEA  +FDE D++FDVVAWNSMI+GLAK G++D+SRRLFDKM S+
Sbjct: 157 IHNTIIYMYANCGFLSEARLIFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSR 216

Query: 178 STITWNSMISGYVRNGRAKEAFDLFFQMQNQKIHPTEFTMASLLTTCGRLGALEQGEWIH 357
           +T++WNSMISGYVRN + KEA +LF +MQ Q I P+EFTM SLL  C +LGA+ QGEWIH
Sbjct: 217 NTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIH 276

Query: 358 AYIRKSKIEVNSIVLTAMVDMYSKCGSVNKALQVFVEAPKKGLSTWNSMIIGLAINGRGE 537
            ++  +  E+N+IV+TA++DMY KCG   +ALQVF   PKKGLS WNSM+ GLA+NG   
Sbjct: 277 NFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYEN 336

Query: 538 EAIEMFSRLQSSGLEPDDVSFIGVLTACNHCGMVKEARKYFSLMNKTCNFKPTIKHYSCM 717
           EAI++FS LQSS L+PD +SFI VLTACNH G V +A+ YF+LM +T   KP+IKHYSCM
Sbjct: 337 EAIKLFSGLQSSNLKPDYISFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCM 396

Query: 718 VDVLGRAGFLEEA 756
           VD LGRAG LEEA
Sbjct: 397 VDALGRAGLLEEA 409



 Score = 82.0 bits (201), Expect = 2e-13
 Identities = 54/243 (22%), Positives = 106/243 (43%), Gaps = 33/243 (13%)
 Frame = +1

Query: 127 SGQVDDSRRLFDKMESKSTITWNSMISGYVRNGRAKEAFDLFFQMQ-NQKIHPTEFTMAS 303
           +G ++ +  +F +++  +   WN++I G+ ++   + A  LF  M     I P   T  S
Sbjct: 66  AGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPS 125

Query: 304 LLTTCGRLGALEQGEWIHAYIRKSKIEVNSIVLTAMVDMYSKCGSVNKALQVFVEAPKK- 480
           L     +LG    G  +H  + K  +E +  +   ++ MY+ CG +++A  +F E   + 
Sbjct: 126 LFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLIFDEVDTEF 185

Query: 481 GLSTWNSMIIGLA-------------------------------INGRGEEAIEMFSRLQ 567
            +  WNSMIIGLA                                N + +EA+E+F  +Q
Sbjct: 186 DVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQ 245

Query: 568 SSGLEPDDVSFIGVLTACNHCGMVKEARKYFSLMNKTCNFKPTIKHYSCMVDVLGRAGFL 747
              ++P + + + +L AC   G +++     + +   C F+      + ++D+  + G  
Sbjct: 246 EQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNC-FELNTIVVTAIIDMYCKCGCP 304

Query: 748 EEA 756
           E A
Sbjct: 305 ERA 307


>gb|EXB44509.1| hypothetical protein L484_000760 [Morus notabilis]
           gi|587904202|gb|EXB92403.1| hypothetical protein
           L484_021387 [Morus notabilis]
          Length = 530

 Score =  344 bits (882), Expect = 2e-92
 Identities = 169/253 (66%), Positives = 204/253 (80%), Gaps = 1/253 (0%)
 Frame = +1

Query: 1   VRNTIIFMYANCGFLSEASRLFDEDSDFDVVAWNSMIMGLAKSGQVDDSRRLFDKMESKS 180
           VRNTII MY NCGFLSEA +LFDE S+ D+VAWNSMIMGL+K G+V +SRRLFD+M  ++
Sbjct: 163 VRNTIIHMYINCGFLSEARQLFDESSELDLVAWNSMIMGLSKCGEVGESRRLFDRMPLRN 222

Query: 181 TITWNSMISGYVRNGRAKEAFDLFFQMQNQKIHPTEFTMASLLTTCGRLGALEQGEWIHA 360
           +++WNSMISGYVRNG+  EA +LF +MQ + I  +EFTM SLL   GRLGA+ QGEWIH 
Sbjct: 223 SVSWNSMISGYVRNGKCVEALELFGKMQGEGIKASEFTMVSLLNASGRLGAIRQGEWIHE 282

Query: 361 YIRKSKIEVNSIVLTAMVDMYSKCGSVNKALQVFVEAPKKGLSTWNSMIIGLAINGRGEE 540
           YI K+ IE+N IV+TA++DMY KCGSVNKAL VF  APK GLS WNSM++GLA+NG  EE
Sbjct: 283 YITKNGIELNVIVVTAIIDMYCKCGSVNKALSVFKTAPKLGLSCWNSMVMGLAMNGCEEE 342

Query: 541 AIEMFSRLQSS-GLEPDDVSFIGVLTACNHCGMVKEARKYFSLMNKTCNFKPTIKHYSCM 717
           A+E+FSRL+SS  L PD VSF+ VLTACNH GMV +AR YFSLM    N +P+ +HYSCM
Sbjct: 343 ALELFSRLESSIDLRPDGVSFLAVLTACNHSGMVDKARDYFSLMRGKYNIEPSTRHYSCM 402

Query: 718 VDVLGRAGFLEEA 756
           VDVLG+AG LEEA
Sbjct: 403 VDVLGKAGHLEEA 415



 Score = 81.6 bits (200), Expect = 3e-13
 Identities = 51/242 (21%), Positives = 108/242 (44%), Gaps = 32/242 (13%)
 Frame = +1

Query: 127 SGQVDDSRRLFDKMESKSTITWNSMISGYVRNGRAKEAFDLFFQMQ-NQKIHPTEFTMAS 303
           +G ++ +  +F ++++ +   WN++I G+ R+   + A  LF  M     + P   T  S
Sbjct: 72  AGNINYALMVFSQIQNPNLFIWNTIIRGFSRSSTPQTAIFLFIDMLVGSPLEPQRLTYPS 131

Query: 304 LLTTCGRLGALEQGEWIHAYIRKSKIEVNSIVLTAMVDMYSKCGSVNKALQVFVEAPKKG 483
           +     +LG    G  +H  + K  ++ +  V   ++ MY  CG +++A Q+F E+ +  
Sbjct: 132 VFKAYAQLGLACFGAQLHGRVIKLGLDCDRFVRNTIIHMYINCGFLSEARQLFDESSELD 191

Query: 484 LSTWNSMIIGLA-------------------------------INGRGEEAIEMFSRLQS 570
           L  WNSMI+GL+                                NG+  EA+E+F ++Q 
Sbjct: 192 LVAWNSMIMGLSKCGEVGESRRLFDRMPLRNSVSWNSMISGYVRNGKCVEALELFGKMQG 251

Query: 571 SGLEPDDVSFIGVLTACNHCGMVKEARKYFSLMNKTCNFKPTIKHYSCMVDVLGRAGFLE 750
            G++  + + + +L A    G +++       + K    +  +   + ++D+  + G + 
Sbjct: 252 EGIKASEFTMVSLLNASGRLGAIRQGEWIHEYITKN-GIELNVIVVTAIIDMYCKCGSVN 310

Query: 751 EA 756
           +A
Sbjct: 311 KA 312


>ref|XP_006484869.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
           chloroplastic-like [Citrus sinensis]
          Length = 534

 Score =  343 bits (880), Expect = 4e-92
 Identities = 165/253 (65%), Positives = 202/253 (79%), Gaps = 1/253 (0%)
 Frame = +1

Query: 1   VRNTIIFMYANCGFLSEASRLFDE-DSDFDVVAWNSMIMGLAKSGQVDDSRRLFDKMESK 177
           + NTII+MYANCGFLSEA  +FDE D++FDVVAWNSMI+GLAK G++D+SRRLFDKM S+
Sbjct: 157 IHNTIIYMYANCGFLSEARLMFDEVDTEFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSR 216

Query: 178 STITWNSMISGYVRNGRAKEAFDLFFQMQNQKIHPTEFTMASLLTTCGRLGALEQGEWIH 357
           +T++WNSMISGYVRN + KEA +LF +MQ Q I P+EFTM SLL  C +LGA+ QGEWIH
Sbjct: 217 NTVSWNSMISGYVRNVKFKEALELFREMQEQNIKPSEFTMVSLLNACAKLGAIRQGEWIH 276

Query: 358 AYIRKSKIEVNSIVLTAMVDMYSKCGSVNKALQVFVEAPKKGLSTWNSMIIGLAINGRGE 537
            ++  +  E+N+IV+TA++DMY KCG   +ALQVF   PKKGLS WNSM+ GLA+NG   
Sbjct: 277 NFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVPKKGLSCWNSMVFGLAMNGYEN 336

Query: 538 EAIEMFSRLQSSGLEPDDVSFIGVLTACNHCGMVKEARKYFSLMNKTCNFKPTIKHYSCM 717
           EAI++FS LQSS L PD  SFI VLTACNH G V +A+ YF+LM +T   KP+IKHYSCM
Sbjct: 337 EAIKLFSGLQSSNLTPDYTSFIAVLTACNHSGKVNQAKDYFTLMTETYKIKPSIKHYSCM 396

Query: 718 VDVLGRAGFLEEA 756
           VD LGRAG LEEA
Sbjct: 397 VDALGRAGLLEEA 409



 Score = 81.3 bits (199), Expect = 3e-13
 Identities = 54/243 (22%), Positives = 106/243 (43%), Gaps = 33/243 (13%)
 Frame = +1

Query: 127 SGQVDDSRRLFDKMESKSTITWNSMISGYVRNGRAKEAFDLFFQMQ-NQKIHPTEFTMAS 303
           +G ++ +  +F +++  +   WN++I G+ ++   + A  LF  M     I P   T  S
Sbjct: 66  AGDINYAYLVFTQIKKPNLFIWNTIIRGFSQSSTPRNAILLFIDMLVTSPIQPQRLTYPS 125

Query: 304 LLTTCGRLGALEQGEWIHAYIRKSKIEVNSIVLTAMVDMYSKCGSVNKALQVFVEAPKK- 480
           L     +LG    G  +H  + K  +E +  +   ++ MY+ CG +++A  +F E   + 
Sbjct: 126 LFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDTEF 185

Query: 481 GLSTWNSMIIGLA-------------------------------INGRGEEAIEMFSRLQ 567
            +  WNSMIIGLA                                N + +EA+E+F  +Q
Sbjct: 186 DVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVRNVKFKEALELFREMQ 245

Query: 568 SSGLEPDDVSFIGVLTACNHCGMVKEARKYFSLMNKTCNFKPTIKHYSCMVDVLGRAGFL 747
              ++P + + + +L AC   G +++     + +   C F+      + ++D+  + G  
Sbjct: 246 EQNIKPSEFTMVSLLNACAKLGAIRQGEWIHNFLVTNC-FELNTIVVTAIIDMYCKCGCP 304

Query: 748 EEA 756
           E A
Sbjct: 305 ERA 307


>ref|XP_007048864.1| Pentatricopeptide repeat (PPR-like) superfamily protein [Theobroma
           cacao] gi|508701125|gb|EOX93021.1| Pentatricopeptide
           repeat (PPR-like) superfamily protein [Theobroma cacao]
          Length = 538

 Score =  339 bits (869), Expect = 7e-91
 Identities = 164/253 (64%), Positives = 201/253 (79%), Gaps = 1/253 (0%)
 Frame = +1

Query: 1   VRNTIIFMYANCGFLSEASRLFDEDS-DFDVVAWNSMIMGLAKSGQVDDSRRLFDKMESK 177
           +RNTII+MYANCG LSEA R+FDE+  + D+VAWNSMI+GLAK G+VD+SRRLF+KM S+
Sbjct: 159 IRNTIIYMYANCGLLSEAWRMFDEEHMELDIVAWNSMIIGLAKCGEVDESRRLFNKMVSR 218

Query: 178 STITWNSMISGYVRNGRAKEAFDLFFQMQNQKIHPTEFTMASLLTTCGRLGALEQGEWIH 357
           +T++WNSMISGYVRNGR  EA +LF +MQ + I P+EFTM SLL  C  LGA+ QG+WIH
Sbjct: 219 NTVSWNSMISGYVRNGRFLEALELFQEMQEEHIRPSEFTMVSLLNACACLGAITQGKWIH 278

Query: 358 AYIRKSKIEVNSIVLTAMVDMYSKCGSVNKALQVFVEAPKKGLSTWNSMIIGLAINGRGE 537
            YI K   E+N IV+TA++DMY KCG+  KALQVF  +PK+GLS WNSMI+GLA NG   
Sbjct: 279 DYILKQNFELNGIVVTAIIDMYCKCGNAEKALQVFTTSPKEGLSCWNSMILGLATNGCEN 338

Query: 538 EAIEMFSRLQSSGLEPDDVSFIGVLTACNHCGMVKEARKYFSLMNKTCNFKPTIKHYSCM 717
           EA ++FS+L+S  L+PD V+FIGVL ACN  GMV +A+ YFSLM +    KPTIKHYSCM
Sbjct: 339 EARQLFSKLESLSLKPDHVTFIGVLMACNSAGMVDKAKYYFSLMTEKYKIKPTIKHYSCM 398

Query: 718 VDVLGRAGFLEEA 756
           VDVLG AG LEEA
Sbjct: 399 VDVLGNAGLLEEA 411



 Score = 82.0 bits (201), Expect = 2e-13
 Identities = 58/258 (22%), Positives = 118/258 (45%), Gaps = 34/258 (13%)
 Frame = +1

Query: 85  DVVAWNSMI-MGLAKSGQVDDSRRLFDKMESKSTITWNSMISGYVRNGRAKEAFDLFFQM 261
           D++A + ++   ++ +G ++ +  +F ++++ +  TWN++I G+ ++   + A  LF  M
Sbjct: 53  DIIAASRVLAFCVSPAGDMNYAYLVFTQIKNPNLFTWNTIIRGFSQSSNPQIAISLFIDM 112

Query: 262 Q-NQKIHPTEFTMASLLTTCGRLGALEQGEWIHAYIRKSKIEVNSIVLTAMVDMYSKCGS 438
                I P   T  S+     +LG    G  +H  + K  ++ +  +   ++ MY+ CG 
Sbjct: 113 LVGSSIQPERLTYPSVFKAYAQLGLACDGRQLHGRVIKLGLDYDQFIRNTIIYMYANCGL 172

Query: 439 VNKALQVFVEAPKK-GLSTWNSMIIGLA-------------------------------I 522
           +++A ++F E   +  +  WNSMIIGLA                                
Sbjct: 173 LSEAWRMFDEEHMELDIVAWNSMIIGLAKCGEVDESRRLFNKMVSRNTVSWNSMISGYVR 232

Query: 523 NGRGEEAIEMFSRLQSSGLEPDDVSFIGVLTACNHCGMVKEARKYFSLMNKTCNFKPTIK 702
           NGR  EA+E+F  +Q   + P + + + +L AC   G + + +     + K  NF+    
Sbjct: 233 NGRFLEALELFQEMQEEHIRPSEFTMVSLLNACACLGAITQGKWIHDYILKQ-NFELNGI 291

Query: 703 HYSCMVDVLGRAGFLEEA 756
             + ++D+  + G  E+A
Sbjct: 292 VVTAIIDMYCKCGNAEKA 309


>ref|XP_006356395.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
           chloroplastic-like [Solanum tuberosum]
          Length = 522

 Score =  335 bits (860), Expect = 8e-90
 Identities = 155/252 (61%), Positives = 201/252 (79%)
 Frame = +1

Query: 1   VRNTIIFMYANCGFLSEASRLFDEDSDFDVVAWNSMIMGLAKSGQVDDSRRLFDKMESKS 180
           +RNT+++MYA+CGFL EA +LFDED   DVV+WNSMIMGLAKSG++DDS RLF KM +++
Sbjct: 157 IRNTMLYMYASCGFLVEARKLFDEDEIEDVVSWNSMIMGLAKSGEIDDSWRLFSKMSTRN 216

Query: 181 TITWNSMISGYVRNGRAKEAFDLFFQMQNQKIHPTEFTMASLLTTCGRLGALEQGEWIHA 360
            ++WNSMISG+VRNG+  EA +LF  MQ + I P+EFT+ SLL  CG LGALEQG WI+ 
Sbjct: 217 DVSWNSMISGFVRNGKWNEALELFSTMQEENIKPSEFTLVSLLNACGHLGALEQGNWIYK 276

Query: 361 YIRKSKIEVNSIVLTAMVDMYSKCGSVNKALQVFVEAPKKGLSTWNSMIIGLAINGRGEE 540
           Y++K+ +E+N IV+TA++DMY KCG+V  A  VF+    KGLS+WNSMI+GLA NG  ++
Sbjct: 277 YVKKNNVELNVIVVTAIIDMYCKCGNVEMAWHVFISISNKGLSSWNSMILGLATNGFEDD 336

Query: 541 AIEMFSRLQSSGLEPDDVSFIGVLTACNHCGMVKEARKYFSLMNKTCNFKPTIKHYSCMV 720
           AI++F+RLQ S L+PD VSFIGVLTACNH G+V +A+ YF LM K    +P+IKHY CMV
Sbjct: 337 AIKLFARLQCSILKPDSVSFIGVLTACNHSGLVDKAKDYFQLMKKEYGIEPSIKHYGCMV 396

Query: 721 DVLGRAGFLEEA 756
           D+LGRAG +EEA
Sbjct: 397 DILGRAGLVEEA 408



 Score =  100 bits (249), Expect = 6e-19
 Identities = 64/259 (24%), Positives = 124/259 (47%), Gaps = 35/259 (13%)
 Frame = +1

Query: 85  DVVAWNSMIMGLAKS---GQVDDSRRLFDKMESKSTITWNSMISGYVRNGRAKEAFDLFF 255
           D +A + ++   AKS   G ++ +  +F  +E+ +  TWN++I G+  +   + A  LF 
Sbjct: 49  DKIASSRVLAFSAKSPPIGDINYANLVFTHIENPNLFTWNTIIRGFSESSTPQYAIHLFI 108

Query: 256 QM-QNQKIHPTEFTMASLLTTCGRLGALEQGEWIHAYIRKSKIEVNSIVLTAMVDMYSKC 432
           +M  N ++ P   T  S+     R G ++ G  +H  I K  +E ++ +   M+ MY+ C
Sbjct: 109 EMLNNSQVQPHLLTYPSVFKAYARGGLVKNGAQLHGRIIKLGLEFDTFIRNTMLYMYASC 168

Query: 433 GSVNKALQVFVEAPKKGLSTWNSMIIGLA------------------------------- 519
           G + +A ++F E   + + +WNSMI+GLA                               
Sbjct: 169 GFLVEARKLFDEDEIEDVVSWNSMIMGLAKSGEIDDSWRLFSKMSTRNDVSWNSMISGFV 228

Query: 520 INGRGEEAIEMFSRLQSSGLEPDDVSFIGVLTACNHCGMVKEARKYFSLMNKTCNFKPTI 699
            NG+  EA+E+FS +Q   ++P + + + +L AC H G +++    +  + K  N +  +
Sbjct: 229 RNGKWNEALELFSTMQEENIKPSEFTLVSLLNACGHLGALEQGNWIYKYVKKN-NVELNV 287

Query: 700 KHYSCMVDVLGRAGFLEEA 756
              + ++D+  + G +E A
Sbjct: 288 IVVTAIIDMYCKCGNVEMA 306


>ref|XP_004250888.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
           chloroplastic-like [Solanum lycopersicum]
          Length = 522

 Score =  331 bits (848), Expect = 2e-88
 Identities = 152/252 (60%), Positives = 201/252 (79%)
 Frame = +1

Query: 1   VRNTIIFMYANCGFLSEASRLFDEDSDFDVVAWNSMIMGLAKSGQVDDSRRLFDKMESKS 180
           +RNT+++MYA+CGFL EA +LFDED   DVV+WNSMI+GLAKSG++DDS RLF KM +++
Sbjct: 157 IRNTLLYMYASCGFLVEARKLFDEDEIEDVVSWNSMIIGLAKSGEIDDSWRLFSKMPTRN 216

Query: 181 TITWNSMISGYVRNGRAKEAFDLFFQMQNQKIHPTEFTMASLLTTCGRLGALEQGEWIHA 360
            ++WNSMISG+VRNG+  EA +LF  MQ + + P+EFT+ SLL  CG LGALEQG WI+ 
Sbjct: 217 DVSWNSMISGFVRNGKWNEALELFSTMQEENVKPSEFTLVSLLNACGHLGALEQGNWIYK 276

Query: 361 YIRKSKIEVNSIVLTAMVDMYSKCGSVNKALQVFVEAPKKGLSTWNSMIIGLAINGRGEE 540
           Y++K+ +E+N IV+TA++DMY KC +V  A  VFV +  KGLS+WNSMI+GLA NG  ++
Sbjct: 277 YVKKNNVELNVIVVTAIIDMYCKCANVEMAWHVFVSSSNKGLSSWNSMILGLATNGFEDD 336

Query: 541 AIEMFSRLQSSGLEPDDVSFIGVLTACNHCGMVKEARKYFSLMNKTCNFKPTIKHYSCMV 720
           AI++F+RLQ S L+PD VSFIGVLTACNH G+V++A+ YF LM      +P+IKHY CMV
Sbjct: 337 AIKLFARLQCSILKPDSVSFIGVLTACNHSGLVEKAKDYFQLMKMEYGIEPSIKHYGCMV 396

Query: 721 DVLGRAGFLEEA 756
           D+LGRAG +EEA
Sbjct: 397 DILGRAGLVEEA 408



 Score = 97.8 bits (242), Expect = 4e-18
 Identities = 63/259 (24%), Positives = 122/259 (47%), Gaps = 35/259 (13%)
 Frame = +1

Query: 85  DVVAWNSMIMGLAKS---GQVDDSRRLFDKMESKSTITWNSMISGYVRNGRAKEAFDLFF 255
           D +A + ++   AKS   G ++ +  +F  +E+ +  TWN++I G+  +   + A  LF 
Sbjct: 49  DKIAASRVLAFSAKSPPIGDINYANLVFTHIENPNPFTWNTIIRGFSESSTPQYAIHLFI 108

Query: 256 QM-QNQKIHPTEFTMASLLTTCGRLGALEQGEWIHAYIRKSKIEVNSIVLTAMVDMYSKC 432
           +M  N ++ P   T  S+     R G  + G  +H  I K  +E ++ +   ++ MY+ C
Sbjct: 109 EMLNNSQVQPHLLTYPSVFKAYARGGIAKNGAQLHGRIMKLGLEFDTFIRNTLLYMYASC 168

Query: 433 GSVNKALQVFVEAPKKGLSTWNSMIIGLA------------------------------- 519
           G + +A ++F E   + + +WNSMIIGLA                               
Sbjct: 169 GFLVEARKLFDEDEIEDVVSWNSMIIGLAKSGEIDDSWRLFSKMPTRNDVSWNSMISGFV 228

Query: 520 INGRGEEAIEMFSRLQSSGLEPDDVSFIGVLTACNHCGMVKEARKYFSLMNKTCNFKPTI 699
            NG+  EA+E+FS +Q   ++P + + + +L AC H G +++    +  + K  N +  +
Sbjct: 229 RNGKWNEALELFSTMQEENVKPSEFTLVSLLNACGHLGALEQGNWIYKYVKKN-NVELNV 287

Query: 700 KHYSCMVDVLGRAGFLEEA 756
              + ++D+  +   +E A
Sbjct: 288 IVVTAIIDMYCKCANVEMA 306


>ref|XP_007141857.1| hypothetical protein PHAVU_008G231600g [Phaseolus vulgaris]
           gi|561014990|gb|ESW13851.1| hypothetical protein
           PHAVU_008G231600g [Phaseolus vulgaris]
          Length = 525

 Score =  321 bits (822), Expect = 2e-85
 Identities = 150/252 (59%), Positives = 195/252 (77%)
 Frame = +1

Query: 1   VRNTIIFMYANCGFLSEASRLFDEDSDFDVVAWNSMIMGLAKSGQVDDSRRLFDKMESKS 180
           + NTI++MYAN G +SEA R+FDE  + DVVA NSMIMGLAK G+VD SRRLFD M +++
Sbjct: 159 ISNTILYMYANSGLMSEARRVFDEPLELDVVACNSMIMGLAKCGEVDKSRRLFDNMPTRT 218

Query: 181 TITWNSMISGYVRNGRAKEAFDLFFQMQNQKIHPTEFTMASLLTTCGRLGALEQGEWIHA 360
            ++WNSMISGYVRNGR  E  +LF +MQ + + P+EFTM SLL+ C  LGAL+ GEW+H 
Sbjct: 219 AVSWNSMISGYVRNGRLTEGLELFRKMQEEGVEPSEFTMVSLLSACAHLGALQHGEWVHD 278

Query: 361 YIRKSKIEVNSIVLTAMVDMYSKCGSVNKALQVFVEAPKKGLSTWNSMIIGLAINGRGEE 540
           YI++   ++N IVLTA++DMY KCGS+ KA++VF  +P +GL  WNS+IIGLA+NG   E
Sbjct: 279 YIKRGNFKLNVIVLTAIIDMYCKCGSIEKAVEVFAASPTRGLPCWNSIIIGLALNGHERE 338

Query: 541 AIEMFSRLQSSGLEPDDVSFIGVLTACNHCGMVKEARKYFSLMNKTCNFKPTIKHYSCMV 720
           AIE FS+L+SS ++PD VSFIGVLTAC + G V+EAR YF+LM      +P+IKHY+C+V
Sbjct: 339 AIEYFSKLESSNIKPDCVSFIGVLTACKYLGAVREARDYFALMMDKYEIEPSIKHYTCLV 398

Query: 721 DVLGRAGFLEEA 756
           +VLG A  LEEA
Sbjct: 399 EVLGHAALLEEA 410



 Score =  101 bits (251), Expect = 3e-19
 Identities = 60/243 (24%), Positives = 111/243 (45%), Gaps = 31/243 (12%)
 Frame = +1

Query: 121 AKSGQVDDSRRLFDKMESKSTITWNSMISGYVRNGRAKEAFDLFFQMQNQKIHPTEFTMA 300
           + SG ++ +  +F  + + +   WN++I G+ R+   + A  LF  M    + P   T  
Sbjct: 67  SSSGDINYAYLVFTGIPNPNLYCWNTIIRGFSRSSTPQFAISLFVDMLYSAVEPQRLTYP 126

Query: 301 SLLTTCGRLGALEQGEWIHAYIRKSKIEVNSIVLTAMVDMY------------------- 423
           S+     +LGA   G  +H  + K  +E +  +   ++ MY                   
Sbjct: 127 SVFKAYAQLGAGHDGAQLHGRVVKLGLEKDQFISNTILYMYANSGLMSEARRVFDEPLEL 186

Query: 424 ------------SKCGSVNKALQVFVEAPKKGLSTWNSMIIGLAINGRGEEAIEMFSRLQ 567
                       +KCG V+K+ ++F   P +   +WNSMI G   NGR  E +E+F ++Q
Sbjct: 187 DVVACNSMIMGLAKCGEVDKSRRLFDNMPTRTAVSWNSMISGYVRNGRLTEGLELFRKMQ 246

Query: 568 SSGLEPDDVSFIGVLTACNHCGMVKEARKYFSLMNKTCNFKPTIKHYSCMVDVLGRAGFL 747
             G+EP + + + +L+AC H G ++        + K  NFK  +   + ++D+  + G +
Sbjct: 247 EEGVEPSEFTMVSLLSACAHLGALQHGEWVHDYI-KRGNFKLNVIVLTAIIDMYCKCGSI 305

Query: 748 EEA 756
           E+A
Sbjct: 306 EKA 308


>ref|XP_003545143.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
           chloroplastic-like [Glycine max]
          Length = 534

 Score =  321 bits (822), Expect = 2e-85
 Identities = 154/252 (61%), Positives = 197/252 (78%)
 Frame = +1

Query: 1   VRNTIIFMYANCGFLSEASRLFDEDSDFDVVAWNSMIMGLAKSGQVDDSRRLFDKMESKS 180
           ++NTII+MYAN G LSEA R+FDE  D DVVA NSMIMGLAK G+VD SRRLFD M +++
Sbjct: 161 IQNTIIYMYANSGLLSEARRVFDELVDLDVVACNSMIMGLAKCGEVDKSRRLFDNMPTRT 220

Query: 181 TITWNSMISGYVRNGRAKEAFDLFFQMQNQKIHPTEFTMASLLTTCGRLGALEQGEWIHA 360
            +TWNSMISGYVRN R  EA +LF +MQ +++ P+EFTM SLL+ C  LGAL+ GEW+H 
Sbjct: 221 RVTWNSMISGYVRNKRLMEALELFRKMQGERVEPSEFTMVSLLSACAHLGALKHGEWVHD 280

Query: 361 YIRKSKIEVNSIVLTAMVDMYSKCGSVNKALQVFVEAPKKGLSTWNSMIIGLAINGRGEE 540
           Y+++   E+N IVLTA++DMY KCG + KA++VF  +P +GLS WNS+IIGLA+NG   +
Sbjct: 281 YVKRGHFELNVIVLTAIIDMYCKCGVIVKAIEVFEASPTRGLSCWNSIIIGLALNGYERK 340

Query: 541 AIEMFSRLQSSGLEPDDVSFIGVLTACNHCGMVKEARKYFSLMNKTCNFKPTIKHYSCMV 720
           AIE FS+L++S L+PD VSFIGVLTAC + G V +AR YFSLM      +P+IKHY+CMV
Sbjct: 341 AIEYFSKLEASDLKPDHVSFIGVLTACKYIGAVGKARDYFSLMMNKYEIEPSIKHYTCMV 400

Query: 721 DVLGRAGFLEEA 756
           +VLG+A  LEEA
Sbjct: 401 EVLGQAALLEEA 412



 Score = 94.0 bits (232), Expect = 5e-17
 Identities = 60/243 (24%), Positives = 108/243 (44%), Gaps = 31/243 (12%)
 Frame = +1

Query: 121 AKSGQVDDSRRLFDKMESKSTITWNSMISGYVRNGRAKEAFDLFFQMQNQKIHPTEFTMA 300
           + SG ++ +  LF  + S +   WN++I G+ R+     A  LF  M    + P   T  
Sbjct: 69  SSSGDINYAYLLFTTIPSPNLYCWNTIIRGFSRSSTPHLAISLFVDMLCSSVLPQRLTYP 128

Query: 301 SLLTTCGRLGALEQGEWIHAYIRKSKIEVNSIVLTAMVDMY------------------- 423
           S+     +LGA   G  +H  + K  +E +  +   ++ MY                   
Sbjct: 129 SVFKAYAQLGAGYDGAQLHGRVVKLGLEKDQFIQNTIIYMYANSGLLSEARRVFDELVDL 188

Query: 424 ------------SKCGSVNKALQVFVEAPKKGLSTWNSMIIGLAINGRGEEAIEMFSRLQ 567
                       +KCG V+K+ ++F   P +   TWNSMI G   N R  EA+E+F ++Q
Sbjct: 189 DVVACNSMIMGLAKCGEVDKSRRLFDNMPTRTRVTWNSMISGYVRNKRLMEALELFRKMQ 248

Query: 568 SSGLEPDDVSFIGVLTACNHCGMVKEARKYFSLMNKTCNFKPTIKHYSCMVDVLGRAGFL 747
              +EP + + + +L+AC H G +K        + K  +F+  +   + ++D+  + G +
Sbjct: 249 GERVEPSEFTMVSLLSACAHLGALKHGEWVHDYV-KRGHFELNVIVLTAIIDMYCKCGVI 307

Query: 748 EEA 756
            +A
Sbjct: 308 VKA 310


>ref|XP_004151347.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
           chloroplastic-like [Cucumis sativus]
           gi|449530724|ref|XP_004172343.1| PREDICTED:
           pentatricopeptide repeat-containing protein At2g42920,
           chloroplastic-like [Cucumis sativus]
          Length = 543

 Score =  320 bits (819), Expect = 4e-85
 Identities = 149/252 (59%), Positives = 198/252 (78%)
 Frame = +1

Query: 1   VRNTIIFMYANCGFLSEASRLFDEDSDFDVVAWNSMIMGLAKSGQVDDSRRLFDKMESKS 180
           +RNTI++MYA  GFLSEA R+F+++ +FDVV+WNSMI+GLAK G++D+SR+LFDKM  K+
Sbjct: 161 IRNTILYMYATGGFLSEARRIFNQEMEFDVVSWNSMILGLAKCGEIDESRKLFDKMPVKN 220

Query: 181 TITWNSMISGYVRNGRAKEAFDLFFQMQNQKIHPTEFTMASLLTTCGRLGALEQGEWIHA 360
            I+WNSMI GYVRNG  KEA  LF +MQ ++I P+EFTM SLL    ++GAL QG WIH 
Sbjct: 221 PISWNSMIGGYVRNGMFKEALKLFIKMQEERIQPSEFTMVSLLNASAQIGALRQGVWIHE 280

Query: 361 YIRKSKIEVNSIVLTAMVDMYSKCGSVNKALQVFVEAPKKGLSTWNSMIIGLAINGRGEE 540
           YI+K+ +++N+IV+TA++DMY KCGS+  ALQVF + P + LS+WNSMI GLA+NG  +E
Sbjct: 281 YIKKNNLQLNAIVVTAIIDMYCKCGSIGNALQVFEKIPCRSLSSWNSMIFGLAVNGCEKE 340

Query: 541 AIEMFSRLQSSGLEPDDVSFIGVLTACNHCGMVKEARKYFSLMNKTCNFKPTIKHYSCMV 720
           AI +F  L+SS L+PD +SF+ VLTACNH  MV E  ++FS M  T   +P+IKHY+ MV
Sbjct: 341 AILVFKMLESSSLKPDCISFMAVLTACNHGAMVDEGMEFFSRMKNTYRIEPSIKHYNLMV 400

Query: 721 DVLGRAGFLEEA 756
           D++ RAGFLEEA
Sbjct: 401 DMISRAGFLEEA 412



 Score = 76.3 bits (186), Expect = 1e-11
 Identities = 46/183 (25%), Positives = 95/183 (51%), Gaps = 1/183 (0%)
 Frame = +1

Query: 130 GQVDDSRRLFDKMESKSTITWNSMISGYVRNGRAKEAFDLFFQMQ-NQKIHPTEFTMASL 306
           G +D +  +F +M++ +  +WN++I G+ ++   + A  LF  M  + ++ P   T  S+
Sbjct: 71  GNMDYAYLVFLQMQNPNLFSWNTVIRGFSQSSNPQIALYLFIDMLVSSQVEPQRLTYPSI 130

Query: 307 LTTCGRLGALEQGEWIHAYIRKSKIEVNSIVLTAMVDMYSKCGSVNKALQVFVEAPKKGL 486
                +LG    G  +H  I K  ++ +  +   ++ MY+  G +++A ++F +  +  +
Sbjct: 131 FKAYSQLGLAHDGAQLHGRIIKLGLQFDPFIRNTILYMYATGGFLSEARRIFNQEMEFDV 190

Query: 487 STWNSMIIGLAINGRGEEAIEMFSRLQSSGLEPDDVSFIGVLTACNHCGMVKEARKYFSL 666
            +WNSMI+GLA  G  +E+ ++F ++       + +S+  ++      GM KEA K F  
Sbjct: 191 VSWNSMILGLAKCGEIDESRKLFDKMPVK----NPISWNSMIGGYVRNGMFKEALKLFIK 246

Query: 667 MNK 675
           M +
Sbjct: 247 MQE 249


>ref|XP_004491336.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
           chloroplastic-like [Cicer arietinum]
          Length = 536

 Score =  313 bits (801), Expect = 5e-83
 Identities = 150/254 (59%), Positives = 196/254 (77%), Gaps = 2/254 (0%)
 Frame = +1

Query: 1   VRNTIIFMYANCGFLSEASRLFDEDSDF-DVVAWNSMIMGLAKSGQVDDSRRLFDKMESK 177
           + NTII+MYAN G LSEA R+FDE  +  DVVA+NSMIMG AK G++D++R+LFD+M ++
Sbjct: 161 IHNTIIYMYANSGLLSEAKRVFDEKLELGDVVAFNSMIMGFAKCGEIDEARKLFDEMFTR 220

Query: 178 STITWNSMISGYVRNGRAKEAFDLFFQMQ-NQKIHPTEFTMASLLTTCGRLGALEQGEWI 354
           +++TWNSMISGYVRNG+  EA +LF +MQ  +++ P+EFTM SLL  C  LGAL+ G+W+
Sbjct: 221 TSVTWNSMISGYVRNGKLMEALELFHKMQLEERVEPSEFTMVSLLNACAHLGALQHGKWV 280

Query: 355 HAYIRKSKIEVNSIVLTAMVDMYSKCGSVNKALQVFVEAPKKGLSTWNSMIIGLAINGRG 534
           H YI+++  E+N IVLTA++DMY KCGSV  A+QVF   P +GLS WNS+IIGLA+NG  
Sbjct: 281 HDYIKRNDFELNVIVLTAIIDMYCKCGSVENAIQVFDTYPGRGLSCWNSIIIGLAMNGHE 340

Query: 535 EEAIEMFSRLQSSGLEPDDVSFIGVLTACNHCGMVKEARKYFSLMNKTCNFKPTIKHYSC 714
            EA E FS L+ S  +PD VSFIGVLTAC H G V +A+ YF+LM      +P+IKHY+C
Sbjct: 341 REAFEFFSELELSKFKPDSVSFIGVLTACKHLGAVDKAKDYFALMMNEYKIEPSIKHYTC 400

Query: 715 MVDVLGRAGFLEEA 756
           MV+VLG+A FLEEA
Sbjct: 401 MVEVLGQAAFLEEA 414



 Score = 77.4 bits (189), Expect = 5e-12
 Identities = 56/254 (22%), Positives = 122/254 (48%), Gaps = 6/254 (2%)
 Frame = +1

Query: 13  IIFMYANCGFLSEASRLFDEDSDFDVVAWNSMIMGLAKSGQVDDSRRLF-DKMESK---S 180
           + F  +  G ++ A +LF    + ++ +WN++I   ++S     +  LF D + S+    
Sbjct: 64  LTFCASPSGNINYAYKLFARMPNPNLYSWNTIIRAFSRSSTPQFAISLFVDMLYSQIQPQ 123

Query: 181 TITWNSMISGYVRNGRAKEAFDLFFQMQNQKIHPTEFTMASLLTTCGRLGALEQGEWIHA 360
            +T+ S+   Y +         L   +    +   +F   +++      G L + + +  
Sbjct: 124 HLTYPSVFKAYAQLSAGDYGSQLHGMVVKLGLQRDQFIHNTIIYMYANSGLLSEAKRVF- 182

Query: 361 YIRKSKIEVNSIV-LTAMVDMYSKCGSVNKALQVFVEAPKKGLSTWNSMIIGLAINGRGE 537
                K+E+  +V   +M+  ++KCG +++A ++F E   +   TWNSMI G   NG+  
Sbjct: 183 ---DEKLELGDVVAFNSMIMGFAKCGEIDEARKLFDEMFTRTSVTWNSMISGYVRNGKLM 239

Query: 538 EAIEMFSRLQ-SSGLEPDDVSFIGVLTACNHCGMVKEARKYFSLMNKTCNFKPTIKHYSC 714
           EA+E+F ++Q    +EP + + + +L AC H G ++  +     + +  +F+  +   + 
Sbjct: 240 EALELFHKMQLEERVEPSEFTMVSLLNACAHLGALQHGKWVHDYIKRN-DFELNVIVLTA 298

Query: 715 MVDVLGRAGFLEEA 756
           ++D+  + G +E A
Sbjct: 299 IIDMYCKCGSVENA 312


>gb|EYU29595.1| hypothetical protein MIMGU_mgv1a025435mg [Mimulus guttatus]
          Length = 505

 Score =  311 bits (797), Expect = 2e-82
 Identities = 151/256 (58%), Positives = 194/256 (75%), Gaps = 4/256 (1%)
 Frame = +1

Query: 1   VRNTIIFMYANCGFLSEASRLFDEDSDFDVVAWNSMIMGLAKSGQVDDSRRLFDKMESKS 180
           +RN+II MYA+CG    A +LFDED D DVVAWNSM+MGLAK G+VD+S RLF K+  ++
Sbjct: 144 IRNSIIHMYADCGLFGSARKLFDEDEDTDVVAWNSMVMGLAKCGEVDESWRLFCKIPCRN 203

Query: 181 TITWNSMISGYVRNGRAKEAFDLFFQMQNQKIHPTEFTMASLLTTCGRLGALEQGEWIHA 360
            I+WN+MISGYVRNG+  +A  LF +MQ ++I P+EFT+ S+L  C +LGALEQG+WIH 
Sbjct: 204 DISWNTMISGYVRNGKWVDALSLFAEMQQRQIRPSEFTLVSMLNACAKLGALEQGKWIHR 263

Query: 361 YIRKS---KIEVNSIVLTAMVDMYSKCGSVNKALQVFVEAPKKGLSTWNSMIIGLAINGR 531
           YI+KS    I+ N+IV+TA++DMY KCG +  A +VF   P+K LS WNSMI+GLA NG 
Sbjct: 264 YIKKSDINNIDRNTIVVTAIIDMYCKCGDIKTAREVFESTPQKALSGWNSMILGLATNGF 323

Query: 532 GEEAIEMFSRL-QSSGLEPDDVSFIGVLTACNHCGMVKEARKYFSLMNKTCNFKPTIKHY 708
            EEA ++F+ L QSS L PD VSFIGVLTA NH   V +AR+YF +M +T   +PTIKHY
Sbjct: 324 EEEAFQLFTELEQSSNLNPDSVSFIGVLTASNHSVRVDKAREYFKVMKETYGIEPTIKHY 383

Query: 709 SCMVDVLGRAGFLEEA 756
            C+VDVLGRAG +E+A
Sbjct: 384 GCLVDVLGRAGLIEQA 399



 Score = 79.0 bits (193), Expect = 2e-12
 Identities = 51/224 (22%), Positives = 95/224 (42%), Gaps = 35/224 (15%)
 Frame = +1

Query: 85  DVVAWNSMIMGLAKSG---QVDDSRRLFDKMESKSTITWNSMISGYVRNGRAKEAFDLFF 255
           D +A + ++   A  G    +D +  +F  +E  +  TWN++I G+ ++     A  LF 
Sbjct: 36  DTIAVSRILAFCAAPGPARDLDYAFSVFSHIEKPNLFTWNTIIRGFCQSSHPHVAISLFV 95

Query: 256 QM-QNQKIHPTEFTMASLLTTCGRLGALEQGEWIHAYIRKSKIEVNSIVLTAMVDMYSKC 432
            M  N  + P   T  S+     +LG    G  +H  I K   E +  +  +++ MY+ C
Sbjct: 96  DMLTNSTLEPENLTYPSVFKAYTQLGLAGDGAQLHGRIIKLGFEHDPFIRNSIIHMYADC 155

Query: 433 GSVNKALQVFVEAPKKGLSTWNSMIIGLA------------------------------- 519
           G    A ++F E     +  WNSM++GLA                               
Sbjct: 156 GLFGSARKLFDEDEDTDVVAWNSMVMGLAKCGEVDESWRLFCKIPCRNDISWNTMISGYV 215

Query: 520 INGRGEEAIEMFSRLQSSGLEPDDVSFIGVLTACNHCGMVKEAR 651
            NG+  +A+ +F+ +Q   + P + + + +L AC   G +++ +
Sbjct: 216 RNGKWVDALSLFAEMQQRQIRPSEFTLVSMLNACAKLGALEQGK 259


>ref|XP_003617444.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355518779|gb|AET00403.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 542

 Score =  302 bits (773), Expect = 1e-79
 Identities = 149/255 (58%), Positives = 192/255 (75%), Gaps = 5/255 (1%)
 Frame = +1

Query: 7   NTIIFMYANCGFLSEASRLFD----EDSDFDVVAWNSMIMGLAKSGQVDDSRRLFDKMES 174
           NTII+MYAN G +SEA R+FD    E  D DVVA NSMIMG AK G++D+SR LFD M +
Sbjct: 166 NTIIYMYANGGLMSEARRVFDGKKLELYDHDVVAINSMIMGYAKCGEIDESRNLFDDMIT 225

Query: 175 KSTITWNSMISGYVRNGRAKEAFDLFFQMQNQKIHPTEFTMASLLTTCGRLGALEQGEWI 354
           +++++WNSMISGYVRNG+  EA +LF +MQ +    +EFTM SLL  C  LGAL+ G+W+
Sbjct: 226 RTSVSWNSMISGYVRNGKLMEALELFNKMQVEGFEVSEFTMVSLLNACAHLGALQHGKWV 285

Query: 355 HAYIRKSKIEVNSIVLTAMVDMYSKCGSVNKALQVFVEAPKKGLSTWNSMIIGLAINGRG 534
           H YI+++  E+N IV+TA++DMY KCGSV  A++VF   P++GLS WNS+IIGLA+NG  
Sbjct: 286 HDYIKRNHFELNVIVVTAIIDMYCKCGSVENAVEVFETCPRRGLSCWNSIIIGLAMNGHE 345

Query: 535 EEAIEMFSRLQSSG-LEPDDVSFIGVLTACNHCGMVKEARKYFSLMNKTCNFKPTIKHYS 711
            EA E FS+L+SS  L+PD VSFIGVLTAC H G + +AR YF LM      +P+IKHY+
Sbjct: 346 REAFEFFSKLESSKLLKPDSVSFIGVLTACKHLGAINKARDYFELMMNKYEIEPSIKHYT 405

Query: 712 CMVDVLGRAGFLEEA 756
           C+VDVLG+AG LEEA
Sbjct: 406 CIVDVLGQAGLLEEA 420



 Score = 89.4 bits (220), Expect = 1e-15
 Identities = 55/245 (22%), Positives = 113/245 (46%), Gaps = 35/245 (14%)
 Frame = +1

Query: 127 SGQVDDSRRLFDKMESKSTITWNSMISGYVRNGRAKEAFDLFFQMQNQKIHPTEFTMASL 306
           SG ++ + +LF +M + +  +WN++I  + R+   + A  LF  M   +I P   T  S+
Sbjct: 74  SGNINYAYKLFVRMPNPNLYSWNTIIRAFSRSSTPQFAISLFVDMLYSQIQPQYLTYPSV 133

Query: 307 LTTCGRLGALEQGEWIHAYIRK--------------------------------SKIEV- 387
                +LG    G  +H  + K                                 K+E+ 
Sbjct: 134 FKAYAQLGHAHYGAQLHGRVVKLGLQNDQFICNTIIYMYANGGLMSEARRVFDGKKLELY 193

Query: 388 --NSIVLTAMVDMYSKCGSVNKALQVFVEAPKKGLSTWNSMIIGLAINGRGEEAIEMFSR 561
             + + + +M+  Y+KCG ++++  +F +   +   +WNSMI G   NG+  EA+E+F++
Sbjct: 194 DHDVVAINSMIMGYAKCGEIDESRNLFDDMITRTSVSWNSMISGYVRNGKLMEALELFNK 253

Query: 562 LQSSGLEPDDVSFIGVLTACNHCGMVKEARKYFSLMNKTCNFKPTIKHYSCMVDVLGRAG 741
           +Q  G E  + + + +L AC H G ++  +     + +  +F+  +   + ++D+  + G
Sbjct: 254 MQVEGFEVSEFTMVSLLNACAHLGALQHGKWVHDYIKRN-HFELNVIVVTAIIDMYCKCG 312

Query: 742 FLEEA 756
            +E A
Sbjct: 313 SVENA 317


>ref|XP_006411565.1| hypothetical protein EUTSA_v10017572mg [Eutrema salsugineum]
           gi|557112734|gb|ESQ53018.1| hypothetical protein
           EUTSA_v10017572mg [Eutrema salsugineum]
          Length = 546

 Score =  298 bits (764), Expect = 1e-78
 Identities = 142/252 (56%), Positives = 188/252 (74%)
 Frame = +1

Query: 1   VRNTIIFMYANCGFLSEASRLFDEDSDFDVVAWNSMIMGLAKSGQVDDSRRLFDKMESKS 180
           +RNT++ MYA CG   EA R+F     FDVVAWNSM+MGLA+ G ++ +++LFD+M  ++
Sbjct: 162 IRNTMLHMYATCGCFVEAWRIFMAMKHFDVVAWNSMMMGLARYGLIEQAQKLFDEMPQRN 221

Query: 181 TITWNSMISGYVRNGRAKEAFDLFFQMQNQKIHPTEFTMASLLTTCGRLGALEQGEWIHA 360
            I+WNSMISG+V+NGR K+A ++F +MQ + + P  FTM SLL  C  LGA EQG WIH 
Sbjct: 222 EISWNSMISGFVKNGRFKDALEMFRKMQERNVKPDGFTMVSLLNACAYLGASEQGRWIHE 281

Query: 361 YIRKSKIEVNSIVLTAMVDMYSKCGSVNKALQVFVEAPKKGLSTWNSMIIGLAINGRGEE 540
           YI K++ E+NSIV+TA++DMY KCG + + L+VF  AP K LS WNSM++GLA NG  E 
Sbjct: 282 YIVKNRFELNSIVITALIDMYCKCGCIEEGLRVFESAPNKQLSCWNSMVLGLANNGYEER 341

Query: 541 AIEMFSRLQSSGLEPDDVSFIGVLTACNHCGMVKEARKYFSLMNKTCNFKPTIKHYSCMV 720
           A+++FS L+SS LEPD VSFIGVLTAC + G V EA ++F LM +    +P+IKHY+CMV
Sbjct: 342 AMDLFSELESSDLEPDSVSFIGVLTACAYSGKVDEAGEFFRLMREKYLIEPSIKHYTCMV 401

Query: 721 DVLGRAGFLEEA 756
           +VLG AG LEEA
Sbjct: 402 NVLGGAGLLEEA 413



 Score = 87.0 bits (214), Expect = 6e-15
 Identities = 55/232 (23%), Positives = 102/232 (43%), Gaps = 32/232 (13%)
 Frame = +1

Query: 154 LFDKMESKSTITWNSMISGYVRNGRAKEAFDLFFQM-QNQKIHPTEFTMASLLTTCGRLG 330
           LF ++  K+   WN++I G+ R+   + +  +F  M  +    P   T  S+      LG
Sbjct: 80  LFTRINHKNPFVWNTIIRGFSRSSFPEMSITIFIDMFSSASAKPQRLTYPSVFKAYASLG 139

Query: 331 ALEQGEWIHAYIRKSKIEVNSIVLTAMVDMYSKCGSVNKALQVFVEAPKKGLSTWNSMII 510
               G  +H  + K  +E +S +   M+ MY+ CG   +A ++F+      +  WNSM++
Sbjct: 140 KARDGMQLHGMVIKEGLEDDSFIRNTMLHMYATCGCFVEAWRIFMAMKHFDVVAWNSMMM 199

Query: 511 GLA-------------------------------INGRGEEAIEMFSRLQSSGLEPDDVS 597
           GLA                                NGR ++A+EMF ++Q   ++PD  +
Sbjct: 200 GLARYGLIEQAQKLFDEMPQRNEISWNSMISGFVKNGRFKDALEMFRKMQERNVKPDGFT 259

Query: 598 FIGVLTACNHCGMVKEARKYFSLMNKTCNFKPTIKHYSCMVDVLGRAGFLEE 753
            + +L AC + G  ++ R     + K   F+      + ++D+  + G +EE
Sbjct: 260 MVSLLNACAYLGASEQGRWIHEYIVKN-RFELNSIVITALIDMYCKCGCIEE 310


>ref|NP_181820.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75206274|sp|Q9SJG6.1|PP200_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At2g42920, chloroplastic; Flags: Precursor
           gi|4512663|gb|AAD21717.1| hypothetical protein
           [Arabidopsis thaliana] gi|20197867|gb|AAM15291.1|
           hypothetical protein [Arabidopsis thaliana]
           gi|110738441|dbj|BAF01146.1| hypothetical protein
           [Arabidopsis thaliana] gi|330255093|gb|AEC10187.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 559

 Score =  296 bits (759), Expect = 4e-78
 Identities = 145/252 (57%), Positives = 184/252 (73%)
 Frame = +1

Query: 1   VRNTIIFMYANCGFLSEASRLFDEDSDFDVVAWNSMIMGLAKSGQVDDSRRLFDKMESKS 180
           +RNT++ MY  CG L EA R+F     FDVVAWNSMIMG AK G +D ++ LFD+M  ++
Sbjct: 163 IRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCGLIDQAQNLFDEMPQRN 222

Query: 181 TITWNSMISGYVRNGRAKEAFDLFFQMQNQKIHPTEFTMASLLTTCGRLGALEQGEWIHA 360
            ++WNSMISG+VRNGR K+A D+F +MQ + + P  FTM SLL  C  LGA EQG WIH 
Sbjct: 223 GVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACAYLGASEQGRWIHE 282

Query: 361 YIRKSKIEVNSIVLTAMVDMYSKCGSVNKALQVFVEAPKKGLSTWNSMIIGLAINGRGEE 540
           YI +++ E+NSIV+TA++DMY KCG + + L VF  APKK LS WNSMI+GLA NG  E 
Sbjct: 283 YIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLSCWNSMILGLANNGFEER 342

Query: 541 AIEMFSRLQSSGLEPDDVSFIGVLTACNHCGMVKEARKYFSLMNKTCNFKPTIKHYSCMV 720
           A+++FS L+ SGLEPD VSFIGVLTAC H G V  A ++F LM +    +P+IKHY+ MV
Sbjct: 343 AMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFFRLMKEKYMIEPSIKHYTLMV 402

Query: 721 DVLGRAGFLEEA 756
           +VLG AG LEEA
Sbjct: 403 NVLGGAGLLEEA 414



 Score = 88.6 bits (218), Expect = 2e-15
 Identities = 55/233 (23%), Positives = 103/233 (44%), Gaps = 33/233 (14%)
 Frame = +1

Query: 154 LFDKMESKSTITWNSMISGYVRNGRAKEAFDLFFQM--QNQKIHPTEFTMASLLTTCGRL 327
           +F ++  K+   WN++I G+ R+   + A  +F  M   +  + P   T  S+    GRL
Sbjct: 80  VFTRINHKNPFVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRL 139

Query: 328 GALEQGEWIHAYIRKSKIEVNSIVLTAMVDMYSKCGSVNKALQVFVEAPKKGLSTWNSMI 507
           G    G  +H  + K  +E +S +   M+ MY  CG + +A ++F+      +  WNSMI
Sbjct: 140 GQARDGRQLHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMI 199

Query: 508 IGLA-------------------------------INGRGEEAIEMFSRLQSSGLEPDDV 594
           +G A                                NGR ++A++MF  +Q   ++PD  
Sbjct: 200 MGFAKCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGF 259

Query: 595 SFIGVLTACNHCGMVKEARKYFSLMNKTCNFKPTIKHYSCMVDVLGRAGFLEE 753
           + + +L AC + G  ++ R     + +   F+      + ++D+  + G +EE
Sbjct: 260 TMVSLLNACAYLGASEQGRWIHEYIVRN-RFELNSIVVTALIDMYCKCGCIEE 311


>ref|XP_002880012.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297325851|gb|EFH56271.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 542

 Score =  294 bits (752), Expect = 3e-77
 Identities = 142/252 (56%), Positives = 186/252 (73%)
 Frame = +1

Query: 1   VRNTIIFMYANCGFLSEASRLFDEDSDFDVVAWNSMIMGLAKSGQVDDSRRLFDKMESKS 180
           +RNT++ MY  CG L EA RLF     FDVVAWNS+IMGLAK G +D +++LFD+M  ++
Sbjct: 163 IRNTMLHMYVTCGCLVEAWRLFVGMMGFDVVAWNSIIMGLAKCGLIDQAQKLFDEMPQRN 222

Query: 181 TITWNSMISGYVRNGRAKEAFDLFFQMQNQKIHPTEFTMASLLTTCGRLGALEQGEWIHA 360
            ++WNSMISG+VRNGR K+A ++F +MQ + + P  FTM SLL  C  LGA EQG WIH 
Sbjct: 223 GVSWNSMISGFVRNGRFKDALEMFREMQERDVKPDGFTMVSLLNACAYLGASEQGRWIHK 282

Query: 361 YIRKSKIEVNSIVLTAMVDMYSKCGSVNKALQVFVEAPKKGLSTWNSMIIGLAINGRGEE 540
           YI +++ E+NSIV+TA++DMY KCG   + L+VF  AP K LS WNSMI+GLA NG  E 
Sbjct: 283 YIVRNRFELNSIVITALIDMYCKCGCFEEGLKVFECAPTKQLSCWNSMILGLANNGCEER 342

Query: 541 AIEMFSRLQSSGLEPDDVSFIGVLTACNHCGMVKEARKYFSLMNKTCNFKPTIKHYSCMV 720
           A+++F  L+ +GLEPD VSFIGVLTAC H G V +A ++F LM +    +P+IKHY+CMV
Sbjct: 343 AMDLFLELERTGLEPDSVSFIGVLTACAHSGEVHKAGEFFRLMREKYMIEPSIKHYTCMV 402

Query: 721 DVLGRAGFLEEA 756
           +VLG AG L+EA
Sbjct: 403 NVLGGAGLLDEA 414



 Score = 84.3 bits (207), Expect = 4e-14
 Identities = 55/233 (23%), Positives = 101/233 (43%), Gaps = 33/233 (14%)
 Frame = +1

Query: 154 LFDKMESKSTITWNSMISGYVRNGRAKEAFDLFFQM--QNQKIHPTEFTMASLLTTCGRL 327
           +F ++  K+   WN++I G+ R+   + A  +F  M   +  + P   T  S+      L
Sbjct: 80  VFTRINHKNPFVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYASL 139

Query: 328 GALEQGEWIHAYIRKSKIEVNSIVLTAMVDMYSKCGSVNKALQVFVEAPKKGLSTWNSMI 507
           G    G  +H  + K  +E +S +   M+ MY  CG + +A ++FV      +  WNS+I
Sbjct: 140 GLARDGRQLHGRVIKEGLEDDSFIRNTMLHMYVTCGCLVEAWRLFVGMMGFDVVAWNSII 199

Query: 508 IGLA-------------------------------INGRGEEAIEMFSRLQSSGLEPDDV 594
           +GLA                                NGR ++A+EMF  +Q   ++PD  
Sbjct: 200 MGLAKCGLIDQAQKLFDEMPQRNGVSWNSMISGFVRNGRFKDALEMFREMQERDVKPDGF 259

Query: 595 SFIGVLTACNHCGMVKEARKYFSLMNKTCNFKPTIKHYSCMVDVLGRAGFLEE 753
           + + +L AC + G  ++ R     + +   F+      + ++D+  + G  EE
Sbjct: 260 TMVSLLNACAYLGASEQGRWIHKYIVRN-RFELNSIVITALIDMYCKCGCFEE 311


>ref|XP_006293939.1| hypothetical protein CARUB_v10022931mg [Capsella rubella]
           gi|565472276|ref|XP_006293940.1| hypothetical protein
           CARUB_v10022931mg [Capsella rubella]
           gi|482562647|gb|EOA26837.1| hypothetical protein
           CARUB_v10022931mg [Capsella rubella]
           gi|482562648|gb|EOA26838.1| hypothetical protein
           CARUB_v10022931mg [Capsella rubella]
          Length = 555

 Score =  289 bits (739), Expect = 8e-76
 Identities = 140/252 (55%), Positives = 186/252 (73%)
 Frame = +1

Query: 1   VRNTIIFMYANCGFLSEASRLFDEDSDFDVVAWNSMIMGLAKSGQVDDSRRLFDKMESKS 180
           +RNT++ MY   G L EA R+F   +DFDVVAWNSMIMGLAK G +  +++LFD+M  ++
Sbjct: 158 IRNTMLQMYVTSGCLVEAWRIFVGMTDFDVVAWNSMIMGLAKCGLISQAQQLFDEMPHRN 217

Query: 181 TITWNSMISGYVRNGRAKEAFDLFFQMQNQKIHPTEFTMASLLTTCGRLGALEQGEWIHA 360
            ++WNSMISG+VRNGR K+A ++F +MQ + + P  FTM SLL  C  LGA EQG WIH 
Sbjct: 218 EVSWNSMISGFVRNGRFKDALEMFREMQERNVKPDGFTMVSLLNACAYLGANEQGRWIHE 277

Query: 361 YIRKSKIEVNSIVLTAMVDMYSKCGSVNKALQVFVEAPKKGLSTWNSMIIGLAINGRGEE 540
           YI +++ E+NSIV+TA+++MY KCG + + L+VF  APKK LS WNSMI+GLA NG  E 
Sbjct: 278 YIARNRFELNSIVITALIEMYCKCGCIEEGLKVFECAPKKQLSCWNSMILGLANNGCEER 337

Query: 541 AIEMFSRLQSSGLEPDDVSFIGVLTACNHCGMVKEARKYFSLMNKTCNFKPTIKHYSCMV 720
           A+++F  L+  GLEPD VSFIGVLTAC + G V +A  +F LM +    +P+IKHY+CMV
Sbjct: 338 AMDLFLELERFGLEPDSVSFIGVLTACAYSGEVHKAGGFFRLMREKYMVEPSIKHYTCMV 397

Query: 721 DVLGRAGFLEEA 756
           +VLG AG L+EA
Sbjct: 398 NVLGGAGLLDEA 409



 Score = 85.9 bits (211), Expect = 1e-14
 Identities = 55/233 (23%), Positives = 103/233 (44%), Gaps = 33/233 (14%)
 Frame = +1

Query: 154 LFDKMESKSTITWNSMISGYVRNGRAKEAFDLFFQM--QNQKIHPTEFTMASLLTTCGRL 327
           +F ++  K+   WN++I G+ ++   + A  +F  M   +  + P   T  S+    GRL
Sbjct: 75  VFTRINHKNPFVWNTIIRGFSQSSFPEMAISIFIDMLCSSPSVKPQNLTYPSVFKAYGRL 134

Query: 328 GALEQGEWIHAYIRKSKIEVNSIVLTAMVDMYSKCGSVNKALQVFVEAPKKGLSTWNSMI 507
           G    G  +H  + K  +E +S +   M+ MY   G + +A ++FV      +  WNSMI
Sbjct: 135 GQAIDGRQLHGRVLKEGLEDDSFIRNTMLQMYVTSGCLVEAWRIFVGMTDFDVVAWNSMI 194

Query: 508 IGLA-------------------------------INGRGEEAIEMFSRLQSSGLEPDDV 594
           +GLA                                NGR ++A+EMF  +Q   ++PD  
Sbjct: 195 MGLAKCGLISQAQQLFDEMPHRNEVSWNSMISGFVRNGRFKDALEMFREMQERNVKPDGF 254

Query: 595 SFIGVLTACNHCGMVKEARKYFSLMNKTCNFKPTIKHYSCMVDVLGRAGFLEE 753
           + + +L AC + G  ++ R     + +   F+      + ++++  + G +EE
Sbjct: 255 TMVSLLNACAYLGANEQGRWIHEYIARN-RFELNSIVITALIEMYCKCGCIEE 306