BLASTX nr result

ID: Sinomenium22_contig00039129 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium22_contig00039129
         (321 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263673.2| PREDICTED: putative pentatricopeptide repeat...    64   2e-08
emb|CBI36364.3| unnamed protein product [Vitis vinifera]               64   2e-08

>ref|XP_002263673.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g09950-like [Vitis vinifera]
          Length = 1088

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 36/93 (38%), Positives = 57/93 (61%), Gaps = 7/93 (7%)
 Frame = -3

Query: 259 FNCPFNDINGHCNRYYFSLPRKPKFRSFSVSL---SSIIEIKSHGQTAPNHLAIPSK--- 98
           F    N  N H +R++F LP  P  +SFS      ++ I++K +G  +P   +I +K   
Sbjct: 9   FQPSLNHFNCHYSRHFFLLPN-PNSKSFSAHFGHTTTTIKLKFNGPDSPKPTSIHTKPAS 67

Query: 97  -VHPSAYSSLLQECINSGSFELGKSMHAQMVAD 2
            V+P  YSSL+Q+CI+S SF+ GKS+H QM+++
Sbjct: 68  DVNPLPYSSLIQDCIDSNSFQRGKSIHTQMISN 100


>emb|CBI36364.3| unnamed protein product [Vitis vinifera]
          Length = 832

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 36/93 (38%), Positives = 57/93 (61%), Gaps = 7/93 (7%)
 Frame = -3

Query: 259 FNCPFNDINGHCNRYYFSLPRKPKFRSFSVSL---SSIIEIKSHGQTAPNHLAIPSK--- 98
           F    N  N H +R++F LP  P  +SFS      ++ I++K +G  +P   +I +K   
Sbjct: 9   FQPSLNHFNCHYSRHFFLLPN-PNSKSFSAHFGHTTTTIKLKFNGPDSPKPTSIHTKPAS 67

Query: 97  -VHPSAYSSLLQECINSGSFELGKSMHAQMVAD 2
            V+P  YSSL+Q+CI+S SF+ GKS+H QM+++
Sbjct: 68  DVNPLPYSSLIQDCIDSNSFQRGKSIHTQMISN 100


Top