BLASTX nr result

ID: Sinomenium22_contig00038882 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium22_contig00038882
         (749 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_680600.1| uncharacterized protein [Arabidopsis thaliana] ...    58   4e-06
ref|XP_006374145.1| hypothetical protein POPTR_0015s02632g [Popu...    57   7e-06

>ref|NP_680600.1| uncharacterized protein [Arabidopsis thaliana]
           gi|332657078|gb|AEE82478.1| uncharacterized protein
           AT4G05095 [Arabidopsis thaliana]
          Length = 138

 Score = 57.8 bits (138), Expect = 4e-06
 Identities = 39/135 (28%), Positives = 59/135 (43%)
 Frame = -2

Query: 736 CMFCWTGVEYDNHIFFKCSFSYSVWSAIRRRCSLSAISSFKWGKQVDWILKERGNDVTAG 557
           C+ C    E+  H+FF C  S++VW     R SL+    F     + W+L     D    
Sbjct: 12  CVLCSGNAEFREHLFFGCGVSFAVWGNFMFRASLTPPLLFM--DCLTWVLSP-SRDPNIS 68

Query: 556 IIAQLAF*PTICHLWAERNMRLFQRKGRSTDSLSNFHVFISISTVQTVELPFLPKTEKAR 377
           +I +L F  +I  LW ERN RL     RS+ +     +   I  + T +L  L +  +  
Sbjct: 69  LIIKLVFQASIYFLWKERNRRLHDHASRSSTA-----IIKEIKVILTAKLDPLSRRSEFD 123

Query: 376 ALQPKILHFFFFIFN 332
           A    +L  +F  FN
Sbjct: 124 APDNSLLSTWFRYFN 138


>ref|XP_006374145.1| hypothetical protein POPTR_0015s02632g [Populus trichocarpa]
           gi|550321817|gb|ERP51942.1| hypothetical protein
           POPTR_0015s02632g [Populus trichocarpa]
          Length = 175

 Score = 57.0 bits (136), Expect = 7e-06
 Identities = 26/95 (27%), Positives = 47/95 (49%)
 Frame = -2

Query: 736 CMFCWTGVEYDNHIFFKCSFSYSVWSAIRRRCSLSAISSFKWGKQVDWILKERGNDVTAG 557
           C  C    E  NH+FF+CS++ ++W  +  RC +  ++   W + + W            
Sbjct: 46  CSLCLRNNEDHNHLFFECSYTKAIWWDVCDRCDIPRMTK-GWDEWIRWATVSWHGKSFVN 104

Query: 556 IIAQLAF*PTICHLWAERNMRLFQRKGRSTDSLSN 452
              +L+F  T+ H+W ERN R+F    R+++ + N
Sbjct: 105 FSRKLSFAATVYHVWQERNARIFAGLSRTSNLVFN 139


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