BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium22_contig00039000
         (594 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI33530.3| unnamed protein product [Vitis vinifera]              165   1e-38
ref|XP_006849938.1| hypothetical protein AMTR_s00022p00127120 [A...   112   6e-23
emb|CBI27939.3| unnamed protein product [Vitis vinifera]              101   1e-19
gb|AEB39778.1| pentatricopeptide repeat protein 77 [Funaria hygr...    94   4e-17
ref|XP_006366808.1| PREDICTED: pentatricopeptide repeat-containi...    92   8e-17
ref|XP_006367240.1| PREDICTED: pentatricopeptide repeat-containi...    91   2e-16
ref|XP_006352817.1| PREDICTED: pentatricopeptide repeat-containi...    91   2e-16
ref|XP_007019278.1| Tetratricopeptide repeat (TPR)-like superfam...    91   2e-16
ref|XP_006467236.1| PREDICTED: pentatricopeptide repeat-containi...    91   3e-16
ref|XP_002867196.1| pentatricopeptide repeat-containing protein ...    91   3e-16
ref|XP_004242310.1| PREDICTED: pentatricopeptide repeat-containi...    90   4e-16
ref|XP_006449978.1| hypothetical protein CICLE_v100176691mg, par...    90   5e-16
ref|XP_004502560.1| PREDICTED: pentatricopeptide repeat-containi...    90   5e-16
ref|XP_006285430.1| hypothetical protein CARUB_v10006847mg [Caps...    90   5e-16
ref|XP_004242544.1| PREDICTED: pentatricopeptide repeat-containi...    90   5e-16
ref|XP_004170671.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...    90   5e-16
ref|XP_004139511.1| PREDICTED: pentatricopeptide repeat-containi...    90   5e-16
gb|ABR17838.1| unknown [Picea sitchensis]                              90   5e-16
ref|XP_007217844.1| hypothetical protein PRUPE_ppa024283mg [Prun...    89   9e-16
ref|XP_002525227.1| pentatricopeptide repeat-containing protein,...    89   9e-16

>emb|CBI33530.3| unnamed protein product [Vitis vinifera]
          Length = 614

 Score =  165 bits (417), Expect = 1e-38
 Identities = 94/233 (40%), Positives = 130/233 (55%), Gaps = 41/233 (17%)
 Frame = -3

Query: 577 NSIDLYRFSHVLQDSITSRDLPTAMAVHTHFIKLAPNGSISLWNQILNFYCQCRRIQHAR 398
           +S   ++FS +LQ+   + DL T M+VHT+ +KL  NG I +WN++L+ Y +   I HA 
Sbjct: 55  HSFKFHQFSQILQECTDAGDLRTGMSVHTYLVKLNINGFILIWNKLLSLYLKFGHIHHAH 114

Query: 397 KLFESMPERDVVSFNTIISTYSRLRLEIVECTELFSRMQAEGVKPNHITLSALIGAASVG 218
           +LF++MP RDVVSFNT+IS   R   + ++   L+S+M+ E VKPNHIT + LIGA   G
Sbjct: 115 QLFDTMPRRDVVSFNTMISASVRNNYDALDLVGLYSKMKKEDVKPNHITFAGLIGACD-G 173

Query: 217 LSASHLVELMHAQAVQYGLSSNEFVGSALVD----------------------------- 125
           L A  L  + HA  V+ GLSSNEFVGS+LVD                             
Sbjct: 174 LIALRLRGIFHAHTVRCGLSSNEFVGSSLVDGYAKQMKLEDAIKAFNEIMELDLVSWNIM 233

Query: 124 ------------ASNVFSRMRRKGLPLNSFTLASMTKTCSEPSDLNRGMQLHG 2
                       A  +FS+M +  + ++ FTL S+ KTCS+P DL  GMQ HG
Sbjct: 234 IDGCARNNSKEHAVRMFSQMLKGNVRVDGFTLTSIIKTCSKPGDLKHGMQFHG 286


>ref|XP_006849938.1| hypothetical protein AMTR_s00022p00127120 [Amborella trichopoda]
           gi|548853536|gb|ERN11519.1| hypothetical protein
           AMTR_s00022p00127120 [Amborella trichopoda]
          Length = 619

 Score =  112 bits (281), Expect = 6e-23
 Identities = 78/231 (33%), Positives = 115/231 (49%), Gaps = 41/231 (17%)
 Frame = -3

Query: 571 IDLYRFSHVLQDSITSRDLPTAMAVHTHFIKLAPNGSISLWNQILNFYCQCRRIQHARKL 392
           I+  R S  LQ   + R+L   +A H+H IK+     ISLWN++ N Y QC  + +A ++
Sbjct: 27  IESNRLSESLQACTSERNLRRGLAHHSHMIKVVSISCISLWNKLNNMYSQCGHLNYASRV 86

Query: 391 FESMPERDVVSFNTIISTYSRLRLEIVECTELFSRMQAEGVKPNHITLSALIGAASVGLS 212
           FE+M ERD +SFNTIIS Y   R        ++S M+  G+ PN ITL+ L  A +  LS
Sbjct: 87  FENMLERDTISFNTIISAYLNHRFH-NRVFSMYSMMKEAGLIPNSITLTLLFKACN-SLS 144

Query: 211 ASHLVELMHAQAVQYGLSSNEFVGSALVD------------------------------- 125
           + + +  +H +A++ GL+S+ FVGS+L+D                               
Sbjct: 145 SVNPLTQIHVEALKRGLNSDGFVGSSLIDGYSKLREIGEARQAFADISKVDLVSWNVMIN 204

Query: 124 ----------ASNVFSRMRRKGLPLNSFTLASMTKTCSEPSDLNRGMQLHG 2
                     A   FS+MRR+GL  + FTL S+    S   ++  G QLHG
Sbjct: 205 AYIENSCDEEAIETFSQMRREGLKPDGFTLTSILGAFSGGHEV--GDQLHG 253



 Score = 62.8 bits (151), Expect = 7e-08
 Identities = 40/140 (28%), Positives = 66/140 (47%)
 Frame = -3

Query: 517 LPTAMAVHTHFIKLAPNGSISLWNQILNFYCQCRRIQHARKLFESMPERDVVSFNTIIST 338
           L  +  VH   +KL     + + N +++ Y +C  +  A  LF+++  RDVVSF  +I  
Sbjct: 346 LQQSQQVHARILKLGFVSDVLVANALIDSYSKCGSLLEAHLLFQTLNYRDVVSFTVMIGA 405

Query: 337 YSRLRLEIVECTELFSRMQAEGVKPNHITLSALIGAASVGLSASHLVELMHAQAVQYGLS 158
           +S+   +  E   LF RM+ EG++P+ IT   L+ A S G      + +       YG+ 
Sbjct: 406 FSQ-HGKSKEALSLFKRMEREGMRPDEITFLGLLSACSHGGLVKEGLMVFKTMTDFYGIR 464

Query: 157 SNEFVGSALVDASNVFSRMR 98
                 S +VD      R+R
Sbjct: 465 PRTEHHSCVVDMLGRAGRLR 484



 Score = 61.2 bits (147), Expect = 2e-07
 Identities = 51/206 (24%), Positives = 93/206 (45%), Gaps = 41/206 (19%)
 Frame = -3

Query: 499 VHTHFIKLAPNGSISLWNQILNFYCQCRRIQHARKLFESMPERDVVSFNTIISTYSRLRL 320
           +H   +K   N    + + +++ Y + R I  AR+ F  + + D+VS+N +I+ Y     
Sbjct: 152 IHVEALKRGLNSDGFVGSSLIDGYSKLREIGEARQAFADISKVDLVSWNVMINAYIENSC 211

Query: 319 EIVECTELFSRMQAEGVKPNHITLSALIGAASVGLSASHLVELMHAQAVQYGLSSNEFVG 140
           +  E  E FS+M+ EG+KP+  TL++++GA S G     + + +H   ++ GL+    V 
Sbjct: 212 D-EEAIETFSQMRREGLKPDGFTLTSILGAFSGG---HEVGDQLHGCLIKEGLAFKTPVV 267

Query: 139 SALV----------DASNVFSR-------------------------------MRRKGLP 83
           +AL+           +S +F+R                               M+R+G+ 
Sbjct: 268 NALLTMYSKSKKMGSSSKLFARMQAPNLISWTAMIAGFAQNDLNHEAVRFYQGMQREGMR 327

Query: 82  LNSFTLASMTKTCSEPSDLNRGMQLH 5
            N FTLAS+       + L +  Q+H
Sbjct: 328 ENQFTLASVLPAYGGLATLQQSQQVH 353


>emb|CBI27939.3| unnamed protein product [Vitis vinifera]
          Length = 764

 Score =  101 bits (252), Expect = 1e-19
 Identities = 74/235 (31%), Positives = 109/235 (46%), Gaps = 47/235 (20%)
 Frame = -3

Query: 568 DLYRFSHVLQDSITSRDLPTAMAVHTHFIKLAPNGSISLWNQILNFYCQCRRIQHARKLF 389
           ++Y F  +L+   +  DL    A+H   IK   N    LWN ++N Y +C    +A K+F
Sbjct: 190 NMYTFISILKTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVF 249

Query: 388 ESMPERDVVSFNTIISTY------SRLRLEIVECTELFSRMQAEGVKPNHITLSALIGAA 227
             +PERDVVS+  +I+ +      S LR        +F++M AEG  PN  T  +++ + 
Sbjct: 250 GEIPERDVVSWTALITGFVAEGYGSGLR--------IFNQMLAEGFNPNMYTFISILRSC 301

Query: 226 SVGLSASHLVELMHAQAVQYGLSSNEFVGSALV----------DASNVFSR--------- 104
           S  LS   L + +HAQ V+  L  N+FVG+ALV          DA  +F+R         
Sbjct: 302 S-SLSDVDLGKQVHAQIVKNSLDGNDFVGTALVDMYAKNRFLEDAETIFNRLIKRDLFAW 360

Query: 103 ----------------------MRRKGLPLNSFTLASMTKTCSEPSDLNRGMQLH 5
                                 M+R+G+  N FTLAS    CS  + L+ G QLH
Sbjct: 361 TVIVAGYAQDGQGEKAVKCFIQMQREGVKPNEFTLASSLSGCSRIATLDSGRQLH 415



 Score = 68.2 bits (165), Expect = 2e-09
 Identities = 47/192 (24%), Positives = 81/192 (42%), Gaps = 41/192 (21%)
 Frame = -3

Query: 454 LWNQILNFYCQCRRIQHARKLFESMPERDVVSFNTIISTYSRLRLEIVECTELFSRMQAE 275
           LW+ ++N Y +C  +Q AR++ E MP +DV  +N  +S+ +     + E  +LF  M+  
Sbjct: 26  LWSSLVNVYVKCESLQCARQVLEEMPIQDVQQWNQKLSS-ANSPYPLQEAVQLFYLMRHT 84

Query: 274 GVKPNHITLSALIGAASVGLSASHLVELMHAQAVQYGLSSNEFVGSALV----------- 128
            ++ N    ++LI AA+  L  +H  E +HA   +YG  S+  + +A V           
Sbjct: 85  RIRLNQFIFASLISAAA-SLGDNHYGESIHACVCKYGFESDILISNAFVTMYMKTQSVEN 143

Query: 127 ------------------------------DASNVFSRMRRKGLPLNSFTLASMTKTCSE 38
                                             +  ++  +G   N +T  S+ KTC+ 
Sbjct: 144 GWQFFKAMMIENLASRNNLLSGFCDTETCDQGPRILIQLLVEGFEPNMYTFISILKTCAS 203

Query: 37  PSDLNRGMQLHG 2
             DLN G  +HG
Sbjct: 204 KGDLNEGKAIHG 215



 Score = 67.8 bits (164), Expect = 2e-09
 Identities = 44/151 (29%), Positives = 82/151 (54%), Gaps = 3/151 (1%)
 Frame = -3

Query: 568 DLYRFSHVLQDSITSRDLPTAMAVHTHFIKLAPNGSISLWNQILNFYCQCRRIQHARKLF 389
           ++Y F  +L+   +  D+     VH   +K + +G+  +   +++ Y + R ++ A  +F
Sbjct: 290 NMYTFISILRSCSSLSDVDLGKQVHAQIVKNSLDGNDFVGTALVDMYAKNRFLEDAETIF 349

Query: 388 ESMPERDVVSFNTIISTYSR--LRLEIVECTELFSRMQAEGVKPNHITL-SALIGAASVG 218
             + +RD+ ++  I++ Y++     + V+C   F +MQ EGVKPN  TL S+L G + + 
Sbjct: 350 NRLIKRDLFAWTVIVAGYAQDGQGEKAVKC---FIQMQREGVKPNEFTLASSLSGCSRIA 406

Query: 217 LSASHLVELMHAQAVQYGLSSNEFVGSALVD 125
              S     +H+ A++ G S + FV SALVD
Sbjct: 407 TLDSG--RQLHSMAIKAGQSGDMFVASALVD 435


>gb|AEB39778.1| pentatricopeptide repeat protein 77 [Funaria hygrometrica]
          Length = 1161

 Score = 93.6 bits (231), Expect = 4e-17
 Identities = 61/222 (27%), Positives = 106/222 (47%), Gaps = 41/222 (18%)
 Frame = -3

Query: 547  VLQDSITSRDLPTAMAVHTHFIKLAPNGSISLWNQILNFYCQCRRIQHARKLFESMPERD 368
            VL    TS+ L     +H+H  ++  +  + + N +++ Y +C  +  AR+LF +MP+RD
Sbjct: 391  VLNACSTSKALGAGELIHSHISEVGHSSDVQIGNSLISMYARCGDLPRARELFNTMPKRD 450

Query: 367  VVSFNTIISTYSRLRLEIVECTELFSRMQAEGVKPNHITLSALIGAASVGLSASHLVELM 188
            ++S+N II+ Y+R R +  E  +L+ +MQ+EGVKP  +T   L+ A +   SA    +++
Sbjct: 451  LISWNAIIAGYAR-REDRGEAMKLYKQMQSEGVKPGRVTFLHLLSACT-NSSAYSDGKMI 508

Query: 187  HAQAVQYGLSSNEFVGSAL----------VDASNVFS----------------------- 107
            H   ++ G+ SN  + +AL          ++A NVF                        
Sbjct: 509  HEDILRSGIKSNGHLANALMNMYRRCGSIMEAQNVFEGTRARDIISWNSMIAGHAQHGSY 568

Query: 106  --------RMRRKGLPLNSFTLASMTKTCSEPSDLNRGMQLH 5
                     M+++GL  +  T AS+   C  P  L  G Q+H
Sbjct: 569  EAAYKLFLEMKKEGLEPDKITFASVLVGCKNPEALELGRQIH 610



 Score = 69.3 bits (168), Expect = 8e-10
 Identities = 54/222 (24%), Positives = 93/222 (41%), Gaps = 41/222 (18%)
 Frame = -3

Query: 547 VLQDSITSRDLPTAMAVHTHFIKLAPNGSISLWNQILNFYCQCRRIQHARKLFESMPERD 368
           +L    +  +L     +H+  I+        + N +LN Y +C  +  AR++F  +  RD
Sbjct: 189 ILTACCSPAELEYGKKIHSKIIEAGYQRDPRVQNSLLNMYGKCEDLPSARQVFSGIYRRD 248

Query: 367 VVSFNTIISTYSRLRLEIVECTELFSRMQAEGVKPNHITLSALIGAASVGLSASHLVELM 188
           VVS+NT++  Y++ +  + EC  LF +M +EG+ P+ +T   L+ A +   S     + +
Sbjct: 249 VVSYNTMLGLYAQ-KAYVEECIGLFGQMSSEGIPPDKVTYINLLDAFTTP-SMLDEGKRI 306

Query: 187 HAQAVQYGLSSNEFVGSALV---------------------------------------- 128
           H  AV  GL+S+  VG+AL                                         
Sbjct: 307 HKLAVNEGLNSDIRVGTALATMFVRCGDVAGAKQALEAFADRDVVVYNALIAALAQHGHY 366

Query: 127 -DASNVFSRMRRKGLPLNSFTLASMTKTCSEPSDLNRGMQLH 5
            +A   + +MR  G+ +N  T  S+   CS    L  G  +H
Sbjct: 367 EEAFEQYYQMRSDGVVMNRTTYLSVLNACSTSKALGAGELIH 408



 Score = 67.0 bits (162), Expect = 4e-09
 Identities = 47/222 (21%), Positives = 95/222 (42%), Gaps = 41/222 (18%)
 Frame = -3

Query: 547 VLQDSITSRDLPTAMAVHTHFIKLAPNGSISLWNQILNFYCQCRRIQHARKLFESMPERD 368
           ++Q+    R L  A  +H   ++      I L N ++N Y +CR +  A ++F  MP RD
Sbjct: 88  LVQNCTRKRSLAEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVSDAHQVFLKMPRRD 147

Query: 367 VVSFNTIISTYSRLRLEIVECTELFSRMQAEGVKPNHITLSALIGAASVGLSASHLVELM 188
           V+S+N++IS Y++   +  +  +LF  MQ  G  P+ IT  +++ A        +  + +
Sbjct: 148 VISWNSLISCYAQQGFK-KKAFQLFEEMQTAGFIPSKITYISILTACCSPAELEY-GKKI 205

Query: 187 HAQAVQYGLSSNEFVGSALV---------------------------------------- 128
           H++ ++ G   +  V ++L+                                        
Sbjct: 206 HSKIIEAGYQRDPRVQNSLLNMYGKCEDLPSARQVFSGIYRRDVVSYNTMLGLYAQKAYV 265

Query: 127 -DASNVFSRMRRKGLPLNSFTLASMTKTCSEPSDLNRGMQLH 5
            +   +F +M  +G+P +  T  ++    + PS L+ G ++H
Sbjct: 266 EECIGLFGQMSSEGIPPDKVTYINLLDAFTTPSMLDEGKRIH 307



 Score = 59.3 bits (142), Expect = 8e-07
 Identities = 43/168 (25%), Positives = 79/168 (47%), Gaps = 11/168 (6%)
 Frame = -3

Query: 556 FSHVLQDSITSRDLPTAMAVHTHFIKLAPNGSISLWNQILNFYCQCRRIQHARKLFESMP 377
           F H+L     S        +H   ++     +  L N ++N Y +C  I  A+ +FE   
Sbjct: 489 FLHLLSACTNSSAYSDGKMIHEDILRSGIKSNGHLANALMNMYRRCGSIMEAQNVFEGTR 548

Query: 376 ERDVVSFNTIISTYSRLRLEIVECTELFSRMQAEGVKPNHITL-SALIGAASVGLSASHL 200
            RD++S+N++I+ +++         +LF  M+ EG++P+ IT  S L+G  +    A  L
Sbjct: 549 ARDIISWNSMIAGHAQ-HGSYEAAYKLFLEMKKEGLEPDKITFASVLVGCKNP--EALEL 605

Query: 199 VELMHAQAVQYGLSSNEFVGSALV----------DASNVFSRMRRKGL 86
              +H   ++ GL  +  +G+AL+          DA  VF  +R + +
Sbjct: 606 GRQIHMLIIESGLQLDVNLGNALINMYIRCGSLQDAYEVFHSLRHRNV 653



 Score = 56.2 bits (134), Expect = 7e-06
 Identities = 30/138 (21%), Positives = 70/138 (50%)
 Frame = -3

Query: 571  IDLYRFSHVLQDSITSRDLPTAMAVHTHFIKLAPNGSISLWNQILNFYCQCRRIQHARKL 392
            ++ + F  +L    +   L     VH   +K    G + +   +++ Y +C  ++ A+++
Sbjct: 787  LNKFSFVSILNACSSFSALEEGKRVHAEIVKRKMQGDVRVGAALISMYAKCGSLEEAQEV 846

Query: 391  FESMPERDVVSFNTIISTYSRLRLEIVECTELFSRMQAEGVKPNHITLSALIGAASVGLS 212
            F++  E++VV++N +I+ Y++  L   +  + F+ M  EG+KP+  T ++++ A +    
Sbjct: 847  FDNFTEKNVVTWNAMINAYAQHGLAS-KALDFFNCMDKEGIKPDGSTFTSILSACNHSGL 905

Query: 211  ASHLVELMHAQAVQYGLS 158
                  +  +   Q+GLS
Sbjct: 906  VMEGNRIFSSLESQHGLS 923



 Score = 55.8 bits (133), Expect = 9e-06
 Identities = 38/143 (26%), Positives = 73/143 (51%)
 Frame = -3

Query: 556  FSHVLQDSITSRDLPTAMAVHTHFIKLAPNGSISLWNQILNFYCQCRRIQHARKLFESMP 377
            FS +L+  ++S  L     V  H +         + N +++ Y +   +  ARK+F+ MP
Sbjct: 691  FSSILKACMSSACLDEGKKVIAHILNSGYELDTGVGNALISAYSKSGSMTDARKVFDKMP 750

Query: 376  ERDVVSFNTIISTYSRLRLEIVECTELFSRMQAEGVKPNHITLSALIGAASVGLSASHLV 197
             RD++S+N +I+ Y++  L      +   +MQ +GV  N  +  +++ A S   SA    
Sbjct: 751  NRDIMSWNKMIAGYAQNGLG-GTALQFAYQMQEQGVVLNKFSFVSILNACS-SFSALEEG 808

Query: 196  ELMHAQAVQYGLSSNEFVGSALV 128
            + +HA+ V+  +  +  VG+AL+
Sbjct: 809  KRVHAEIVKRKMQGDVRVGAALI 831


>ref|XP_006366808.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g02330-like [Solanum tuberosum]
          Length = 894

 Score = 92.4 bits (228), Expect = 8e-17
 Identities = 50/155 (32%), Positives = 87/155 (56%)
 Frame = -3

Query: 589 IKTQNSIDLYRFSHVLQDSITSRDLPTAMAVHTHFIKLAPNGSISLWNQILNFYCQCRRI 410
           +K++   D + +  VL+     +D  T M +H   IK        + + +++ YC+C ++
Sbjct: 475 LKSRMEPDEFTYGSVLKACAARQDFNTGMVIHNRIIKSGMGLECFIGSAVIDMYCKCEKV 534

Query: 409 QHARKLFESMPERDVVSFNTIISTYSRLRLEIVECTELFSRMQAEGVKPNHITLSALIGA 230
           + A KL E M E+ +VS+N IIS +S LR +  E  + FSRM  EG+KP++ T + ++  
Sbjct: 535 EEAEKLHERMKEQTIVSWNAIISGFS-LREQSEEAQKFFSRMLEEGIKPDNFTFATVLDT 593

Query: 229 ASVGLSASHLVELMHAQAVQYGLSSNEFVGSALVD 125
            +  L+   L + +HAQ ++  L S+ F+ S LVD
Sbjct: 594 CA-NLATVGLGKQIHAQIIKQELQSDVFITSTLVD 627



 Score = 67.0 bits (162), Expect = 4e-09
 Identities = 51/203 (25%), Positives = 92/203 (45%), Gaps = 41/203 (20%)
 Frame = -3

Query: 487 FIKLAPNGSISLWNQILNFYCQCRRIQHARKLFESMPERDVVSFNTIISTYSRLRLEIVE 308
           F K+    ++S WN ++  Y     ++ A+ +F+ MPERD +S+N++IS Y +      +
Sbjct: 106 FDKMPLRDTVS-WNAMIFGYSMVSELEKAQLMFDLMPERDAISWNSLISGYMQ-NGNYGK 163

Query: 307 CTELFSRMQAEGVKPNHITLSALIGAASVGLSASHLVELMHAQAVQYGLSSNEFVGSALV 128
             + F  M  +G+  +  T + ++ A S G+  S L   +H   V+ GL+++   GSA+V
Sbjct: 164 SIQTFLEMGRDGIAFDRTTFAVILKACS-GIEDSWLGVQVHGLVVKLGLATDVVTGSAMV 222

Query: 127 D-----------------------------------------ASNVFSRMRRKGLPLNSF 71
           D                                           ++F  M++ G+ ++  
Sbjct: 223 DMYSKCKRLNESICFFNEMPEKNWVSWSALIAGCVQNNKFANGLHLFKNMQKGGVGVSQS 282

Query: 70  TLASMTKTCSEPSDLNRGMQLHG 2
           T AS+ ++C+  SDL  G QLHG
Sbjct: 283 TYASVFRSCAGLSDLKLGSQLHG 305



 Score = 63.2 bits (152), Expect = 5e-08
 Identities = 40/149 (26%), Positives = 74/149 (49%), Gaps = 1/149 (0%)
 Frame = -3

Query: 568  DLYRFSHVLQDSITSRDLPTAMAVHTHFIKLAPNGSISLWNQILNFYCQCRRIQHARKLF 389
            D + F+ VL        +     +H   IK      + + + +++ Y +C  +Q +R +F
Sbjct: 583  DNFTFATVLDTCANLATVGLGKQIHAQIIKQELQSDVFITSTLVDMYSKCGNMQDSRLMF 642

Query: 388  ESMPERDVVSFNTIISTYSRLRLEIVECTELFSRMQAEGVKPNHITLSALIGA-ASVGLS 212
            E  P++D V++N ++  Y++  L   E  ++F +MQ E V+PNH    A++ A A +GL 
Sbjct: 643  EKAPKKDFVTWNALVCGYAQHGLG-EEALQIFEKMQLEDVRPNHAAFLAVLRACAHIGLV 701

Query: 211  ASHLVELMHAQAVQYGLSSNEFVGSALVD 125
               L +  ++ +  YGL       S +VD
Sbjct: 702  EIGL-QHFNSMSNNYGLDPQLEHYSCMVD 729


>ref|XP_006367240.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g04780-like [Solanum tuberosum]
          Length = 622

 Score = 90.9 bits (224), Expect = 2e-16
 Identities = 65/235 (27%), Positives = 107/235 (45%), Gaps = 41/235 (17%)
 Frame = -3

Query: 586 KTQNSIDLYRFSHVLQDSITSRDLPTAMAVHTHFIKLAPNGSISLWNQILNFYCQCRRIQ 407
           +++NSI L      +Q+    R+  T  ++HT  IK      I   N ++N Y +C  + 
Sbjct: 41  ESKNSIILPYLHRAVQECAKQRNAMTGKSMHTQIIKYGYEVDILTTNMLINMYSKCGIVD 100

Query: 406 HARKLFESMPERDVVSFNTIISTYSRLRLEIVECTELFSRMQAEGVKPNHITLSALIGAA 227
            ARK+F+ MP+R +VS+NT++ +Y + R E  E   LF RMQ EG + N  T+S ++ A 
Sbjct: 101 FARKVFDEMPQRTLVSWNTLMGSYIQNRDE-DEALRLFVRMQREGSQVNGFTVSGVLCAC 159

Query: 226 SVGLSASHLVELMHAQAVQYGLSSNEFVGSALVD-------------------------- 125
           +   +     +L H  A++  + SN FV +AL+D                          
Sbjct: 160 AAKFAVLESKQL-HGFAIKVSVESNVFVSTALLDVYAKCGLMKDAFRVFDSMNERNEVTW 218

Query: 124 ---------------ASNVFSRMRRKGLPLNSFTLASMTKTCSEPSDLNRGMQLH 5
                          A   F R+++ G+  N FTL+S+   C+  + L  G + H
Sbjct: 219 SSMVAGYVQNELYEEAIMFFHRLQKFGVEHNQFTLSSVISACAAMAALLEGNETH 273



 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 37/125 (29%), Positives = 71/125 (56%)
 Frame = -3

Query: 499 VHTHFIKLAPNGSISLWNQILNFYCQCRRIQHARKLFESMPERDVVSFNTIISTYSRLRL 320
           +H   IK++   ++ +   +L+ Y +C  ++ A ++F+SM ER+ V+++++++ Y +  L
Sbjct: 171 LHGFAIKVSVESNVFVSTALLDVYAKCGLMKDAFRVFDSMNERNEVTWSSMVAGYVQNEL 230

Query: 319 EIVECTELFSRMQAEGVKPNHITLSALIGAASVGLSASHLVELMHAQAVQYGLSSNEFVG 140
              E    F R+Q  GV+ N  TLS++I A +  ++A       HA   + G  +N +V 
Sbjct: 231 -YEEAIMFFHRLQKFGVEHNQFTLSSVISACA-AMAALLEGNETHAIVWKTGFGANVYVA 288

Query: 139 SALVD 125
           S+LVD
Sbjct: 289 SSLVD 293


>ref|XP_006352817.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20770-like [Solanum tuberosum]
          Length = 765

 Score = 90.9 bits (224), Expect = 2e-16
 Identities = 65/227 (28%), Positives = 110/227 (48%), Gaps = 41/227 (18%)
 Frame = -3

Query: 574 SIDLYRFSHVLQDSITSRDLPTAMAVHTHFIKLAPNGSISLWNQILNFYCQCRRIQHARK 395
           S D +  + +++    S  + TA   H     L PN  I  W+ +L  YC+  ++ +A +
Sbjct: 39  SADTFLLNRLIELYSKSGHIHTAR--HLFDQMLQPN--IYSWHSLLTAYCKQGQLDNAHE 94

Query: 394 LFESMPERDVVSFNTIISTYSRLRLEIVECTELFSRMQAEGVKPNHITLSALIGAASVGL 215
           LF  MPER+ VS+NT+IS ++R R E  +  E++S+M A G  P HIT ++++ A   GL
Sbjct: 95  LFSIMPERNSVSWNTLISAFARNRHE-TKALEVYSQMNAHGFSPTHITFASVLSACG-GL 152

Query: 214 SASHLVELMHAQAVQYGLSSNEFVGSALV------------------------------- 128
           +      + HA AV+YGL  N +VG+AL+                               
Sbjct: 153 AELEYGRVSHASAVKYGLHKNVYVGNALLSLYVKCSCPRDALIAFRELDEPNEVSFTAMM 212

Query: 127 ----------DASNVFSRMRRKGLPLNSFTLASMTKTCSEPSDLNRG 17
                     +A  +F  ++R G+ ++S +L+S+ + C++   LN G
Sbjct: 213 CGLVDNHQVEEAFEMFRLIQRSGIRIDSVSLSSVLRGCAKRGGLNFG 259


>ref|XP_007019278.1| Tetratricopeptide repeat (TPR)-like superfamily protein, putative
           [Theobroma cacao] gi|508724606|gb|EOY16503.1|
           Tetratricopeptide repeat (TPR)-like superfamily protein,
           putative [Theobroma cacao]
          Length = 731

 Score = 90.9 bits (224), Expect = 2e-16
 Identities = 64/226 (28%), Positives = 103/226 (45%), Gaps = 41/226 (18%)
 Frame = -3

Query: 556 FSHVLQDSITSRDLPTAMAVHTHFIKLAPNGSISLWNQILNFYCQCRRIQHARKLFESMP 377
           ++H+         +  A  + +H +   P   + L N+ +  Y +C  +  AR+LF+ MP
Sbjct: 83  YAHLFHLCSAKDAIVEARKLESHLVTFCPLPPVFLLNRAIETYGKCGCLVDARELFDEMP 142

Query: 376 ERDVVSFNTIISTYSRLRLEIVECTELFSRMQAEGVKPNHITLSALIGAASVGLSASHLV 197
           ERD  S+NT+I+ Y+R   +  +   LFS M  EG+ PN IT ++++G+  V L    L 
Sbjct: 143 ERDGGSWNTMITAYARNGFQ-EKALCLFSEMNREGILPNEITFASVLGSCGVVLELG-LS 200

Query: 196 ELMHAQAVQYGLSSNEFVGSALVD------------------------------------ 125
             +HA  V+YG S+N  +GS+LVD                                    
Sbjct: 201 RQIHAMVVKYGYSNNVVLGSSLVDVYGKCGVISDARRIFDQIENPNDVSWNVIVRRYLEI 260

Query: 124 -----ASNVFSRMRRKGLPLNSFTLASMTKTCSEPSDLNRGMQLHG 2
                A ++F R+ R  +   +FT ++    CS  S L  GMQ+HG
Sbjct: 261 GDGKEAVSMFFRVFRGDVRPLNFTFSNALVACSSMSALKEGMQIHG 306



 Score = 66.6 bits (161), Expect = 5e-09
 Identities = 48/192 (25%), Positives = 83/192 (43%), Gaps = 42/192 (21%)
 Frame = -3

Query: 451 WNQILNFYCQCRRIQHARKLFESMPERDVVSFNTIISTYSRLRLEIVECTELFSRMQAEG 272
           W  I++ Y  C R + AR+LF  MPER+V+S+N +++ Y+ L  +  +  E    M+   
Sbjct: 351 WTAIMSGYAMCGRTREARELFNMMPERNVISWNAMLAGYTHL-FQWEDALEFVFLMRRMT 409

Query: 271 VKPNHITLSALIGAASVGLSASHLVELMHAQAVQYGLSSNEFVGSALVD----------- 125
            + +H+TL  ++   + G+S   + + +H    ++G  SN FVG+AL+D           
Sbjct: 410 KEIDHVTLVLVLNVCA-GISDVEMGKQVHGFIYRHGFCSNIFVGNALLDMYGKCGTLNSA 468

Query: 124 -------------------------------ASNVFSRMRRKGLPLNSFTLASMTKTCSE 38
                                          A   F+ M+ +  P   FT  ++   C+ 
Sbjct: 469 RVWFYQMSQERDTVSWNALLTSYARHHRSEQAMTFFNEMQWESRPC-KFTFGTLLAACAN 527

Query: 37  PSDLNRGMQLHG 2
              LN G Q+HG
Sbjct: 528 MFALNHGKQIHG 539


>ref|XP_006467236.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
           mitochondrial-like [Citrus sinensis]
          Length = 670

 Score = 90.5 bits (223), Expect = 3e-16
 Identities = 52/152 (34%), Positives = 84/152 (55%)
 Frame = -3

Query: 556 FSHVLQDSITSRDLPTAMAVHTHFIKLAPNGSISLWNQILNFYCQCRRIQHARKLFESMP 377
           ++ +L+     + L  A  VH H +  A    I++ N ILN Y +C  +  ARKLF+ MP
Sbjct: 99  YNTLLKKCTHLKKLKEARIVHAHILGSAFKNDIAMQNTILNAYAKCGCLDEARKLFDEMP 158

Query: 376 ERDVVSFNTIISTYSRLRLEIVECTELFSRMQAEGVKPNHITLSALIGAASVGLSASHLV 197
            +D+V++  +IS YS+   +      LFS+M   G+KPN  TLS+++ A+  G +     
Sbjct: 159 VKDMVTWTALISGYSQ-NDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFG 217

Query: 196 ELMHAQAVQYGLSSNEFVGSALVDASNVFSRM 101
             +HA  ++YG   N +VGS+L+D    F +M
Sbjct: 218 RQVHAFCLKYGYDWNVYVGSSLLDMYARFDQM 249


>ref|XP_002867196.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata] gi|297313032|gb|EFH43455.1|
            pentatricopeptide repeat-containing protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 997

 Score = 90.5 bits (223), Expect = 3e-16
 Identities = 62/235 (26%), Positives = 114/235 (48%), Gaps = 40/235 (17%)
 Frame = -3

Query: 589  IKTQNSIDLYRFSHVLQDSITSRDLPTAMAVHTHFIKLAPNGSISLWNQILNFYCQCRRI 410
            +++    D   F  VL  ++    L     VH   +KL  +  +++ N ++N YC+ R+I
Sbjct: 314  VESDLECDQVTFILVLATAVRLDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKI 373

Query: 409  QHARKLFESMPERDVVSFNTIISTYSRLRLEIVECTELFSRMQAEGVKPNHITLSALIGA 230
              AR +F +M ERD++S+N++I+  ++  LE VE   LF ++   G+KP+H T+++++ A
Sbjct: 374  GLARTVFNNMSERDLISWNSVIAGIAQSDLE-VEAVCLFMQLLRCGLKPDHYTMTSVLKA 432

Query: 229  ASVGLSASHLVELMHAQAVQYGLSSNEFVGSALVDASN---------------------- 116
            AS       L + +H  A++    ++ FV +AL+DA +                      
Sbjct: 433  ASSLPEGLSLSKQIHVHAIKTNNVADSFVSTALIDAYSRNRCMKEAEVLFGRNNFDLVAW 492

Query: 115  ------------------VFSRMRRKGLPLNSFTLASMTKTCSEPSDLNRGMQLH 5
                              +F+ M ++G   + FTLA++ KTC     +N+G Q+H
Sbjct: 493  NAMMSGYTQSHDGHKTLELFALMHKQGERSDDFTLATVLKTCGFLFAINQGKQVH 547



 Score = 75.5 bits (184), Expect = 1e-11
 Identities = 45/155 (29%), Positives = 86/155 (55%), Gaps = 6/155 (3%)
 Frame = -3

Query: 544 LQDSITSRDLPTAMAVHTHFIKLAPNGSISLWNQILNFYCQCRRIQHARKLFESMPERDV 365
           L+D+I++ DL      H   + L  N    L N +++ Y +C  + +AR++F+ MPERD+
Sbjct: 53  LRDAISTSDLMLGKCTHARILALEENPERFLVNNLISMYSKCGSLTYARRVFDKMPERDL 112

Query: 364 VSFNTIISTYSRLRLEIVECTE----LFSRMQAEGVKPNHITLSALIGAASVGLSASHLV 197
           VS+N+I++ Y++    +VE  +    LF  ++ + V  + +TLS ++    + L + ++ 
Sbjct: 113 VSWNSILAAYAQSSEGVVENVKEAFLLFRILRQDVVYTSRMTLSPML---KLCLHSGYVC 169

Query: 196 --ELMHAQAVQYGLSSNEFVGSALVDASNVFSRMR 98
             E  H  A + GL  ++FV  ALV+    F +++
Sbjct: 170 ASESFHGYACKIGLDGDDFVAGALVNIYLKFGKVK 204



 Score = 57.4 bits (137), Expect = 3e-06
 Identities = 40/125 (32%), Positives = 69/125 (55%)
 Frame = -3

Query: 499 VHTHFIKLAPNGSISLWNQILNFYCQCRRIQHARKLFESMPERDVVSFNTIISTYSRLRL 320
           VH + IK   +  + + + IL+ Y +C  +  A+  F+S+P  D V++ T+IS       
Sbjct: 546 VHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTLISGCIE-NG 604

Query: 319 EIVECTELFSRMQAEGVKPNHITLSALIGAASVGLSASHLVELMHAQAVQYGLSSNEFVG 140
           E      +FS+M+  GV P+  T++ L  A+S  L+A      +HA A++   +S+ FVG
Sbjct: 605 EEERALHVFSQMRLMGVLPDEFTIATLAKASSC-LTALEQGRQIHANALKLNCTSDPFVG 663

Query: 139 SALVD 125
           ++LVD
Sbjct: 664 TSLVD 668


>ref|XP_004242310.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20770-like [Solanum lycopersicum]
          Length = 765

 Score = 90.1 bits (222), Expect = 4e-16
 Identities = 63/227 (27%), Positives = 110/227 (48%), Gaps = 41/227 (18%)
 Frame = -3

Query: 574 SIDLYRFSHVLQDSITSRDLPTAMAVHTHFIKLAPNGSISLWNQILNFYCQCRRIQHARK 395
           S D +  + +++    S  + TA   H     L PN  +  W+ +L  YC+  ++ +A +
Sbjct: 39  SADTFLLNRLIELYSKSGHIHTAR--HLFDQMLEPN--VYSWHSLLTAYCKQGQLDNAHE 94

Query: 394 LFESMPERDVVSFNTIISTYSRLRLEIVECTELFSRMQAEGVKPNHITLSALIGAASVGL 215
           LF +MPER+ VS+NT+IS ++R   E  +  +++S+M A G  P HIT ++++ A   GL
Sbjct: 95  LFSNMPERNTVSWNTLISAFARNHHE-TKALKVYSQMNAHGFSPTHITFASVLSACG-GL 152

Query: 214 SASHLVELMHAQAVQYGLSSNEFVGSALV------------------------------- 128
           +      + HA AV+YGL  N +VG+AL+                               
Sbjct: 153 AELEYGRVSHASAVKYGLHKNVYVGNALLSLYVKCSCPRDALIAFRELDEPNEVSFTAMM 212

Query: 127 ----------DASNVFSRMRRKGLPLNSFTLASMTKTCSEPSDLNRG 17
                     +A  +F  ++R G+ ++S TL+S+ + C++   LN G
Sbjct: 213 CGLVDNHQVEEAFEMFRLIQRSGIRIDSVTLSSVLRGCAKRRGLNFG 259


>ref|XP_006449978.1| hypothetical protein CICLE_v100176691mg, partial [Citrus
           clementina] gi|557552589|gb|ESR63218.1| hypothetical
           protein CICLE_v100176691mg, partial [Citrus clementina]
          Length = 317

 Score = 89.7 bits (221), Expect = 5e-16
 Identities = 52/152 (34%), Positives = 84/152 (55%)
 Frame = -3

Query: 556 FSHVLQDSITSRDLPTAMAVHTHFIKLAPNGSISLWNQILNFYCQCRRIQHARKLFESMP 377
           ++ +L+     + L  A  VH H +  A    I++ N ILN Y +C  +  ARKLF+ MP
Sbjct: 69  YNTLLKKCTHLKKLKEARIVHAHILGSAFKHDIAMQNTILNAYAKCGCLDEARKLFDEMP 128

Query: 376 ERDVVSFNTIISTYSRLRLEIVECTELFSRMQAEGVKPNHITLSALIGAASVGLSASHLV 197
            +D+V++  +IS YS+   +      LFS+M   G+KPN  TLS+++ A+  G +     
Sbjct: 129 VKDMVTWTALISGYSQ-NDQPENAIILFSQMLRLGLKPNQFTLSSVLKASGAGATDDKFG 187

Query: 196 ELMHAQAVQYGLSSNEFVGSALVDASNVFSRM 101
             +HA  ++YG   N +VGS+L+D    F +M
Sbjct: 188 RQVHAFCLKYGYDWNVYVGSSLLDMYARFDQM 219


>ref|XP_004502560.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g26540-like [Cicer arietinum]
          Length = 682

 Score = 89.7 bits (221), Expect = 5e-16
 Identities = 64/227 (28%), Positives = 100/227 (44%), Gaps = 42/227 (18%)
 Frame = -3

Query: 556 FSHVLQDSITSRDLPTAMAVHTHFIKLAPNGSISLWNQILNFYCQCRRIQHARKLFESMP 377
           ++H  +   + +D+  A  VH H    +PN    L N+ L  Y +C  ++ AR+LF+ MP
Sbjct: 47  YAHFFRHCSSLKDIVAARKVHFHLTTTSPNPPTFLLNRALEAYAKCSSLRDARELFDEMP 106

Query: 376 ERDVVSFNTIISTYSRLRLEIVECTELFSRMQAEGVKPNHITLSALIGAASVGLSASHLV 197
           +RD  S+N +I+ YSRLR    E   LF  M    V+ N +T ++++ A+   +S   L 
Sbjct: 107 QRDGGSWNALITAYSRLRFP-NEALSLFLSMNRSNVRANEVTFASVL-ASCAAVSELPLS 164

Query: 196 ELMHAQAVQYGLSSNEFVGSALVD------------------------------------ 125
           + +H   +++G   N  +GSA VD                                    
Sbjct: 165 QQVHGLVLKFGFCDNVIIGSAFVDVYAKCGVMLDARRMFDEIPLRNAVTWNVIVRRYLDV 224

Query: 124 -----ASNVFSRM-RRKGLPLNSFTLASMTKTCSEPSDLNRGMQLHG 2
                A  +F RM   +  PLN FT ++    CS    L  GMQ+HG
Sbjct: 225 GDAKEAVLMFKRMFSARVRPLN-FTFSNALVACSSRHALEEGMQIHG 270



 Score = 62.0 bits (149), Expect = 1e-07
 Identities = 35/109 (32%), Positives = 60/109 (55%)
 Frame = -3

Query: 451 WNQILNFYCQCRRIQHARKLFESMPERDVVSFNTIISTYSRLRLEIVECTELFSRMQAEG 272
           W  I++ Y    +   ARKLF+ MPER+V+S+N +++ Y+R   +  E  +    M    
Sbjct: 315 WTCIVSGYAMSGKTWEARKLFDEMPERNVISWNAMLAGYTRF-FKWSEALDFVCLMLENV 373

Query: 271 VKPNHITLSALIGAASVGLSASHLVELMHAQAVQYGLSSNEFVGSALVD 125
           +  +H+TLS ++   S GLS   + + +H    ++   SN  VG+AL+D
Sbjct: 374 MDVDHVTLSLMLN-VSAGLSDHEMGKQLHGYVYRHRFHSNLMVGNALLD 421


>ref|XP_006285430.1| hypothetical protein CARUB_v10006847mg [Capsella rubella]
            gi|482554135|gb|EOA18328.1| hypothetical protein
            CARUB_v10006847mg [Capsella rubella]
          Length = 996

 Score = 89.7 bits (221), Expect = 5e-16
 Identities = 60/228 (26%), Positives = 110/228 (48%), Gaps = 40/228 (17%)
 Frame = -3

Query: 568  DLYRFSHVLQDSITSRDLPTAMAVHTHFIKLAPNGSISLWNQILNFYCQCRRIQHARKLF 389
            D   F  VL  ++    L     VH   +KL  +  +++ N ++N YC+ R+I  AR +F
Sbjct: 320  DQVTFILVLATAVRLDSLALGQQVHCLALKLGIDRMLTVANSLINMYCKLRKIGFARTVF 379

Query: 388  ESMPERDVVSFNTIISTYSRLRLEIVECTELFSRMQAEGVKPNHITLSALIGAASVGLSA 209
             +M ERD++S+N++I+ +S+  LE +E   LF ++   G+ P+  T+++++ AAS     
Sbjct: 380  HTMSERDLISWNSVIAGFSQSGLE-MEAVCLFMQLLRYGLTPDQYTMTSILKAASSLPEG 438

Query: 208  SHLVELMHAQAVQYGLSSNEFVGSALVDASN----------------------------- 116
              L + +H  A++    ++ FV +AL+DA +                             
Sbjct: 439  LSLNKQVHVHAIKINNVADSFVSTALIDAYSRNRCMTEAEVLFERSKFDLVAWNAMMSGY 498

Query: 115  -----------VFSRMRRKGLPLNSFTLASMTKTCSEPSDLNRGMQLH 5
                       +F+ M ++G   + FTLA++ KTC     +N+G Q+H
Sbjct: 499  TQSHDGHKTLKLFALMHKQGERSDDFTLATVIKTCGSLFAINQGRQVH 546



 Score = 67.8 bits (164), Expect = 2e-09
 Identities = 42/157 (26%), Positives = 83/157 (52%), Gaps = 7/157 (4%)
 Frame = -3

Query: 544 LQDSITSRDLPTAMAVHTHFIKLAPNGSISLWNQILNFYCQCRRIQHARKLFESMPERDV 365
           L+D+I++ DL      H   +         L N +++ Y +C  + +AR++F+ MPERD+
Sbjct: 51  LRDAISTSDLTLGKCTHARILSSEEIPERFLVNNLISMYSKCGSLTYARRVFDLMPERDL 110

Query: 364 VSFNTIISTYSRLR-----LEIVECTELFSRMQAEGVKPNHITLSALIGAASVGLSASHL 200
           VS+N++++ Y++         I E   LF  ++   V  + +TL+ ++    + L++ ++
Sbjct: 111 VSWNSVLAAYAQFSESASVENIEEAFLLFRTLRQNVVYTSRMTLAPML---KLCLNSGYV 167

Query: 199 --VELMHAQAVQYGLSSNEFVGSALVDASNVFSRMRR 95
              E  H  A + GL  +EFV  ALV+    F ++++
Sbjct: 168 WASESFHGYACKIGLDGDEFVAGALVNIYLKFGQVKQ 204


>ref|XP_004242544.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g02330-like [Solanum lycopersicum]
          Length = 858

 Score = 89.7 bits (221), Expect = 5e-16
 Identities = 50/155 (32%), Positives = 86/155 (55%)
 Frame = -3

Query: 589 IKTQNSIDLYRFSHVLQDSITSRDLPTAMAVHTHFIKLAPNGSISLWNQILNFYCQCRRI 410
           +K++   D + +  VL+     +D  T M +H   IK        + + +++ YC+C ++
Sbjct: 451 LKSRMEPDEFTYGSVLKACAARQDFNTGMVIHNRIIKSGMGLECFIGSAVIDMYCKCEKV 510

Query: 409 QHARKLFESMPERDVVSFNTIISTYSRLRLEIVECTELFSRMQAEGVKPNHITLSALIGA 230
           + A KL E M E+ +VS+N IIS +S L  +  E  + FSRM  EGVKP++ T + ++  
Sbjct: 511 EEAEKLHERMKEQTIVSWNAIISGFS-LCEQSEEAQKFFSRMLEEGVKPDNFTFATVLDT 569

Query: 229 ASVGLSASHLVELMHAQAVQYGLSSNEFVGSALVD 125
            +  L+   L + +HAQ ++  L S+ F+ S LVD
Sbjct: 570 CA-NLATVGLGKQIHAQIIKQELQSDVFITSTLVD 603



 Score = 66.2 bits (160), Expect = 6e-09
 Identities = 51/203 (25%), Positives = 91/203 (44%), Gaps = 41/203 (20%)
 Frame = -3

Query: 487 FIKLAPNGSISLWNQILNFYCQCRRIQHARKLFESMPERDVVSFNTIISTYSRLRLEIVE 308
           F K+    ++S WN ++  Y     +  A+ +F+  PERD +S+N++IS Y + R    +
Sbjct: 82  FDKMPLRDTVS-WNAMIFGYSMVSELDKAQLMFDLTPERDAISWNSLISGYMQNR-NYGK 139

Query: 307 CTELFSRMQAEGVKPNHITLSALIGAASVGLSASHLVELMHAQAVQYGLSSNEFVGSALV 128
             + F  M  +G+  +  T + ++ A S G+  S L   +H   V+ GL+++   GSA+V
Sbjct: 140 SIQTFLEMGRDGIAFDRTTFAVILKACS-GIEDSWLGMQVHGLVVRLGLATDVVTGSAMV 198

Query: 127 -----------------------------------------DASNVFSRMRRKGLPLNSF 71
                                                    D  ++F  M++ G+ ++  
Sbjct: 199 DMYSKCKRLDESICFFNEMPEKNWVSWSALIAGCVQNNKFSDGLHLFKNMQKGGVGVSQS 258

Query: 70  TLASMTKTCSEPSDLNRGMQLHG 2
           T AS+ ++C+  SDL  G QLHG
Sbjct: 259 TYASVFRSCAGLSDLKLGSQLHG 281



 Score = 65.9 bits (159), Expect = 8e-09
 Identities = 41/149 (27%), Positives = 75/149 (50%), Gaps = 1/149 (0%)
 Frame = -3

Query: 568 DLYRFSHVLQDSITSRDLPTAMAVHTHFIKLAPNGSISLWNQILNFYCQCRRIQHARKLF 389
           D + F+ VL        +     +H   IK      + + + +++ Y +C  +Q +R +F
Sbjct: 559 DNFTFATVLDTCANLATVGLGKQIHAQIIKQELQSDVFITSTLVDMYSKCGNMQDSRLMF 618

Query: 388 ESMPERDVVSFNTIISTYSRLRLEIVECTELFSRMQAEGVKPNHITLSALIGA-ASVGLS 212
           E  P++D V++N ++  Y++  L   E  ++F +MQ E V+PNH T  A++ A A +GL 
Sbjct: 619 EKAPKKDFVTWNALVCGYAQHGLG-EEALQIFEKMQLEDVRPNHATFLAVLRACAHIGLV 677

Query: 211 ASHLVELMHAQAVQYGLSSNEFVGSALVD 125
              L +  ++ +  YGL       S +VD
Sbjct: 678 EKGL-QHFNSMSNNYGLDPQLEHYSCMVD 705


>ref|XP_004170671.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g24000, mitochondrial-like [Cucumis sativus]
          Length = 677

 Score = 89.7 bits (221), Expect = 5e-16
 Identities = 56/161 (34%), Positives = 85/161 (52%)
 Frame = -3

Query: 556 FSHVLQDSITSRDLPTAMAVHTHFIKLAPNGSISLWNQILNFYCQCRRIQHARKLFESMP 377
           +S +L      R L    A+H H         + L N ILN Y +C  ++ A+ LF+ MP
Sbjct: 108 YSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQDLFDKMP 167

Query: 376 ERDVVSFNTIISTYSRLRLEIVECTELFSRMQAEGVKPNHITLSALIGAASVGLSASHLV 197
            +D+VS+  +IS YS+   +  E   LF +M   G +PN  TLS+L+ A+  G S  H  
Sbjct: 168 TKDMVSWTVLISGYSQSG-QASEALALFPKMLHLGFQPNEFTLSSLLKASGTGPSDHHGR 226

Query: 196 ELMHAQAVQYGLSSNEFVGSALVDASNVFSRMRRKGLPLNS 74
           +L HA +++YG   N  VGS+L+D    ++ MR   +  NS
Sbjct: 227 QL-HAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNS 266



 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 42/134 (31%), Positives = 69/134 (51%), Gaps = 3/134 (2%)
 Frame = -3

Query: 562 YRFSHVLQDSITSRDLPTAMAVHTHFIKLAPNGSISLWNQILNFYCQCRRIQHARKLFES 383
           + +S VL  + +S  L     VH H IK        + N +++ Y +   I+ A+K+F  
Sbjct: 308 FTYSSVLACA-SSGSLEQGKWVHAHVIKSGGQPIAYIGNTLIDMYAKSGSIKDAKKVFRR 366

Query: 382 MPERDVVSFNTIISTYSRLRLEIVECTELFSRMQAEGVKPNHIT-LSALIGAASVGL--S 212
           + ++D+VS+N+IIS Y++  L   E  +LF +M    V+PN IT LS L   +  GL   
Sbjct: 367 LVKQDIVSWNSIISGYAQHGLG-AEALQLFEQMLKAKVQPNEITFLSVLTACSHSGLLDE 425

Query: 211 ASHLVELMHAQAVQ 170
             +  ELM    ++
Sbjct: 426 GQYYFELMKKHKIE 439


>ref|XP_004139511.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
           mitochondrial-like [Cucumis sativus]
          Length = 678

 Score = 89.7 bits (221), Expect = 5e-16
 Identities = 56/161 (34%), Positives = 85/161 (52%)
 Frame = -3

Query: 556 FSHVLQDSITSRDLPTAMAVHTHFIKLAPNGSISLWNQILNFYCQCRRIQHARKLFESMP 377
           +S +L      R L    A+H H         + L N ILN Y +C  ++ A+ LF+ MP
Sbjct: 108 YSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQDLFDKMP 167

Query: 376 ERDVVSFNTIISTYSRLRLEIVECTELFSRMQAEGVKPNHITLSALIGAASVGLSASHLV 197
            +D+VS+  +IS YS+   +  E   LF +M   G +PN  TLS+L+ A+  G S  H  
Sbjct: 168 TKDMVSWTVLISGYSQSG-QASEALALFPKMLHLGFQPNEFTLSSLLKASGTGPSDHHGR 226

Query: 196 ELMHAQAVQYGLSSNEFVGSALVDASNVFSRMRRKGLPLNS 74
           +L HA +++YG   N  VGS+L+D    ++ MR   +  NS
Sbjct: 227 QL-HAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNS 266



 Score = 60.1 bits (144), Expect = 5e-07
 Identities = 41/134 (30%), Positives = 67/134 (50%), Gaps = 3/134 (2%)
 Frame = -3

Query: 562 YRFSHVLQDSITSRDLPTAMAVHTHFIKLAPNGSISLWNQILNFYCQCRRIQHARKLFES 383
           + +S V     +S  L     VH H IK        + N +++ Y +   I+ A+K+F  
Sbjct: 308 FTYSSVFTACASSGSLEQGKWVHAHVIKSGGQPIAYIGNTLIDMYAKSGSIKDAKKVFRR 367

Query: 382 MPERDVVSFNTIISTYSRLRLEIVECTELFSRMQAEGVKPNHIT-LSALIGAASVGL--S 212
           + ++D+VS+N+IIS Y++  L   E  +LF +M    V+PN IT LS L   +  GL   
Sbjct: 368 LVKQDIVSWNSIISGYAQHGLG-AEALQLFEQMLKAKVQPNEITFLSVLTACSHSGLLDE 426

Query: 211 ASHLVELMHAQAVQ 170
             +  ELM    ++
Sbjct: 427 GQYYFELMKKHKIE 440


>gb|ABR17838.1| unknown [Picea sitchensis]
          Length = 795

 Score = 89.7 bits (221), Expect = 5e-16
 Identities = 62/207 (29%), Positives = 96/207 (46%), Gaps = 41/207 (19%)
 Frame = -3

Query: 499 VHTHFIKLAPNGSISLWNQILNFYCQCRRIQHARKLFESMPERDVVSFNTIISTYSRLRL 320
           +H + I+      + + N ++N Y +C  +  A KLFE MP RDV S+N II  YS L  
Sbjct: 243 IHCYAIRSGIESDVLVVNGLVNMYAKCGNVNTAHKLFERMPIRDVASWNAIIGGYS-LNS 301

Query: 319 EIVECTELFSRMQAEGVKPNHITLSALIGAASVGLSASHLVELMHAQAVQYGLSSNEFVG 140
           +  E    F+RMQ  G+KPN IT+ +++ A +  L A    + +H  A++ G  SN+ VG
Sbjct: 302 QHHEALAFFNRMQVRGIKPNSITMVSVLPACA-HLFALEQGQQIHGYAIRSGFESNDVVG 360

Query: 139 SALVD----------ASNVFSRMRRK-------------------------------GLP 83
           +ALV+          A  +F RM +K                               G+ 
Sbjct: 361 NALVNMYAKCGNVNSAYKLFERMPKKNVVAWNAIISGYSQHGHPHEALALFIEMQAQGIK 420

Query: 82  LNSFTLASMTKTCSEPSDLNRGMQLHG 2
            +SF + S+   C+    L +G Q+HG
Sbjct: 421 PDSFAIVSVLPACAHFLALEQGKQIHG 447



 Score = 82.4 bits (202), Expect = 9e-14
 Identities = 60/226 (26%), Positives = 101/226 (44%), Gaps = 41/226 (18%)
 Frame = -3

Query: 556 FSHVLQDSITSRDLPTAMAVHTHFIKLAPNGSISLWNQILNFYCQCRRIQHARKLFESMP 377
           F  V++   +  DL     VH   I       + +   + + Y +C  +++AR++F+ MP
Sbjct: 123 FLSVIKACGSQSDLQAGRKVHEDIIARGFESDVIVGTALASMYTKCGSLENARQVFDRMP 182

Query: 376 ERDVVSFNTIISTYSRLRLEIVECTELFSRMQAEGVKPNHITLSALIGAASVGLSASHLV 197
           +RDVVS+N II+ YS+   +  E   LFS MQ  G+KPN  TL +++   +  L A    
Sbjct: 183 KRDVVSWNAIIAGYSQ-NGQPYEALALFSEMQVNGIKPNSSTLVSVMPVCA-HLLALEQG 240

Query: 196 ELMHAQAVQYGLSSNEFVGSALV------------------------------------- 128
           + +H  A++ G+ S+  V + LV                                     
Sbjct: 241 KQIHCYAIRSGIESDVLVVNGLVNMYAKCGNVNTAHKLFERMPIRDVASWNAIIGGYSLN 300

Query: 127 ----DASNVFSRMRRKGLPLNSFTLASMTKTCSEPSDLNRGMQLHG 2
               +A   F+RM+ +G+  NS T+ S+   C+    L +G Q+HG
Sbjct: 301 SQHHEALAFFNRMQVRGIKPNSITMVSVLPACAHLFALEQGQQIHG 346



 Score = 72.0 bits (175), Expect = 1e-10
 Identities = 42/131 (32%), Positives = 71/131 (54%)
 Frame = -3

Query: 517 LPTAMAVHTHFIKLAPNGSISLWNQILNFYCQCRRIQHARKLFESMPERDVVSFNTIIST 338
           L     +H + I+     +  + N ++N Y +C  +  A KLFE MP+++VV++N IIS 
Sbjct: 338 LEQGQQIHGYAIRSGFESNDVVGNALVNMYAKCGNVNSAYKLFERMPKKNVVAWNAIISG 397

Query: 337 YSRLRLEIVECTELFSRMQAEGVKPNHITLSALIGAASVGLSASHLVELMHAQAVQYGLS 158
           YS+      E   LF  MQA+G+KP+   + +++ A +  L+     ++ H   ++ G  
Sbjct: 398 YSQ-HGHPHEALALFIEMQAQGIKPDSFAIVSVLPACAHFLALEQGKQI-HGYTIRSGFE 455

Query: 157 SNEFVGSALVD 125
           SN  VG+ LVD
Sbjct: 456 SNVVVGTGLVD 466



 Score = 62.4 bits (150), Expect = 9e-08
 Identities = 37/125 (29%), Positives = 63/125 (50%)
 Frame = -3

Query: 499 VHTHFIKLAPNGSISLWNQILNFYCQCRRIQHARKLFESMPERDVVSFNTIISTYSRLRL 320
           +H + I+     ++ +   +++ Y +C  +  A+KLFE MPE+DVVS+ T+I  Y  +  
Sbjct: 445 IHGYTIRSGFESNVVVGTGLVDIYAKCGNVNTAQKLFERMPEQDVVSWTTMILAYG-IHG 503

Query: 319 EIVECTELFSRMQAEGVKPNHITLSALIGAASVGLSASHLVELMHAQAVQYGLSSNEFVG 140
              +   LFS+MQ  G K +HI  +A++ A S        ++        YGL+      
Sbjct: 504 HGEDALALFSKMQETGTKLDHIAFTAILTACSHAGLVDQGLQYFQCMKSDYGLAPKLEHY 563

Query: 139 SALVD 125
           + LVD
Sbjct: 564 ACLVD 568


>ref|XP_007217844.1| hypothetical protein PRUPE_ppa024283mg [Prunus persica]
           gi|462413994|gb|EMJ19043.1| hypothetical protein
           PRUPE_ppa024283mg [Prunus persica]
          Length = 717

 Score = 89.0 bits (219), Expect = 9e-16
 Identities = 52/148 (35%), Positives = 82/148 (55%)
 Frame = -3

Query: 568 DLYRFSHVLQDSITSRDLPTAMAVHTHFIKLAPNGSISLWNQILNFYCQCRRIQHARKLF 389
           D   F+ +L            + VH+H +KL  + ++ + N +L+ YC+  R+  A +LF
Sbjct: 40  DYVTFATLLSGCSDMETTKQVVQVHSHILKLGYHSTLMVCNSLLDSYCKSHRLDLACRLF 99

Query: 388 ESMPERDVVSFNTIISTYSRLRLEIVECTELFSRMQAEGVKPNHITLSALIGAASVGLSA 209
           + MPERD V+FN +I+ YS+  L   E   LF++MQ  G KP+  T +AL+  A +GL  
Sbjct: 100 KEMPERDNVTFNALITGYSKDGLN-EEAINLFAQMQNLGYKPSEFTFAALL-CAGIGLYD 157

Query: 208 SHLVELMHAQAVQYGLSSNEFVGSALVD 125
               + +H   V+    SN FVG+AL+D
Sbjct: 158 IAFGQQVHGFVVKTNFVSNVFVGNALLD 185



 Score = 76.3 bits (186), Expect = 6e-12
 Identities = 45/150 (30%), Positives = 79/150 (52%), Gaps = 2/150 (1%)
 Frame = -3

Query: 568 DLYRFSHVLQDSITSRDLPTAMA--VHTHFIKLAPNGSISLWNQILNFYCQCRRIQHARK 395
           D  +F +    SI S  L   M   +H+  I    +  I + N +++ Y +C R + A++
Sbjct: 240 DRKQFPYATMLSIASNTLNLNMGRQIHSQAIVATADSEIQVGNSLVDMYAKCGRFEEAKR 299

Query: 394 LFESMPERDVVSFNTIISTYSRLRLEIVECTELFSRMQAEGVKPNHITLSALIGAASVGL 215
           +F  + +R  V +  IIS Y +  L   E  ELF+ M+   V P+  T ++++  AS  L
Sbjct: 300 IFARLADRSAVPWTAIISAYVQNGLH-EEALELFNEMRRANVSPDQATFASIL-RASANL 357

Query: 214 SASHLVELMHAQAVQYGLSSNEFVGSALVD 125
           ++  L + +H+  ++ G +SN F GSAL+D
Sbjct: 358 ASLSLGKQLHSSVIRLGFASNVFAGSALLD 387


>ref|XP_002525227.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223535524|gb|EEF37193.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 420

 Score = 89.0 bits (219), Expect = 9e-16
 Identities = 61/212 (28%), Positives = 95/212 (44%), Gaps = 41/212 (19%)
 Frame = -3

Query: 517 LPTAMAVHTHFIKLAPNGSISLWNQILNFYCQCRRIQHARKLFESMPERDVVSFNTIIST 338
           L     VH H +       + + N ILN Y +C  +  ARK+F+ MP +DVV++  +I+ 
Sbjct: 97  LKEGQLVHAHLLNSRFKHDLVIQNTILNMYAKCGNLGEARKVFDQMPVKDVVTWTALITG 156

Query: 337 YSRLRLEIVECTELFSRMQAEGVKPNHITLSALIGAASVGLSASHLVELMHAQAVQYGLS 158
           YS+      +   LF +M   G +PNH TLS+L+ A+ V  S S+   L+HA  ++YG S
Sbjct: 157 YSQ-HDRPKDALLLFPQMLTLGFRPNHFTLSSLLKASGVSPSDSN-GRLLHAFCIKYGYS 214

Query: 157 SNEFVGSALVD-----------------------------------------ASNVFSRM 101
            N +VGSAL+D                                         A + FS+M
Sbjct: 215 CNVYVGSALLDMYARSGHLEEALFIFDGLPSRNEVSWNALIAGCARKGDQELAFSFFSKM 274

Query: 100 RRKGLPLNSFTLASMTKTCSEPSDLNRGMQLH 5
            R+ +    FT + +   C+    L +G  +H
Sbjct: 275 LRENIQPTQFTYSIVLSACASIGSLEQGKWVH 306