BLASTX nr result

ID: Sinomenium22_contig00040004 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium22_contig00040004
         (595 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EXB45098.1| NF-X1-type zinc finger protein NFXL1 [Morus notab...    59   1e-06
ref|XP_002321572.2| hypothetical protein POPTR_0015s05030g [Popu...    57   5e-06
ref|XP_007031673.1| NF-X-like 1 isoform 1 [Theobroma cacao] gi|5...    57   5e-06
ref|XP_002279249.2| PREDICTED: NF-X1-type zinc finger protein NF...    56   7e-06
emb|CAN70583.1| hypothetical protein VITISV_024983 [Vitis vinifera]    56   7e-06

>gb|EXB45098.1| NF-X1-type zinc finger protein NFXL1 [Morus notabilis]
          Length = 1109

 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 48/127 (37%), Positives = 65/127 (51%), Gaps = 20/127 (15%)
 Frame = +3

Query: 273 SNKDQRNRDGNRNN---SRVPRQEWVPRGGSSSTAATDTLTNPPSSLNSDTA-----CAN 428
           SN     RD NR     S+  RQEWVPRG ++    T T+ NP  S +S+T       +N
Sbjct: 3   SNVSSERRDNNRPTRFASQTARQEWVPRGATT----TMTVVNPVLSSDSNTTGNGGRDSN 58

Query: 429 RGGLV-DDRNRGNFT---RRSYVLRYSNSR-----KEGEREMNSDRSATT---VARDLNV 572
            G      R+RGN +    R  V R++N R     KE ER +  +RS +    V +D+N+
Sbjct: 59  HGSTTSQSRSRGNNSSTGSRGQVNRWTNHRREREKKEKERSVTQERSTSEDEGVLKDVNL 118

Query: 573 PQLVQEI 593
           P LVQEI
Sbjct: 119 PHLVQEI 125


>ref|XP_002321572.2| hypothetical protein POPTR_0015s05030g [Populus trichocarpa]
           gi|550321966|gb|EEF05699.2| hypothetical protein
           POPTR_0015s05030g [Populus trichocarpa]
          Length = 1107

 Score = 56.6 bits (135), Expect = 5e-06
 Identities = 48/128 (37%), Positives = 61/128 (47%), Gaps = 17/128 (13%)
 Frame = +3

Query: 261 MSFRSNKDQRNRDGNRNNSRVPRQEWVPRGGSSSTAATDTLTNPPSSLN----------- 407
           MSF+   D+R+ + NR+ SR P Q+WVPRG +SS  A D  T PPSS N           
Sbjct: 1   MSFQPRNDRRDNNNNRS-SRFPTQKWVPRGANSS-PAVDANTKPPSSSNSRCNGNGGGGA 58

Query: 408 ----SDTA--CANRGGLVDDRNRGNFTRRSYVLRYSNSRKEGEREMNSDRSATTVARDLN 569
               S TA    N+GG+  +  RG   R     R    R E  RE+N          D N
Sbjct: 59  AHGWSGTAHHRYNKGGMAVNAPRGLVGRP----RKGIERSEKTRELN----------DPN 104

Query: 570 VPQLVQEI 593
           +PQL Q+I
Sbjct: 105 LPQLAQDI 112


>ref|XP_007031673.1| NF-X-like 1 isoform 1 [Theobroma cacao]
           gi|590646624|ref|XP_007031674.1| NF-X-like 1 isoform 1
           [Theobroma cacao] gi|590646628|ref|XP_007031675.1|
           NF-X-like 1 isoform 1 [Theobroma cacao]
           gi|590646631|ref|XP_007031676.1| NF-X-like 1 isoform 1
           [Theobroma cacao] gi|508710702|gb|EOY02599.1| NF-X-like
           1 isoform 1 [Theobroma cacao]
           gi|508710703|gb|EOY02600.1| NF-X-like 1 isoform 1
           [Theobroma cacao] gi|508710704|gb|EOY02601.1| NF-X-like
           1 isoform 1 [Theobroma cacao]
           gi|508710705|gb|EOY02602.1| NF-X-like 1 isoform 1
           [Theobroma cacao]
          Length = 1087

 Score = 56.6 bits (135), Expect = 5e-06
 Identities = 40/111 (36%), Positives = 57/111 (51%)
 Frame = +3

Query: 261 MSFRSNKDQRNRDGNRNNSRVPRQEWVPRGGSSSTAATDTLTNPPSSLNSDTACANRGGL 440
           MS       + R+  RN S+  RQEWVPRG SS+T  T  +++ P + NS     +    
Sbjct: 1   MSNSETMSFQGRNRPRNPSQSTRQEWVPRGSSSTT--TTVVSSSPGASNSTPIVNHTSTR 58

Query: 441 VDDRNRGNFTRRSYVLRYSNSRKEGEREMNSDRSATTVARDLNVPQLVQEI 593
            D+RNR        + R +N R++ E+E  S+        D N+PQLVQEI
Sbjct: 59  NDNRNR-------QIGRSTNHRRDKEKE-RSENHVVVKEIDPNLPQLVQEI 101


>ref|XP_002279249.2| PREDICTED: NF-X1-type zinc finger protein NFXL1-like [Vitis
           vinifera]
          Length = 1850

 Score = 56.2 bits (134), Expect = 7e-06
 Identities = 46/129 (35%), Positives = 62/129 (48%), Gaps = 18/129 (13%)
 Frame = +3

Query: 261 MSFRSNKDQRNRDGNRNNSRVPRQEWVPRGGSSSTAATDTLTNPPSSLNSDTACANRGGL 440
           MSF++  D+R+R   R  ++  RQ WVPRG  S+  A ++  NP S  NS     N  G+
Sbjct: 1   MSFQARNDRRDRA--RFPNQTGRQAWVPRG--SAPHAVNSHPNPSSGFNS-----NLNGI 51

Query: 441 VDDRN----------RGNFTRRSYVLRYSNSRKE--------GEREMNSDRSATTVARDL 566
             D N          RG F  R+Y  R SN R+E        G +++NS           
Sbjct: 52  GGDSNFSSAPPDGPSRGGFASRNYAARPSNQRRERVDDQEVKGPKDLNS----------- 100

Query: 567 NVPQLVQEI 593
           N+PQLVQEI
Sbjct: 101 NLPQLVQEI 109


>emb|CAN70583.1| hypothetical protein VITISV_024983 [Vitis vinifera]
          Length = 1025

 Score = 56.2 bits (134), Expect = 7e-06
 Identities = 46/129 (35%), Positives = 62/129 (48%), Gaps = 18/129 (13%)
 Frame = +3

Query: 261 MSFRSNKDQRNRDGNRNNSRVPRQEWVPRGGSSSTAATDTLTNPPSSLNSDTACANRGGL 440
           MSF++  D+R+R   R  ++  RQ WVPRG  S+  A ++  NP S  NS     N  G+
Sbjct: 1   MSFQTRNDRRDRA--RFPNQTGRQAWVPRG--SAPHAVNSHPNPSSGFNS-----NLNGI 51

Query: 441 VDDRN----------RGNFTRRSYVLRYSNSRKE--------GEREMNSDRSATTVARDL 566
             D N          RG F  R+Y  R SN R+E        G +++NS           
Sbjct: 52  GGDSNFSSAPPDGPSRGGFASRNYAARPSNQRRERVDDQEVKGPKDLNS----------- 100

Query: 567 NVPQLVQEI 593
           N+PQLVQEI
Sbjct: 101 NLPQLVQEI 109


Top